View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17682_low_14 (Length: 320)

Name: NF17682_low_14
Description: NF17682
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17682_low_14
NF17682_low_14
[»] chr8 (18 HSPs)
chr8 (1-302)||(14877040-14877341)
chr8 (1-297)||(19292210-19292506)
chr8 (28-301)||(23219366-23219639)
chr8 (1-289)||(19998398-19998686)
chr8 (1-302)||(17616820-17617121)
chr8 (4-289)||(20042905-20043190)
chr8 (1-302)||(21857407-21857708)
chr8 (3-289)||(25398017-25398300)
chr8 (157-297)||(25734527-25734667)
chr8 (3-124)||(25734346-25734464)
chr8 (28-294)||(18400369-18400635)
chr8 (40-277)||(8309559-8309796)
chr8 (52-141)||(15204620-15204709)
chr8 (40-277)||(21822464-21822701)
chr8 (40-277)||(21951158-21951395)
chr8 (44-277)||(22094336-22094569)
chr8 (40-277)||(8327739-8327976)
chr8 (28-124)||(22819294-22819390)
[»] scaffold0175 (1 HSPs)
scaffold0175 (4-301)||(11321-11618)
[»] chr7 (22 HSPs)
chr7 (1-290)||(13735166-13735455)
chr7 (1-297)||(14228646-14228942)
chr7 (1-297)||(16329577-16329873)
chr7 (1-297)||(543828-544124)
chr7 (3-301)||(8786008-8786303)
chr7 (3-294)||(4464499-4464789)
chr7 (1-297)||(14546653-14546949)
chr7 (1-302)||(16153621-16153922)
chr7 (1-289)||(4308798-4309086)
chr7 (1-297)||(23511266-23511562)
chr7 (1-302)||(13382-13683)
chr7 (1-302)||(9579150-9579451)
chr7 (1-302)||(9727018-9727319)
chr7 (1-302)||(15296134-15296435)
chr7 (1-289)||(12563089-12563378)
chr7 (1-123)||(23205139-23205261)
chr7 (40-289)||(13653095-13653344)
chr7 (40-277)||(18275115-18275352)
chr7 (40-277)||(13668927-13669164)
chr7 (44-277)||(16470395-16470628)
chr7 (179-290)||(16527237-16527348)
chr7 (86-277)||(18598208-18598399)
[»] chr2 (16 HSPs)
chr2 (1-290)||(15963-16252)
chr2 (1-297)||(25353045-25353341)
chr2 (1-297)||(25359323-25359619)
chr2 (28-258)||(24370228-24370458)
chr2 (28-292)||(24176433-24176697)
chr2 (11-294)||(29952615-29952897)
chr2 (28-294)||(20090-20356)
chr2 (40-119)||(23714140-23714219)
chr2 (57-174)||(25592188-25592305)
chr2 (43-294)||(21343246-21343496)
chr2 (40-277)||(112599-112836)
chr2 (40-277)||(22289307-22289544)
chr2 (40-277)||(27618657-27618894)
chr2 (40-277)||(27622684-27622921)
chr2 (40-277)||(16770738-16770975)
chr2 (40-277)||(24800227-24800464)
[»] chr4 (11 HSPs)
chr4 (3-301)||(13623398-13623693)
chr4 (1-302)||(16641429-16641730)
chr4 (1-289)||(14689629-14689906)
chr4 (40-294)||(11921189-11921443)
chr4 (71-289)||(45242731-45242950)
chr4 (1-289)||(18288169-18288472)
chr4 (130-289)||(15351674-15351833)
chr4 (40-277)||(15249423-15249660)
chr4 (40-277)||(2033-2270)
chr4 (40-277)||(22106051-22106288)
chr4 (179-290)||(6403-6514)
[»] chr5 (22 HSPs)
chr5 (1-297)||(20600175-20600471)
chr5 (1-297)||(20606472-20606768)
chr5 (1-297)||(20612791-20613087)
chr5 (1-302)||(20795085-20795386)
chr5 (1-297)||(18068464-18068760)
chr5 (1-297)||(21284584-21284880)
chr5 (1-297)||(24216011-24216307)
chr5 (28-292)||(22943461-22943725)
chr5 (1-289)||(23604484-23604772)
chr5 (1-302)||(23714341-23714642)
chr5 (1-302)||(24936805-24937106)
chr5 (28-292)||(21383352-21383616)
chr5 (143-302)||(20448495-20448654)
chr5 (1-108)||(20448646-20448753)
chr5 (40-290)||(25121073-25121323)
chr5 (40-290)||(25180164-25180414)
chr5 (40-277)||(30768018-30768255)
chr5 (40-290)||(22322334-22322584)
chr5 (40-277)||(16102981-16103218)
chr5 (40-277)||(20443091-20443328)
chr5 (40-277)||(24968088-24968325)
chr5 (203-290)||(26774176-26774263)
[»] scaffold0029 (1 HSPs)
scaffold0029 (1-297)||(118945-119241)
[»] chr1 (11 HSPs)
chr1 (1-289)||(27042979-27043267)
chr1 (59-297)||(20071571-20071809)
chr1 (1-289)||(21782802-21783090)
chr1 (28-294)||(19878827-19879093)
chr1 (176-292)||(16399767-16399883)
chr1 (40-277)||(23500539-23500776)
chr1 (40-277)||(20232610-20232847)
chr1 (179-290)||(52952686-52952797)
chr1 (192-289)||(21790436-21790533)
chr1 (40-277)||(22842813-22843050)
chr1 (40-277)||(21803591-21803828)
[»] chr3 (22 HSPs)
chr3 (1-297)||(10606881-10607177)
chr3 (2-297)||(22168658-22168953)
chr3 (1-289)||(20151691-20151979)
chr3 (1-289)||(20557289-20557577)
chr3 (1-289)||(6810979-6811267)
chr3 (1-289)||(9364599-9364887)
chr3 (1-289)||(13092412-13092700)
chr3 (1-289)||(3248933-3249221)
chr3 (60-302)||(26173859-26174101)
chr3 (40-294)||(17215984-17216235)
chr3 (1-106)||(13088835-13088940)
chr3 (40-277)||(13511251-13511488)
chr3 (40-290)||(784-1034)
chr3 (40-277)||(10142149-10142386)
chr3 (40-277)||(11879231-11879468)
chr3 (40-277)||(15640165-15640402)
chr3 (188-290)||(12159685-12159787)
chr3 (40-277)||(12198360-12198597)
chr3 (40-277)||(13141067-13141304)
chr3 (40-277)||(13192283-13192520)
chr3 (41-290)||(13201557-13201806)
chr3 (40-277)||(15633801-15634038)
[»] scaffold0301 (1 HSPs)
scaffold0301 (1-302)||(499-800)
[»] scaffold0221 (1 HSPs)
scaffold0221 (40-297)||(659-912)
[»] chr6 (19 HSPs)
chr6 (1-289)||(22070577-22070865)
chr6 (28-289)||(25950364-25950625)
chr6 (1-297)||(18845547-18845842)
chr6 (1-301)||(12659097-12659393)
chr6 (1-302)||(18191108-18191409)
chr6 (1-289)||(17815770-17816058)
chr6 (1-289)||(12655831-12656119)
chr6 (28-294)||(17792727-17792993)
chr6 (40-294)||(23522647-23522901)
chr6 (28-301)||(23345918-23346190)
chr6 (31-294)||(18628514-18628777)
chr6 (28-293)||(22600115-22600380)
chr6 (203-290)||(23613672-23613759)
chr6 (28-290)||(25775904-25776166)
chr6 (40-277)||(20165289-20165526)
chr6 (192-294)||(18974503-18974605)
chr6 (40-277)||(20021024-20021261)
chr6 (41-124)||(11234535-11234618)
chr6 (40-277)||(24860133-24860369)
[»] scaffold0012 (2 HSPs)
scaffold0012 (1-289)||(15299-15587)
scaffold0012 (179-290)||(187444-187555)
[»] scaffold0026 (1 HSPs)
scaffold0026 (1-289)||(14879-15167)
[»] scaffold0053 (1 HSPs)
scaffold0053 (1-289)||(34167-34455)
[»] scaffold0145 (1 HSPs)
scaffold0145 (1-289)||(453-745)
[»] scaffold0014 (1 HSPs)
scaffold0014 (40-294)||(169261-169513)
[»] scaffold0213 (1 HSPs)
scaffold0213 (28-301)||(22664-22937)
[»] scaffold0090 (1 HSPs)
scaffold0090 (1-166)||(54975-55140)
[»] scaffold0001 (1 HSPs)
scaffold0001 (28-294)||(521828-522094)
[»] scaffold0074 (2 HSPs)
scaffold0074 (45-287)||(10777-11019)
scaffold0074 (192-294)||(21881-21983)
[»] scaffold0816 (1 HSPs)
scaffold0816 (1-124)||(6-129)
[»] scaffold1092 (1 HSPs)
scaffold1092 (28-294)||(439-705)
[»] scaffold1058 (1 HSPs)
scaffold1058 (28-294)||(1816-2082)
[»] scaffold0168 (1 HSPs)
scaffold0168 (170-302)||(4-136)
[»] scaffold0006 (1 HSPs)
scaffold0006 (117-289)||(35075-35247)
[»] scaffold0506 (1 HSPs)
scaffold0506 (179-294)||(6557-6672)
[»] scaffold0112 (1 HSPs)
scaffold0112 (40-277)||(6389-6626)
[»] scaffold0346 (1 HSPs)
scaffold0346 (179-290)||(1204-1315)
[»] scaffold0091 (1 HSPs)
scaffold0091 (179-290)||(48287-48398)
[»] scaffold0004 (1 HSPs)
scaffold0004 (179-290)||(368239-368350)
[»] scaffold0078 (1 HSPs)
scaffold0078 (40-277)||(25591-25828)
[»] scaffold0630 (1 HSPs)
scaffold0630 (40-277)||(366-603)


Alignment Details
Target: chr8 (Bit Score: 222; Significance: 1e-122; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 302
Target Start/End: Complemental strand, 14877341 - 14877040
Alignment:
Q  1 cacatcttcagatgagtcatacgatggtattgtgtacataacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaat 100  Q
    |||||||||||||||| ||||||||  |||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| |||    
T  14877341 cacatcttcagatgagccatacgattttattgtgtacctaacggttgaaggtaataattttgaaataaatcctgcacttatttacttagcgcagcataat 14877242  T
Q  101 caatttttcggatcacccactgagaattcgaattttcatatttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctac 200  Q
    |||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| |    
T  14877241 caatttttcggatcacccactgaggatccgaattttcatatttcaacttttctaaaactcagtggaactttgaaggcaaaccaataggccgtaaggctgc 14877142  T
Q  201 acctctttcctttttccttaggggataaagttagtgctttgtttctttcattagaagtcggttctatcatttcatggcaacaaatgaggcaagcttttct 300  Q
    | ||||||||||||||||||||||||| || ||||| || ||||| |||||| ||||||||||||||||||||||||||||||||||||||| |||||||    
T  14877141 atctctttcctttttccttaggggatagaggtagtgtttggtttcattcattggaagtcggttctatcatttcatggcaacaaatgaggcaaacttttct 14877042  T
Q  301 tt 302  Q
    ||    
T  14877041 tt 14877040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 1 - 297
Target Start/End: Complemental strand, 19292506 - 19292210
Alignment:
Q  1 cacatcttcagatgagtcatacgatggtattgtgtacataacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaat 100  Q
    ||||||||| |||||| ||||||||| ||||||||||  |||| ||||||||||||||||||||||||| ||||||||||||| |||||||||||| |||    
T  19292506 cacatcttctgatgagccatacgatgctattgtgtacccaacgattgagggtaataattttgaaataaaacctgcacttatttccttagtgcagcaaaat 19292407  T
Q  101 caatttttcggatcacccactgagaattcgaattttcatatttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctac 200  Q
    |||||||||||||||||||||||| || ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| |    
T  19292406 caatttttcggatcacccactgaggatccgaattttcgtatttcaacttttctaaaactcagtggaactttgaaggcaaaccaagaggccgtaaggctgc 19292307  T
Q  201 acctctttcctttttccttaggggataaagttagtgctttgtttctttcattagaagtcggttctatcatttcatggcaacaaatgaggcaagcttt 297  Q
    |||||||| ||||||||||| |||||| || |||||||| ||||| ||||||   | | |||||||||| ||||||| | |||||||| | ||||||    
T  19292306 acctcttttctttttccttaagggatagagctagtgcttggtttcattcattgacaattggttctatcacttcatgggaccaaatgagacgagcttt 19292210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 28 - 301
Target Start/End: Complemental strand, 23219639 - 23219366
Alignment:
Q  28 tattgtgtacataacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaatcaatttttcggatcacccactgagaat 127  Q
    ||||||||||  || ||||||||||||||||||||||||||| |||||||||||||||||| ||||||| ||| |||||||||||||||||| |||||||    
T  23219639 tattgtgtacccaatggttgagggtaataattttgaaataaagcctgcacttatttacttaatgcagcaaaattaatttttcggatcacccattgagaat 23219540  T
Q  128 tcgaattttcatatttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctacacctctttcctttttccttaggggata 227  Q
     ||||| ||||| ||||||||||| ||| ||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||    
T  23219539 ccgaatcttcatgtttcaacttttttaagactaagtggaaccttgaaggcaaaccaagaggccgtaaggctacacctctttcctttttccttaagggata 23219440  T
Q  228 aagttagtgctttgtttctttcattagaagtcggttctatcatttcatggcaacaaatgaggcaagcttttctt 301  Q
     || |||||| | ||||| |||||| ||||| |||||||||| ||||||| | |||||||||||||||||||||    
T  23219439 gagctagtgcatggtttcattcattggaagttggttctatcacttcatggtaccaaatgaggcaagcttttctt 23219366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 1 - 289
Target Start/End: Original strand, 19998398 - 19998686
Alignment:
Q  1 cacatcttcagatgagtcatacgatggtattgtgtacataacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaat 100  Q
    |||||||||||||||| | ||||||| ||||||||||  |||||||||||||||||||||||||||||| ||||| |||||||||  ||||||||| |||    
T  19998398 cacatcttcagatgagccgtacgatgctattgtgtacccaacggttgagggtaataattttgaaataaagcctgcgcttatttaccaagtgcagcaaaat 19998497  T
Q  101 caatttttcggatcacccactgagaattcgaattttcatatttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctac 200  Q
    |||||||||||||||||||||||| || ||||| ||||| |||||| |||| ||| |||||||||||| ||||||||||||||| ||||||||||||| |    
T  19998498 caatttttcggatcacccactgaggatccgaatcttcatgtttcaatttttttaagactcagtggaactttgaaggcaaaccaagaggccgtaaggctgc 19998597  T
Q  201 acctctttcctttttccttaggggataaagttagtgctttgtttctttcattagaagtcggttctatcatttcatggcaacaaatgagg 289  Q
    ||||||||||||| || ||  |||||| || |||||||| ||||| ||||||| || | |||||||| ||||||||| | |||||||||    
T  19998598 acctctttcctttctctttgagggatagagctagtgcttggtttcattcattaaaaattggttctataatttcatgggaccaaatgagg 19998686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 1 - 302
Target Start/End: Original strand, 17616820 - 17617121
Alignment:
Q  1 cacatcttcagatgagtcatacgatggtattgtgtacataacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaat 100  Q
    |||||||||||||||| | ||||||| ||||||||||  ||||||| |||||||||| ||||||||||| ||||||||||||||| ||||||||||||||    
T  17616820 cacatcttcagatgagccgtacgatgctattgtgtacccaacggttaagggtaataaatttgaaataaagcctgcacttatttacctagtgcagcagaat 17616919  T
Q  101 caatttttcggatcacccactgagaattcgaattttcatatttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctac 200  Q
    |||||||||||||||||||||||| || || || ||||| |||||| |||| ||| |||||||||||| ||||||||||||||| ||||||||||||| |    
T  17616920 caatttttcggatcacccactgaggatccgtatcttcatgtttcaatttttttaagactcagtggaactttgaaggcaaaccaagaggccgtaaggctgc 17617019  T
Q  201 acctctttcctttttccttaggggataaagttagtgctttgtttctttcattagaagtcggttctatcatttcatggcaacaaatgaggcaagcttttct 300  Q
    ||||||||||| | || ||  |||||| || |||||||| ||||| ||||||  || | ||||||||||  |||||| | ||||||||| | || |||||    
T  17617020 acctctttcctctctctttgagggatagagctagtgcttggtttcattcattgcaaattggttctatcacctcatggaaccaaatgaggaaggcatttct 17617119  T
Q  301 tt 302  Q
    ||    
T  17617120 tt 17617121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 4 - 289
Target Start/End: Complemental strand, 20043190 - 20042905
Alignment:
Q  4 atcttcagatgagtcatacgatggtattgtgtacataacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaatcaa 103  Q
    ||||||||||||| | ||||||| |||| |||||  ||||||||||||||||||||||||||||||  |||||||||||||| |||||||| | ||||||    
T  20043190 atcttcagatgagccgtacgatgctattttgtacccaacggttgagggtaataattttgaaataaagtctgcacttatttacctagtgcaggaaaatcaa 20043091  T
Q  104 tttttcggatcacccactgagaattcgaattttcatatttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctacacc 203  Q
    ||||||||||||||||||||| || ||||| ||||| |||||| |||| ||| |||||||||||| ||||||||||||||| ||||||||||||| ||||    
T  20043090 tttttcggatcacccactgaggatccgaatcttcatgtttcaatttttttaagactcagtggaactttgaaggcaaaccaagaggccgtaaggctgcacc 20042991  T
Q  204 tctttcctttttccttaggggataaagttagtgctttgtttctttcattagaagtcggttctatcatttcatggcaacaaatgagg 289  Q
    |||||||||| || ||  |||||| || |||||||| ||||| ||||||  || | |||||||| ||||||||| | |||||||||    
T  20042990 tctttcctttctctttgagggatagagctagtgcttggtttcattcattgaaaattggttctataatttcatgggaccaaatgagg 20042905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 1 - 302
Target Start/End: Complemental strand, 21857708 - 21857407
Alignment:
Q  1 cacatcttcagatgagtcatacgatggtattgtgtacataacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaat 100  Q
    |||||||||||||||| | ||||||| ||||||||||  ||||||| ||| || ||| ||||||||||| ||||||||||||||| | |||||||| |||    
T  21857708 cacatcttcagatgagccgtacgatgctattgtgtacccaacggttaaggatattaaatttgaaataaagcctgcacttatttacctggtgcagcaaaat 21857609  T
Q  101 caatttttcggatcacccactgagaattcgaattttcatatttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctac 200  Q
    |||||||| ||||||||||||||| || ||||||||||| |||||| |||| ||| |||||||||||| ||||||||||||||| ||||||||||||| |    
T  21857608 caattttttggatcacccactgaggatccgaattttcatgtttcaatttttttaagactcagtggaactttgaaggcaaaccaagaggccgtaaggctgc 21857509  T
Q  201 acctctttcctttttccttaggggataaagttagtgctttgtttctttcattagaagtcggttctatcatttcatggcaacaaatgaggcaagcttttct 300  Q
    ||||||||||||| || ||  |||||| || |||||||| ||||| ||||||  || | |||||||||| ||||||| | ||||||||| | || |||||    
T  21857508 acctctttcctttctctttgagggatagagctagtgcttggtttcattcattgcaaattggttctatcacttcatggaaccaaatgaggaaggcatttct 21857409  T
Q  301 tt 302  Q
    ||    
T  21857408 tt 21857407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 3 - 289
Target Start/End: Original strand, 25398017 - 25398300
Alignment:
Q  3 catcttcagatgagtcatacgatggtattgtgtacataacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaatca 102  Q
    |||||||| |||||| ||||| || ||||||||||  |||  ||||||   | |||||||||||||| |||||||||||||| ||||||||||| |||||    
T  25398017 catcttcatatgagttatacgctgttattgtgtacgcaacaattgagg---acaattttgaaataaaacctgcacttatttatttagtgcagcaaaatca 25398113  T
Q  103 atttttcggatcacccactgagaattcgaattttcatatttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctacac 202  Q
    ||||||||||||||| |||||| || ||||| ||||||||||||||||| ||| |||||||||||||||||||||||||||| |||  |||||||| |||    
T  25398114 atttttcggatcacctactgaggatccgaatcttcatatttcaacttttttaagactcagtggaaccttgaaggcaaaccaagagggtgtaaggctgcac 25398213  T
Q  203 ctctttcctttttccttaggggataaagttagtgctttgtttctttcattagaagtcggttctatcatttcatggcaacaaatgagg 289  Q
    ||||||| |||||||||| |||||| || ||||| || ||||| ||||||   | | |||||||||| ||||||| | |||||||||    
T  25398214 ctctttcttttttccttaagggatagagctagtgattggtttcattcattgacaattggttctatcacttcatgggaccaaatgagg 25398300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 157 - 297
Target Start/End: Original strand, 25734527 - 25734667
Alignment:
Q  157 actcagtggaaccttgaaggcaaaccaaaaggccgtaaggctacacctctttcctttttccttaggggataaagttagtgctttgtttctttcattagaa 256  Q
    |||||||||||||||||||||||||||| |||| |||||||| |||||||||| |||||||||| | |||| || |||||||| ||||| ||||||   |    
T  25734527 actcagtggaaccttgaaggcaaaccaagaggctgtaaggctgcacctctttcttttttccttaagtgatagagctagtgcttggtttcattcattgaca 25734626  T
Q  257 gtcggttctatcatttcatggcaacaaatgaggcaagcttt 297  Q
     | |||||||||| ||||||| | |||||||||| ||||||    
T  25734627 attggttctatcacttcatgggaccaaatgaggctagcttt 25734667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 3 - 124
Target Start/End: Original strand, 25734346 - 25734464
Alignment:
Q  3 catcttcagatgagtcatacgatggtattgtgtacataacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaatca 102  Q
    |||||||| |||||| ||||| || ||||||||||  |||  ||||||   | |||||||||||||| |||||||||||||| ||||||||||| |||||    
T  25734346 catcttcatatgagttatacgctgttattgtgtacccaacaattgagg---acaattttgaaataaaacctgcacttatttatttagtgcagcaaaatca 25734442  T
Q  103 atttttcggatcacccactgag 124  Q
    |||||||||||| || ||||||    
T  25734443 atttttcggatctcctactgag 25734464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 294
Target Start/End: Original strand, 18400369 - 18400635
Alignment:
Q  28 tattgtgtacataacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaatcaatttttcggatcacccactgagaat 127  Q
    ||||||||||  ||||||||||||||| ||||| || || || | ||||||  |  | || ||||| || ||||| ||||  ||||||||||||||| ||    
T  18400369 tattgtgtacccaacggttgagggtaacaatttcgagatcaagcttgcactactcaatttggtgcaacaaaatcagttttctggatcacccactgaggat 18400468  T
Q  128 tcgaattttcatatttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctacacctctttcctttttccttaggggata 227  Q
     | ||| | ||||||||  | || |||| ||||||||| ||| | || |  ||| || | |||||||| || || |||||||| ||||||||| ||||||    
T  18400469 ccaaatctccatatttcttccttcctaagactcagtggcaccataaaagagaactaagaagccgtaagacttcatctctttcccttttccttaagggata 18400568  T
Q  228 aagttagtgctttgtttctttcattagaagtcggttctatcatttcatggcaacaaatgaggcaagc 294  Q
     || ||| |||| |||   |||  ||||||||||||| |||| ||||||| | ||||||||||||||    
T  18400569 gagctagcgcttggttctattccctagaagtcggttccatcacttcatgggatcaaatgaggcaagc 18400635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 277
Target Start/End: Original strand, 8309559 - 8309796
Alignment:
Q  40 aacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaatcaatttttcggatcacccactgagaattcgaattttcat 139  Q
    |||||||| ||||||||| || ||||| || ||||||||  |  | ||||||||||| || || ||||  ||||||||||||||| || | ||| | |||    
T  8309559 aacggttgcgggtaataacttcgaaatcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccat 8309658  T
Q  140 atttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctacacctctttcctttttccttaggggataaagttagtgctt 239  Q
    |||||  | || || | ||||||||| ||| | || |  |||||| | |||||||| || || |||||||| ||||||||| |||||| || ||| ||||    
T  8309659 atttcttccttccttagactcagtggcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctagcgctt 8309758  T
Q  240 tgtttctttcattagaagtcggttctatcatttcatgg 277  Q
     ||| | |||  ||||||||||||| || | |||||||    
T  8309759 ggttccattccctagaagtcggttccattacttcatgg 8309796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 52 - 141
Target Start/End: Original strand, 15204620 - 15204709
Alignment:
Q  52 taataattttgaaataaatcctgcacttatttacttagtgcagcagaatcaatttttcggatcacccactgagaattcgaattttcatat 141  Q
    |||||||||||| ||||| ||||| ||  || || |||||||||| ||||||||||||| || |||||||||| || | ||| |||||||    
T  15204620 taataattttgatataaagcctgcgctacttaacatagtgcagcaaaatcaatttttcgaattacccactgaggatccaaatcttcatat 15204709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 277
Target Start/End: Original strand, 21822464 - 21822701
Alignment:
Q  40 aacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaatcaatttttcggatcacccactgagaattcgaattttcat 139  Q
    |||||||||||||||||| || || || || ||||||||  |  | || |||||||| ||||| ||||  ||||||||||||||| || | ||| | |||    
T  21822464 aacggttgagggtaataacttcgagatcaaacctgcactactcaatttggtgcagcaaaatcagttttctggatcacccactgaggatccaaatctccat 21822563  T
Q  140 atttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctacacctctttcctttttccttaggggataaagttagtgctt 239  Q
    |||||  | || || | ||||||||| ||| | || |  |||||| | |||||||| || || |||||||| ||||||||| |||||| || ||| ||||    
T  21822564 atttcttccttccttagactcagtggcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctagcgctt 21822663  T
Q  240 tgtttctttcattagaagtcggttctatcatttcatgg 277  Q
     ||| | |||   |||||||||||| || | |||||||    
T  21822664 ggttccattcccgagaagtcggttccattacttcatgg 21822701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 277
Target Start/End: Original strand, 21951158 - 21951395
Alignment:
Q  40 aacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaatcaatttttcggatcacccactgagaattcgaattttcat 139  Q
    |||||||||||||||||| || || || || ||||||||  |  | ||||||||||| ||||| ||||  ||||||||||||||| || | ||| | |||    
T  21951158 aacggttgagggtaataacttcgagatcaagcctgcactactccatttagtgcagcaaaatcagttttctggatcacccactgaggatccaaatctccat 21951257  T
