View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF17682_high_22 (Length: 251)
Name: NF17682_high_22
Description: NF17682
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17682_high_22 |
 | |
|
| [»] scaffold0022 (1 HSPs) |
| | |
|
| [»] scaffold0016 (1 HSPs) |
| | |
|
| [»] scaffold0028 (2 HSPs) |
| | |
|
| [»] scaffold0259 (1 HSPs) |
| | |
|
Alignment Details
Target: chr1 (Bit Score: 213; Significance: 1e-117; HSPs: 5)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 13380321 - 13380077
Alignment:
| Q |
1 |
tgaatttgatatgcttcttgattcatggatgagtgaaaagatttattatgttttattctttttcttgtagttgataattatatgaattggtgagttgcaa |
100 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13380321 |
tgaatttgatatacttcttgattcatggatgagtgaaaagatttattatgttttattaattttcttgtagttgataattatatgaattggtgagttgcaa |
13380222 |
T |
|
| Q |
101 |
ttttgttaaagtatgtgatttgatgaatgtgtgaatctttatgttttcttatttatgcaatgagaaatgttgtcgagttaaagtgattttcgttgtatat |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||| |||||||||||||| || ||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
13380221 |
ttttgttaaagtatgtgatttgatgaatgtgtaaatcttgatgttttcttatttgtgtaatgagaaatgttgttgagttaaagtgattttcgttgtatat |
13380122 |
T |
|
| Q |
201 |
gtggttgtgttaaagtttactgattttgaagtttagtgatgatgt |
245 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13380121 |
gtggttgtgttaaagtttactgattttgaagtttagtgatgatgt |
13380077 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 51443626 - 51443383
Alignment:
| Q |
1 |
tgaatttgatatgcttcttgattca-tggatgagtgaaaagatttattatgttttattctttttcttgtagttgataattatatgaattggtgagttgca |
99 |
Q |
| |
|
||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
51443626 |
tgaatttgatatgcttcttgatttaatggatgagtgaaaagatttattatgttttattaattttcttgtagttgataattatatgaattggtgagttgca |
51443527 |
T |
|
| Q |
100 |
attttgttaaagtatgtgatttgatgaatgtgtgaatctttatgttttcttatttatgcaatgagaaatgttgtcgagttaaagtgattttcgttgtata |
199 |
Q |
| |
|
||||||||||||||||||||||| ||||||||| |||||| |||||||||||||| |||| ||||||||||||| |||||||| ||| ||||||||||| |
|
|
| T |
51443526 |
attttgttaaagtatgtgatttgttgaatgtgtaaatcttgatgttttcttatttgtgcagtgagaaatgttgttgagttaaa-tga-tttcgttgtatt |
51443429 |
T |
|
| Q |
200 |
tgtggttgtgttaaagtttactgattttgaagtttagtgatgatgt |
245 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
51443428 |
tgtggttgtgttaaagtttactgattttgaagtatagtgatgatgt |
51443383 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 40 - 245
Target Start/End: Complemental strand, 8311247 - 8311041
Alignment:
| Q |
40 |
gatttattatgttttattctttttcttgtagttgataattatatgaattggtgagttgcaattttgttaaagtatgtgatttgatgaatgtgtgaatctt |
139 |
Q |
| |
|
|||||||||||||| ||| ||||||||||||| ||||||||| ||||||||| |||||||| |||||||||||||||||||||||||||||| |||||| |
|
|
| T |
8311247 |
gatttattatgtttgattaattttcttgtagttaataattataagaattggtgggttgcaatcttgttaaagtatgtgatttgatgaatgtgtaaatctt |
8311148 |
T |
|
| Q |
140 |
tatgttttcttatttatgcaatgagaaatgttgtcgagttaaagtgattttcgttgtatatgtggttgtgttaaagtttactgattttgaag-tttagtg |
238 |
Q |
| |
|
|||||||||||||| |||||||||||||||||| |||||||||||||||| | ||| || ||||| ||||||||||||||||||| | ||| ||||||| |
|
|
| T |
8311147 |
gatgttttcttatttgtgcaatgagaaatgttgttgagttaaagtgatttttgatgtgtacgtggtggtgttaaagtttactgattataaagttttagtg |
8311048 |
T |
|
| Q |
239 |
atgatgt |
245 |
Q |
| |
|
||||||| |
|
|
| T |
8311047 |
atgatgt |
8311041 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 4 - 128
Target Start/End: Complemental strand, 31654672 - 31654547
Alignment:
| Q |
4 |
atttgatatgcttcttgattca-tggatgagtgaaaagatttattatgttttattctttttcttgtagttgataattatatgaattggtgagttgcaatt |
102 |
Q |
| |
|
|||||||||||||||||||| | |||||||||||||||||||||| ||||||||| ||||||||||||||| |||||||| ||||||||||||||||||| |
|
|
| T |
31654672 |