Q  140 atttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctacacctctttcctttttccttaggggataaagttagtgctt 239  Q
    |||||  | || || | |||||| || ||| | || |  |||||| | ||| |||| || || |||||||| || |||||| |||||| || ||| ||||    
T  21951258 atttcttccttccttagactcagcggcaccataaaagagaaccaagaagccttaagactccatctctttcccttctccttaagggatagagctagcgctt 21951357  T
Q  240 tgtttctttcattagaagtcggttctatcatttcatgg 277  Q
     ||| | |||  ||||||||||||| |||| |||||||    
T  21951358 ggttccattccctagaagtcggttccatcacttcatgg 21951395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 277
Target Start/End: Original strand, 22094336 - 22094569
Alignment:
Q  44 gttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaatcaatttttcggatcacccactgagaattcgaattttcatattt 143  Q
    |||| ||||||||| || ||||| || ||||||||  |  | || |||||||| ||||| ||||  ||||||||||||||| || |  || | |||||||    
T  22094336 gttgcgggtaataacttcgaaatcaagcctgcactactcaatttggtgcagcaaaatcagttttctggatcacccactgaggatccacatctccatattt 22094435  T
Q  144 caacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctacacctctttcctttttccttaggggataaagttagtgctttgtt 243  Q
    |  | || || | ||||||||| ||| | || |  |||||| | |||||||| || || |||||||| ||||||||| |||||| || ||| |||| |||    
T  22094436 cttccttccttagactcagtggcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctagcgcttggtt 22094535  T
Q  244 tctttcattagaagtcggttctatcatttcatgg 277  Q
     | |||  ||||||||||||| |||| |||||||    
T  22094536 ccattccctagaagtcggttccatcacttcatgg 22094569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 277
Target Start/End: Complemental strand, 8327976 - 8327739
Alignment:
Q  40 aacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaatcaatttttcggatcacccactgagaattcgaattttcat 139  Q
    |||||||| ||||||||| || ||| | || ||||||||  |  | ||||||||||| || || ||||  ||||||||||||||| || | ||| | |||    
T  8327976 aacggttgcgggtaataacttcgaagtcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccat 8327877  T
Q  140 atttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctacacctctttcctttttccttaggggataaagttagtgctt 239  Q
    |||||  | || || | ||||||||| ||| | || |  |||||| | |||||||| || || |||||||| ||||||||| |||||| || | | ||||    
T  8327876 atttcttccttccttagactcagtggcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgctt 8327777  T
Q  240 tgtttctttcattagaagtcggttctatcatttcatgg 277  Q
     ||| | |||  ||||||||||||| || | |||||||    
T  8327776 ggttccattccctagaagtcggttccattacttcatgg 8327739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 124
Target Start/End: Original strand, 22819294 - 22819390
Alignment:
Q  28 tattgtgtacataacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaatcaatttttcggatcacccactgag 124  Q
    |||||||||| |||||||||| ||||| || ||||| || || ||||||||  |  | || |||||||| ||||| ||||  |||||||||||||||    
T  22819294 tattgtgtacctaacggttgaaggtaacaactttgagattaagcctgcactactcaattttgtgcagcaaaatcagttttctggatcacccactgag 22819390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 4 - 301
Target Start/End: Complemental strand, 11618 - 11321
Alignment:
Q  4 atcttcagatgagtcatacgatggtattgtgtacataacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaatcaa 103  Q
    ||||||||||||||||||||||| ||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  11618 atcttcagatgagtcatacgatgctattgtgtacccaacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgtagcagaatcaa 11519  T
Q  104 tttttcggatcacccactgagaattcgaattttcatatttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctacacc 203  Q
    ||||| ||||||||||||||| || |||||||||||||||||||||||||||||| |||||||||||||||||||| |||| ||||||||||||| ||||    
T  11518 tttttaggatcacccactgaggatccgaattttcatatttcaacttttctaaaacgcagtggaaccttgaaggcaagccaagaggccgtaaggctgcacc 11419  T
Q  204 tctttcctttttccttaggggataaagttagtgctttgtttctttcattagaagtcggttctatcatttcatggcaacaaatgaggcaagcttttctt 301  Q
    ||||||||||||||||| |||||| || |||||||| ||||  |||||| |||||||||||||||| ||||||||| |||||||||||||||||||||    
T  11418 tctttcctttttccttaagggatagagctagtgcttggttttattcattggaagtcggttctatcacttcatggcaccaaatgaggcaagcttttctt 11321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 186; Significance: 1e-101; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 290
Target Start/End: Original strand, 13735166 - 13735455
Alignment:
Q  1 cacatcttcagatgagtcatacgatggtattgtgtacataacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaat 100  Q
    |||||||||||||||| ||||||||| |||||||||   |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  13735166 cacatcttcagatgagccatacgatgctattgtgtatccaacggttgagggtaataattttgaaataaagcctgcacttatttacttagtgcagcagaat 13735265  T
Q  101 caatttttcggatcacccactgagaattcgaattttcatatttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctac 200  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| ||||||||| |    
T  13735266 caatttttcggatcacccactgaggatccgaattttcatatttcaacttttctaagactcagtggaaccttgaaggcaaaccaagagggcgtaaggctgc 13735365  T
Q  201 acctctttcctttttccttaggggataaagttagtgctttgtttctttcattagaagtcggttctatcatttcatggcaacaaatgaggc 290  Q
    |||||||||||||||||||| |||||| || ||||||||  |||| ||||||   | | |||||||||| ||||||| | ||||||||||    
T  13735366 acctctttcctttttccttaagggatagagctagtgcttgatttcattcattgacaattggttctatcacttcatgggaccaaatgaggc 13735455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 297
Target Start/End: Complemental strand, 14228942 - 14228646
Alignment:
Q  1 cacatcttcagatgagtcatacgatggtattgtgtacataacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaat 100  Q
    ||||||||| |||||| ||||||||| ||||||||||  |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  14228942 cacatcttctgatgagccatacgatgctattgtgtacccaacggttgagggtaataattttgaaataaaacctgcacttatttccttagtgcagcagaat 14228843  T
Q  101 caatttttcggatcacccactgagaattcgaattttcatatttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctac 200  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||| |    
T  14228842 caatttttcggatcacccactgaggatccgaattttcatatttcaacttttctaagactcagtggaactttgaaggcaaaccaagaggccgtaaggctgc 14228743  T
Q  201 acctctttcctttttccttaggggataaagttagtgctttgtttctttcattagaagtcggttctatcatttcatggcaacaaatgaggcaagcttt 297  Q
    |||||||||||||||||| | |||||| || |||||||| ||||| ||||||   | | |||||||||| ||||||| | |||||||||| ||||||    
T  14228742 acctctttcctttttcctcaagggatagagctagtgcttggtttcattcattgacaattggttctatcacttcatgggaccaaatgaggcgagcttt 14228646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 297
Target Start/End: Complemental strand, 16329873 - 16329577
Alignment:
Q  1 cacatcttcagatgagtcatacgatggtattgtgtacataacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaat 100  Q
    ||||||||| |||||| ||||||||| ||||||||||  |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  16329873 cacatcttctgatgagccatacgatgctattgtgtacccaacggttgagggtaataattttgaaataaaacctgcacttattttcttagtgcagcagaat 16329774  T
Q  101 caatttttcggatcacccactgagaattcgaattttcatatttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctac 200  Q
    |||||||||||||||||||||||| ||  |||||||||||||||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||| |    
T  16329773 caatttttcggatcacccactgaggatctgaattttcatatttcaacttttctaagactcagtggaactttgaaggcaaaccaagaggccgtaaggctgc 16329674  T
Q  201 acctctttcctttttccttaggggataaagttagtgctttgtttctttcattagaagtcggttctatcatttcatggcaacaaatgaggcaagcttt 297  Q
    |||||||||||||||||||| |||||| || |||||||| ||||| ||||||   | | |||||||||| ||||||| | |||||||||| ||||||    
T  16329673 acctctttcctttttccttaagggatagagctagtgcttggtttcattcattgacaattggttctatcacttcatgggaccaaatgaggcgagcttt 16329577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 1 - 297
Target Start/End: Complemental strand, 544124 - 543828
Alignment:
Q  1 cacatcttcagatgagtcatacgatggtattgtgtacataacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaat 100  Q
    ||||||||| |||||| |||||||||  |||||| ||  |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  544124 cacatcttctgatgagccatacgatgccattgtgcacccaacggttgcgggtaataattttgaaataaaacctgcacttatttacttagtgcagcagaat 544025  T
Q  101 caatttttcggatcacccactgagaattcgaattttcatatttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctac 200  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||| |    
T  544024 caatttttcggatcacccactgaggatccgaattttcatatttcaacttttctaagactcagtggaactttgaaggcaaaccaagaggccgtaaggctgc 543925  T
Q  201 acctctttcctttttccttaggggataaagttagtgctttgtttctttcattagaagtcggttctatcatttcatggcaacaaatgaggcaagcttt 297  Q
    |||||||||||||||||||| |||||| || |||||||| ||||| ||||||   | | |||||||||| ||||||| | ||||| |||| ||||||    
T  543924 acctctttcctttttccttaagggatagagctagtgcttggtttcattcattgacaattggttctatcacttcatgggaccaaataaggcgagcttt 543828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 3 - 301
Target Start/End: Complemental strand, 8786303 - 8786008
Alignment:
Q  3 catcttcagatgagtcatacgatggtattgtgtacataacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaatca 102  Q
    ||||||||||||  ||||||| || ||||||||||  ||| ||| |||   | |||||||||||||| ||||||||||||||||||||||| || |||||    
T  8786303 catcttcagatgtatcatacgttgttattgtgtacccaacagttaagg---acaattttgaaataaaacctgcacttatttacttagtgcatcaaaatca 8786207  T
Q  103 atttttcggatcacccactgagaattcgaattttcatatttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctacac 202  Q
    |||||||||||||| ||||||| || ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| ||||||||||||| |||    
T  8786206 atttttcggatcactcactgaggatccgaattttcatatttcaacttttttaagactcagtggaaccttgaaggcaaaccaagaggccgtaaggctgcac 8786107  T
Q  203 ctctttcctttttccttaggggataaagttagtgctttgtttctttcattagaagtcggttctatcatttcatggcaacaaatgaggcaagcttttctt 301  Q
    |||||||||||||||||| |||||| || |||||||| ||||| |||||| |||||||||||||||| |||||||||| ||||||||||||||||||||    
T  8786106 ctctttcctttttccttaagggatagagctagtgcttggtttcattcattggaagtcggttctatcacttcatggcaaaaaatgaggcaagcttttctt 8786008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 176; E-Value: 8e-95
Query Start/End: Original strand, 3 - 294
Target Start/End: Complemental strand, 4464789 - 4464499
Alignment:
Q  3 catcttcagatgagtcatacgatggtattgtgtacataacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaatca 102  Q
    |||||||||||||| |||||| || |||| ||||| ||||||||||||  ||||||||||||||||| |||||||||||||||||||||||||| |||||    
T  4464789 catcttcagatgagccatacgctgttattatgtacctaacggttgaggacaataattttgaaataaaacctgcacttatttacttagtgcagcaaaatca 4464690  T
Q  103 atttttcggatcacccactgagaattcgaattttcatatttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctacac 202  Q
    |||||||||||||||||||||| || ||||| ||||||||||||||||| ||| |||||||||||||||||||||||||||| | ||||||||||| |||    
T  4464689 atttttcggatcacccactgaggatccgaatcttcatatttcaacttttttaagactcagtggaaccttgaaggcaaaccaaga-gccgtaaggctgcac 4464591  T
Q  203 ctctttcctttttccttaggggataaagttagtgctttgtttctttcattagaagtcggttctatcatttcatggcaacaaatgaggcaagc 294  Q
    ||||||||||||||||||||||||| || ||||||||  |||| |||||| ||||| |||||||| | ||||||| | ||||||||||||||    
T  4464590 ctctttcctttttccttaggggatagagctagtgcttgttttcattcattggaagttggttctattacttcatgggaccaaatgaggcaagc 4464499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 1 - 297
Target Start/End: Original strand, 14546653 - 14546949
Alignment:
Q  1 cacatcttcagatgagtcatacgatggtattgtgtacataacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaat 100  Q
    |||||||||||||||| | ||||||| ||||||||||  || ||||||||||| ||| ||||||||||| ||||||||||||||| |||||||||| |||    
T  14546653 cacatcttcagatgagccgtacgatgctattgtgtacccaatggttgagggtagtaaatttgaaataaagcctgcacttatttacctagtgcagcaaaat 14546752  T
Q  101 caatttttcggatcacccactgagaattcgaattttcatatttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctac 200  Q
    |||||||||||||||||||||||| |||||||| ||||| |||||| |||| |||||||||||||||| ||||||||||||||| ||||||||||||| |    
T  14546753 caatttttcggatcacccactgaggattcgaatcttcatgtttcaaattttttaaaactcagtggaactttgaaggcaaaccaagaggccgtaaggctgc 14546852  T
Q  201 acctctttcctttttccttaggggataaagttagtgctttgtttctttcattagaagtcggttctatcatttcatggcaacaaatgaggcaagcttt 297  Q
    |||||||||||||||||||| |||||| || |||||||| ||||| ||||||     | |||||||||| ||||||| | |||||||||| ||||||    
T  14546853 acctctttcctttttccttaagggatagagctagtgcttggtttcattcattgactattggttctatcacttcatgggaccaaatgaggcgagcttt 14546949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 1 - 302
Target Start/End: Complemental strand, 16153922 - 16153621
Alignment:
Q  1 cacatcttcagatgagtcatacgatggtattgtgtacataacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaat 100  Q
    |||||||||||||||||| ||||||| ||||||||||  |||||||||||||| ||| ||||||||||| ||||||||||||||| |||||||||| |||    
T  16153922 cacatcttcagatgagtcgtacgatgctattgtgtacccaacggttgagggtagtaaatttgaaataaagcctgcacttatttacctagtgcagcaaaat 16153823  T
Q  101 caatttttcggatcacccactgagaattcgaattttcatatttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctac 200  Q
    |||||||||||||||||||||||| || ||||| ||||| |||||| |||||||| |||||||||||| ||||||||||||||| |||||||||| || |    
T  16153822 caatttttcggatcacccactgaggatccgaatcttcatgtttcaatttttctaagactcagtggaactttgaaggcaaaccaagaggccgtaagactgc 16153723  T
Q  201 acctctttcctttttccttaggggataaagttagtgctttgtttctttcattagaagtcggttctatcatttcatggcaacaaatgaggcaagcttttct 300  Q
    ||||||||||||| || ||  |||||| || |||||||| ||||| ||||||  || | |||||||||| ||||||| | ||||||||| | || |||||    
T  16153722 acctctttcctttctctttgagggatagagctagtgcttggtttcattcattgcaaattggttctatcacttcatggaaccaaatgaggaaggcatttct 16153623  T
Q  301 tt 302  Q
    ||    
T  16153622 tt 16153621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 1 - 289
Target Start/End: Original strand, 4308798 - 4309086
Alignment:
Q  1 cacatcttcagatgagtcatacgatggtattgtgtacataacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaat 100  Q
    |||||||||||||||| ||||||||| ||||||||||  |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||    
T  4308798 cacatcttcagatgagccatacgatgctattgtgtacccaacggttgagggtaataattttgaaataaagcctgcacttatttacttagtgcagcaaaat 4308897  T
Q  101 caatttttcggatcacccactgagaattcgaattttcatatttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctac 200  Q
    |||||||||||||||||||||||| ||  | || ||||| |||||| |||| ||| |||||||||||| ||||||||||||||| ||| ||||||||| |    
T  4308898 caatttttcggatcacccactgaggatctgtatcttcatgtttcaatttttttaagactcagtggaactttgaaggcaaaccaagaggtcgtaaggctgc 4308997  T
Q  201 acctctttcctttttccttaggggataaagttagtgctttgtttctttcattagaagtcggttctatcatttcatggcaacaaatgagg 289  Q
    ||||||||||||| || ||  |||||| || |||||||| ||||| ||||||  || | |||||||||| ||||||| | |||||||||    
T  4308998 acctctttcctttctctttgagggatagagctagtgcttggtttcattcattgcaaattggttctatcacttcatgggatcaaatgagg 4309086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 1 - 297
Target Start/End: Original strand, 23511266 - 23511562
Alignment:
Q  1 cacatcttcagatgagtcatacgatggtattgtgtacataacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaat 100  Q
    |||||||||||||||| | ||||||| ||||||||||  ||||||||||| || ||| ||||||||||| ||||||||||||||| |||||||||| |||    
T  23511266 cacatcttcagatgagccgtacgatgctattgtgtacccaacggttgaggatagtaaatttgaaataaagcctgcacttatttacctagtgcagcaaaat 23511365  T
Q  101 caatttttcggatcacccactgagaattcgaattttcatatttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctac 200  Q
    |||||||||||||||||||||||| || ||||| ||||| |||||| |||| |||||||||||||||| ||||||||||||||| ||||||||||||| |    
T  23511366 caatttttcggatcacccactgaggatccgaatcttcatgtttcaaattttttaaaactcagtggaactttgaaggcaaaccaagaggccgtaaggctgc 23511465  T
Q  201 acctctttcctttttccttaggggataaagttagtgctttgtttctttcattagaagtcggttctatcatttcatggcaacaaatgaggcaagcttt 297  Q
    |||||||||||||||||||| |||||| || |||||||| ||||| ||||||     | | |||||||| ||||||| | |||||||||| ||||||    
T  23511466 acctctttcctttttccttaagggatagagctagtgcttggtttcattcattgactattgattctatcacttcatgggaccaaatgaggcgagcttt 23511562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 1 - 302
Target Start/End: Complemental strand, 13683 - 13382
Alignment:
Q  1 cacatcttcagatgagtcatacgatggtattgtgtacataacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaat 100  Q
    |||||||||||||||| | ||||||| ||||||||||  |||||||||||||| ||| ||||||||||| ||||||||||||||| |||||||||| |||    
T  13683 cacatcttcagatgagccgtacgatgctattgtgtacccaacggttgagggtagtaaatttgaaataaagcctgcacttatttacctagtgcagcaaaat 13584  T
Q  101 caatttttcggatcacccactgagaattcgaattttcatatttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctac 200  Q
    |||||||| ||||||||| ||||| || ||||| ||||| |||||| |||||||| ||||| |||||| ||||||||||||||| |||||||||||||||    
T  13583 caattttttggatcacccgctgaggatccgaatcttcatgtttcaatttttctaagactcattggaactttgaaggcaaaccaagaggccgtaaggctac 13484  T
Q  201 acctctttcctttttccttaggggataaagttagtgctttgtttctttcattagaagtcggttctatcatttcatggcaacaaatgaggcaagcttttct 300  Q
    ||||||||||||| || ||  |||||| || |||||||| ||||| ||||||  || | |||||||||| ||||||| | ||||||||| | || |||||    
T  13483 acctctttcctttctctttgagggatagagctagtgcttggtttcattcattgcaaattggttctatcacttcatggaaccaaatgaggaaggcatttct 13384  T
Q  301 tt 302  Q
    ||    
T  13383 tt 13382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 1 - 302
Target Start/End: Original strand, 9579150 - 9579451
Alignment:
Q  1 cacatcttcagatgagtcatacgatggtattgtgtacataacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaat 100  Q
    |||||||||||||||| | ||||||  ||||||||||  ||||||||||| || ||| ||||||||||| ||||||||||||||| | |||||||| |||    
T  9579150 cacatcttcagatgagccgtacgatactattgtgtacccaacggttgaggatattaaatttgaaataaagcctgcacttatttacctggtgcagcaaaat 9579249  T
Q  101 caatttttcggatcacccactgagaattcgaattttcatatttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctac 200  Q
    |||||||||||||||||||||||| || ||||||||||| ||||||||||| ||| |||||||||||| ||||||||||||||| ||||||||||||| |    
T  9579250 caatttttcggatcacccactgaggatccgaattttcatgtttcaacttttttaagactcagtggaactttgaaggcaaaccaagaggccgtaaggctgc 9579349  T
Q  201 acctctttcctttttccttaggggataaagttagtgctttgtttctttcattagaagtcggttctatcatttcatggcaacaaatgaggcaagcttttct 300  Q
    ||||||||||||| || ||  |||||| || |||||||| ||||| ||||||  || | |||||||||| ||||| | | ||||||||| | || |||||    
T  9579350 acctctttcctttctctttgagggatagagctagtgcttggtttcattcattgcaaattggttctatcacttcatagaatcaaatgaggaaggcatttct 9579449  T
Q  301 tt 302  Q
    ||    
T  9579450 tt 9579451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 1 - 302
Target Start/End: Original strand, 9727018 - 9727319
Alignment:
Q  1 cacatcttcagatgagtcatacgatggtattgtgtacataacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaat 100  Q
    |||||||||||||||| | ||||||  ||||||||||  ||||||||||| || ||| ||||||||||| ||||||||||||||| | |||||||| |||    
T  9727018 cacatcttcagatgagccgtacgatactattgtgtacccaacggttgaggatattaaatttgaaataaagcctgcacttatttacctggtgcagcaaaat 9727117  T
Q  101 caatttttcggatcacccactgagaattcgaattttcatatttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctac 200  Q
    |||||||||||||||||||||||| || ||||||||||| ||||||||||| ||| |||||||||||| ||||||||||||||| ||||||||||||| |    
T  9727118 caatttttcggatcacccactgaggatccgaattttcatgtttcaacttttttaagactcagtggaactttgaaggcaaaccaagaggccgtaaggctgc 9727217  T
Q  201 acctctttcctttttccttaggggataaagttagtgctttgtttctttcattagaagtcggttctatcatttcatggcaacaaatgaggcaagcttttct 300  Q
    ||||||||||||| || ||  |||||| || |||||||| ||||| ||||||  || | |||||||||| ||||| | | ||||||||| | || |||||    
T  9727218 acctctttcctttctctttgagggatagagctagtgcttggtttcattcattgcaaattggttctatcacttcatagaatcaaatgaggaaggcatttct 9727317  T
Q  301 tt 302  Q
    ||    
T  9727318 tt 9727319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 302
Target Start/End: Complemental strand, 15296435 - 15296134
Alignment:
Q  1 cacatcttcagatgagtcatacgatggtattgtgtacataacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaat 100  Q
    ||||| |||||| ||| | ||||||| ||||||||||   |||||||||| || ||| ||||||||||| ||||||||||||||| | |||||||| |||    
T  15296435 cacatattcagaagagccgtacgatgctattgtgtaccctacggttgaggatattaaatttgaaataaagcctgcacttatttacctggtgcagcaaaat 15296336  T
Q  101 caatttttcggatcacccactgagaattcgaattttcatatttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctac 200  Q
    |||||||||||||||||||||||| || | ||||||||||||| || |||| ||| | ||| |||||| ||||||| ||||||| ||||||||||||| |    
T  15296335 caatttttcggatcacccactgaggatccaaattttcatatttaaaattttataagaatcaatggaactttgaaggaaaaccaagaggccgtaaggctgc 15296236  T
Q  201 acctctttcctttttccttaggggataaagttagtgctttgtttctttcattagaagtcggttctatcatttcatggcaacaaatgaggcaagcttttct 300  Q
    ||||||||||||| || ||  |||||| || |||||||| ||||| ||||||  || | |||||||||| ||||||| | ||||||||| | || |||||    
T  15296235 acctctttcctttctctttgagggatagagctagtgcttggtttcattcattgcaaattggttctatcacttcatggaaccaaatgaggaaggcatttct 15296136  T
Q  301 tt 302  Q
    ||    
T  15296135 tt 15296134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 1 - 289
Target Start/End: Original strand, 12563089 - 12563378
Alignment:
Q  1 cacatcttcagatgagtcatacgatggtattgtgtacataacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaat 100  Q
    |||||||||||||||| | ||||||| ||||||||||  || |||||| |||| ||| |||| ||||||  |||||||||||||| ||||| |||| |||    
T  12563089 cacatcttcagatgagccgtacgatgctattgtgtacccaatggttgatggtattaaatttggaataaagtctgcacttatttacctagtgtagcaaaat 12563188  T
Q  101 caatttttcggatcacccactgagaattcgaattttcatatttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctac 200  Q
    ||||||||||||||| |||||||| || ||||| ||||| |||||| |||| ||| |||||||||||| || |||||||||||| |||  |||||| | |    
T  12563189 caatttttcggatcatccactgaggatccgaatcttcatgtttcaaattttttaagactcagtggaactttaaaggcaaaccaagaggttgtaaggtttc 12563288  T
Q  201 acctctttcctttttccttag-gggataaagttagtgctttgtttctttcattagaagtcggttctatcatttcatggcaacaaatgagg 289  Q
    |||| ||| |||| || || | |||||| || |||||||| ||||| ||||||  || | ||||||||||  |||||| | |||||||||    
T  12563289 acctattttctttctcttttgagggatagagatagtgcttggtttcattcattgcaaattggttctatcacgtcatgggaccaaatgagg 12563378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 23205139 - 23205261
Alignment:
Q  1 cacatcttcagatgagtcatacgatggtattgtgtacataacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaat 100  Q
    |||||||||||||||| | ||||||| ||||||||||  ||||||||||| || ||| ||||||||||| ||||||||||||||| |||||||||| |||    
T  23205139 cacatcttcagatgagccgtacgatgctattgtgtacccaacggttgaggatagtaaatttgaaataaagcctgcacttatttacctagtgcagcaaaat 23205238  T
Q  101 caatttttcggatcacccactga 123  Q
    |||||||||||||||||||||||    
T  23205239 caatttttcggatcacccactga 23205261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 40 - 289
Target Start/End: Original strand, 13653095 - 13653344
Alignment:
Q  40 aacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaatcaatttttcggatcacccactgagaattcgaattttcat 139  Q
    ||||||||||||||| |||||||| || || ||||||||  |  | ||||||||||| ||||| ||||  ||||||||||||||| || | ||| | |||    
T  13653095 aacggttgagggtaacaattttgagatcaagcctgcactactcaatttagtgcagcaaaatcagttttctggatcacccactgaggatccaaatctccat 13653194  T
Q  140 atttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctacacctctttcctttttccttaggggataaagttagtgctt 239  Q
    |||||  | || || | ||||||||| ||  | || |  |||||| | |||||||| || || |||||||| ||||||||| |||||| || ||| ||||    
T  13653195 atttcttccttccttagactcagtggcactataaaagtgaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctagcgctt 13653294  T
Q  240 tgtttctttcattagaagtcggttctatcatttcatggcaacaaatgagg 289  Q
     ||| | |||  ||||||||||||| |||| ||||||| | |||||||||    
T  13653295 ggttccattccctagaagtcggttccatcacttcatgggatcaaatgagg 13653344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 40 - 277
Target Start/End: Original strand, 18275115 - 18275352
Alignment:
Q  40 aacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaatcaatttttcggatcacccactgagaattcgaattttcat 139  Q
    |||||||| ||||||||| || ||||| || ||||||||  |  | ||||||||||| ||||| ||||  ||||||||||||||| || | ||| | |||    
T  18275115 aacggttgcgggtaataacttcgaaatcaagcctgcactactcaatttagtgcagcaaaatcagttttctggatcacccactgaggatccaaatctccat 18275214  T
Q  140 atttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctacacctctttcctttttccttaggggataaagttagtgctt 239  Q
    |||||  | ||||| | ||| ||||| ||| | || |  |||||| | |||||||| || || |||||||| ||||||||| |||||| || ||| ||||    
T  18275215 atttcttcctttcttagacttagtggcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctagcgctt 18275314  T
Q  240 tgtttctttcattagaagtcggttctatcatttcatgg 277  Q
     ||| | |||  ||||||||||||| || | |||||||    
T  18275315 ggttccattccctagaagtcggttccattacttcatgg 18275352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 277
Target Start/End: Original strand, 13668927 - 13669164
Alignment:
Q  40 aacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaatcaatttttcggatcacccactgagaattcgaattttcat 139  Q
    |||||||| ||||||||| || || || || ||||||||  |  | ||||||||||| || || ||||  ||||||||||||||| || | ||| | |||    
T  13668927 aacggttgcgggtaataacttcgagatcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatacaaatctccat 13669026  T
Q  140 atttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctacacctctttcctttttccttaggggataaagttagtgctt 239  Q
    |||||  | || || | ||||||||| ||| | || |  |||||| | |||||||| || || |||||||| ||||||||| |||||| || ||| ||||    
T  13669027 atttcttccttccttagactcagtggcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctagcgctt 13669126  T
Q  240 tgtttctttcattagaagtcggttctatcatttcatgg 277  Q
     ||| | |||  ||||||||||||| || | |||||||    
T  13669127 ggttccattccctagaagtcggttccattacttcatgg 13669164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 277
Target Start/End: Complemental strand, 16470628 - 16470395
Alignment:
Q  44 gttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaatcaatttttcggatcacccactgagaattcgaattttcatattt 143  Q
    |||||||||||||| || || || || ||||||||  |  | || |||||||| ||||||||||  ||||||||||||||| || | ||| | |||||||    
T  16470628 gttgagggtaataacttcgagatcaagcctgcactactcaatttggtgcagcaaaatcaattttctggatcacccactgaggatccaaatctccatattt 16470529  T
Q  144 caacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctacacctctttcctttttccttaggggataaagttagtgctttgtt 243  Q
    |  | || || | ||||||||| ||| | || |  |||||| | |||||||| || || |||||||| ||||||||| |||||| || ||| |||| |||    
T  16470528 cttccttccttagactcagtggcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctagcgcttggtt 16470429  T
Q  244 tctttcattagaagtcggttctatcatttcatgg 277  Q
     | | |  ||||||| ||||| |||| |||||||    
T  16470428 ccataccctagaagttggttccatcacttcatgg 16470395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 179 - 290
Target Start/End: Original strand, 16527237 - 16527348
Alignment:
Q  179 aaccaaaaggccgtaaggctacacctctttcctttttccttaggggataaagttagtgctttgtttctttcattagaagtcggttctatcatttcatggc 278  Q
    |||||| | |||||||| || || |||||||| |||| |||| |||||| || ||| |||| ||| | |||  ||||||||||||| |||| |||||||     
T  16527237 aaccaagaagccgtaagacttcatctctttccctttttcttaagggatagagctagcgcttggttccattccctagaagtcggttccatcacttcatggg 16527336  T
Q  279 aacaaatgaggc 290  Q
    | ||||||||||    
T  16527337 atcaaatgaggc 16527348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 86 - 277
Target Start/End: Complemental strand, 18598399 - 18598208
Alignment:
Q  86 ttagtgcagcagaatcaatttttcggatcacccactgagaattcgaattttcatatttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaa 185  Q
    ||||||||||| || || ||||  ||||||||||||||| || | ||| | ||||||||  | || || | ||||||||| ||| | || |  ||||||     
T  18598399 ttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccatatttcttccttccttagactcagtggcaccataaaagagaaccaat 18598300  T
Q  186 aggccgtaaggctacacctctttcctttttccttaggggataaagttagtgctttgtttctttcattagaagtcggttctatcatttcatgg 277  Q
    | |||||||| || || |||||||| ||||||||| |||||| || ||| |||| ||| | |||  ||||||||||||| || | |||||||    
T  18598299 aagccgtaagacttcatctctttcccttttccttaagggatagagctagcgcttggttccattccctagaagtcggttccattacttcatgg 18598208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 186; Significance: 1e-101; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 290
Target Start/End: Complemental strand, 16252 - 15963
Alignment:
Q  1 cacatcttcagatgagtcatacgatggtattgtgtacataacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaat 100  Q
    ||||||||| |||||| ||||||||| ||||||||||  |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  16252 cacatcttctgatgagccatacgatgctattgtgtacccaacggttgagggtaataattttgaaataaaacctgcacttatttccttagtgcagcagaat 16153  T
Q  101 caatttttcggatcacccactgagaattcgaattttcatatttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctac 200  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||| |    
T  16152 caatttttcggatcacccactgaggatccgaattttcatatttcaacttttctaagactcagtggaactttgaaggcaaaccaagaggccgtaaggctgc 16053  T
Q  201 acctctttcctttttccttaggggataaagttagtgctttgtttctttcattagaagtcggttctatcatttcatggcaacaaatgaggc 290  Q
    |||||||||||||||||||| |||||| || |||||||| ||||| ||||||   | | |||||||||| ||||||| | ||||||||||    
T  16052 acctctttcctttttccttaagggatagagctagtgcttggtttcattcattgacaattggttctatcacttcatgggaccaaatgaggc 15963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 1 - 297
Target Start/End: Original strand, 25353045 - 25353341
Alignment:
Q  1 cacatcttcagatgagtcatacgatggtattgtgtacataacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaat 100  Q
    |||||||||||||||| ||||||||| ||||||||||  |||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| |||    
T  25353045 cacatcttcagatgagccatacgatgctattgtgtacccaacggttgagggtaataattttgaaataaagcctgcacttatttaattagtgcagcaaaat 25353144  T
Q  101 caatttttcggatcacccactgagaattcgaattttcatatttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctac 200  Q
    ||||||||||||| ||||||||||||| ||||| ||||| |||||| |||| ||| |||||||||||| ||||||||||||||| ||||||||||  | |    
T  25353145 caatttttcggattacccactgagaatccgaatcttcatgtttcaatttttttaagactcagtggaactttgaaggcaaaccaagaggccgtaagaatgc 25353244  T
Q  201 acctctttcctttttccttaggggataaagttagtgctttgtttctttcattagaagtcggttctatcatttcatggcaacaaatgaggcaagcttt 297  Q
    |||||||||||||||||| | |||||| || |||||||| ||||| ||||||   | | |||||||||| ||||||| | |||||||||| ||||||    
T  25353245 acctctttcctttttcctaaagggatagagctagtgcttggtttcattcattgacaattggttctatcacttcatgggaccaaatgaggcgagcttt 25353341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 1 - 297
Target Start/End: Original strand, 25359323 - 25359619
Alignment:
Q  1 cacatcttcagatgagtcatacgatggtattgtgtacataacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaat 100  Q
    |||||||||||||||| | ||||||| ||||||||||  |||||||||||||| ||| ||||||||||| ||||||||||||||| |||||||||| |||    
T  25359323 cacatcttcagatgagccgtacgatgctattgtgtacccaacggttgagggtagtaaatttgaaataaagcctgcacttatttacctagtgcagcaaaat 25359422  T
Q  101 caatttttcggatcacccactgagaattcgaattttcatatttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctac 200  Q
    |||||||||||||||||||||||| || ||||| ||||| |||||| |||| |||||||||||||||| ||||||||||||||| ||||||||||||| |    
T  25359423 caatttttcggatcacccactgaggatccgaatcttcatgtttcaaattttttaaaactcagtggaactttgaaggcaaaccaagaggccgtaaggctgc 25359522  T
Q  201 acctctttcctttttccttaggggataaagttagtgctttgtttctttcattagaagtcggttctatcatttcatggcaacaaatgaggcaagcttt 297  Q
    |||||||||||||||||||| |||||| || |||||||| ||||| ||||||     | |||||||||| ||||||| | |||||||||| ||||||    
T  25359523 acctctttcctttttccttaagggatagagctagtgcttggtttcattcattgactattggttctatcacttcatgggaccaaatgaggcgagcttt 25359619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 28 - 258
Target Start/End: Complemental strand, 24370458 - 24370228
Alignment:
Q  28 tattgtgtacataacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaatcaatttttcggatcacccactgagaat 127  Q
    ||||||||||  || ||||||| |||| ||||||||||| || | ||||||| || |||| |||||||| |||||||||| |||||||||||||||| ||    
T  24370458 tattgtgtacccaatggttgagagtaacaattttgaaattaagcatgcacttcttaacttggtgcagcaaaatcaattttccggatcacccactgaggat 24370359  T
Q  128 tcgaattttcatatttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctacacctctttcctttttccttaggggata 227  Q
      |||| ||||||||||||||||  ||| |||||||||||| ||||| | ||||||| | ||||||||||| |||||| |||||||||| ||| ||||||    
T  24370358 cggaatcttcatatttcaactttcttaagactcagtggaactttgaaagaaaaccaagaagccgtaaggctgcacctcattcctttttctttaagggata 24370259  T
Q  228 aagttagtgctttgtttctttcattagaagt 258  Q
     || || ||| | ||||| ||||||| ||||    
T  24370258 gagctaatgcatggtttccttcattacaagt 24370228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 28 - 292
Target Start/End: Complemental strand, 24176697 - 24176433
Alignment:
Q  28 tattgtgtacataacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaatcaatttttcggatcacccactgagaat 127  Q
    ||||||||||  ||||||||||||||| || ||||| || || ||||||||  || |||| |||||||| ||||| ||||  ||||| ||| ||||| ||    
T  24176697 tattgtgtacccaacggttgagggtaacaactttgagattaagcctgcactacttaacttggtgcagcaaaatcagttttctggatcgcccgctgaggat 24176598  T
Q  128 tcgaattttcatatttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctacacctctttcctttttccttaggggata 227  Q
     | ||| | ||||| ||||||||||||| |||||| ||||||||||| || || ||| | ||||||||| | |||||||||||||| |||||| ||||||    
T  24176597 ccaaatctgcatatctcaacttttctaagactcagcggaaccttgaaagcgaatcaataagccgtaaggatgcacctctttcctttctccttaagggata 24176498  T
Q  228 aagttagtgctttgtttctttcattagaagtcggttctatcatttcatggcaacaaatgaggcaa 292  Q
     || ||||| || ||| | |||||||||||| ||||| |||| ||||||| |  |||||||||||    
T  24176497 gagctagtgtttggttccattcattagaagttggttccatcacttcatgggataaaatgaggcaa 24176433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 11 - 294
Target Start/End: Original strand, 29952615 - 29952897
Alignment:
Q  11 gatgagtcatacgatggtattgtgtacataacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaatcaatttttcg 110  Q
    |||||| || ||| || ||||||||||  |||| |||| |  |||||||||||||| || ||||||||  |  | ||||||||||| |||||||||| ||    
T  29952615 gatgagccacacgttgttattgtgtactcaacgattgaagaaaataattttgaaatcaagcctgcactactaaatttagtgcagcaaaatcaattttccg 29952714  T
Q  111 gatcacccactgagaattcgaattttcatatttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctacacctctttcc 210  Q
    ||| |||||||||| || ||||| |||||||| | |||||  ||| |||||||||||| ||||| ||||||||| ||||||||||||| ||||| |||||    
T  29952715 gattacccactgaggatccgaatcttcatattgctacttta-taagactcagtggaactttgaaagcaaaccaagaggccgtaaggctgcacctatttcc 29952813  T
Q  211 tttttccttaggggataaagttagtgctttgtttctttcattagaagtcggttctatcatttcatggcaacaaatgaggcaagc 294  Q
    ||| || ||| | |||| || |||||  | ||||  ||||||  ||   |||||||| | ||||||| | ||||||||||||||    
T  29952814 tttctctttaagagatagagctagtgtgtggttttattcattgcaaaatggttctattacttcatgggaccaaatgaggcaagc 29952897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 28 - 294
Target Start/End: Complemental strand, 20356 - 20090
Alignment:
Q  28 tattgtgtacataacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaatcaatttttcggatcacccactgagaat 127  Q
    ||||||||||  ||||||||||||||| || ||||| || || ||||||||  || |||| |||||||| ||||| ||||  ||||||||  ||||| ||    
T  20356 tattgtgtacccaacggttgagggtaacaactttgagatcaagcctgcactacttaacttggtgcagcaaaatcagttttctggatcacctgctgaggat 20257  T
Q  128 tcgaattttcatatttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctacacctctttcctttttccttaggggata 227  Q
     | ||| | ||||| ||||| ||| ||| |||||| ||||||||||| || || ||| | | ||||||||| ||||| ||||||||  ||||| ||||||    
T  20256 ccaaatctgcatatctcaacgtttttaagactcagcggaaccttgaaagcgaatcaagaagtcgtaaggctgcacctttttcctttcaccttaagggata 20157  T
Q  228 aagttagtgctttgtttctttcattagaagtcggttctatcatttcatggcaacaaatgaggcaagc 294  Q
     || | |||||| ||| | |||||| ||||| ||||| |||| ||||||| | ||||||||||||||    
T  20156 gagctggtgcttggttccattcattggaagttggttccatcacttcatgggatcaaatgaggcaagc 20090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 40 - 119
Target Start/End: Original strand, 23714140 - 23714219
Alignment:
Q  40 aacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaatcaatttttcggatcaccca 119  Q
    ||||||||||||||| ||||||||||||||  ||||||||||||||||||||||||| |||||||||| | |||||||||    
T  23714140 aacggttgagggtaacaattttgaaataaagactgcacttatttacttagtgcagcaaaatcaattttcccgatcaccca 23714219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 57 - 174
Target Start/End: Complemental strand, 25592305 - 25592188
Alignment:
Q  57 attttgaaataaatcctgcacttatttacttagtgcagcagaatcaatttttcggatcacccactgagaattcgaattttcatatttcaacttttctaaa 156  Q
    |||||||||| ||  |||||||| || | |||||||| || |||||||||| |||||||||||||||| || ||||  |||||||| | ||||||||||     
T  25592305 attttgaaatcaaatctgcacttcttaatttagtgcaacaaaatcaattttccggatcacccactgaggatccgaaacttcatattgctacttttctaag 25592206  T
Q  157 actcagtggaaccttgaa 174  Q
    |||||||||||| |||||    
T  25592205 actcagtggaactttgaa 25592188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 43 - 294
Target Start/End: Complemental strand, 21343496 - 21343246
Alignment:
Q  43 ggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaatcaatttttcggatcacccactgagaattcgaattttcatatt 142  Q
    |||||||||||| || ||||| || || ||||||||  || |||| ||| |||| ||||| ||||  ||||||||  ||||| || | ||| | |||||     
T  21343496 ggttgagggtaacaactttgagatcaagcctgcactacttaacttggtgtagcaaaatcagttttctggatcacctgctgaggatccaaatctgcatatc 21343397  T
Q  143 tcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctacacctctttcctttttccttaggggataaagttagtgctttgt 242  Q
    ||||| ||| ||| ||| || ||||||||||| || || ||| | ||||||||||| ||||| || ||||  || ||| |||||| || |||||||| ||    
T  21343396 tcaacctttttaagactaagcggaaccttgaaagcgaatcaagaagccgtaaggctgcaccttttcccttcatc-ttaagggatagagctagtgcttggt 21343298  T
Q  243 ttctttcattagaagtcggttctatcatttcatggcaacaaatgaggcaagc 294  Q
    | | |||||| ||||| ||||| |||| ||||||| | ||||||||||||||    
T  21343297 tccattcattggaagttggttccatcacttcatgggatcaaatgaggcaagc 21343246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 40 - 277
Target Start/End: Original strand, 112599 - 112836
Alignment:
Q  40 aacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaatcaatttttcggatcacccactgagaattcgaattttcat 139  Q
    |||||||| ||||||||| || ||||| || ||||||||  |  | || |||||||| ||||| ||||  ||||||||||||||| || | ||| | |||    
T  112599 aacggttgcgggtaataacttcgaaatcaagcctgcactactcaatttggtgcagcaaaatcagttttctggatcacccactgaggatccaaatctccat 112698  T
Q  140 atttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctacacctctttcctttttccttaggggataaagttagtgctt 239  Q
    |||||  | || || | ||||||||  ||| | || |  |||||| | |||||||| || || |||||||| |||||||||||||||| || ||| ||||    
T  112699 atttcttccttccttagactcagtgacaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaggggatagagctagcgctt 112798  T
Q  240 tgtttctttcattagaagtcggttctatcatttcatgg 277  Q
     ||| | |||  ||||||||||||| |||| |||||||    
T  112799 ggttccattccctagaagtcggttccatcacttcatgg 112836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 277
Target Start/End: Original strand, 22289307 - 22289544
Alignment:
Q  40 aacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaatcaatttttcggatcacccactgagaattcgaattttcat 139  Q
    |||||||||||||||||| || || || || ||||||||  |  | || |||||||| ||||| ||||  ||||||||||||||| || | ||  | |||    
T  22289307 aacggttgagggtaataacttcgagattaagcctgcactactcaatttggtgcagcaaaatcagttttctggatcacccactgaggatccaaacctccat 22289406  T
Q  140 atttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctacacctctttcctttttccttaggggataaagttagtgctt 239  Q
     |||| ||||| || | ||||||||| ||| | || |  |||||| | |||||||| || || |||||||| ||||||||| |||||| || ||| ||||    
T  22289407 gtttctactttcctcagactcagtggcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctagcgctt 22289506  T
Q  240 tgtttctttcattagaagtcggttctatcatttcatgg 277  Q
     ||| | |||  ||||||| ||||| |||| |||||||    
T  22289507 ggttccattccctagaagttggttccatcacttcatgg 22289544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 277
Target Start/End: Original strand, 27618657 - 27618894
Alignment:
Q  40 aacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaatcaatttttcggatcacccactgagaattcgaattttcat 139  Q
    |||||||| ||||||||| || ||||| || ||||||||  |  | || |||||||| ||||| ||||  ||||||||||||||| || | ||| | |||    
T  27618657 aacggttgcgggtaataacttcgaaatcaagcctgcactactcaatttggtgcagcaaaatcagttttctggatcacccactgaggatccaaatctccat 27618756  T
Q  140 atttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctacacctctttcctttttccttaggggataaagttagtgctt 239  Q
    |||||  | || |||| ||||||||| ||| | || |  |||||| | |||||||| || || | |||||| ||||||||| |||||| || ||| ||||    
T  27618757 atttcttccttcctaagactcagtggcaccataaaagagaaccaagaagccgtaagacttcatcactttcccttttccttaagggatagagctagcgctt 27618856  T
Q  240 tgtttctttcattagaagtcggttctatcatttcatgg 277  Q
     ||| | |||  ||||||||||||| || | |||||||    
T  27618857 ggttccattccctagaagtcggttccattacttcatgg 27618894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 277
Target Start/End: Original strand, 27622684 - 27622921
Alignment:
Q  40 aacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaatcaatttttcggatcacccactgagaattcgaattttcat 139  Q
    |||||||| ||||||||| || ||||| || ||||||||  |  | ||||||||||| || || ||||  ||||||||||||||| || | ||| | |||    
T  27622684 aacggttgcgggtaataacttcgaaatcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccat 27622783  T
Q  140 atttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctacacctctttcctttttccttaggggataaagttagtgctt 239  Q
    |||||  | || || | ||||||||| ||| | || |  |||||| | |||||||| || || |||||||| ||||||||| |||||| || ||| ||||    
T  27622784 atttcttccttccttagactcagtggcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctagcgctt 27622883  T
Q  240 tgtttctttcattagaagtcggttctatcatttcatgg 277  Q
     ||| | |||  ||||||||||||| || | |||||||    
T  27622884 ggttccattccctagaagtcggttccattacttcatgg 27622921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 277
Target Start/End: Original strand, 16770738 - 16770975
Alignment:
Q  40 aacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaatcaatttttcggatcacccactgagaattcgaattttcat 139  Q
    |||||||| ||||||||| || || || || ||||||||  |  | ||||||||||| || || ||||  ||||||||||||||| || | ||| | |||    
T  16770738 aacggttgcgggtaataacttcgagatcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccat 16770837  T
Q  140 atttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctacacctctttcctttttccttaggggataaagttagtgctt 239  Q
    |||||  | || || | ||||||||| ||| | || |  |||||| | |||||||| || || |||||||| ||||||||| |||||| || ||| ||||    
T  16770838 atttcttccttccttagactcagtggcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctagcgctt 16770937  T
Q  240 tgtttctttcattagaagtcggttctatcatttcatgg 277  Q
     ||| | |||  ||||||||||||| || | |||||||    
T  16770938 ggttccattccctagaagtcggttccattacttcatgg 16770975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 277
Target Start/End: Complemental strand, 24800464 - 24800227
Alignment:
Q  40 aacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaatcaatttttcggatcacccactgagaattcgaattttcat 139  Q
    |||||||| ||||||||| || || || || ||||||||  |  | ||||||||||| || || ||||  ||||||||||||||| || | ||| | |||    
T  24800464 aacggttgcgggtaataacttcgagatcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccat 24800365  T
Q  140 atttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctacacctctttcctttttccttaggggataaagttagtgctt 239  Q
    |||||  | || || | ||||||||| ||| | || |  |||||| | |||||||| || || |||||||| ||||||||| |||||| || ||| ||||    
T  24800364 atttcttccttcctcagactcagtggcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctagcgctt 24800265  T