atttgatatgcttcttgatttaatggatgagtgaaaagatttattgtgttttattatttttcttgtagttgctaattataagaattggtgagttgcaatt |
31654573 |
T |
|
| Q |
103 |
ttgttaaagtatgtgatttgatgaat |
128 |
Q |
| |
|
|||||| || |||||||||||||||| |
|
|
| T |
31654572 |
ttgttagagcatgtgatttgatgaat |
31654547 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 98 - 153
Target Start/End: Complemental strand, 24302924 - 24302869
Alignment:
| Q |
98 |
caattttgttaaagtatgtgatttgatgaatgtgtgaatctttatgttttcttatt |
153 |
Q |
| |
|
||||||||| |||||||||||||| |||||||||| |||||| ||| || |||||| |
|
|
| T |
24302924 |
caattttgtaaaagtatgtgatttcatgaatgtgtaaatcttgatgattgcttatt |
24302869 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 211; Significance: 1e-116; HSPs: 7)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 40888790 - 40888548
Alignment:
| Q |
1 |
tgaatttgatatgcttcttgattcatggatgagtgaaaagatttattatgttttattctttttcttgtagttgataattatatgaattggtgagttgcaa |
100 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
40888790 |
tgaatttaatatgcttcttgattcatggatgagtgaaaagatttattatattttattaattttcttgtagttgataattatatgaattggtgagttgcaa |
40888691 |
T |
|
| Q |
101 |
ttttgttaaagtatgtgatttgatgaatgtgtgaatctttatgttttcttatttatgcaatgagaaatgttgtcgagttaaagtgattttcgttgtatat |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |
|
|
| T |
40888690 |
ttttgttaaagtatgtgatttgatgaatgtgtaaatcttgatgttttcttatttatgcaatgagaaatgctgttgagttaaagtgattttcgttgtatat |
40888591 |
T |
|
| Q |
201 |
gtggttgtgttaaagtttactgattttgaagtttagtgatgat |
243 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
40888590 |
gtggttgtgttaaagtttactgattttgaagtttagtgatgat |
40888548 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 29453702 - 29453947
Alignment:
| Q |
1 |
tgaatttgatatgcttcttgattcatggatgagtgaaaagatttattatgtttt-attctttttcttgtagttgataattatatgaattggtgagttgca |
99 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29453702 |
tgaatttgatatgcttcttgattcatggatgagtgaaaagatttattatgtttttattaattttcttgtagttgataattatatgaattggtgagttgca |
29453801 |
T |
|
| Q |
100 |
attttgttaaagtatgtgatttgatgaatgtgtgaatctttatgttttcttatttatgcaatgagaaatgttgtcgagttaaagtgattttcgttgtata |
199 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||| |||||||||||||| |||||||||||||||||| |||||| |||||||||| ||||||| |
|
|
| T |
29453802 |
attttgttaaagtatgtgatttgatgaatgtgtaaatcttgatgttttcttatttgtgcaatgagaaatgttgttgagttagagtgattttctttgtata |
29453901 |
T |
|
| Q |
200 |
tgtggttgtgttaaagtttactgattttgaagtttagtgatgatgt |
245 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
29453902 |
tgtggttgtgttaaagtttactgattttgaagtttagtgatcatgt |
29453947 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 15990270 - 15990079
Alignment:
| Q |
1 |
tgaatttgatatgcttcttgattca-tggatgagtgaaaagatttattatgttttattctttttcttgtagttgataattatatgaattggtgagttgca |
99 |
Q |
| |
|
||||||||||||||||||||||| | |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||| |||||| |
|
|
| T |
15990270 |
tgaatttgatatgcttcttgatttaatggatgagtgaaaagaattattatgttttattaattttcttgtagttgataattataagaattggtgggttgca |
15990171 |
T |
|
| Q |
100 |
attttgttaaagtatgtgatttgatgaatgtgtgaatctttatgttttcttatttatgcaatgagaaatgttgtcgagttaaagtgattttc |
191 |
Q |
| |
|
|| |||||||||||||||||||||||||||||| |||||| |||||||||||||| |||||||||||||||||| ||||||||||||||||| |
|
|
| T |
15990170 |
atcttgttaaagtatgtgatttgatgaatgtgtaaatcttgatgttttcttatttgtgcaatgagaaatgttgttgagttaaagtgattttc |
15990079 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 71 - 139
Target Start/End: Complemental strand, 19544673 - 19544605
Alignment:
| Q |
71 |
ttgataattatatgaattggtgagttgcaattttgttaaagtatgtgatttgatgaatgtgtgaatctt |
139 |
Q |
| |
|
||||||| |||| ||||| |||||||||||||||||||||||||||||||||| |||||||| |||||| |
|
|
| T |
19544673 |
ttgataaatataagaatttgtgagttgcaattttgttaaagtatgtgatttgaagaatgtgtaaatctt |
19544605 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 139