Q  240 tgtttctttcattagaagtcggttctatcatttcatgg 277  Q
     ||| | |||  ||||||||||||| || | |||||||    
T  24800264 ggttccattccctagaagtcggttccattacttcatgg 24800227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 173; Significance: 5e-93; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 3 - 301
Target Start/End: Original strand, 13623398 - 13623693
Alignment:
Q  3 catcttcagatgagtcatacgatggtattgtgtacataacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaatca 102  Q
    |||||||||||||| |||||| || ||||||||||  ||| ||||   |||| |||||||||||||| ||||||||||||||||||||||| || |||||    
T  13623398 catcttcagatgagccatacgttgttattgtgtacccaacagttg---gtaacaattttgaaataaaacctgcacttatttacttagtgcatcaaaatca 13623494  T
Q  103 atttttcggatcacccactgagaattcgaattttcatatttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctacac 202  Q
    |||||||| |||||| |||||| || ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||| |||||| | |||    
T  13623495 atttttcgaatcaccaactgaggatccgaattttcatatttcaacttttctaagactcagtggaaccttgaaggcaaaccaagaggctgtaaggatgcac 13623594  T
Q  203 ctctttcctttttccttaggggataaagttagtgctttgtttctttcattagaagtcggttctatcatttcatggcaacaaatgaggcaagcttttctt 301  Q
    |||||||||||||||||| |||||| || |||||||| ||||| |||||| ||| |||||||||||| ||||||||| |||||||||||||||||||||    
T  13623595 ctctttcctttttccttaagggatagagctagtgcttggtttcattcattggaaatcggttctatcacttcatggcaccaaatgaggcaagcttttctt 13623693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 1 - 302
Target Start/End: Complemental strand, 16641730 - 16641429
Alignment:
Q  1 cacatcttcagatgagtcatacgatggtattgtgtacataacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaat 100  Q
    |||||||||||||||| |||| |||| ||||||||||  |||||||||||||| ||| ||||||||||| ||||||||||||||| ||||||||||||||    
T  16641730 cacatcttcagatgagccataagatgatattgtgtacccaacggttgagggtagtaaatttgaaataaagcctgcacttatttacctagtgcagcagaat 16641631  T
Q  101 caatttttcggatcacccactgagaattcgaattttcatatttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctac 200  Q
    |||||||||||||||| ||||||| || ||||| ||||| |||||| |||| ||| |||||||||||| ||||||||||||||| |||||||||| || |    
T  16641630 caatttttcggatcacacactgaggatccgaatcttcatgtttcaatttttttaagactcagtggaactttgaaggcaaaccaagaggccgtaagactgc 16641531  T
Q  201 acctctttcctttttccttaggggataaagttagtgctttgtttctttcattagaagtcggttctatcatttcatggcaacaaatgaggcaagcttttct 300  Q
    ||||||||||||| || ||  |||||| || |||||||| ||||| ||||||  || | ||||||||||  |||||| |  |||||||| | || |||||    
T  16641530 acctctttcctttctctttgagggatagagctagtgcttggtttcattcattgcaaattggttctatcacctcatggaacaaaatgaggaaggcatttct 16641431  T
Q  301 tt 302  Q
    ||    
T  16641430 tt 16641429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 1 - 289
Target Start/End: Complemental strand, 14689906 - 14689629
Alignment:
Q  1 cacatcttcagatgagtcatacgatggtattgtgtacataacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaat 100  Q
    |||||||||||||||| | |||| || ||||||||||  ||||||||||||||||||           | ||||||||||||||| |||||||||| |||    
T  14689906 cacatcttcagatgagccgtacgttgctattgtgtacccaacggttgagggtaataa-----------aacctgcacttatttacctagtgcagcaaaat 14689818  T
Q  101 caatttttcggatcacccactgagaattcgaattttcatatttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctac 200  Q
    ||||||||| |||||||||||||| || ||||| ||||| |||||| |||| ||| |||||||||||| ||||||||||||||| ||||||||||||| |    
T  14689817 caatttttcagatcacccactgaggatccgaatcttcatgtttcaatttttttaagactcagtggaactttgaaggcaaaccaagaggccgtaaggctgc 14689718  T
Q  201 acctctttcctttttccttaggggataaagttagtgctttgtttctttcattagaagtcggttctatcatttcatggcaacaaatgagg 289  Q
    ||||||||||||| || ||  |||||| || |||||||| ||||| ||||||  || | |||||||||| ||||||| | |||||||||    
T  14689717 acctctttcctttctctttgagggatagagctagtgcttggtttcattcattgaaaattggttctatcacttcatgggaccaaatgagg 14689629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 40 - 294
Target Start/End: Complemental strand, 11921443 - 11921189
Alignment:
Q  40 aacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaatcaatttttcggatcacccactgagaattcgaattttcat 139  Q
    ||||||||| ||||| ||||||||||| || |||| |||  || |||| |||||||| || || |||||||||| |||||||||| || ||||| | |||    
T  11921443 aacggttgaaggtaacaattttgaaattaagcctgaactacttaacttggtgcagcaaaaccagtttttcggattacccactgaggatccgaatctgcat 11921344  T
Q  140 atttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctacacctctttcctttttccttaggggataaagttagtgctt 239  Q
    |||| ||||||| ||| |||||||||||||||||| || ||| || ||||||||||||||||||||||||||||||||||| |||||| || ||||||||    
T  11921343 atttaaacttttttaagactcagtggaaccttgaaagctaactaagaggccgtaaggctacacctctttcctttttccttaagggatagagctagtgctt 11921244  T
Q  240 tgtttctttcattagaagtcggttctatcatttcatggcaacaaatgaggcaagc 294  Q
     ||| | ||||||  |||| ||||| |||| ||||||| | ||| ||||||||||    
T  11921243 ggttccattcattgaaagttggttccatcacttcatgggatcaactgaggcaagc 11921189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 71 - 289
Target Start/End: Complemental strand, 45242950 - 45242731
Alignment:
Q  71 cctgcacttatttacttagtgcagcagaatcaatttttcggatcacccactgagaattcgaattttcatatttcaacttttctaaa-actcagtggaacc 169  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||||||||||| || ||||| ||||| ||| || |||| | || ||||||||||||     
T  45242950 cctgcacttatttacctagtgcagcaaaatcaatttttcggatcacccactgaggatccgaatcttcatgtttgaattttttttaagactcagtggaact 45242851  T
Q  170 ttgaaggcaaaccaaaaggccgtaaggctacacctctttcctttttccttaggggataaagttagtgctttgtttctttcattagaagtcggttctatca 269  Q
    ||||||| ||||||| ||||||||||||| |||||||||||||| || ||  |||||| || |||||||| ||||| ||||||  || | ||||||||||    
T  45242850 ttgaaggaaaaccaagaggccgtaaggctgcacctctttcctttctctttgagggatagagctagtgcttggtttcattcattgcaaattggttctatca 45242751  T
Q  270 tttcatggcaacaaatgagg 289  Q
     ||||||| | |||||||||    
T  45242750 cttcatgggaccaaatgagg 45242731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 289
Target Start/End: Original strand, 18288169 - 18288472
Alignment:
Q  1 cacatcttcagatgagtcatacgatggtattgtgtacataacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaat 100  Q
    |||||||||||||||| | ||||||| |||||||||   ||||||||||| || ||| ||||||||||| | ||||||||||||| |||||||||| |||    
T  18288169 cacatcttcagatgagccgtacgatgctattgtgtaaccaacggttgaggatattaaatttgaaataaaacatgcacttatttacctagtgcagcaaaat 18288268  T
Q  101 caatttttcggatcacccactgagaattc---------------gaattttcatatttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaa 185  Q
    |||||||||||||||||||||||| || |               |||| ||||| |||||| |||| ||| |||||||||||| ||| || |||||||      
T  18288269 caatttttcggatcacccactgaggatccgaatcttcatgttctgaatcttcatgtttcaatttttttaagactcagtggaactttggagacaaaccacg 18288368  T
Q  186 aggccgtaaggctacacctctttcctttttccttaggggataaagttagtgctttgtttctttcattagaagtcggttctatcatttcatggcaacaaat 285  Q
    |||| |||||||| |||||||||||||| || ||  | |||| || ||||| || ||||| ||||||  || | |||||||||| ||||||| | |||||    
T  18288369 aggctgtaaggctgcacctctttcctttctcttttagagatagagctagtgtttggtttcattcattgcaaattggttctatcacttcatgggaccaaat 18288468  T
Q  286 gagg 289  Q
    ||||    
T  18288469 gagg 18288472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 130 - 289
Target Start/End: Complemental strand, 15351833 - 15351674
Alignment:
Q  130 gaattttcatatttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctacacctctttcctttttccttaggggataaa 229  Q
    |||||||||| ||||||||||| ||| |||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||| || ||  |||||| |    
T  15351833 gaattttcatgtttcaacttttttaagactcagtggaactttgaaggcaaaccaagaggccgtaaggctgcacctctttcctttctctttgagggataga 15351734  T
Q  230 gttagtgctttgtttctttcattagaagtcggttctatcatttcatggcaacaaatgagg 289  Q
    | |||||||| ||||| ||||||  || | |||||||| ||||||||| | |||||||||    
T  15351733 gctagtgcttggtttcattcattgaaaattggttctataatttcatgggaccaaatgagg 15351674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 40 - 277
Target Start/End: Original strand, 15249423 - 15249660
Alignment:
Q  40 aacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaatcaatttttcggatcacccactgagaattcgaattttcat 139  Q
    |||||||||||||||||| || || || || ||||||||  |  | ||||||||||| ||||| ||||  ||||||||||||||| || | ||| | |||    
T  15249423 aacggttgagggtaataacttcgagatcaagcctgcactactccatttagtgcagcaaaatcagttttctggatcacccactgaggatccaaatctccat 15249522  T
Q  140 atttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctacacctctttcctttttccttaggggataaagttagtgctt 239  Q
    |||||  | || || | ||||||||| ||| | || |  |||||| | |||||||| || || |||||||| || |||||| |||||| |||||| ||||    
T  15249523 atttcttccttccttagactcagtggcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttctccttaagggatagagttagcgctt 15249622  T
Q  240 tgtttctttcattagaagtcggttctatcatttcatgg 277  Q
     ||| | |||  ||||||||||||| |||| |||||||    
T  15249623 ggttccattccctagaagtcggttccatcacttcatgg 15249660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 277
Target Start/End: Complemental strand, 2270 - 2033
Alignment:
Q  40 aacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaatcaatttttcggatcacccactgagaattcgaattttcat 139  Q
    |||||||  ||||||||| || ||||| || ||||||||  |  | ||||||||||| || || ||||  ||||||||||||||| || | ||| | |||    
T  2270 aacggttacgggtaataacttcgaaatcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccat 2171  T
Q  140 atttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctacacctctttcctttttccttaggggataaagttagtgctt 239  Q
    |||||  | || || | ||||||||| ||| | || |  |||||| | |||||||| || || |||||||| ||||||||| |||||| || ||| ||||    
T  2170 atttcttccttccttagactcagtggcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctagcgctt 2071  T
Q  240 tgtttctttcattagaagtcggttctatcatttcatgg 277  Q
     ||| | |||  ||||||||||||| || | |||||||    
T  2070 ggttccattccctagaagtcggttccattacttcatgg 2033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 277
Target Start/End: Original strand, 22106051 - 22106288
Alignment:
Q  40 aacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaatcaatttttcggatcacccactgagaattcgaattttcat 139  Q
    |||||||| ||||||||| || ||||| || ||||||||  |  | ||||||||||| || || ||||  ||||||||||||||| || | ||| | |||    
T  22106051 aacggttgcgggtaataacttcgaaatcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccat 22106150  T
Q  140 atttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctacacctctttcctttttccttaggggataaagttagtgctt 239  Q
    |||||  | || || | ||||||||| ||| | || |  |||||| | |||||||| || || |||||||| ||||||||| |||||| || | | ||||    
T  22106151 atttcttccttccttagactcagtggcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgctt 22106250  T
Q  240 tgtttctttcattagaagtcggttctatcatttcatgg 277  Q
     ||| | |||  ||||||||||||| || | |||||||    
T  22106251 ggttccattccctagaagtcggttccattacttcatgg 22106288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 179 - 290
Target Start/End: Complemental strand, 6514 - 6403
Alignment:
Q  179 aaccaaaaggccgtaaggctacacctctttcctttttccttaggggataaagttagtgctttgtttctttcattagaagtcggttctatcatttcatggc 278  Q
    |||||| | |||||||| || || |||||||| ||||||||| |||||| || ||| |||| ||| | |||   |||||||||||| |||| |||||||     
T  6514 aaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctagcgcttggttccattcccaagaagtcggttccatcacttcatggg 6415  T
Q  279 aacaaatgaggc 290  Q
    | ||||||||||    
T  6414 atcaaatgaggc 6403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 165; Significance: 3e-88; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 1 - 297
Target Start/End: Complemental strand, 20600471 - 20600175
Alignment:
Q  1 cacatcttcagatgagtcatacgatggtattgtgtacataacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaat 100  Q
    |||||||||||||||| | ||||||| ||||||||||  |||||||||||||| ||| ||||||||||| ||||||||||||||| |||||||||| |||    
T  20600471 cacatcttcagatgagccgtacgatgctattgtgtacccaacggttgagggtagtaaatttgaaataaagcctgcacttatttacctagtgcagcaaaat 20600372  T
Q  101 caatttttcggatcacccactgagaattcgaattttcatatttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctac 200  Q
    |||||||||||||||||||||||| || ||||| ||||| |||||| |||| |||||||||||||||| ||||||||||||||| ||||||||||||| |    
T  20600371 caatttttcggatcacccactgaggatccgaatcttcatgtttcaaattttttaaaactcagtggaactttgaaggcaaaccaagaggccgtaaggctgc 20600272  T
Q  201 acctctttcctttttccttaggggataaagttagtgctttgtttctttcattagaagtcggttctatcatttcatggcaacaaatgaggcaagcttt 297  Q
    |||||||||||||||||||| |||||| || |||||||| ||||| ||||||   | | |||||||||| ||||||| | |||||||||| ||||||    
T  20600271 acctctttcctttttccttaagggatagagctagtgcttggtttcattcattgacaattggttctatcacttcatgggaccaaatgaggcgagcttt 20600175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 1 - 297
Target Start/End: Complemental strand, 20606768 - 20606472
Alignment:
Q  1 cacatcttcagatgagtcatacgatggtattgtgtacataacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaat 100  Q
    |||||||||||||||| | ||||||| ||||||||||  |||||||||||||| ||| ||||||||||| ||||||||||||||| |||||||||| |||    
T  20606768 cacatcttcagatgagccgtacgatgctattgtgtacccaacggttgagggtagtaaatttgaaataaagcctgcacttatttacctagtgcagcaaaat 20606669  T
Q  101 caatttttcggatcacccactgagaattcgaattttcatatttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctac 200  Q
    |||||||||||||||||||||||| || ||||| ||||| |||||| |||| |||||||||||||||| ||||||||||||||| ||||||||||||| |    
T  20606668 caatttttcggatcacccactgaggatccgaatcttcatgtttcaaattttttaaaactcagtggaactttgaaggcaaaccaagaggccgtaaggctgc 20606569  T
Q  201 acctctttcctttttccttaggggataaagttagtgctttgtttctttcattagaagtcggttctatcatttcatggcaacaaatgaggcaagcttt 297  Q
    |||||||||||||||||||| |||||| || |||||||| ||||| ||||||   | | |||||||||| ||||||| | |||||||||| ||||||    
T  20606568 acctctttcctttttccttaagggatagagctagtgcttggtttcattcattgacaattggttctatcacttcatgggaccaaatgaggcgagcttt 20606472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 1 - 297
Target Start/End: Complemental strand, 20613087 - 20612791
Alignment:
Q  1 cacatcttcagatgagtcatacgatggtattgtgtacataacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaat 100  Q
    |||||||||||||||| | ||||||| ||||||||||  |||||||||||||| ||| ||||||||||| ||||||||||||||| |||||||||| |||    
T  20613087 cacatcttcagatgagccgtacgatgctattgtgtacccaacggttgagggtagtaaatttgaaataaagcctgcacttatttacctagtgcagcaaaat 20612988  T
Q  101 caatttttcggatcacccactgagaattcgaattttcatatttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctac 200  Q
    |||||||||||||||||||||||| || ||||| ||||| |||||| |||| |||||||||||||||| ||||||||||||||| ||||||||||||| |    
T  20612987 caatttttcggatcacccactgaggatccgaatcttcatgtttcaaattttttaaaactcagtggaactttgaaggcaaaccaagaggccgtaaggctgc 20612888  T
Q  201 acctctttcctttttccttaggggataaagttagtgctttgtttctttcattagaagtcggttctatcatttcatggcaacaaatgaggcaagcttt 297  Q
    |||||||||||||||||||| |||||| || |||||||| ||||| ||||||   | | |||||||||| ||||||| | |||||||||| ||||||    
T  20612887 acctctttcctttttccttaagggatagagctagtgcttggtttcattcattgacaattggttctatcacttcatgggaccaaatgaggcgagcttt 20612791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 1 - 302
Target Start/End: Complemental strand, 20795386 - 20795085
Alignment:
Q  1 cacatcttcagatgagtcatacgatggtattgtgtacataacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaat 100  Q
    |||||||||||||||| | ||||||| ||||||||||  ||||||||||| || ||| ||||||||||| ||||||||||||||| |||||||||| |||    
T  20795386 cacatcttcagatgagccgtacgatgctattgtgtacccaacggttgaggatagtaaatttgaaataaagcctgcacttatttacctagtgcagcaaaat 20795287  T
Q  101 caatttttcggatcacccactgagaattcgaattttcatatttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctac 200  Q
    |||||||||||||||||||||||| || ||||| ||||| |||||| |||| |||||||||||||||| ||||||||||||||| ||||||||||||| |    
T  20795286 caatttttcggatcacccactgaggatccgaatcttcatgtttcaaattttttaaaactcagtggaactttgaaggcaaaccaagaggccgtaaggctgc 20795187  T
Q  201 acctctttcctttttccttaggggataaagttagtgctttgtttctttcattagaagtcggttctatcatttcatggcaacaaatgaggcaagcttttct 300  Q
    |||||||||||||||||||| |||||| || |||||||| ||||| ||||||     | |||||||||| ||||||| | |||||||||| |||||| ||    
T  20795186 acctctttcctttttccttaagggatagagctagtgcttggtttcattcattgactattggttctatcacttcatgggaccaaatgaggcgagctttcct 20795087  T
Q  301 tt 302  Q
    ||    
T  20795086 tt 20795085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 1 - 297
Target Start/End: Original strand, 18068464 - 18068760
Alignment:
Q  1 cacatcttcagatgagtcatacgatggtattgtgtacataacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaat 100  Q
    |||||||||||||||| | ||||||| ||||||||||  |||||||||||||| ||| ||||||||||| ||||||||||||||| |||||||||| |||    
T  18068464 cacatcttcagatgagccgtacgatgctattgtgtacccaacggttgagggtagtaaatttgaaataaagcctgcacttatttacctagtgcagcaaaat 18068563  T
Q  101 caatttttcggatcacccactgagaattcgaattttcatatttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctac 200  Q
    |||||||||||||||||||||||| || ||||| ||||| |||||| ||||  ||||||||||||||| ||||||||||||||| ||||||||||||| |    
T  18068564 caatttttcggatcacccactgaggatccgaatcttcatgtttcaattttttcaaaactcagtggaactttgaaggcaaaccaagaggccgtaaggctgc 18068663  T
Q  201 acctctttcctttttccttaggggataaagttagtgctttgtttctttcattagaagtcggttctatcatttcatggcaacaaatgaggcaagcttt 297  Q
    |||||||||||||||||||| |||||| || |||||||| ||||| ||||||     | |||||||||| ||||||| | |||||||||| ||||||    
T  18068664 acctctttcctttttccttaagggatagagctagtgcttggtttcattcattgcctattggttctatcacttcatgggaccaaatgaggcgagcttt 18068760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 1 - 297
Target Start/End: Complemental strand, 21284880 - 21284584
Alignment:
Q  1 cacatcttcagatgagtcatacgatggtattgtgtacataacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaat 100  Q
    |||||||||||||||| ||||||||| ||||||||||  |||||||||||||| ||| || |||||||| ||||||||||||||| | |||||||| |||    
T  21284880 cacatcttcagatgagccatacgatgctattgtgtacccaacggttgagggtattaaattagaaataaagcctgcacttatttacctggtgcagcaaaat 21284781  T
Q  101 caatttttcggatcacccactgagaattcgaattttcatatttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctac 200  Q
    |||||||||||||||||||||||| || ||||||||||| |||||| |||| ||| |||||||||||| ||||||||||||||| ||||||||||||| |    
T  21284780 caatttttcggatcacccactgaggatccgaattttcatttttcaatttttttaagactcagtggaactttgaaggcaaaccaagaggccgtaaggctgc 21284681  T
Q  201 acctctttcctttttccttaggggataaagttagtgctttgtttctttcattagaagtcggttctatcatttcatggcaacaaatgaggcaagcttt 297  Q
    |||||||||||||||||||| |||||| || |||||||| ||||| ||||||     | |||||||||| ||||||| | |||||||||| ||||||    
T  21284680 acctctttcctttttccttaagggatagagctagtgcttggtttcattcattgactattggttctatcacttcatgggaccaaatgaggcgagcttt 21284584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 1 - 297
Target Start/End: Original strand, 24216011 - 24216307
Alignment:
Q  1 cacatcttcagatgagtcatacgatggtattgtgtacataacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaat 100  Q
    |||||||||| | ||||||||||||| ||||||||||  |||||||||||||| ||| ||||||||||| ||||||||||||||  |||||||||| |||    
T  24216011 cacatcttcaaacgagtcatacgatgctattgtgtacccaacggttgagggtattaaatttgaaataaagcctgcacttatttatctagtgcagcaaaat 24216110  T
Q  101 caatttttcggatcacccactgagaattcgaattttcatatttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctac 200  Q
    |||||||||||||||||||||||| || ||||| ||||| |||||| |||| ||| |||||||||||| ||||||||||||||| ||||||||||||| |    
T  24216111 caatttttcggatcacccactgaggatccgaatcttcatgtttcaatttttttaagactcagtggaactttgaaggcaaaccaagaggccgtaaggctgc 24216210  T
Q  201 acctctttcctttttccttaggggataaagttagtgctttgtttctttcattagaagtcggttctatcatttcatggcaacaaatgaggcaagcttt 297  Q
    |||||||||||||||||||| |||||| || |||||||| ||||| ||||||   | | |||||||||| ||||||| | |||||||||| ||||||    
T  24216211 acctctttcctttttccttaagggatatagctagtgcttggtttcattcattgacaattggttctatcacttcatgggaccaaatgaggcgagcttt 24216307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 28 - 292
Target Start/End: Original strand, 22943461 - 22943725
Alignment:
Q  28 tattgtgtacataacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaatcaatttttcggatcacccactgagaat 127  Q
    ||||||||||  |||||||||||||||||||||| ||||||| ||||||||||||||||||| |||||| |||||||||| |||||||||||| ||| ||    
T  22943461 tattgtgtacccaacggttgagggtaataattttaaaataaaacctgcacttatttacttagcgcagcaaaatcaattttccggatcacccaccgaggat 22943560  T
Q  128 tcgaattttcatatttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctacacctctttcctttttccttaggggata 227  Q
     ||||| ||||||||||||  ||| ||| |||||||||||||||||| ||||||||| ||||||||||||| ||||||||||||||||||||| ||||||    
T  22943561 ccgaatcttcatatttcaaaatttttaagactcagtggaaccttgaatgcaaaccaagaggccgtaaggctgcacctctttcctttttccttaagggata 22943660  T
Q  228 aagttagtgctttgtttctttcattagaagtcggttctatcatttcatggcaacaaatgaggcaa 292  Q
     || |||||||| ||||| |||||| ||||| |||||||||| ||||||| | ||||||||||||    
T  22943661 gagctagtgcttggtttcattcattggaagttggttctatcacttcatgggaccaaatgaggcaa 22943725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 1 - 289
Target Start/End: Complemental strand, 23604772 - 23604484
Alignment:
Q  1 cacatcttcagatgagtcatacgatggtattgtgtacataacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaat 100  Q
    ||||| |||||||||| |  || ||||||||||||||  ||||||| |||||| ||| ||||||||||| ||||||||||||||| |||||||||| |||    
T  23604772 cacattttcagatgagccgcacaatggtattgtgtacccaacggttaagggtattaaatttgaaataaagcctgcacttatttacctagtgcagcaaaat 23604673  T
Q  101 caatttttcggatcacccactgagaattcgaattttcatatttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctac 200  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||| |    
T  23604672 caatttttcggatcacccactgaggatccgaattttcatatttcaacttttctaagactcagtggaactttgaaggcaaaccaagaggccgtaaggctgc 23604573  T
Q  201 acctctttcctttttccttaggggataaagttagtgctttgtttctttcattagaagtcggttctatcatttcatggcaacaaatgagg 289  Q
    ||||||||||||| || ||  |||||| || |||||||| ||||| ||||||  || | |||||||| ||||||||| | |||||||||    
T  23604572 acctctttcctttctctttgagggatagagctagtgcttggtttcattcattgaaaattggttctataatttcatgggaccaaatgagg 23604484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 1 - 302
Target Start/End: Complemental strand, 23714642 - 23714341
Alignment:
Q  1 cacatcttcagatgagtcatacgatggtattgtgtacataacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaat 100  Q
    ||||| |||||||||| |  || ||| ||||||||||  |||||||||||||| ||| ||||||||||| ||||||||||||||| |||||||||| |||    
T  23714642 cacattttcagatgagccgcacaatgctattgtgtacccaacggttgagggtattaaatttgaaataaagcctgcacttatttacctagtgcagcaaaat 23714543  T
Q  101 caatttttcggatcacccactgagaattcgaattttcatatttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctac 200  Q
    |||||||||||||||||||||||| || ||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||| |    
T  23714542 caatttttcggatcacccactgaggatccgaattttcatgtttcaacttttctaagactcagtggaactttgaaggcaaaccaagaggccgtaaggctgc 23714443  T
Q  201 acctctttcctttttccttaggggataaagttagtgctttgtttctttcattagaagtcggttctatcatttcatggcaacaaatgaggcaagcttttct 300  Q
    ||||||||||||| || ||  |||||| || |||||||| ||||| ||||||  || | |||||||| ||||||||| | ||||||||| | || |||||    
T  23714442 acctctttcctttctctttgagggatagagctagtgcttggtttcattcattgaaaattggttctataatttcatgggaccaaatgaggaaggcatttct 23714343  T
Q  301 tt 302  Q
    ||    
T  23714342 tt 23714341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 1 - 302
Target Start/End: Original strand, 24936805 - 24937106
Alignment:
Q  1 cacatcttcagatgagtcatacgatggtattgtgtacataacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaat 100  Q
    |||||||||||||||| | ||||||| ||||||||||  ||||||||||| || ||| ||||||||||| ||||||||||||||| | |||||||| |||    
T  24936805 cacatcttcagatgagccgtacgatgctattgtgtacccaacggttgaggatattaaatttgaaataaagcctgcacttatttacctggtgcagcaaaat 24936904  T
Q  101 caatttttcggatcacccactgagaattcgaattttcatatttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctac 200  Q
    |||||||||||||||||||||||| || ||||||||||| ||||||||||| ||| |||||||||||| ||||||||||||||| ||||||||||||| |    
T  24936905 caatttttcggatcacccactgaggatccgaattttcatgtttcaacttttttaagactcagtggaactttgaaggcaaaccaagaggccgtaaggctgc 24937004  T
Q  201 acctctttcctttttccttaggggataaagttagtgctttgtttctttcattagaagtcggttctatcatttcatggcaacaaatgaggcaagcttttct 300  Q
    ||||||||||||| || ||  |||||| || |||||||| ||||| ||||||  || | |||||||||| ||||||| | ||||||||| | || |||||    
T  24937005 acctctttcctttctctttgagggatagagctagtgcttggtttcattcattgcaaattggttctatcacttcatggaaccaaatgaggaaggcatttct 24937104  T
Q  301 tt 302  Q
    ||    
T  24937105 tt 24937106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 28 - 292
Target Start/End: Original strand, 21383352 - 21383616
Alignment:
Q  28 tattgtgtacataacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaatcaatttttcggatcacccactgagaat 127  Q
    ||||||||||  |||||||||||| || |||||||| || || ||| ||||  || |||| |||||||| ||||||||||  ||||| ||| ||||| ||    
T  21383352 tattgtgtacccaacggttgagggaaacaattttgagatcaagcctacactacttaacttggtgcagcaaaatcaattttctggatcgcccgctgaggat 21383451  T
Q  128 tcgaattttcatatttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctacacctctttcctttttccttaggggata 227  Q
     | ||| | ||||| ||||||||  ||| |||||| ||||| ||||| || || ||| | ||||||||||| |||||||||||||| |||||| ||||||    
T  21383452 ccaaatctgcatatctcaactttcttaagactcagcggaactttgaaagcgaatcaagaagccgtaaggctgcacctctttcctttctccttaagggata 21383551  T
Q  228 aagttagtgctttgtttctttcattagaagtcggttctatcatttcatggcaacaaatgaggcaa 292  Q
     || |||||||| ||||| |||||||||||| ||||| || | ||||||| | ||||||||||||    
T  21383552 gagctagtgcttggtttcattcattagaagttggttccatgacttcatgggatcaaatgaggcaa 21383616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 143 - 302
Target Start/End: Complemental strand, 20448654 - 20448495
Alignment:
Q  143 tcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctacacctctttcctttttccttaggggataaagttagtgctttgt 242  Q
    |||| |||| ||| |||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||| || ||  |||||| || |||||||| ||    
T  20448654 tcaatttttttaagactcagtggaactttgaaggcaaaccaagaggccgtaaggctgcacctctttcctttctctttgagggatagagctagtgcttggt 20448555  T
Q  243 ttctttcattagaagtcggttctatcatttcatggcaacaaatgaggcaagcttttcttt 302  Q
    ||| ||||||  || | |||||||||| ||||||| | ||||||||| | || |||||||    
T  20448554 ttcattcattgcaaattggttctatcacttcatggaaccaaatgaggaaggcatttcttt 20448495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 20448753 - 20448646
Alignment:
Q  1 cacatcttcagatgagtcatacgatggtattgtgtacataacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaat 100  Q
    |||||||||||||||| | ||||||| |||||||||   |||||||||||||| ||| ||||||||||| ||||||||||||||| | |||||||| |||    
T  20448753 cacatcttcagatgagccgtacgatgctattgtgtatccaacggttgagggtagtaaatttgaaataaagcctgcacttatttaccttgtgcagcaaaat 20448654  T
Q  101 caattttt 108  Q
    ||||||||    
T  20448653 caattttt 20448646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 40 - 290
Target Start/End: Complemental strand, 25121323 - 25121073
Alignment:
Q  40 aacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaatcaatttttcggatcacccactgagaattcgaattttcat 139  Q
    ||||||||||||||| || || ||||| || ||||||||  |  | || |||||||| ||||| ||||  ||||||||||||||| || | ||| | |||    
T  25121323 aacggttgagggtaacaacttcgaaatcaagcctgcactactcaatttggtgcagcaaaatcagttttctggatcacccactgaggatccaaatctccat 25121224  T
Q  140 atttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctacacctctttcctttttccttaggggataaagttagtgctt 239  Q
    |||||  | || || | ||||||||| ||  | || |  |||||| | |||||||| |  || |||||||| ||||||||| |||||| || ||| ||||    
T  25121223 atttcttccttccttagactcagtggcactataaaagagaaccaagaagccgtaagacgtcatctctttcccttttccttaagggatagagctagcgctt 25121124  T
Q  240 tgtttctttcattagaagtcggttctatcatttcatggcaacaaatgaggc 290  Q
     ||| | |||  ||||||||||||| |||| ||||||| | ||||||||||    
T  25121123 ggttccattccctagaagtcggttccatcacttcatgggatcaaatgaggc 25121073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 40 - 290
Target Start/End: Complemental strand, 25180414 - 25180164
Alignment:
Q  40 aacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaatcaatttttcggatcacccactgagaattcgaattttcat 139  Q
    ||||||||||||||| || || ||||| || ||||||||  |  | || |||||||| ||||| ||||  ||||||||||||||| || | ||| | |||    
T  25180414 aacggttgagggtaacaacttcgaaatcaagcctgcactactcaatttggtgcagcaaaatcagttttctggatcacccactgaggatccaaatctccat 25180315  T
Q  140 atttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctacacctctttcctttttccttaggggataaagttagtgctt 239  Q
    |||||  | || || | ||||||||| ||  | || |  |||||| | |||||||| |  || |||||||| ||||||||| |||||| || ||| ||||    
T  25180314 atttcttccttccttagactcagtggcactataaaagagaaccaagaagccgtaagacgtcatctctttcccttttccttaagggatagagctagcgctt 25180215  T
Q  240 tgtttctttcattagaagtcggttctatcatttcatggcaacaaatgaggc 290  Q
     ||| | |||  ||||||||||||| |||| ||||||| | ||||||||||    
T  25180214 ggttccattccctagaagtcggttccatcacttcatgggatcaaatgaggc 25180164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 277
Target Start/End: Complemental strand, 30768255 - 30768018
Alignment:
Q  40 aacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaatcaatttttcggatcacccactgagaattcgaattttcat 139  Q
    |||||||||||||||||| || || || || ||||||||  |  | || |||||||| ||||| ||||  |||||||||| |||| || | ||| | |||    
T  30768255 aacggttgagggtaataacttcgagatcaagcctgcactactcaatttggtgcagcaaaatcagttttctggatcacccaatgaggatccaaatctccat 30768156  T
Q  140 atttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctacacctctttcctttttccttaggggataaagttagtgctt 239  Q
    |||||  | || || | ||||||||| ||| | || |  |||||| | |||||||| || || |||||||| ||||||||| |||||| || ||| ||||    
T  30768155 atttcttcattccttagactcagtggcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctagcgctt 30768056  T
Q  240 tgtttctttcattagaagtcggttctatcatttcatgg 277  Q
     ||| | |||  ||||||||||||| |||| |||||||    
T  30768055 ggttccattccctagaagtcggttccatcacttcatgg 30768018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 290
Target Start/End: Complemental strand, 22322584 - 22322334
Alignment:
Q  40 aacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaatcaatttttcggatcacccactgagaattcgaattttcat 139  Q
    ||||||||||||||| || || || || || ||||||||  |  | || |||||||| ||||| ||||  ||||||||||||||| || | ||| | |||    
T  22322584 aacggttgagggtaacaacttcgagatcaagcctgcactactcaatttggtgcagcaaaatcagttttctggatcacccactgaggatccaaatctccat 22322485  T
Q  140 atttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctacacctctttcctttttccttaggggataaagttagtgctt 239  Q
    |||||  | || || | ||||||||| ||  | || |  |||||| | ||| |||| || || |||||||| ||||||||| |||||| || ||| ||||    
T  22322484 atttcttccttccttagactcagtggcactataaaagagaaccaagaagccataagacttcatctctttcccttttccttaagggatagagctagcgctt 22322385  T
Q  240 tgtttctttcattagaagtcggttctatcatttcatggcaacaaatgaggc 290  Q
     ||| | |||  ||||||||||||| |||| ||||||| | ||||||||||    
T  22322384 ggttccattccctagaagtcggttccatcacttcatgggatcaaatgaggc 22322334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 277
Target Start/End: Complemental strand, 16103218 - 16102981
Alignment:
Q  40 aacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaatcaatttttcggatcacccactgagaattcgaattttcat 139  Q
    |||||||  ||||||||| || ||||| || ||||||||  |  | ||||||||||| || || ||||  ||||||||||||||| || | ||| | |||    
T  16103218 aacggttacgggtaataacttcgaaatcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccat 16103119  T
Q  140 atttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctacacctctttcctttttccttaggggataaagttagtgctt 239  Q
    |||||  | || || | ||||||||| ||| | || |  |||||| | |||||||| || || |||||||| ||||||||| |||||| || ||| ||||    
T  16103118 atttcttccttccttagactcagtggcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctagcgctt 16103019  T
Q  240 tgtttctttcattagaagtcggttctatcatttcatgg 277  Q
     ||| | |||  ||||||||||||| || | |||||||    
T  16103018 ggttccattccctagaagtcggttccattacttcatgg 16102981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 277
Target Start/End: Complemental strand, 20443328 - 20443091
Alignment:
Q  40 aacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaatcaatttttcggatcacccactgagaattcgaattttcat 139  Q
    ||||||| ||||||| || || ||||| || ||||||||  |  | || |||||||| ||||| ||||  ||||||||||||||| || | ||| | |||    
T  20443328 aacggttcagggtaacaacttcgaaatcaagcctgcactactcaatttggtgcagcaaaatcagttttctggatcacccactgaggatccaaatctccat 20443229  T
Q  140 atttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctacacctctttcctttttccttaggggataaagttagtgctt 239  Q
    |||||  | || || | ||||| ||| ||| | || |  |||||| | |||||||| || || |||||||| ||||||||| |||||| || ||| ||||    
T  20443228 atttcttccttccttagactcaatggcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctagcgctt 20443129  T
Q  240 tgtttctttcattagaagtcggttctatcatttcatgg 277  Q
     ||| | |||  ||||||||||||| |||| |||||||    
T  20443128 ggttccattccctagaagtcggttccatcacttcatgg 20443091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 277
Target Start/End: Complemental strand, 24968325 - 24968088
Alignment:
Q  40 aacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaatcaatttttcggatcacccactgagaattcgaattttcat 139  Q
    |||||||| ||||||||| || ||||| || ||||||||  |  | ||||||||||| || || ||||  ||||||||||||||| || | ||| | |||    
T  24968325 aacggttgcgggtaataacttcgaaatcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccat 24968226  T
Q  140 atttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctacacctctttcctttttccttaggggataaagttagtgctt 239  Q
    |||||  | || || | ||||||||| ||| | || |  |||||| | |||||||| || || |||||||| ||||||||| |||||| || | | ||||    
T  24968225 atttcttccttccttagactcagtggcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgctt 24968126  T
Q  240 tgtttctttcattagaagtcggttctatcatttcatgg 277  Q
     ||| | |||  ||||||||||||| || | |||||||    
T  24968125 ggttccattccctagaagtcggttccattacttcatgg 24968088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 290
Target Start/End: Complemental strand, 26774263 - 26774176
Alignment:
Q  203 ctctttcctttttccttaggggataaagttagtgctttgtttctttcattagaagtcggttctatcatttcatggcaacaaatgaggc 290  Q
    |||||||| ||||||||| |||||| || ||| |||| ||| | |||  ||||||||||||| |||| ||||||| | ||||||||||    
T  26774263 ctctttcccttttccttaagggatagagctagcgcttggttccattccctagaagtcggttccatcacttcatgggatcaaatgaggc 26774176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 161; Significance: 7e-86; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 1 - 297
Target Start/End: Original strand, 118945 - 119241
Alignment:
Q  1 cacatcttcagatgagtcatacgatggtattgtgtacataacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaat 100  Q
    |||||||||||||||| | ||||||| ||||||||||  |||||||||||||| ||| ||||||||||| ||||||||||||||| |||||||||| |||    
T  118945 cacatcttcagatgagccgtacgatgctattgtgtacccaacggttgagggtagtaaatttgaaataaagcctgcacttatttacctagtgcagcaaaat 119044  T
Q  101 caatttttcggatcacccactgagaattcgaattttcatatttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctac 200  Q
    |||||||||||||||||||||||| || ||||| ||||| |||||| |||| |||||||||||||||| ||||||||||||||| ||||||||||||| |    
T  119045 caatttttcggatcacccactgaggatccgaatcttcatgtttcaaattttttaaaactcagtggaactttgaaggcaaaccaagaggccgtaaggctgc 119144  T
Q  201 acctctttcctttttccttaggggataaagttagtgctttgtttctttcattagaagtcggttctatcatttcatggcaacaaatgaggcaagcttt 297  Q
    |||||||||||||||||||| |||||| || |||||||| ||||| ||||||     | |||||||||| ||||||| | |||||||||| ||||||    
T  119145 acctctttcctttttccttaagggatagagctagtgcttggtttcattcattgactattggttctatcacttcatgggaccaaatgaggcgagcttt 119241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 161; Significance: 7e-86; HSPs: 11)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 1 - 289
Target Start/End: Original strand, 27042979 - 27043267
Alignment:
Q  1 cacatcttcagatgagtcatacgatggtattgtgtacataacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaat 100  Q
    |||||||||||||||| | ||||||| ||||||||||  ||||||||||| || ||| ||||||||||| ||||||||||||||| | |||||||| |||    
T  27042979 cacatcttcagatgagccgtacgatgctattgtgtacccaacggttgaggatattaaatttgaaataaagcctgcacttatttacctggtgcagcaaaat 27043078  T
Q  101 caatttttcggatcacccactgagaattcgaattttcatatttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctac 200  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||| |    
T  27043079 caatttttcggatcacccactgaggatccgaattttcatatttcaacttttctaagactcagtggaactttgaaggcaaaccaagaggccgtaaggctgc 27043178  T
Q  201 acctctttcctttttccttaggggataaagttagtgctttgtttctttcattagaagtcggttctatcatttcatggcaacaaatgagg 289  Q
    ||||||||||||| || ||  |||||| || |||||||| ||||||||||||  || | |||||||| ||||||||| | |||||||||    
T  27043179 acctctttcctttctctttgagggatagagctagtgcttggtttctttcattgaaaattggttctataatttcatgggaccaaatgagg 27043267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 59 - 297
Target Start/End: Original strand, 20071571 - 20071809
Alignment:
Q  59 tttgaaataaatcctgcacttatttacttagtgcagcagaatcaatttttcggatcacccactgagaattcgaattttcatatttcaacttttctaaaac 158  Q
    ||||||||||| ||||||||||||||| |||||||||| ||||||||||||||||||||||||||| || ||||| ||||| |||||| |||| ||||||    
T  20071571 tttgaaataaagcctgcacttatttacctagtgcagcaaaatcaatttttcggatcacccactgaggatccgaatcttcatgtttcaaattttttaaaac 20071670  T
Q  159 tcagtggaaccttgaaggcaaaccaaaaggccgtaaggctacacctctttcctttttccttaggggataaagttagtgctttgtttctttcattagaagt 258  Q
    |||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||| || |||||||| ||||| ||||||     |    
T  20071671 tcagtggaactttgaaggcaaaccaagaggccgtaaggctgcacctctttcctttttccttaagggatagagctagtgcttggtttcattcattgactat 20071770  T
Q  259 cggttctatcatttcatggcaacaaatgaggcaagcttt 297  Q
     |||||||||| ||||||| | |||||||||| ||||||    
T  20071771 tggttctatcacttcatgggaccaaatgaggcgagcttt 20071809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 1 - 289
Target Start/End: Complemental strand, 21783090 - 21782802
Alignment:
Q  1 cacatcttcagatgagtcatacgatggtattgtgtacataacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaat 100  Q
    |||||||||||||||| | || |||| ||||||||||  |||||||||| ||| |||  |||||||||| ||||||||||||||| |||||||||| |||    
T  21783090 cacatcttcagatgagccgtatgatgctattgtgtacccaacggttgagagtattaaagttgaaataaaacctgcacttatttacctagtgcagcaaaat 21782991  T
Q  101 caatttttcggatcacccactgagaattcgaattttcatatttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctac 200  Q
    |||||||||||||||||||||||| || ||||| ||||| ||| || |||| ||| |||| ||||||| ||||||||||||||| ||||||||||||| |    
T  21782990 caatttttcggatcacccactgaggatccgaatcttcatgttttaatttttttaagactcggtggaactttgaaggcaaaccaagaggccgtaaggctgc 21782891  T
Q  201 acctctttcctttttccttaggggataaagttagtgctttgtttctttcattagaagtcggttctatcatttcatggcaacaaatgagg 289  Q
    ||||||||||||| || ||  ||| || || |||||||| ||||| ||||||| || | |||||||||| ||||||| | |||||||||    
T  21782890 acctctttcctttctctttgagggttagagctagtgcttggtttcattcattacaaattggttctatcacttcatgggaccaaatgagg 21782802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 28 - 294
Target Start/End: Complemental strand, 19879093 - 19878827
Alignment:
Q  28 tattgtgtacataacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaatcaatttttcggatcacccactgagaat 127  Q
    ||||||||||   |||||| ||||||| || ||||| || || ||||||||  || | || |||||||| ||||| ||||  ||||| ||| ||||| ||    
T  19879093 tattgtgtaccctacggttaagggtaacaactttgagatcaagcctgcactacttaatttggtgcagcaaaatcagttttctggatcgcccgctgaggat 19878994  T
Q  128 tcgaattttcatatttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctacacctctttcctttttccttaggggata 227  Q
     | ||| | ||||| |||| |||||||| | |||||| ||||||||| |  || ||| | || |||||||| |||||||||||||| |||||| ||||||    
T  19878993 ccaaatctacatatctcaatttttctaagaatcagtgaaaccttgaaagagaatcaagaagctgtaaggctgcacctctttcctttctccttaagggata 19878894  T
Q  228 aagttagtgctttgtttctttcattagaagtcggttctatcatttcatggcaacaaatgaggcaagc 294  Q
     || |||||||| ||| | |||||| ||||| ||||| || | ||||||| | ||||||||||||||    
T  19878893 gagctagtgcttggttccattcattggaagttggttccattacttcatgggatcaaatgaggcaagc 19878827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 176 - 292
Target Start/End: Complemental strand, 16399883 - 16399767
Alignment:
Q  176 gcaaaccaaaaggccgtaaggctacacctctttcctttttccttaggggataaagttagtgctttgtttctttcattagaagtcggttctatcatttcat 275  Q
    ||||||||| ||| ||||||  |  |||||||||||||||||||| |||||| || |||||| |  |||| |||||||||||| |||||||||| |||||    
T  16399883 gcaaaccaagaggacgtaagattgtacctctttcctttttccttaagggatagagctagtgcatgttttcattcattagaagttggttctatcacttcat 16399784  T
Q  276 ggcaacaaatgaggcaa 292  Q
    || | ||||||||||||    
T  16399783 gggaccaaatgaggcaa 16399767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 40 - 277
Target Start/End: Complemental strand, 23500776 - 23500539
Alignment:
Q  40 aacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaatcaatttttcggatcacccactgagaattcgaattttcat 139  Q
    |||||||||||||||||| || ||||| || ||||||||  || | || |||||||| ||||| ||||  ||||||||||||||| || | ||| | |||    
T  23500776 aacggttgagggtaataacttcgaaatcaagcctgcactacttaatttggtgcagcaaaatcagttttctggatcacccactgaggatccaaatctccat 23500677  T
Q  140 atttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctacacctctttcctttttccttaggggataaagttagtgctt 239  Q
    |||||  | || || | ||||||||| ||| | || |  |||||| | ||||| || || || |||||||| ||||||||| |||||| || ||| ||||    
T  23500676 atttcttccttccttagactcagtggcaccataaaagagaaccaagaagccgttagacttcatctctttcccttttccttaagggatagagctagcgctt 23500577  T
Q  240 tgtttctttcattagaagtcggttctatcatttcatgg 277  Q
     ||| | |||  ||||||||||||| |||| |||||||    
T  23500576 ggttccattccctagaagtcggttccatcacttcatgg 23500539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 277
Target Start/End: Original strand, 20232610 - 20232847
Alignment:
Q  40 aacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaatcaatttttcggatcacccactgagaattcgaattttcat 139  Q
    |||||||||||||||||| || || || || ||||||||  |  | || |||||||| ||||| ||||  ||||||||||||||| || | ||| | |||    
T  20232610 aacggttgagggtaataacttcgagatcaagcctgcactactcaatttggtgcagcaaaatcagttttctggatcacccactgaggatccaaatctccat 20232709  T
Q  140 atttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctacacctctttcctttttccttaggggataaagttagtgctt 239  Q
    |||||  | || || | ||||||||| ||| | || |  |||||| | |||||||| || || |||||||| || |||||| |||||| || ||| ||||    
T  20232710 atttcttccttacttagactcagtggcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttctccttaagggatagagctagcgctt 20232809  T
Q  240 tgtttctttcattagaagtcggttctatcatttcatgg 277  Q
     ||| | |||  ||||||||||||| |||| |||||||    
T  20232810 ggttccattccctagaagtcggttccatcacttcatgg 20232847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 179 - 290
Target Start/End: Complemental strand, 52952797 - 52952686
Alignment:
Q  179 aaccaaaaggccgtaaggctacacctctttcctttttccttaggggataaagttagtgctttgtttctttcattagaagtcggttctatcatttcatggc 278  Q
    |||||| | |||||||| || || |||||||||||||||||| |||||| || ||| ||||  || | |||  ||||||||||||| |||| |||||||     
T  52952797 aaccaagaagccgtaagacttcatctctttcctttttccttaagggatagagctagcgcttgattccattccctagaagtcggttccatcacttcatggg 52952698  T
Q  279 aacaaatgaggc 290  Q
    | ||||||||||    
T  52952697 atcaaatgaggc 52952686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 192 - 289
Target Start/End: Complemental strand, 21790533 - 21790436
Alignment:
Q  192 taaggctacacctctttcctttttccttaggggataaagttagtgctttgtttctttcattagaagtcggttctatcatttcatggcaacaaatgagg 289  Q