Target Start/End: Complemental strand, 52641377 - 52641309
Alignment:
| Q |
71 |
ttgataattatatgaattggtgagttgcaattttgttaaagtatgtgatttgatgaatgtgtgaatctt |
139 |
Q |
| |
|
||||||| |||| ||||| |||| |||||||||||||||| || |||||||||||||| |||||||||| |
|
|
| T |
52641377 |
ttgataaatataagaatttgtgaattgcaattttgttaaaatacgtgatttgatgaatatgtgaatctt |
52641309 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 52641432 - 52641386
Alignment:
| Q |
1 |
tgaatttgatatgcttcttgattca-tggatgagtgaaaagatttat |
46 |
Q |
| |
|
||||||||||||||||||||| ||| ||||||||||||||||||||| |
|
|
| T |
52641432 |
tgaatttgatatgcttcttgactcaatggatgagtgaaaagatttat |
52641386 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 49
Target Start/End: Complemental strand, 19544756 - 19544712
Alignment:
| Q |
6 |
ttgatatgcttcttgattc-atggatgagtgaaaagatttattat |
49 |
Q |
| |
|
||||||||||| ||||||| ||||||||||||||||||||||||| |
|
|
| T |
19544756 |
ttgatatgcttattgattcgatggatgagtgaaaagatttattat |
19544712 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 202; Significance: 1e-110; HSPs: 9)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 9745178 - 9745423
Alignment:
| Q |
1 |
tgaatttgatatgcttcttgattca-tggatgagtgaaaagatttattatgttttattctttttcttgtagttgataattatatgaattggtgagttgca |
99 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9745178 |
tgaatttgatatgcttcttgattcaatggatgagtgaaaatatttattgtgttttattatttttcttgtagttgataattatatgaattggtgagttgca |
9745277 |
T |
|
| Q |
100 |
attttgttaaagtatgtgatttgatgaatgtgtgaatctttatgttttcttatttatgcaatgagaaatgttgtcgagttaaagtgattttcgttgtata |
199 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||| |||||||||||||| |||||||||||||||||| |||||||||||||| |||||||||| |
|
|
| T |
9745278 |
attttgttaaagtatgtgatttgatgaatgtgtaaatcttgatgttttcttatttgtgcaatgagaaatgttgttgagttaaagtgattctcgttgtata |
9745377 |
T |
|
| Q |
200 |
tgtggttgtgttaaagtttactgattttgaagtttagtgatgatgt |
245 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9745378 |
tgtggctgtgttaaagtttactgattttgaagtttagtgatgatgt |
9745423 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 59 - 234
Target Start/End: Complemental strand, 10529572 - 10529397
Alignment:
| Q |
59 |
tttttcttgtagttgataattatatgaattggtgagttgcaattttgttaaagtatgtgatttgatgaatgtgtgaatctttatgttttcttatttatgc |
158 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||| ||| |
|
|
| T |
10529572 |
ttttttttgtagttgataattatatgaattggtgagttgcaattttgttaaagtatgtgatttgatgaatgtgtaaatcttgatgttttcttatttgtgc |
10529473 |
T |
|
| Q |
159 |
aatgagaaatgttgtcgagttaaagtgattttcgttgtatatgtggttgtgttaaagtttactgattttgaagttt |
234 |
Q |
| |
|
||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| ||||| | |||||| |
|
|
| T |
10529472 |
aatgagaaatgttgttgagttaaagtgattttagttgtatatgtggttgtgttaaagtttagtgattataaagttt |
10529397 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 8311785 - 8311993
Alignment:
| Q |
1 |
tgaatttgatatgcttcttgattc-atggatgagtgaaaagatttattatgtttt-attctttttctt-gtagttgataattatatgaattggtgagttg |
97 |
Q |
| |
|
||||||||| |||||||||||||| ||||||| |||||||||||||||||||||| ||| ||||||| |||||||||||||||| |||||||||| ||| |
|
|
| T |
8311785 |
tgaatttgacatgcttcttgattcgatggatgggtgaaaagatttattatgtttttattacttttctttgtagttgataattataagaattggtgatttg |
8311884 |
T |
|
| Q |
98 |
caattttgttaaagtatgtgatttgatgaatgtgtgaatctttatgttttcttatttatgcaatgagaaatgttgtcgagttaaagtgattttcgttgta |
197 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||| || ||| ||||||| || || ||||||||||||||| || ||||||||||||| ||||| |
|
|
| T |
8311885 |
caattttgttaaagtatgtgatttgatgaatgttgaaatattgatgatttcttaattgtgaaatgagaaatgttgtggaattaaagtgatttttgttgtg |
8311984 |
T |
|
| Q |
198 |
tatgtggtt |
206 |
Q |
| |
|
||||||||| |
|
|
| T |
8311985 |
tatgtggtt |
8311993 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 29587629 - 29587762