    ||||||| |||||||||||||| || ||  |||||| || |||||||| ||||| ||||||  || | |||||||||| ||||||| | |||||||||    
T  21790533 taaggctgcacctctttcctttctctttgagggatagagctagtgcttggtttcattcattgcaaattggttctatcacttcatgggaccaaatgagg 21790436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 277
Target Start/End: Original strand, 22842813 - 22843050
Alignment:
Q  40 aacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaatcaatttttcggatcacccactgagaattcgaattttcat 139  Q
    |||||||| ||||||||| || ||||| || ||||||||  |  | ||||||||||| || || ||||  ||||||||||||||| || | ||| | |||    
T  22842813 aacggttgcgggtaataacttcgaaatcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccat 22842912  T
Q  140 atttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctacacctctttcctttttccttaggggataaagttagtgctt 239  Q
    |||||  | || || | ||||||||| ||| | || |  |||||| | |||||||| || || |||||||| ||||||||| |||||| || | | ||||    
T  22842913 atttcttccttccttagactcagtggcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctggcgctt 22843012  T
Q  240 tgtttctttcattagaagtcggttctatcatttcatgg 277  Q
     ||| | |||  ||||||||||||| || | |||||||    
T  22843013 ggttccattccctagaagtcggttccattacttcatgg 22843050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 277
Target Start/End: Complemental strand, 21803828 - 21803591
Alignment:
Q  40 aacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaatcaatttttcggatcacccactgagaattcgaattttcat 139  Q
    |||||||| ||||||||| || || || || ||||||||  |  | ||||||||||| ||  | ||||  ||||||||||||||| || | ||| | |||    
T  21803828 aacggttgcgggtaataacttcgagatcaagcctgcactactcaatttagtgcagcaaaactagttttctggatcacccactgaggatccaaatctccat 21803729  T
Q  140 atttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctacacctctttcctttttccttaggggataaagttagtgctt 239  Q
    |||||  | || || | ||||||||| ||| | || |  |||||| | |||||||| || || |||||||| ||||||||| |||||| || ||| ||||    
T  21803728 atttcttccttccttagactcagtggcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctagcgctt 21803629  T
Q  240 tgtttctttcattagaagtcggttctatcatttcatgg 277  Q
     ||| | |||  ||||||||||||| || | |||||||    
T  21803628 ggttccattccctagaagtcggttccattacttcatgg 21803591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 157; Significance: 2e-83; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 1 - 297
Target Start/End: Complemental strand, 10607177 - 10606881
Alignment:
Q  1 cacatcttcagatgagtcatacgatggtattgtgtacataacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaat 100  Q
    |||||||||||||||| | ||||||| ||||||||||  |||||||||||||| ||| ||||||||||| ||||||||||||||| |||||||||| |||    
T  10607177 cacatcttcagatgagccgtacgatgctattgtgtacccaacggttgagggtagtaaatttgaaataaagcctgcacttatttacctagtgcagcaaaat 10607078  T
Q  101 caatttttcggatcacccactgagaattcgaattttcatatttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctac 200  Q
    |||||||||||||||||||||||| || ||||| ||||| |||||| |||| |||||||||||||||| ||||||||||||||| ||||||||||||| |    
T  10607077 caatttttcggatcacccactgaggatccgaatcttcatgtttcaaattttttaaaactcagtggaactttgaaggcaaaccaagaggccgtaaggctgc 10606978  T
Q  201 acctctttcctttttccttaggggataaagttagtgctttgtttctttcattagaagtcggttctatcatttcatggcaacaaatgaggcaagcttt 297  Q
    |||||||||||||||||||| |||||| |  |||||||| ||||| ||||||     | |||||||||| ||||||| | |||||||||| ||||||    
T  10606977 acctctttcctttttccttaagggatagaactagtgcttggtttcattcattgactattggttctatcacttcatgggaccaaatgaggcgagcttt 10606881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 2 - 297
Target Start/End: Complemental strand, 22168953 - 22168658
Alignment:
Q  2 acatcttcagatgagtcatacgatggtattgtgtacataacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaatc 101  Q
    ||||||||||||||| | ||||||| ||||||||||  |||||||||||||| ||| ||||||||||| ||||||||||||||| |||||||||| ||||    
T  22168953 acatcttcagatgagccgtacgatgctattgtgtacccaacggttgagggtagtaaatttgaaataaagcctgcacttatttacctagtgcagcaaaatc 22168854  T
Q  102 aatttttcggatcacccactgagaattcgaattttcatatttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctaca 201  Q
    ||||||||||||||||||||||| || ||||| ||||| ||||||  ||| |||||||||||||||| ||||||||||||||| ||||||||||||| ||    
T  22168853 aatttttcggatcacccactgaggatccgaatcttcatgtttcaaaatttttaaaactcagtggaactttgaaggcaaaccaagaggccgtaaggctgca 22168754  T
Q  202 cctctttcctttttccttaggggataaagttagtgctttgtttctttcattagaagtcggttctatcatttcatggcaacaaatgaggcaagcttt 297  Q
    ||||||||||||||||||| |||||| || |||||||| ||||| ||||||     | |||||||||| ||||||| | |||||||||| ||||||    
T  22168753 cctctttcctttttccttaagggatagagctagtgcttggtttcattcattgactattggttctatcacttcatgggaccaaatgaggcgagcttt 22168658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 1 - 289
Target Start/End: Original strand, 20151691 - 20151979
Alignment:
Q  1 cacatcttcagatgagtcatacgatggtattgtgtacataacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaat 100  Q
    |||||||||||||||| | ||| ||| |||| |||||  |||||||||||||| ||| |||||||||||  |||||||||||| | |||||||||| |||    
T  20151691 cacatcttcagatgagccgtacaatgttattatgtacccaacggttgagggtactaaatttgaaataaagtctgcacttatttgcctagtgcagcaaaat 20151790  T
Q  101 caatttttcggatcacccactgagaattcgaattttcatatttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctac 200  Q
    |||||||| ||||||||||||||| || ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||| |    
T  20151791 caattttttggatcacccactgaggatccgaattttcatatttcaacttttctaagactcagtggaaccttgaaggcaaaccaagaggccgtaaggctgc 20151890  T
Q  201 acctctttcctttttccttaggggataaagttagtgctttgtttctttcattagaagtcggttctatcatttcatggcaacaaatgagg 289  Q
    ||||||||||||| |||||| |||||| || |||||||| ||||| ||||||  || | |||| ||||| ||||||| | |||||||||    
T  20151891 acctctttcctttctccttaagggatagagctagtgcttggtttcattcattgcaaattggttatatcacttcatgggaccaaatgagg 20151979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 1 - 289
Target Start/End: Original strand, 20557289 - 20557577
Alignment:
Q  1 cacatcttcagatgagtcatacgatggtattgtgtacataacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaat 100  Q
    |||||||||||||||| | ||||||| ||||||||||  ||||||| |||||| ||| ||||||||||| ||||||||||||||| |||||||||| |||    
T  20557289 cacatcttcagatgagccgtacgatgctattgtgtacccaacggttaagggtattaaatttgaaataaagcctgcacttatttacctagtgcagcaaaat 20557388  T
Q  101 caatttttcggatcacccactgagaattcgaattttcatatttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctac 200  Q
    |||||||||||||||||||||||| || ||||| ||||| |||||| |||| ||| |||||||||||| ||||||||||||||| ||||||||||||| |    
T  20557389 caatttttcggatcacccactgaggatccgaatcttcatgtttcaatttttttaagactcagtggaactttgaaggcaaaccaagaggccgtaaggctgc 20557488  T
Q  201 acctctttcctttttccttaggggataaagttagtgctttgtttctttcattagaagtcggttctatcatttcatggcaacaaatgagg 289  Q
    ||||||||||||| || ||  |||||| || |||||||| ||||| ||||||  || | |||||||| ||||||||| | |||||||||    
T  20557489 acctctttcctttctctttgagggatagagctagtgcttggtttcattcattgaaaattggttctataatttcatgggaccaaatgagg 20557577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 1 - 289
Target Start/End: Original strand, 6810979 - 6811267
Alignment:
Q  1 cacatcttcagatgagtcatacgatggtattgtgtacataacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaat 100  Q
    |||||||||||||||| | ||||||| ||||||||||  ||||||||||| || ||| ||||||||||| ||||||||||||||| | |||||||| |||    
T  6810979 cacatcttcagatgagccgtacgatgctattgtgtacccaacggttgaggatattaaatttgaaataaagcctgcacttatttacctggtgcagcaaaat 6811078  T
Q  101 caatttttcggatcacccactgagaattcgaattttcatatttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctac 200  Q
    |||||||||||||||||||||||| || ||||||||||| ||||||||||| ||| |||||||||||| ||||||||||||||| ||| ||||||||| |    
T  6811079 caatttttcggatcacccactgaggatccgaattttcatgtttcaacttttttaagactcagtggaactttgaaggcaaaccaagaggtcgtaaggctgc 6811178  T
Q  201 acctctttcctttttccttaggggataaagttagtgctttgtttctttcattagaagtcggttctatcatttcatggcaacaaatgagg 289  Q
    ||||||||||||| || ||  |||||| || ||||| || ||||| ||||||  || | |||||||| ||||||||| | |||||||||    
T  6811179 acctctttcctttctctttgagggatagagctagtgtttggtttcattcattgaaaattggttctataatttcatgggaccaaatgagg 6811267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 1 - 289
Target Start/End: Complemental strand, 9364887 - 9364599
Alignment:
Q  1 cacatcttcagatgagtcatacgatggtattgtgtacataacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaat 100  Q
    |||||||||||||||| | ||||||| |||||||||   ||||||||||| || ||| ||||||||||| ||||||||||||||| | |||||||| |||    
T  9364887 cacatcttcagatgagccgtacgatgctattgtgtagccaacggttgaggatattaaatttgaaataaagcctgcacttatttacctggtgcagcaaaat 9364788  T
Q  101 caatttttcggatcacccactgagaattcgaattttcatatttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctac 200  Q
    |||||||||||||||||||||||| || ||||||||||| ||||||||||| ||| ||| |||||||| ||||||||||||||| ||||||||||||| |    
T  9364787 caatttttcggatcacccactgaggatccgaattttcatgtttcaacttttttaagacttagtggaactttgaaggcaaaccaagaggccgtaaggctgc 9364688  T
Q  201 acctctttcctttttccttaggggataaagttagtgctttgtttctttcattagaagtcggttctatcatttcatggcaacaaatgagg 289  Q
    ||||||||||||| || ||  |||||| || |||||||| ||||  ||||||  || | |||||||| ||||||||| | |||||||||    
T  9364687 acctctttcctttctctttgagggatagagctagtgcttggtttgattcattgaaaattggttctataatttcatgggaccaaatgagg 9364599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 1 - 289
Target Start/End: Complemental strand, 13092700 - 13092412
Alignment:
Q  1 cacatcttcagatgagtcatacgatggtattgtgtacataacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaat 100  Q
    |||||||||||||||| | | ||||| ||||||||||  ||||||||||| || ||| ||||||||||| ||||||||||||||| | |||||||| |||    
T  13092700 cacatcttcagatgagccgtgcgatgctattgtgtacccaacggttgaggatattaaatttgaaataaagcctgcacttatttacctggtgcagcaaaat 13092601  T
Q  101 caatttttcggatcacccactgagaattcgaattttcatatttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctac 200  Q
    |||||||||||||||||||||||| || ||||| ||||| |||||| |||| ||| |||||||||||| ||||||||||||||| ||||||||||||| |    
T  13092600 caatttttcggatcacccactgaggatccgaatcttcatgtttcaatttttttaagactcagtggaactttgaaggcaaaccaagaggccgtaaggctgc 13092501  T
Q  201 acctctttcctttttccttaggggataaagttagtgctttgtttctttcattagaagtcggttctatcatttcatggcaacaaatgagg 289  Q
    ||||||||||||| || ||  |||||| || | |||||| ||||| ||||||  || | |||||||| ||||||||| | |||||||||    
T  13092500 acctctttcctttctctttgagggatagagctcgtgcttggtttcattcattgaaaattggttctataatttcatgggaccaaatgagg 13092412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 289
Target Start/End: Complemental strand, 3249221 - 3248933
Alignment:
Q  1 cacatcttcagatgagtcatacgatggtattgtgtacataacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaat 100  Q
    |||||||| |||||| |||||||||| ||||||||||  ||| ||| |||||||||| ||||||||||| ||||||||||||||| |||||||||| |||    
T  3249221 cacatctttagatgactcatacgatgctattgtgtacccaacagtttagggtaataaatttgaaataaagcctgcacttatttacctagtgcagcaaaat 3249122  T
Q  101 caatttttcggatcacccactgagaattcgaattttcatatttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctac 200  Q
    |||||||||||||||||||||||| || ||||| ||||| |||||| |||| ||| | |||||||||| ||||||||||||||| ||||||||||||| |    
T  3249121 caatttttcggatcacccactgaggatccgaatcttcatgtttcaatttttttaagattcagtggaactttgaaggcaaaccaagaggccgtaaggctgc 3249022  T
Q  201 acctctttcctttttccttaggggataaagttagtgctttgtttctttcattagaagtcggttctatcatttcatggcaacaaatgagg 289  Q
    ||||||| ||||| || ||  | || | || |||||||| ||||  ||||||  || | |||||||||| ||||||| | |||||||||    
T  3249021 acctcttccctttctctttgagagacagagctagtgcttggtttaattcattgcaaattggttctatcacttcatgggaccaaatgagg 3248933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 60 - 302
Target Start/End: Complemental strand, 26174101 - 26173859
Alignment:
Q  60 ttgaaataaatcctgcacttatttacttagtgcagcagaatcaatttttcggatcacccactgagaattcgaattttcatatttcaacttttctaaaact 159  Q
    |||||||||| ||||||||||||||| |||||||||| ||||||||||||||||||||||||||| || ||||| ||||| |||||| |||  ||| |||    
T  26174101 ttgaaataaagcctgcacttatttacctagtgcagcaaaatcaatttttcggatcacccactgaggatccgaatcttcatgtttcaattttaataagact 26174002  T
Q  160 cagtggaaccttgaaggcaaaccaaaaggccgtaaggctacacctctttcctttttccttaggggataaagttagtgctttgtttctttcattagaagtc 259  Q
    |||| |||| ||||||| ||||||| ||| ||||||| | ||||||||||| || || ||  |||||| || |||||||| ||||| ||||||  || |     
T  26174001 cagtagaactttgaaggaaaaccaagaggacgtaaggatgcacctctttccattctctttgagggatagagctagtgcttggtttcattcattgcaaatt 26173902  T
Q  260 ggttctatcatttcatggcaacaaatgaggcaagcttttcttt 302  Q
    |||||||||| ||||||| |  |||||||| | || |||||||    
T  26173901 ggttctatcacttcatggaacaaaatgaggaaggcatttcttt 26173859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 40 - 294
Target Start/End: Original strand, 17215984 - 17216235
Alignment:
Q  40 aacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaatcaatttttcggatcacccactgagaattcgaattttcat 139  Q
    ||||||||||||||| ||||  || || || ||| ||||  || |||| |||||||| ||||| ||||  ||||||||||||||| || | ||| | |||    
T  17215984 aacggttgagggtaacaatt--gagattaagcctacactacttaacttggtgcagcaaaatcagttttctggatcacccactgaggatccaaatctgcat 17216081  T
Q  140 atttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctacacctctttcctttttccttaggggataaagttagtgctt 239  Q
    || ||||  ||||||| ||||| |||||||||||| || || ||| | || |||| ||| |||||||||| ||| |||||| |||||| || |||||| |    
T  17216082 atctcaatgtttctaagactcattggaaccttgaaagcgaatcaagaagctgtaatgctgcacctctttcttttctccttaagggatagagctagtgc-t 17216180  T
Q  240 tgtttctttcattagaagtcggttctatcatttcatggcaacaaatgaggcaagc 294  Q
    || ||| |||||| ||||| ||||| |||  ||||||| | ||||||||||||||    
T  17216181 tggttcattcattggaagttggttccatcgcttcatgggatcaaatgaggcaagc 17216235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 13088835 - 13088940
Alignment:
Q  1 cacatcttcagatgagtcatacgatggtattgtgtacataacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaat 100  Q
    ||||| |||||||||| | ||||||  ||||||||||  ||||||||||| || ||| ||||||||||| ||||||||||||||| |||||||||| |||    
T  13088835 cacattttcagatgagccgtacgatactattgtgtacccaacggttgaggatattaaatttgaaataaagcctgcacttatttacctagtgcagcaaaat 13088934  T
Q  101 caattt 106  Q
    ||||||    
T  13088935 caattt 13088940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 40 - 277
Target Start/End: Complemental strand, 13511488 - 13511251
Alignment:
Q  40 aacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaatcaatttttcggatcacccactgagaattcgaattttcat 139  Q
    |||||||| ||||||||| || ||||| || ||||||||  |  | || |||||||| ||||| ||||  ||||||||||||||| || | ||| | |||    
T  13511488 aacggttgcgggtaataacttcgaaatcaagcctgcactactcaatttggtgcagcaaaatcagttttctggatcacccactgaggatccaaatctccat 13511389  T
Q  140 atttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctacacctctttcctttttccttaggggataaagttagtgctt 239  Q
    |||||  | || |||| ||||||||| ||| | || |  |||||| | |||||||| || || |||||||| ||||||||| |||||| || ||| ||||    
T  13511388 atttcttccttcctaagactcagtggcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctagcgctt 13511289  T
Q  240 tgtttctttcattagaagtcggttctatcatttcatgg 277  Q
     ||| | |||  ||||||||||||| |||| |||||||    
T  13511288 ggttccattccctagaagtcggttccatcacttcatgg 13511251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 40 - 290
Target Start/End: Complemental strand, 1034 - 784
Alignment:
Q  40 aacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaatcaatttttcggatcacccactgagaattcgaattttcat 139  Q
    |||| |||||||||| ||||| || || || ||||||||  |  | || |||||||| ||||| ||||  ||||||||||||||| || | ||| | |||    
T  1034 aacgattgagggtaacaatttcgagatcaagcctgcactactcaatttggtgcagcaaaatcagttttctggatcacccactgaggatccaaatctccat 935  T
Q  140 atttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctacacctctttcctttttccttaggggataaagttagtgctt 239  Q
    |||||  | || || | ||||||||| ||  | || |  |||||| | |||||||| || || |||||||| ||||||||| |||||| || ||| ||||    
T  934 atttcttccttccttagactcagtggcacgataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctagcgctt 835  T
Q  240 tgtttctttcattagaagtcggttctatcatttcatggcaacaaatgaggc 290  Q
     ||| | |||  ||||||||||||| |||| ||||||| | ||||||||||    
T  834 ggttccattccctagaagtcggttccatcacttcatgggatcaaatgaggc 784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 277
Target Start/End: Original strand, 10142149 - 10142386
Alignment:
Q  40 aacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaatcaatttttcggatcacccactgagaattcgaattttcat 139  Q
    |||||||| ||||||||| || ||||| || ||||||||  |  | ||||||||||| || || ||||  ||||||||||||||| || | ||| | |||    
T  10142149 aacggttgcgggtaataacttcgaaatcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccat 10142248  T
Q  140 atttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctacacctctttcctttttccttaggggataaagttagtgctt 239  Q
    |||||  | || || | ||||||||| ||| | || |  |||||| | |||||||| || || |||||||| ||||||||| |||||| || ||| ||||    
T  10142249 atttcttccttcctcagactcagtggcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctagcgctt 10142348  T
Q  240 tgtttctttcattagaagtcggttctatcatttcatgg 277  Q
     ||| | |||  ||||||||||||| || | |||||||    
T  10142349 ggttccattccctagaagtcggttccattacttcatgg 10142386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 277
Target Start/End: Complemental strand, 11879468 - 11879231
Alignment:
Q  40 aacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaatcaatttttcggatcacccactgagaattcgaattttcat 139  Q
    |||||||||||||||||| || || || || ||||||||  |  | || |||||||| ||||| ||||  ||||||||||||||| || | ||| | |||    
T  11879468 aacggttgagggtaataacttcgagatcaagcctgcactactcaatttggtgcagcaaaatcagttttctggatcacccactgaggatccaaatctccat 11879369  T
Q  140 atttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctacacctctttcctttttccttaggggataaagttagtgctt 239  Q
    |||||  | || || | ||||||||| ||| | || |  |||||| | |||||||| || || |||||||| ||||||||| |||||| || ||| ||||    
T  11879368 atttcttccttccttagactcagtggcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctagcgctt 11879269  T
Q  240 tgtttctttcattagaagtcggttctatcatttcatgg 277  Q
     ||| | |||  ||||||||||||| || | |||||||    
T  11879268 ggttccattccctagaagtcggttccattacttcatgg 11879231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 277
Target Start/End: Original strand, 15640165 - 15640402
Alignment:
Q  40 aacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaatcaatttttcggatcacccactgagaattcgaattttcat 139  Q
    |||||||| ||||||||| || || || || ||||||||  |  | ||||||||||| || || ||||  ||||||||||||||| || | ||| | |||    
T  15640165 aacggttgcgggtaataacttcgagatcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccat 15640264  T
Q  140 atttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctacacctctttcctttttccttaggggataaagttagtgctt 239  Q
    |||||  | || || | ||||||||| ||| | || |  |||||| | |||||||| || ||||||||||| ||||||||| |||||| || ||| ||||    
T  15640265 atttcttccttccttagactcagtggcaccataaaagagaaccaagaagccgtaagacttcacctctttcccttttccttaagggatagagctagcgctt 15640364  T
Q  240 tgtttctttcattagaagtcggttctatcatttcatgg 277  Q
     ||| | |||  ||||||||||||| || | |||||||    
T  15640365 ggttccattccctagaagtcggttccattacttcatgg 15640402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 290
Target Start/End: Complemental strand, 12159787 - 12159685
Alignment:
Q  188 gccgtaaggctacacctctttcctttttccttaggggataaagttagtgctttgtttctttcattagaagtcggttctatcatttcatggcaacaaatga 287  Q
    |||||||| || || |||||||| ||||||||| |||||| || ||| |||| ||| | |||  ||||||||||||| |||| ||||||| | |||||||    
T  12159787 gccgtaagacttcatctctttcccttttccttaagggatagagctagcgcttggttccattccctagaagtcggttccatcacttcatgggatcaaatga 12159688  T
Q  288 ggc 290  Q
    |||    
T  12159687 ggc 12159685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 277
Target Start/End: Complemental strand, 12198597 - 12198360
Alignment:
Q  40 aacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaatcaatttttcggatcacccactgagaattcgaattttcat 139  Q
    ||||||||  |||||||| || ||||| || ||||||||  |  | ||||||||||| || || ||||  ||||||||||||||| || | ||| | |||    
T  12198597 aacggttgcaggtaataacttcgaaatcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccat 12198498  T
Q  140 atttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctacacctctttcctttttccttaggggataaagttagtgctt 239  Q
    |||||  | || || | ||||||||| ||| | || |  |||||| | |||||||| || || |||||||| ||||||||| |||||| || ||| ||||    
T  12198497 atttcttccttccttagactcagtggcaccattaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctagcgctt 12198398  T
Q  240 tgtttctttcattagaagtcggttctatcatttcatgg 277  Q
     ||| | |||  ||||||||||||| || | |||||||    
T  12198397 ggttccattccctagaagtcggttccattacttcatgg 12198360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 277
Target Start/End: Complemental strand, 13141304 - 13141067
Alignment:
Q  40 aacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaatcaatttttcggatcacccactgagaattcgaattttcat 139  Q
    |||||||| ||||||||| || ||||| || ||||||||  |  | |||||||| |||||||| ||||  ||||||||||||||| || | ||| | |||    
T  13141304 aacggttgcgggtaataacttcgaaatcaagcctgcactactcaatttagtgcaacagaatcagttttctggatcacccactgaggatccaaatctccat 13141205  T
Q  140 atttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctacacctctttcctttttccttaggggataaagttagtgctt 239  Q
    |||||  | || || | ||| ||||| ||| | || |  |||||| | |||||||| || || |||||||| ||||||||| |||||| || ||| ||||    
T  13141204 atttcttccttccttagacttagtggcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctagcgctt 13141105  T
Q  240 tgtttctttcattagaagtcggttctatcatttcatgg 277  Q
     ||| | |||  |||||||| |||| || | |||||||    
T  13141104 ggttccattccctagaagtcagttccattacttcatgg 13141067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 277
Target Start/End: Complemental strand, 13192520 - 13192283