Alignment:
| Q |
1 |
tgaatttgatatgcttcttgattca-tggatgagtgaaaa-gatttattatgttttattctttttcttgtagttgataattatatgaattggtgagttgc |
98 |
Q |
| |
|
||||||||||||||||||||||| | |||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29587629 |
tgaatttgatatgcttcttgatttaatggatgagtgaaaaagatttattatgttttattaattttcttgtagttgataattatatgaattggtgagttgc |
29587728 |
T |
|
| Q |
99 |
aattttgttaaagtatgtgatttgatgaatgtgt |
132 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
29587729 |
aattttgttaaagtatgtgatttgatgaatgtgt |
29587762 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 10530241 - 10530113
Alignment:
| Q |
1 |
tgaatttgatatgcttcttgattca-tggatgagtgaaaagatttattatgttttattctttttcttgtagttgataattatatgaattggtgagttgca |
99 |
Q |
| |
|
||||||||||||||||||||||| | ||||||||||||||||||||| ||||||||| ||||||||||||||| |||||||| |||||||||||||||| |
|
|
| T |
10530241 |
tgaatttgatatgcttcttgatttaatggatgagtgaaaagatttatcgtgttttattatttttcttgtagttgctaattataagaattggtgagttgca |
10530142 |
T |
|
| Q |
100 |
attttgttaaagtatgtgatttgatgaat |
128 |
Q |
| |
|
||||||||| || |||||||||||||||| |
|
|
| T |
10530141 |
attttgttagagcatgtgatttgatgaat |
10530113 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 13167938 - 13168007
Alignment:
| Q |
1 |
tgaatttgatatgcttcttgattca-tggatgagtgaaaagatttattatgttttattctttttcttgta |
69 |
Q |
| |
|
||||||||||||||||||||||| | |||||||| ||||||||||||| ||||||||| |||| |||||| |
|
|
| T |
13167938 |
tgaatttgatatgcttcttgatttaatggatgagggaaaagatttattgtgttttattattttgcttgta |
13168007 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 205 - 245
Target Start/End: Original strand, 17855194 - 17855234
Alignment:
| Q |
205 |
ttgtgttaaagtttactgattttgaagtttagtgatgatgt |
245 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
17855194 |
ttgtgttaaagtttactgattttgaagtttaatgatgatgt |
17855234 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 46002844 - 46002801
Alignment:
| Q |
1 |
tgaatttgatatgcttcttgattc-atggatgagtgaaaagatt |
43 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
46002844 |
tgaatttgatatgcttcttgattcaatggatgagtgaaaagatt |
46002801 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 245
Target Start/End: Original strand, 13168039 - 13168137
Alignment:
| Q |
140 |
tatgttttcttatttatgcaatgagaaatgttgtcgagttaaagtgattttcgttgtatatgtggttgtgttaaagtttactgattttgaa-gtttagtg |
238 |
Q |
| |
|
|||| |||||||||| || ||||||||||||||| || ||||||||||||| || |||| ||||||||||||||||||||| |||| |||||||| |
|
|
| T |
13168039 |
tatgatttcttatttgtgaaatgagaaatgttgttgaattaaagtgatttt-----ta-atgt--ttgtgttaaagtttactgattatgaaggtttagtg |
13168130 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0022 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: scaffold0022
Description:
Target: scaffold0022; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 2077 - 2321
Alignment:
| Q |
1 |
tgaatttgatatgcttcttgattca-tggatgagtgaaaagatttattatgttttattctttttcttgtagttgataattatatgaattggtgagttgca |
99 |
Q |
| |
|
||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
2077 |
tgaatttgatatgcttcttgatttaatggatgagtgaaaagatttattatgttttattaattttcttgtagttgataattatatgaattggtgacttgca |
2176 |
T |
|
| Q |
100 |
attttgttaaagtatgtgatttgatgaatgtgtgaatctttatgttttcttatttatgcaatgagaaatgttgtcgagttaaagtgattttcgttgtata |
199 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||| |||||||||||||| |||||||||||||||||| |||||||||||| |||||||||||| |
|
|
| T |
2177 |
attttgttaaagtatgtgatttgatgaatgtgtaaatcttgatgttttcttatttgtgcaatgagaaatgttgttgagttaaagtga-tttcgttgtata |
2275 |
T |
|
| Q |
200 |
tgtggttgtgttaaagtttactgattttgaagtttagtgatgatgt |
245 |
Q |
| |
|
| ||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
2276 |
tatggttgtgttaaagtttactgattttgaagtatagtgatgatgt |