Alignment:
Q  40 aacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaatcaatttttcggatcacccactgagaattcgaattttcat 139  Q
    |||||||| ||||||||| || ||||| || ||||||||  |  | |||||||| || || || ||||  ||||||||||||||| || | ||| | |||    
T  13192520 aacggttgggggtaataacttcgaaatcaagcctgcactactcaatttagtgcaacaaaaccagttttctggatcacccactgaggatccaaatctccat 13192421  T
Q  140 atttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctacacctctttcctttttccttaggggataaagttagtgctt 239  Q
    |||||  | || || | ||||||||| ||| | || |  |||||| | |||||||| || || |||||||| ||||||||| |||||| || ||| ||||    
T  13192420 atttcttccttccttagactcagtggcaccattaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctagcgctt 13192321  T
Q  240 tgtttctttcattagaagtcggttctatcatttcatgg 277  Q
     ||| | |||  ||||||||||||| || | |||||||    
T  13192320 ggttccattccctagaagtcggttccattacttcatgg 13192283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 290
Target Start/End: Complemental strand, 13201806 - 13201557
Alignment:
Q  41 acggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaatcaatttttcggatcacccactgagaattcgaattttcata 140  Q
    |||||||||||||| ||||| || || || ||||||||  |  | || |||||||| ||||| ||||  ||||||||||||||| || | ||| | ||||    
T  13201806 acggttgagggtaacaatttcgagatcaagcctgcactactcaatttggtgcagcaaaatcagttttctggatcacccactgaggatccaaatctccata 13201707  T
Q  141 tttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctacacctctttcctttttccttaggggataaagttagtgcttt 240  Q
    ||||  | || || | ||||||||| ||| | || |  |||||| | |||||||| || || |||||||| || |||||| |||||| || ||| ||||     
T  13201706 tttcttccttccttagactcagtggcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttctccttaagggatacagctagcgcttg 13201607  T
Q  241 gtttctttcattagaagtcggttctatcatttcatggcaacaaatgaggc 290  Q
    ||| | |||  || |||| |||||||||  ||||||| | ||||||||||    
T  13201606 gttccattccctataagttggttctatcgcttcatgggatcaaatgaggc 13201557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 277
Target Start/End: Complemental strand, 15634038 - 15633801
Alignment:
Q  40 aacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaatcaatttttcggatcacccactgagaattcgaattttcat 139  Q
    |||||||| ||||||||| || ||||| || ||||||||  |  | || ||||| || ||||| ||||  ||||||||||||||| || | ||| | |||    
T  15634038 aacggttgcgggtaataacttcgaaatcaagcctgcactactcaatttggtgcaacaaaatcagttttctggatcacccactgaggatccaaatctccat 15633939  T
Q  140 atttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctacacctctttcctttttccttaggggataaagttagtgctt 239  Q
    |||||  | || |||| ||||||||| ||| | || |  |||||| | |||||||| || || |||||||| ||||||||| |||||| || ||| ||||    
T  15633938 atttcttccttcctaagactcagtggcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctagcgctt 15633839  T
Q  240 tgtttctttcattagaagtcggttctatcatttcatgg 277  Q
     ||| | |||  ||||||||| ||| || | |||||||    
T  15633838 ggttccattccctagaagtcgattccattacttcatgg 15633801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301 (Bit Score: 150; Significance: 3e-79; HSPs: 1)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 1 - 302
Target Start/End: Complemental strand, 800 - 499
Alignment:
Q  1 cacatcttcagatgagtcatacgatggtattgtgtacataacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaat 100  Q
    |||||||||||||||| | ||||||| ||||||||||  ||||||||||| || ||| ||||||||||| ||||||||||||||| | |||||||| |||    
T  800 cacatcttcagatgagccgtacgatgctattgtgtacccaacggttgaggatattaaatttgaaataaagcctgcacttatttacctggtgcagcaaaat 701  T
Q  101 caatttttcggatcacccactgagaattcgaattttcatatttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctac 200  Q
    |||||||||| ||||||||||||| || |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| || |    
T  700 caatttttcgaatcacccactgaggatccgaattttcatatttcaacttttctaaaactcagtggaactttgaaggcaaaccaagaggccgtaagtctgc 601  T
Q  201 acctctttcctttttccttaggggataaagttagtgctttgtttctttcattagaagtcggttctatcatttcatggcaacaaatgaggcaagcttttct 300  Q
    ||||||||||||| || ||  |||||| || |||||||| ||||| ||||||  || | |||||||| | ||||||| | ||||||||| | || |||||    
T  600 acctctttcctttctctttgagggatagagctagtgcttggtttcattcattgaaaattggttctataacttcatggaaccaaatgaggaaggcatttct 501  T
Q  301 tt 302  Q
    ||    
T  500 tt 499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 145; Significance: 3e-76; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 40 - 297
Target Start/End: Complemental strand, 912 - 659
Alignment:
Q  40 aacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaatcaatttttcggatcacccactgagaattcgaattttcat 139  Q
    |||||||||||||||| ||||||||||||| ||||||||||||||||||||||| || |||||||||||||||||||| |||||| || |||||||||||    
T  912 aacggttgagggtaattattttgaaataaagcctgcacttatttacttagtgcaacaaaatcaatttttcggatcaccgactgaggatccgaattttcat 813  T
Q  140 atttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctacacctctttcctttttccttaggggataaagttagtgctt 239  Q
    ||||| |||||| ||| |||||||||||||||||| ||||||||| | || |||||||| |||    |||||||||||||| |||||| || ||||||||    
T  812 atttctacttttttaagactcagtggaaccttgaatgcaaaccaagaagctgtaaggctgcac----ttcctttttccttaagggatagagctagtgctt 717  T
Q  240 tgtttctttcattagaagtcggttctatcatttcatggcaacaaatgaggcaagcttt 297  Q
     ||||| |||||| ||||| |||||||||| ||||||||| |||||||||||||||||    
T  716 ggtttcattcattggaagttggttctatcacttcatggcaccaaatgaggcaagcttt 659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 145; Significance: 3e-76; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 1 - 289
Target Start/End: Complemental strand, 22070865 - 22070577
Alignment:
Q  1 cacatcttcagatgagtcatacgatggtattgtgtacataacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaat 100  Q
    |||||||||||||||| | ||||||| |||||||||   ||||||||||| || ||| ||||||||||| ||||||||||||||| |||||||||| |||    
T  22070865 cacatcttcagatgagccgtacgatgctattgtgtatccaacggttgaggatattaaatttgaaataaagcctgcacttatttacctagtgcagcaaaat 22070766  T
Q  101 caatttttcggatcacccactgagaattcgaattttcatatttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctac 200  Q
    |||||||||||||||||||||||| || ||||||||||| |||||| |||| ||| |||||||||||| ||||||||||||||| ||||||||||||| |    
T  22070765 caatttttcggatcacccactgaggatccgaattttcatgtttcaatttttttaagactcagtggaactttgaaggcaaaccaagaggccgtaaggctgc 22070666  T
Q  201 acctctttcctttttccttaggggataaagttagtgctttgtttctttcattagaagtcggttctatcatttcatggcaacaaatgagg 289  Q
    ||||||||||||| || ||  |||||| || |||||||| ||||| ||||||  || | |||||||||| ||||||| | |||||||||    
T  22070665 acctctttcctttctctttgagggatagagctagtgcttggtttcattcattgcaaattggttctatcacttcatggaaccaaatgagg 22070577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 28 - 289
Target Start/End: Original strand, 25950364 - 25950625
Alignment:
Q  28 tattgtgtacataacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaatcaatttttcggatcacccactgagaat 127  Q
    ||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| ||    
T  25950364 tattgtgtacgcaacagttgagggtaataattttgaaataaatcctgcacttatttacttagtacagcaaaatcaatttttcggatcacccactgaggat 25950463  T
Q  128 tcgaattttcatatttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctacacctctttcctttttccttaggggata 227  Q
     ||||| | ||| |||||| |||| ||| |||||||||||| || |||||||||||| |||||||||||||||||||||||||||| || ||  ||||||    
T  25950464 ccgaatctccatgtttcaaattttttaagactcagtggaactttaaaggcaaaccaagaggccgtaaggctacacctctttcctttctctttgagggata 25950563  T
Q  228 aagttagtgctttgtttctttcattagaagtcggttctatcatttcatggcaacaaatgagg 289  Q
     || |||||||| ||||| ||||||  || | |||| ||||| ||||||| | |||||||||    
T  25950564 gagctagtgcttggtttcattcattgcaaattggttttatcacttcatgggaccaaatgagg 25950625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 1 - 297
Target Start/End: Original strand, 18845547 - 18845842
Alignment:
Q  1 cacatcttcagatgagtcatacgatggtattgtgtacataacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaat 100  Q
    |||||||||||||||| ||||||||| ||||||||||  |||||||||||||| ||| ||||||||||| ||||||||||||||  |||||||||| |||    
T  18845547 cacatcttcagatgagccatacgatgctattgtgtacccaacggttgagggtattaaatttgaaataaagcctgcacttatttatctagtgcagcaaaat 18845646  T
Q  101 caatttttcggatcacccactgagaattcgaattttcatatttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctac 200  Q
    |||||||||||||||||||||||| || ||||| ||||| |||||| | || ||| |||||||||||| ||| ||||||||||| ||| ||||||| | |    
T  18845647 caatttttcggatcacccactgaggatccgaatcttcatgtttcaa-tattttaagactcagtggaacattggaggcaaaccaagaggtcgtaaggatgc 18845745  T
Q  201 acctctttcctttttccttaggggataaagttagtgctttgtttctttcattagaagtcggttctatcatttcatggcaacaaatgaggcaagcttt 297  Q
    |||||||| ||||||||||| || ||| || |||||||| ||||| ||||||   | | |||||||||| ||||||| | |||||||||| ||||||    
T  18845746 acctcttttctttttccttaaggtatagagctagtgcttggtttcattcattgacaattggttctatcacttcatgggaccaaatgaggcgagcttt 18845842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 1 - 301
Target Start/End: Complemental strand, 12659393 - 12659097
Alignment:
Q  1 cacatcttcagatgagtcatacgatggtattgtgtacataacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaat 100  Q
    |||||||||||||||| |||||| || || |||||||  ||  |||||||   | |||||||||||||| |||||||||||||||| |||||| || |||    
T  12659393 cacatcttcagatgagccatacgctgttactgtgtacccaaaagttgagg---acaattttgaaataaaacctgcacttatttact-agtgcaacaaaat 12659298  T
Q  101 caatttttcggatcacccactgagaattcgaattttcatatttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctac 200  Q
    ||| ||||||||||||| |||| | || | ||| ||||||||||||||||| ||| |||||||||||||| ||||||||||||| ||||| ||||| | |    
T  12659297 caacttttcggatcacctactgtggatccaaatcttcatatttcaacttttttaagactcagtggaacctcgaaggcaaaccaagaggccataaggttgc 12659198  T
Q  201 acctctttcctttttccttaggggataaagttagtgctttgtttctttcattagaagtcggttctatcatttcatggcaacaaatgaggcaagcttttct 300  Q
    ||||||||||||||||||||  | ||| || ||||| || ||||| |||||||||||| |||||||||| ||||||||| ||||||||||||||||||||    
T  12659197 acctctttcctttttccttaaagcatagagctagtgattggtttcattcattagaagttggttctatcacttcatggcaccaaatgaggcaagcttttct 12659098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 302
Target Start/End: Complemental strand, 18191409 - 18191108
Alignment:
Q  1 cacatcttcagatgagtcatacgatggtattgtgtacataacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaat 100  Q
    |||||||||||||||||| ||||||| ||||||||||  |||||||||||||| ||| ||||||||||| ||||||||||||||| | |||||||| |||    
T  18191409 cacatcttcagatgagtcgtacgatgttattgtgtacccaacggttgagggtattaaatttgaaataaagcctgcacttatttacctggtgcagcaaaat 18191310  T
Q  101 caatttttcggatcacccactgagaattcgaattttcatatttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctac 200  Q
    ||||||||||||||||||| |||| ||  |||| ||||| |||||| |||  ||| ||| |||||||| ||||||||||||||| ||||| ||||||| |    
T  18191309 caatttttcggatcacccattgaggatctgaatcttcatgtttcaattttgttaagactgagtggaactttgaaggcaaaccaagaggccataaggctgc 18191210  T
Q  201 acctctttcctttttccttaggggataaagttagtgctttgtttctttcattagaagtcggttctatcatttcatggcaacaaatgaggcaagcttttct 300  Q
    ||||||||||||| || ||  |||||| || |||||||| ||||| ||||||  || | |||||||||| ||||||| | ||||||||| | || |||||    
T  18191209 acctctttcctttctctttgagggatagagctagtgcttggtttcattcattgcaaattggttctatcacttcatggaaccaaatgaggaaggcatttct 18191110  T
Q  301 tt 302  Q
    ||    
T  18191109 tt 18191108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 1 - 289
Target Start/End: Original strand, 17815770 - 17816058
Alignment:
Q  1 cacatcttcagatgagtcatacgatggtattgtgtacataacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaat 100  Q
    |||||||||||||||| | ||||||| ||||||||||  ||||||||||| || ||| ||||||||||| ||||||||||||||| |||||||| | |||    
T  17815770 cacatcttcagatgagccgtacgatgctattgtgtacccaacggttgaggatagtaaatttgaaataaagcctgcacttatttacctagtgcagtaaaat 17815869  T
Q  101 caatttttcggatcacccactgagaattcgaattttcatatttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctac 200  Q
    |||||||||||||||||||||||| ||  |||| ||||| |||||| |||| ||| |||||||||||| ||||||||||||||| ||| ||||||||| |    
T  17815870 caatttttcggatcacccactgaggatctgaatcttcatgtttcaatttttttaagactcagtggaactttgaaggcaaaccaagaggtcgtaaggctgc 17815969  T
Q  201 acctctttcctttttccttaggggataaagttagtgctttgtttctttcattagaagtcggttctatcatttcatggcaacaaatgagg 289  Q
    ||||||||||||| || ||  |||||| || |||||||| ||||| ||||||  || | ||||| |||| ||||||| | |||||||||    
T  17815970 acctctttcctttctctttgagggatagagctagtgcttggtttcattcattgcaaattggttccatcacttcatgggaccaaatgagg 17816058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 289
Target Start/End: Complemental strand, 12656119 - 12655831
Alignment:
Q  1 cacatcttcagatgagtcatacgatggtattgtgtacataacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaat 100  Q
    |||||||||| ||||| | ||||||| ||||||||||  ||| |||||||||| ||| ||||||||||| | ||||||||||||| |||||||||| |||    
T  12656119 cacatcttcaaatgagccgtacgatgctattgtgtacccaacagttgagggtattaaatttgaaataaagcatgcacttatttacctagtgcagcaaaat 12656020  T
Q  101 caatttttcggatcacccactgagaattcgaattttcatatttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctac 200  Q
    |||||||||| ||||||||||||| || ||||| ||||| ||| || |||| ||| |||||||||||| ||||||||||||||| ||||||||||||| |    
T  12656019 caatttttcgaatcacccactgaggatccgaatcttcatgttttaatttttttaagactcagtggaactttgaaggcaaaccaagaggccgtaaggctgc 12655920  T
Q  201 acctctttcctttttccttaggggataaagttagtgctttgtttctttcattagaagtcggttctatcatttcatggcaacaaatgagg 289  Q
    ||||||| ||||| || ||  |||||| || | |||| | ||||| ||||||  || | |||||||||| ||||||| | |||||||||    
T  12655919 acctcttacctttctctttgagggatagagctggtgcctggtttcattcattgcaaattggttctatcacttcatgggaccaaatgagg 12655831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 28 - 294
Target Start/End: Complemental strand, 17792993 - 17792727
Alignment:
Q  28 tattgtgtacataacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaatcaatttttcggatcacccactgagaat 127  Q
    ||||||||||  ||||||||||||||| |||||||||||    | ||||||  |  ||||||||||||| || || |||| |||||| ||||||||| ||    
T  17792993 tattgtgtacccaacggttgagggtaacaattttgaaattttgcatgcactcctcaacttagtgcagcaaaaccagttttccggatcgcccactgaggat 17792894  T
Q  128 tcgaattttcatatttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctacacctctttcctttttccttaggggata 227  Q
      |||| | ||||||||||||||| ||| ||||| | |||||||||||| |||||||  |||||||||||| ||||||||||| ||||||||| ||||||    
T  17792893 ctgaatctgcatatttcaacttttttaagactcaatagaaccttgaaggaaaaccaaggggccgtaaggctgcacctctttcccttttccttaagggata 17792794  T
Q  228 aagttagtgctttgtttctttcattagaagtcggttctatcatttcatggcaacaaatgaggcaagc 294  Q
     || |||||||| ||||| |||||| ||||| |||| ||||| || |||| | ||||||||||||||    
T  17792793 gagctagtgcttggtttcattcatttgaagttggttatatcactttatgggaccaaatgaggcaagc 17792727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 40 - 294
Target Start/End: Complemental strand, 23522901 - 23522647
Alignment:
Q  40 aacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaatcaatttttcggatcacccactgagaattcgaattttcat 139  Q
    |||||| |||||||| |||||||| || || ||||||||  || |||| |||| ||| ||||| ||||  ||||||||||||||| || | ||| |||||    
T  23522901 aacggtagagggtaacaattttgagattaagcctgcactacttaacttggtgcggcaaaatcagttttctggatcacccactgaggatccaaatcttcat 23522802  T
Q  140 atttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctacacctctttcctttttccttaggggataaagttagtgctt 239  Q
    |||||||||||   || ||||||||||||||||||||| |||||| | || |||||| | ||||||||||||||||||||| |||||| || ||||||||    
T  23522801 atttcaactttctcaagactcagtggaaccttgaaggcgaaccaagaagctgtaaggttgcacctctttcctttttccttaagggatagagctagtgctt 23522702  T
Q  240 tgtttctttcattagaagtcggttctatcatttcatggcaacaaatgaggcaagc 294  Q
     ||| | |||| | ||||| ||||| |||| ||||||| | ||||||||||||||    
T  23522701 ggttccattcaatggaagttggttccatcacttcatgggatcaaatgaggcaagc 23522647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 28 - 301
Target Start/End: Complemental strand, 23346190 - 23345918
Alignment:
Q  28 tattgtgtacataacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaatcaatttttcggatcacccactgagaat 127  Q
    ||||||||||  |||||||||| |||| ||||||||||| ||  | |||||| || ||||||||||||| || || ||||  ||||||| || |||| ||    
T  23346190 tattgtgtacccaacggttgagcgtaacaattttgaaattaagtccgcacttcttaacttagtgcagcaaaaccagttttctggatcactcattgaggat 23346091  T
Q  128 tcgaattttcatatttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctacacctctttcctttttccttaggggata 227  Q
      |||| | ||||||||||| ||| ||| ||||||||| |||||||||||||||||| ||| ||||||| |||||||||||||||| |||||| |||||     
T  23346090 ctgaatctgcatatttcaacctttttaagactcagtgggaccttgaaggcaaaccaagaggtcgtaaggttacacctctttcctttctccttaagggat- 23345992  T
Q  228 aagttagtgctttgtttctttcattagaagtcggttctatcatttcatggcaacaaatgaggcaagcttttctt 301  Q
    ||| |||| ||| ||||| |||| |  |||| |||||||||| ||||||| | |||||||| ||||| ||||||    
T  23345991 aagctagttcttggtttcattcagtgaaagttggttctatcacttcatgggaccaaatgagacaagcatttctt 23345918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 31 - 294
Target Start/End: Original strand, 18628514 - 18628777
Alignment:
Q  31 tgtgtacataacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaatcaatttttcggatcacccactgagaattcg 130  Q
    |||||||  ||||||||||||||| |||||||| || || ||||||||  || |||| |||||||| ||||| ||||  ||||||||||||||| || |     
T  18628514 tgtgtacccaacggttgagggtaacaattttgagattaagcctgcactacttaacttggtgcagcaaaatcagttttctggatcacccactgaggatcct 18628613  T
Q  131 aattttcatatttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctacacctctttcctttttccttaggggataaag 230  Q
    ||| | ||||| ||||||||  ||| ||  |||||||||||| | || || ||| | ||| ||||||| |||||||||||||| |||||| |||||| ||    
T  18628614 aatctgcatatctcaactttcttaacacctagtggaaccttggaagcgaatcaagaagccctaaggctgcacctctttcctttctccttaagggatagag 18628713  T
Q  231 ttagtgctttgtttctttcattagaagtcggttctatcatttcatggcaacaaatgaggcaagc 294  Q
     |||||||| ||| | |||||| ||||| ||||| |||| ||||||| | ||||||||| ||||    
T  18628714 ctagtgcttggttccattcattggaagttggttccatcacttcatgggatcaaatgaggaaagc 18628777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 28 - 293
Target Start/End: Complemental strand, 22600380 - 22600115
Alignment:
Q  28 tattgtgtacataacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaatcaatttttcggatcacccactgagaat 127  Q
    ||||||||||  ||| ||||||||||| || | ||| || || ||||||||  || |||| ||||| || ||||||||||  ||||| ||| ||||| ||    
T  22600380 tattgtgtacccaacagttgagggtaacaactctgagattaagcctgcactacttaacttggtgcaacaaaatcaattttcaggatcgcccgctgaggat 22600281  T
Q  128 tcgaattttcatatttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctacacctctttcctttttccttaggggata 227  Q
     | ||| | ||||| ||||||||| ||| | |||| |||| |||||| || || ||| | | ||||||||| ||||| |||||||| |||||| ||||||    
T  22600280 ccaaatctgcatatctcaacttttttaagaatcagcggaaacttgaaagcgaatcaagaagtcgtaaggctgcacctatttcctttctccttaagggata 22600181  T
Q  228 aagttagtgctttgtttctttcattagaagtcggttctatcatttcatggcaacaaatgaggcaag 293  Q
    ||  |||||||| ||| | |||||| ||||| ||||| || | ||||||| | |||||||||||||    
T  22600180 aatctagtgcttggttccattcattggaagttggttccataacttcatgggatcaaatgaggcaag 22600115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 203 - 290
Target Start/End: Complemental strand, 23613759 - 23613672
Alignment:
Q  203 ctctttcctttttccttaggggataaagttagtgctttgtttctttcattagaagtcggttctatcatttcatggcaacaaatgaggc 290  Q
    |||||||| ||||||||| |||||| || |||||||| ||| | ||| |||||||||||||| |||| ||||||| | ||||||||||    
T  23613759 ctctttcccttttccttaagggatagagctagtgcttggttccattccttagaagtcggttccatcacttcatgggatcaaatgaggc 23613672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 28 - 290
Target Start/End: Original strand, 25775904 - 25776166
Alignment:
Q  28 tattgtgtacataacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaatcaatttttcggatcacccactgagaat 127  Q
    ||||||||||  |||||||||||||||||| ||||| || || ||||||||  |  | || |||||||| ||||| ||||  ||||||||||||||| ||    
T  25775904 tattgtgtacccaacggttgagggtaataactttgagattaagcctgcactactcaatttggtgcagcataatcagttttctggatcacccactgaggat 25776003  T
Q  128 tcgaattttcatatttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctacacctctttcctttttccttaggggata 227  Q
     | ||| | ||||| ||  ||||  ||| ||||||||| ||  | || |  |||||| | |||||||| |  || || ||||| ||||||||| ||||||    
T  25776004 ccaaatctccatatctcttctttcttaagactcagtggcactataaaagagaaccaagaagccgtaagacctcatctttttcccttttccttaagggata 25776103  T
Q  228 aagttagtgctttgtttctttcattagaagtcggttctatcatttcatggcaacaaatgaggc 290  Q
     || ||| |||| ||| | |||  ||||||| ||||| |||| ||||||| | ||||||||||    
T  25776104 gagctagcgcttggttccattctctagaagttggttccatcacttcatgggatcaaatgaggc 25776166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 277
Target Start/End: Original strand, 20165289 - 20165526
Alignment:
Q  40 aacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaatcaatttttcggatcacccactgagaattcgaattttcat 139  Q
    |||||||| ||||||||| || ||||| || ||||||||  |  | ||||||||||| || || ||||  ||||||||||||||| || | ||| | |||    
T  20165289 aacggttgcgggtaataacttcgaaatcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccat 20165388  T
Q  140 atttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctacacctctttcctttttccttaggggataaagttagtgctt 239  Q
    |||||  | || || | ||||||||| ||| | || |  |||||| | |||||||| || || |||||||| ||||||||| |||||| || ||| ||||    
T  20165389 atttcttccttcctcagactcagtggcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctagcgctt 20165488  T
Q  240 tgtttctttcattagaagtcggttctatcatttcatgg 277  Q
     ||| | |||  ||||||||||||| || | |||||||    
T  20165489 ggttccattccctagaagtcggttccattacttcatgg 20165526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 192 - 294
Target Start/End: Original strand, 18974503 - 18974605
Alignment:
Q  192 taaggctacacctctttcctttttccttaggggataaagttagtgctttgtttctttcattagaagtcggttctatcatttcatggcaacaaatgaggca 291  Q