2321 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 188; Significance: 1e-102; HSPs: 6)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 16131181 - 16130942
Alignment:
| Q |
1 |
tgaatttgatatgcttcttgattcatggatgagtgaaaagatttattatgttttattctttttcttgtagttgataattatatgaattggtgagttgcaa |
100 |
Q |
| |
|
|||||| || |||||||||||||||| |||||||||||||||||| ||| ||||||| |||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
16131181 |
tgaattcgacatgcttcttgattcatagatgagtgaaaagatttactatattttattaatttttttgtagttgataattatatgaattggtgagttgcaa |
16131082 |
T |
|
| Q |
101 |
ttttgttaaagtatgtgatttgatgaatgtgtgaatctttatgttttcttatttatgcaatgagaaatgttgtcgagttaaagtgattttcgttgtatat |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||| |||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
16131081 |
ttttgttaaagtatgtgatttgatgaatgtgtaaatcttgatgttttcttatttgtgcaatgagaaatgttgttgagttaaagtgattttcgttgtatat |
16130982 |
T |
|
| Q |
201 |
gtggttgtgttaaagtttactgattttgaagtttagtgat |
240 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
16130981 |
gtggttgtgttacagtttactgattttgaagtttagtgat |
16130942 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 27977251 - 27977007
Alignment:
| Q |
1 |
tgaatttgatatgcttcttgattca-tggatgagtgaaaagatttattatgttttattctttttcttgtagttgataattatatgaattggtgagttgca |
99 |
Q |
| |
|
||||||||||||||||||||||| | |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
27977251 |
tgaatttgatatgcttcttgatttaatggatgagtgaaaagatttattatgtttcattaattttcttgtagttgataattatatgaatttgtgagttgca |
27977152 |
T |
|
| Q |
100 |
attttgttaaagtatgtgatttgatgaatgtgtgaatctttatgttttcttatttatgcaatgagaaatgttgtcgagttaaagtgattttcgttgtata |
199 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||| |||||||||||||| |||||||||||||||||| |||||||||||| |||||||||||| |
|
|
| T |
27977151 |
attttgttaaagtatgtgatttgatgaatgtgtaaatcttgatgttttcttatttgtgcaatgagaaatgttgttgagttaaagtga-tttcgttgtata |
27977053 |
T |
|
| Q |
200 |
tgtggttgtgttaaagtttactgattttgaagtttagtgatgatgt |
245 |
Q |
| |
|
||||||||||||||||||||||||||||||||| || ||||||||| |
|
|
| T |
27977052 |
tgtggttgtgttaaagtttactgattttgaagtataatgatgatgt |
27977007 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 28063779 - 28063535
Alignment:
| Q |
1 |
tgaatttgatatgcttcttgattca-tggatgagtgaaaagatttattatgttttattctttttcttgtagttgataattatatgaattggtgagttgca |
99 |
Q |
| |
|
||||||||||||||||||||||| | |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
28063779 |
tgaatttgatatgcttcttgatttaatggatgagtgaaaagatttattatgtttcattaattttcttgtagttgataattatatgaatttgtgagttgca |
28063680 |
T |
|
| Q |
100 |
attttgttaaagtatgtgatttgatgaatgtgtgaatctttatgttttcttatttatgcaatgagaaatgttgtcgagttaaagtgattttcgttgtata |
199 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||| |||||||||||||| |||||||||||||||||| |||||||||||| |||||||||||| |
|
|
| T |
28063679 |
attttgttaaagtatgtgatttgatgaatgtgtaaatcttgatgttttcttatttgtgcaatgagaaatgttgttgagttaaagtga-tttcgttgtata |
28063581 |
T |
|
| Q |
200 |
tgtggttgtgttaaagtttactgattttgaagtttagtgatgatgt |
245 |
Q |
| |
|
||||||||||||||||||||||||||||||||| || ||||||||| |
|
|
| T |
28063580 |
tgtggttgtgttaaagtttactgattttgaagtataatgatgatgt |
28063535 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 25 - 245
Target Start/End: Original strand, 22403839 - 22404060
Alignment:
| Q |
25 |
atggatgagtgaaaagatttattatgttttattctttttcttgtagttgataattatatgaattggtgagttgcaattttgttaaagtatgtgatttgat |
124 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||| |||| ||||||||| ||||||||| |||||||| |||| ||||||||||||||||| |
|
|
| T |
22403839 |
atggatgagtgaaaagatttattatgttttattaattttcttgaagttaataattataagaattggtgggttgcaatcttgtaaaagtatgtgatttgat |
22403938 |
T |
|
| Q |
125 |
gaatgtgtgaatctttatgttttcttatttatgcaatgagaaatgttgtcgagttaaagtgattttcgttgtatatgtggttgtgttaaagtttactgat |
224 |
Q |
| |
|
|||||||| |||||| | ||||||||||| |||||||||||||||||| |||||||||||||||||| | | ||| ||||||||||||||||||||||| |
|
|
| T |
22403939 |
gaatgtgtaaatcttggtattttcttatttgtgcaatgagaaatgttgttgagttaaagtgattttcgctatgtatatggttgtgttaaagtttactgat |
22404038 |
T |
|
| Q |
225 |
tttgaag-tttagtgatgatgt |
245 |
Q |
| |
|
| ||||| |||||||||||||| |
|
|
| T |
22404039 |
tatgaagttttagtgatgatgt |
22404060 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 29046661 - 29046430
Alignment:
| Q |
1 |
tgaatttgatatgcttcttgattca-tggatgagtgaaaagatttattatgttttattctttttcttgtagttgataattatatgaattggtgagttgca |
99 |
Q |
| |
|
||||||||||||||| ||||||| | ||||||| |||||| ||||||| | ||||||| ||||||||||||||| |||||| |||||||||||||||| |
|
|
| T |
29046661 |
tgaatttgatatgctccttgatttaatggatgattgaaaatatttattgtattttattatttttcttgtagttgctaattaa--gaattggtgagttgca |
29046564 |
T |
|
| Q |
100 |
attttgttaaagtatgtgatttgatgaatgtgtgaatctttatgttttcttatttatgcaatgagaaatgttgtcgagttaaagtgattttcgttgtata |
199 |
Q |
| |
|
||||||||| || |||||||||||||||| ||| |||||||||| |||||||||||||||||| |||||||||||| |||||||||||| |
|
|
| T |
29046563 |
attttgttagagcatgtgatttgatgaat------------atgatttcttatttgtgcaatgagaaatgttgttgagttaaagtgactttcgttgtata |
29046476 |
T |
|
| Q |
200 |
tgtggttgtgttaaagtttactgattttgaagtttagtgatgatgt |
245 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29046475 |
tgtggttgtgttaaagtttactgattttgaagtttagtgatgatgt |
29046430 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 28497292 - 28497236
Alignment:
| Q |
1 |
tgaatttgatatgcttcttgattcatggatgagtgaaaagatttattatgttttatt |
57 |
Q |
| |
|
|||||| || ||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
28497292 |
tgaattcgacatgcttcttgattcatgaatgagtgaaaagatttattatgttttatt |
28497236 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 178; Significance: 4e-96; HSPs: 5)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 21231949 - 21231705
Alignment:
| Q |
1 |
tgaatttgatatgcttcttgattca-tggatgagtgaaaagatttattatgttttattctttttcttgtagttgataattatatgaattggtgagttgca |
99 |
Q |
| |
|
||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
21231949 |
tgaatttgatatgcttcttgatttaatggatgagtgaaaagatttattatgttttattaattttcttgtagttgataattatatgaattggtgagttcca |
21231850 |
T |
|
| Q |
100 |
attttgttaaagtatgtgatttgatgaatgtgtgaatctttatgttttcttatttatgcaatgagaaatgttgtcgagttaaagtgattttcgttgtata |
199 |
Q |
| |
|
|||||||||||||||||||||| |||| ||||| |||||| |||||||||||||| |||||||||||||||||| |||||||||||| |||||||||||| |
|
|
| T |
21231849 |
attttgttaaagtatgtgattttatgattgtgtaaatcttgatgttttcttatttgtgcaatgagaaatgttgttgagttaaagtga-tttcgttgtata |
21231751 |
T |
|
| Q |
200 |
tgtggttgtgttaaagtttactgattttgaagtttagtgatgatgt |
245 |
Q |
| |
|
||||| ||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
21231750 |
tgtgggtgtgttaaagtttactgattttgaagtacagtgatgatgt |
21231705 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 9818278 - 9818045
Alignment:
| Q |
1 |
tgaatttgatatgcttcttgattca-tggatgagtgaaaagatttattatgttttattctttttcttgtagttgataattatatgaattggtgagttgca |
99 |
Q |
| |
|
||||||||||||||||||||||| | ||||||||||||||||||||| ||||||||| ||||||||||||||| |||||||| |||||||||||||||| |
|
|
| T |
9818278 |
tgaatttgatatgcttcttgatttaatggatgagtgaaaagatttatcgtgttttattatttttcttgtagttgctaattataagaattggtgagttgca |
9818179 |
T |
|
| Q |
100 |
attttgttaaagtatgtgatttgatgaatgtgtgaatctttatgttttcttatttatgcaatgagaaatgttgtcgagttaaagtgattttcgttgtata |
199 |
Q |
| |
|
||||||||| || ||||||||||||||| |||| |||||||||| || ||||||||||||||| |||||||||||| |||||||||||| |
|
|
| T |
9818178 |
attttgttagagcatgtgatttgatgaa------------tatgatttcttatttgtgaaatgagaaatgttgtggagttaaagtgactttcgttgtata |
9818091 |
T |
|
| Q |
200 |
tgtggttgtgttaaagtttactgattttgaagtttagtgatgatgt |
245 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9818090 |
tgtggttgtgttaaagtttactgattttgaagtttagtgatgatgt |
9818045 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 93 - 245
Target Start/End: Original strand, 9881211 - 9881364
Alignment:
| Q |
93 |
agttgcaattttgttaaagtatgtgatttgatgaatgtgtgaatctttatgttttcttatttatgcaatgagaaatgttgtcgagttaaagtgattttcg |
192 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||||||| |||| ||||||||||||| |||||||||||||||||| |
|
|
| T |
9881211 |
agttgtaattttgttaaagtatgtgatttgatgaatgtgtaaatcttgatgttttcttatttgtgcagtgagaaatgttgttgagttaaagtgattttcg |
9881310 |
T |
|
| Q |
193 |
ttgtatatgtggttgtgttaaagtttactgattttgaag-tttagtgatgatgt |
245 |
Q |
| |
|
||| |||| ||||| ||||||||||||| ||| ||||| |||||||||||||| |
|
|
| T |
9881311 |
ttgcgtatgcggttgcgttaaagtttactaattatgaagttttagtgatgatgt |
9881364 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 42077572 - 42077444
Alignment:
| Q |
1 |
tgaatttgatatgcttcttgattca-tggatgagtgaaaagatttattatgttttattctttttcttgtagttgataattatatgaattggtgagttgca |
99 |
Q |
| |
|
||||||||||| ||||||||||| | |||||||||||||||||||||| ||||||||| ||||||||||||||| |||||||| |||||||||||||||| |
|
|
| T |
42077572 |
tgaatttgatacgcttcttgatttaatggatgagtgaaaagatttattgtgttttattatttttcttgtagttgttaattataagaattggtgagttgca |
42077473 |
T |
|
| Q |
100 |
attttgttaaagtatgtgatttgatgaat |
128 |
Q |
| |
|
||||||||| || |||||||||||||||| |
|
|
| T |
42077472 |
attttgttagagcatgtgatttgatgaat |
42077444 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 73
Target Start/End: Original strand, 9881144 - 9881215
Alignment:
| Q |
3 |
aatttgatatgcttcttgattca-tggatgagtgaaaagatttattatgttttattctttttcttgtagttg |
73 |
Q |
| |
|
|||||||||||||| | |||||| |||||||||||||||||||| ||||||||||| |||||||||||||| |
|
|
| T |
9881144 |
aatttgatatgcttatcgattcaatggatgagtgaaaagatttactatgttttattaattttcttgtagttg |
9881215 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0016 (Bit Score: 118; Significance: 3e-60; HSPs: 1)
Name: scaffold0016
Description:
Target: scaffold0016; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 107910 - 108140
Alignment:
| Q |
1 |
tgaatttgatatgcttcttgattca-tggatgagtgaaaagatttattatgttttattctttttcttgtagttgataattatatgaattggtgagttgca |
99 |
Q |
| |
|
||||||||||||||| ||||||| | |||||||||||||||||||||| | ||||||| ||||| ||||||||| |||||||| |||||||||||||||| |
|
|
| T |
107910 |
tgaatttgatatgctccttgatttaatggatgagtgaaaagatttattgtattttattatttttgttgtagttgctaattataagaattggtgagttgca |
108009 |
T |
|
| Q |
100 |
attttgttaaagtatgtgatttgatgaatgtgtgaatctttatgttttcttatttatgcaatgagaaatgttgtcgagttaaagtgattttcgttgtata |
199 |
Q |
| |
|
||||||||| | ||||||||||||||| |||| |||||||||| |||||||||||||||||| |||||| ||||| ||||||| ||| |
|
|
| T |
108010 |
attttgttagaacatgtgatttgatgaa------------tatgatttcttatttgtgcaatgagaaatgttgttgagttagagtgactttcgttatatt |
108097 |
T |
|
| Q |
200 |
tgtggttgtgttaaagtttactgattttgaagtttagtgatga |
242 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
108098 |
tgaggttgtgttaaagtttactgattttgaagtttagtgatga |
108140 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 94; Significance: 5e-46; HSPs: 5)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 41943118 - 41942924
Alignment:
| Q |
1 |
tgaatttgatatgcttcttgattca-tggatgagtgaaaagatttattatgttttattctttttcttgtagttgataattatatgaattggtgagttgca |
99 |
Q |
| |
|
||||||||||||||||||||||| | |||||||||||||||||||||| ||||||||| ||||||||||||||| |||||||| |||||||||||||||| |
|
|
| T |
41943118 |
tgaatttgatatgcttcttgatttaatggatgagtgaaaagatttattgtgttttattatttttcttgtagttgctaattataagaattggtgagttgca |
41943019 |
T |
|
| Q |
100 |
attttgttaaagtatgtgatttgatgaatgtgtgaatctttatgttttcttatttatgcaatgagaaatgttgtcgagttaaagtgattttcgttgtata |
199 |
Q |
| |
|
||||||||| || ||||||||||||||| |||| |||||||||| || ||||||||||||||| || |||||||||||| |||| || |
|
|
| T |
41943018 |
attttgttagagcatgtgatttgatgaa------------tatgatttcttatttgtgaaatgagaaatgttgttgaattaaagtgatttgtattgtgta |
41942931 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 8 - 206
Target Start/End: Complemental strand, 10336177 - 10335990
Alignment:
| Q |
8 |
gatatgcttcttgattca-tggatgagtgaaaagatttattatgttttattctttttcttgtagttgataattatatgaattggtgagttgcaattttgt |
106 |
Q |
| |
|
|||||||||||||||| | |||||||||||||||||||| | ||||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| |
|
|
| T |
10336177 |
gatatgcttcttgatttaatggatgagtgaaaagatttagtgtgttttattatttttcttgtagttgcaaattataagaattggtgagttgcaattttgt |
10336078 |
T |
|
| Q |
107 |
taaagtatgtgatttgatgaatgtgtgaatctttatgttttcttatttatgcaatgagaaatgttgtcgagttaaagtgattttcgttgtatatgtggtt |
206 |
Q |
| |
|
|| || ||||||||||||||| |||| ||||||||||||| ||||||||||||| | || ||||||||||||| ||||| ||||||||| |
|
|
| T |
10336077 |
tagagcatgtgatttgatgaa------------tatgatttcttatttatgaaatgagaaatgttattgaattaaagtgatttttgttgtgtatgtggtt |
10335990 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 3295349 - 3295406
Alignment:
| Q |
1 |
tgaatttgatatgcttcttgattca-tggatgagtgaaaagatttattatgttttatt |
57 |
Q |
| |
|
||||||||||||||||||||||| | |||||||| ||||||||||||| ||||||||| |
|
|
| T |
3295349 |
tgaatttgatatgcttcttgatttaatggatgagagaaaagatttattgtgttttatt |
3295406 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 31519198 - 31519152
Alignment:
| Q |
1 |
tgaatttgatatgcttcttgattc-atggatgagtgaaaagatttat |
46 |
Q |
| |
|
||||||||||||||||||||| || || ||||||||||||||||||| |
|
|
| T |
31519198 |
tgaatttgatatgcttcttgactcaatagatgagtgaaaagatttat |
31519152 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 139
Target Start/End: Complemental strand, 31519116 - 31519056
Alignment:
| Q |
79 |
tatatgaattggtgagttgcaattttgttaaagtatgtgatttgatgaatgtgtgaatctt |
139 |
Q |
| |
|
|||| ||||| |||| |||||||||||||||| |||||| ||||||||| ||||||||| |
|
|
| T |
31519116 |
tataagaatttgtgaattgcaattttgttaaaatatgtgtcttgatgaataagtgaatctt |
31519056 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0028 (Bit Score: 59; Significance: 4e-25; HSPs: 2)
Name: scaffold0028
Description:
Target: scaffold0028; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 54 - 128
Target Start/End: Complemental strand, 148443 - 148369
Alignment:
| Q |
54 |
tattctttttcttgtagttgataattatatgaattggtgagttgcaattttgttaaagtatgtgatttgatgaat |
128 |
Q |
| |
|
|||| ||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
148443 |
tattatttttcttgtagttgctaattataagaattggtgagttgcaattttgttagagtatgtgatttgatgaat |
148369 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0028; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 206
Target Start/End: Complemental strand, 148364 - 148303
Alignment:
| Q |
145 |
tttcttatttatgcaatgagaaatgttgtcgagttaaagtgattttcgttgtatatgtggtt |
206 |
Q |
| |
|
|||||||||| || ||||||||||||||| || || |||||||||| ||||| ||| ||||| |
|
|
| T |
148364 |
tttcttatttgtgaaatgagaaatgttgttgaatttaagtgatttttgttgtgtatttggtt |
148303 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0259 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0259
Description:
Target: scaffold0259; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 2603 - 2546
Alignment:
| Q |
1 |
tgaatttgatatgcttcttgattca-tggatgagtgaaaagatttattatgttttatt |
57 |
Q |
| |
|
||||||||| ||||||||||||| | |||||||||||||||||||||| ||||||||| |
|
|
| T |
2603 |
tgaatttgacatgcttcttgatttaatggatgagtgaaaagatttattgtgttttatt |
2546 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 128
Target Start/End: Original strand, 21555413 - 21555471
Alignment:
| Q |
70 |
gttgataattatatgaattggtgagttgcaattttgttaaagtatgtgatttgatgaat |
128 |
Q |
| |
|
|||||||| |||| |||| |||| |||||||||| ||||| ||||||||||||||||| |
|
|
| T |
21555413 |
gttgataaatataagaatatgtgatttgcaatttttttaaaatatgtgatttgatgaat |
21555471 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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