    ||||||| ||||||||||||||||| ||| |||||| |  |||||| | ||||| ||||||| | || |||| ||||| ||||||| | ||||||| |||    
T  18974503 taaggctgcacctctttcctttttctttaagggatagatctagtgcatggtttcattcattacaggttggttttatcacttcatggaaccaaatgaagca 18974602  T
Q  292 agc 294  Q
    |||    
T  18974603 agc 18974605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 277
Target Start/End: Complemental strand, 20021261 - 20021024
Alignment:
Q  40 aacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaatcaatttttcggatcacccactgagaattcgaattttcat 139  Q
    |||||||| ||||||||| || || || || ||||||||  |  | ||||||||||| || || ||||  ||||||||||||||| || | ||| | |||    
T  20021261 aacggttgcgggtaataacttcgagatcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccat 20021162  T
Q  140 atttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctacacctctttcctttttccttaggggataaagttagtgctt 239  Q
    |||||  | || || | ||||||||| ||| | || |  |||||| | |||||||| || || |||||||| ||||||||| |||||| || ||| ||||    
T  20021161 atttcttccttccttagactcagtggcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctagcgctt 20021062  T
Q  240 tgtttctttcattagaagtcggttctatcatttcatgg 277  Q
     ||| | |||  ||||||||||||| || | |||||||    
T  20021061 ggttccattccctagaagtcggttccattacttcatgg 20021024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 41 - 124
Target Start/End: Original strand, 11234535 - 11234618
Alignment:
Q  41 acggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaatcaatttttcggatcacccactgag 124  Q
    |||||||||||||| ||||||||||| || ||||||||  || | || ||| |||| ||||| ||||  |||||||||||||||    
T  11234535 acggttgagggtaacaattttgaaatcaagcctgcactacttaatttggtgtagcaaaatcagttttctggatcacccactgag 11234618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 277
Target Start/End: Complemental strand, 24860369 - 24860133
Alignment:
Q  40 aacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaatcaatttttcggatcacccactgagaattcgaattttcat 139  Q
    |||||||| ||||||||| || ||||| || ||||||||  |  | ||||||||||| || || ||||  ||||||||||||||| || | ||| | |||    
T  24860369 aacggttgcgggtaataacttcgaaatcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccat 24860270  T
Q  140 atttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctacacctctttcctttttccttaggggataaagttagtgctt 239  Q
    |||||  | || || | ||||||||| ||| | || |  |||||| | |||||||| || || ||||||||  |||||||| |||||| || ||| ||||    
T  24860269 atttcttccttccttagactcagtggcaccataaaagagaaccaagaagccgtaagacttcatctctttcc-ctttccttaagggatagagctagcgctt 24860171  T
Q  240 tgtttctttcattagaagtcggttctatcatttcatgg 277  Q
     ||| | |||  ||||||||||||| || | |||||||    
T  24860170 ggttccattccctagaagtcggttccattacttcatgg 24860133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 141; Significance: 6e-74; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 1 - 289
Target Start/End: Complemental strand, 15587 - 15299
Alignment:
Q  1 cacatcttcagatgagtcatacgatggtattgtgtacataacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaat 100  Q
    |||||||||||||||| | ||||||| |||||| |||  |||||||||||||| ||| ||||||||||| ||||||||||||||| |||||||||| |||    
T  15587 cacatcttcagatgagccgtacgatgctattgtatacccaacggttgagggtattaaatttgaaataaagcctgcacttatttacctagtgcagcaaaat 15488  T
Q  101 caatttttcggatcacccactgagaattcgaattttcatatttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctac 200  Q
    |||||||||||||||||||||||||||  |||| ||||| |||||| |||| ||| |||||||||||| ||||||||||||||| ||||||||||||| |    
T  15487 caatttttcggatcacccactgagaatctgaatcttcatgtttcaatttttttaagactcagtggaactttgaaggcaaaccaagaggccgtaaggctgc 15388  T
Q  201 acctctttcctttttccttaggggataaagttagtgctttgtttctttcattagaagtcggttctatcatttcatggcaacaaatgagg 289  Q
    ||||||||||||| || ||  |||||| || |||||||| ||||| ||||||  || | ||||| |||| ||||||| | |||||||||    
T  15387 acctctttcctttctctttgagggatagagctagtgcttggtttcattcattgcaaattggttccatcacttcatgggaccaaatgagg 15299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 179 - 290
Target Start/End: Original strand, 187444 - 187555
Alignment:
Q  179 aaccaaaaggccgtaaggctacacctctttcctttttccttaggggataaagttagtgctttgtttctttcattagaagtcggttctatcatttcatggc 278  Q
    |||||| | |||||||| || || |||||||| ||||||||| |||||| || ||| |||| ||| | |||  ||||||||||||| |||| |||||||     
T  187444 aaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctagcgcttagttccattccctagaagtcggttccatcacttcatggg 187543  T
Q  279 aacaaatgaggc 290  Q
    | ||||||||||    
T  187544 atcaaatgaggc 187555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 129; Significance: 9e-67; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 1 - 289
Target Start/End: Original strand, 14879 - 15167
Alignment:
Q  1 cacatcttcagatgagtcatacgatggtattgtgtacataacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaat 100  Q
    ||||||||||||| || | ||||||| ||||||||||  |||||||||||||| ||| ||||||||||| ||||||||||||||  |||||||||| |||    
T  14879 cacatcttcagataagacgtacgatgctattgtgtacccaacggttgagggtattaaatttgaaataaagcctgcacttatttatctagtgcagcaaaat 14978  T
Q  101 caatttttcggatcacccactgagaattcgaattttcatatttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctac 200  Q
    |||||||||| ||||||||||||| || ||||| ||||| |||||| |||| ||| |||||||||||| ||||||||||||||| ||| ||||||||| |    
T  14979 caatttttcgaatcacccactgaggatccgaatcttcatgtttcaaattttttaagactcagtggaactttgaaggcaaaccaagaggacgtaaggctgc 15078  T
Q  201 acctctttcctttttccttaggggataaagttagtgctttgtttctttcattagaagtcggttctatcatttcatggcaacaaatgagg 289  Q
    ||||||||||||| || ||  |||||| || |||||||| ||||| ||||||  || | ||||| |||| ||||||| | |||||||||    
T  15079 acctctttcctttctctttgagggatagagctagtgcttggtttcattcattgcaaattggttccatcacttcatgggaccaaatgagg 15167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 121; Significance: 5e-62; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 289
Target Start/End: Original strand, 34167 - 34455
Alignment:
Q  1 cacatcttcagatgagtcatacgatggtattgtgtacataacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaat 100  Q
    ||||||||||||||||   ||||||| |||| |||||  ||||||||||| || ||| ||||||||||| ||||||||||||||| | |||||||| |||    
T  34167 cacatcttcagatgagctgtacgatgctattttgtacccaacggttgaggatattaaatttgaaataaagcctgcacttatttacctggtgcagcaaaat 34266  T
Q  101 caatttttcggatcacccactgagaattcgaattttcatatttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctac 200  Q
    ||||||||| |||||||||||||| || |||||||||||||||||| |||  ||| |||||||||||| ||||||||||||||| |||||||||||||      
T  34267 caatttttcagatcacccactgaggatccgaattttcatatttcaaatttaataagactcagtggaactttgaaggcaaaccaagaggccgtaaggctga 34366  T
Q  201 acctctttcctttttccttaggggataaagttagtgctttgtttctttcattagaagtcggttctatcatttcatggcaacaaatgagg 289  Q
    | ||| ||||||| || ||  |||||| || |||||||| ||||| ||||||  || | |||||||| ||||||||| | |||||||||    
T  34367 aactcattcctttctctttgagggatagagctagtgcttggtttcattcattgaaaattggttctataatttcatgggaccaaatgagg 34455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 111; Significance: 5e-56; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 1 - 289
Target Start/End: Complemental strand, 745 - 453
Alignment:
Q  1 cacatcttcagatgagtcatacgatggtattgtgtacataacggttgagggtaataatttt-gaaataaatcctgcacttatttacttagtgcagcagaa 99  Q
    |||||||||||||||| | ||||||| |||||||| |  |||||||||||||||||||||| |||||||| | ||||||||||||| |||||||||| ||    
T  745 cacatcttcagatgagccgtacgatgctattgtgtgcccaacggttgagggtaataatttttgaaataaagcttgcacttatttacctagtgcagcaaaa 646  T
Q  100 tcaatttttcggatcacccactgagaattcgaattttcatatttcaacttttctaaaactcagtggaaccttgaaggcaaacca---aaaggccgtaagg 196  Q
    ||||||||||| ||||||||||||| || ||||| || || |||||| |||| ||| |||| ||||||| ||||||||||||||   | |||||||||||    
T  645 tcaatttttcgaatcacccactgaggatccgaatcttaatgtttcaatttttttaagactccgtggaactttgaaggcaaaccaattagaggccgtaagg 546  T
Q  197 ctacacctctttcctttttccttaggggataaagttagtgctttgtttctttcattagaagtcggttctatcatttcatggcaacaaatgagg 289  Q
    || |||||||||||||| || ||  |||||| || ||||| || ||||  ||||||  || | |||||||| ||||||||| | |||||||||    
T  545 ctgcacctctttcctttctctttgagggatatagctagtgtttggttttattcattgaaaattggttctataatttcatgggaccaaatgagg 453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 40 - 294
Target Start/End: Original strand, 169261 - 169513
Alignment:
Q  40 aacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaatcaatttttcggatcacccactgagaattcgaattttcat 139  Q
    |||| |||||||||||||||||||||||   ||| ||||| || |||| |||||||| |||||||||| |||||||||||||||| || || || |||||    
T  169261 aacgattgagggtaataattttgaaatag--cctacacttcttaacttggtgcagcaaaatcaattttccggatcacccactgaggatccgcatcttcat 169358  T
Q  140 atttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctacacctctttcctttttccttaggggataaagttagtgctt 239  Q
    || || ||||||||||  ||| ||||||||||||| ||||||||| ||||| ||||||| ||||||||||||||  | ||| |||||| || |||||| |    
T  169359 atctctacttttctaagtctcggtggaaccttgaaagcaaaccaagaggccataaggctgcacctctttcctttcactttaagggatagagctagtgcat 169458  T
Q  240 tgtttctttcattagaagtcggttctatcatttcatggcaacaaatgaggcaagc 294  Q
     ||||| ||||||| | || |||||||||| ||||||| | ||||||||||||||    
T  169459 ggtttcattcattataggttggttctatcacttcatgggaccaaatgaggcaagc 169513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 98; Significance: 3e-48; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 28 - 301
Target Start/End: Original strand, 22664 - 22937
Alignment:
Q  28 tattgtgtacataacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaatcaatttttcggatcacccactgagaat 127  Q
    ||||||||||  ||||||||||||||| |||||||| || ||  |||||||  || |||| |||||||| ||||| ||||  ||||||||||||||| ||    
T  22664 tattgtgtacccaacggttgagggtaacaattttgagattaagtctgcactacttaacttggtgcagcaaaatcagttttctggatcacccactgaggat 22763  T
Q  128 tcgaattttcatatttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctacacctctttcctttttccttaggggata 227  Q
     | ||| | ||||| ||||||||  ||| ||| |||||||| || ||||| |||||||||| ||||||||| ||||||||||||||||||| | ||||||    
T  22764 ccaaatatgcatatctcaactttcttaagacttagtggaacattcaaggcgaaccaaaaggtcgtaaggctgcacctctttcctttttcctaaagggata 22863  T
Q  228 aagttagtgctttgtttctttcattagaagtcggttctatcatttcatggcaacaaatgaggcaagcttttctt 301  Q
     || |||||||| ||| | |||||| ||||| ||||| |||| ||||||| | |||||||||||||| ||||||    
T  22864 gagatagtgcttggttccattcattggaagttggttccatcacttcatgggatcaaatgaggcaagcatttctt 22937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 98; Significance: 3e-48; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 54975 - 55140
Alignment:
Q  1 cacatcttcagatgagtcatacgatggtattgtgtacataacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaat 100  Q
    |||||||||||||||||||||||||| |||| |||||  |||||||||||||| ||| ||||||||||| ||||||||||||||| ||||||| || |||    
T  54975 cacatcttcagatgagtcatacgatgctattctgtacccaacggttgagggtagtaaatttgaaataaagcctgcacttatttacctagtgcaccaaaat 55074  T
Q  101 caatttttcggatcacccactgagaattcgaattttcatatttcaacttttctaaaactcagtgga 166  Q
    |||||||||||||||||| ||||| || ||||| ||||| |||||| |||||||| ||||||||||    
T  55075 caatttttcggatcacccgctgaggatccgaatcttcatgtttcaatttttctaagactcagtgga 55140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 91; Significance: 4e-44; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 28 - 294
Target Start/End: Original strand, 521828 - 522094
Alignment:
Q  28 tattgtgtacataacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaatcaatttttcggatcacccactgagaat 127  Q
    ||||||||||  ||||||||||||||| ||||||||||| || ||||||||  || |||| |||||||| || || ||||   |||||| ||||||| ||    
T  521828 tattgtgtacccaacggttgagggtaacaattttgaaattaagcctgcactacttaacttggtgcagcaaaaccagttttctagatcactcactgaggat 521927  T
Q  128 tcgaattttcatatttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctacacctctttcctttttccttaggggata 227  Q
     | ||| | ||||||||||||||  | | |||||||||||||| |||||| |||||| |||| ||||||||||| |||||||||||||||||| ||||||    
T  521928 cccaatctgcatatttcaactttcttcagactcagtggaacctagaaggcgaaccaagaggctgtaaggctacatctctttcctttttccttaagggata 522027  T
Q  228 aagttagtgctttgtttctttcattagaagtcggttctatcatttcatggcaacaaatgaggcaagc 294  Q
      | |||||||| ||| | |||||| || || ||||| |||| ||||||| | ||||||||||||||    
T  522028 gcgctagtgcttggttccattcattggaggttggttccatcacttcatgggatcaaatgaggcaagc 522094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 87; Significance: 1e-41; HSPs: 2)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 45 - 287
Target Start/End: Complemental strand, 11019 - 10777
Alignment:
Q  45 ttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaatcaatttttcggatcacccactgagaattcgaattttcatatttc 144  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||||| || |||||||||||| ||||||||| |||| || | ||| ||||||||||    
T  11019 ttgagggtaataattttgaaataaagcttgcacttatttacttagtgcaacaaaatcaatttttcagatcacccattgaggatccaaatcttcatatttc 10920  T
Q  145 aacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctacacctctttcctttttccttaggggataaagttagtgctttgttt 244  Q
     |||||| ||| ||  |||||||| ||| |  |||||||| |||| || | | | |||||||||| |||||| ||| |||||| || |||||| | ||||    
T  10919 tacttttataagacatagtggaactttgtaaacaaaccaagaggctgtcaagttgcacctctttcgtttttctttaagggatagagctagtgcatggttt 10820  T
Q  245 ctttcattagaagtcggttctatcatttcatggcaacaaatga 287  Q
    | ||||||| | || |||||||||| ||||||| | |||||||    
T  10819 cattcattataggttggttctatcacttcatgggaccaaatga 10777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 192 - 294
Target Start/End: Complemental strand, 21983 - 21881
Alignment:
Q  192 taaggctacacctctttcctttttccttaggggataaagttagtgctttgtttctttcattagaagtcggttctatcatttcatggcaacaaatgaggca 291  Q
    ||||||| ||||||||||||||||| ||| |||||| |  |||||| | ||||| ||||||| | || |||| ||||| ||||||| | ||||||| |||    
T  21983 taaggctgcacctctttcctttttctttaagggatagatctagtgcatggtttcattcattacaggttggttttatcacttcatgggaccaaatgacgca 21884  T
Q  292 agc 294  Q
    |||    
T  21883 agc 21881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0816 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold0816
Description:

Target: scaffold0816; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 129 - 6
Alignment:
Q  1 cacatcttcagatgagtcatacgatggtattgtgtacataacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaat 100  Q
    |||||||||||||||| | ||||||| ||||||||||  ||||||||||| || ||| ||||||||||| ||||||||||||||| | |||||||| |||    
T  129 cacatcttcagatgagccgtacgatgctattgtgtacccaacggttgaggatattaaatttgaaataaagcctgcacttatttacctggtgcagcaaaat 30  T
Q  101 caatttttcggatcacccactgag 124  Q
    ||||||||||||||||||||||||    
T  29 caatttttcggatcacccactgag 6  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1092 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold1092
Description:

Target: scaffold1092; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 28 - 294
Target Start/End: Complemental strand, 705 - 439
Alignment:
Q  28 tattgtgtacataacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaatcaatttttcggatcacccactgagaat 127  Q
    ||||||||||  ||||||||||||||| || ||||| || || ||||||||  || |||| |||||||| |||||  |||  ||||| |||  |||| ||    
T  705 tattgtgtacccaacggttgagggtaacaactttgagattaagcctgcactacttaacttggtgcagcaaaatcagatttctggatcgcccgttgaggat 606  T
Q  128 tcgaattttcatatttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctacacctctttcctttttccttaggggata 227  Q
     | ||| | ||||| ||||||||  ||| |||||| ||||| ||||| || || ||| | ||||||||||| || ||||||||||| |||||| ||||||    
T  605 ccaaatctgcatatctcaactttcttaagactcagcggaactttgaaagcgaatcaagaagccgtaaggctgcaactctttcctttctccttaagggata 506  T
Q  228 aagttagtgctttgtttctttcattagaagtcggttctatcatttcatggcaacaaatgaggcaagc 294  Q
     || |||||||| | | | |||||| ||||| ||||| |||| ||||||| | ||||||||||||||    
T  505 gagctagtgcttaggtccattcattggaagttggttccatcacttcatgggatcaaatgaggcaagc 439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1058 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold1058
Description:

Target: scaffold1058; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 28 - 294
Target Start/End: Complemental strand, 2082 - 1816
Alignment:
Q  28 tattgtgtacataacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaatcaatttttcggatcacccactgagaat 127  Q
    ||||||||||  ||||||||||||||| || ||||| || || ||||||||  || |||| |||||||| |||||  |||  ||||| |||  |||| ||    
T  2082 tattgtgtacccaacggttgagggtaacaactttgagattaagcctgcactacttaacttggtgcagcaaaatcagatttctggatcgcccgttgaggat 1983  T
Q  128 tcgaattttcatatttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctacacctctttcctttttccttaggggata 227  Q
     | ||| | ||||| ||||||||  ||| |||||| ||||| ||||| || || ||| | ||||||||||| || ||||||||||| |||||| ||||||    
T  1982 ccaaatctgcatatctcaactttcttaagactcagcggaactttgaaagcgaatcaagaagccgtaaggctgcaactctttcctttctccttaagggata 1883  T
Q  228 aagttagtgctttgtttctttcattagaagtcggttctatcatttcatggcaacaaatgaggcaagc 294  Q
     || |||||||| | | | |||||| ||||| ||||| |||| ||||||| | ||||||||||||||    
T  1882 gagctagtgcttaggtccattcattggaagttggttccatcacttcatgggatcaaatgaggcaagc 1816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 170 - 302
Target Start/End: Original strand, 4 - 136
Alignment:
Q  170 ttgaaggcaaaccaaaaggccgtaaggctacacctctttcctttttccttaggggataaagttagtgctttgtttctttcattagaagtcggttctatca 269  Q
    ||||||||||||||| ||||||||||||| |||||||||||||| || ||  |||||| || |||||||| ||||| ||||||  || | ||||||||||    
T  4 ttgaaggcaaaccaagaggccgtaaggctccacctctttcctttctctttgagggatagagctagtgcttggtttcattcattgcaaattggttctatca 103  T
Q  270 tttcatggcaacaaatgaggcaagcttttcttt 302  Q
     ||||||| | ||||||||| | || |||||||    
T  104 cttcatggaaccaaatgaggaaggcatttcttt 136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 117 - 289
Target Start/End: Original strand, 35075 - 35247
Alignment:
Q  117 ccactgagaattcgaattttcatatttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctacacctctttcctttttc 216  Q
    |||||||| ||  |||| ||||| |||||| |||| ||| |||||||| ||| ||||||||||||||| |||||||| | || |||||||||||||| ||    
T  35075 ccactgaggatctgaatcttcatgtttcaatttttataagactcagtgcaactttgaaggcaaaccaagaggccgtacgactgcacctctttcctttctc 35174  T
Q  217 cttaggggataaagttagtgctttgtttctttcattagaagtcggttctatcatttcatggcaacaaatgagg 289  Q
     ||  |||||| || |||||||| ||||| ||||||  || | |||| ||||| ||||||| | |||||||||    
T  35175 tttgagggatagagctagtgcttggtttcattcattgcaaattggttatatcacttcatgggaccaaatgagg 35247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0506 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0506
Description:

Target: scaffold0506; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 179 - 294
Target Start/End: Complemental strand, 6672 - 6557
Alignment:
Q  179 aaccaaaaggccgtaaggctacacctctttcctttttccttaggggataaagttagtgctttgtttctttcattagaagtcggttctatcatttcatggc 278  Q
    |||||| | |||||||| || || |||||||| ||||||||| |||||| || ||| |||| ||| | |||  ||||||||||||| |||| |||||||     
T  6672 aaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctagcgcttggttccattccctagaagtcggttccatcacttcatggg 6573  T
Q  279 aacaaatgaggcaagc 294  Q
    | ||||||||||||||    
T  6572 atcaaatgaggcaagc 6557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 277
Target Start/End: Original strand, 6389 - 6626
Alignment:
Q  40 aacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaatcaatttttcggatcacccactgagaattcgaattttcat 139  Q
    |||||||| ||||||||| || ||||| || ||||||||  |  | ||||||||||| || || ||||  ||||||||||||||| || | ||| | |||    
T  6389 aacggttgcgggtaataacttcgaaatcaagcctgcactactcaatttagtgcagcaaaaccagttttctggatcacccactgaggatccaaatctccat 6488  T
Q  140 atttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctacacctctttcctttttccttaggggataaagttagtgctt 239  Q
    |||||  | || || | ||||||||| ||| | || |  |||||| | |||||||| || || |||||||| ||||||||| |||||| || ||| ||||    
T  6489 atttcttccttccttagactcagtggcaccataaaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctagcgctt 6588  T
Q  240 tgtttctttcattagaagtcggttctatcatttcatgg 277  Q
     ||| | |||  ||||||||||||| || | |||||||    
T  6589 ggttccattccctagaagtcggttccattacttcatgg 6626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0346 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0346
Description:

Target: scaffold0346; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 179 - 290
Target Start/End: Complemental strand, 1315 - 1204
Alignment:
Q  179 aaccaaaaggccgtaaggctacacctctttcctttttccttaggggataaagttagtgctttgtttctttcattagaagtcggttctatcatttcatggc 278  Q
    |||||| | ||||||||||| || |||||||| ||||||||| ||| || || ||| |||| ||| | |||  ||||||||||||| |||| |||||||     
T  1315 aaccaagaagccgtaaggcttcatctctttcccttttccttaaggggtagagctagcgcttggttccattccctagaagtcggttccatcacttcatgga 1216  T
Q  279 aacaaatgaggc 290  Q
    | ||||||||||    
T  1215 atcaaatgaggc 1204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 179 - 290
Target Start/End: Original strand, 48287 - 48398
Alignment:
Q  179 aaccaaaaggccgtaaggctacacctctttcctttttccttaggggataaagttagtgctttgtttctttcattagaagtcggttctatcatttcatggc 278  Q
    |||||| | |||||||| || || |||||||| ||||||||| |||||| || ||| |||| ||| | |||  ||||||||||||| |||| |||||||     
T  48287 aaccaagaagccgtaagacttcatctctttccattttccttaagggatagagctagcgcttggttccattccctagaagtcggttccatcacttcatggg 48386  T
Q  279 aacaaatgaggc 290  Q
    | ||||||||||    
T  48387 atcaaatgaggc 48398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 179 - 290
Target Start/End: Complemental strand, 368350 - 368239
Alignment:
Q  179 aaccaaaaggccgtaaggctacacctctttcctttttccttaggggataaagttagtgctttgtttctttcattagaagtcggttctatcatttcatggc 278  Q
    |||||| | |||||||| || || |||||||| ||||||||| |||||| || ||| |||| ||| | |||  ||||||||||||| |||| |||||||     
T  368350 aaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctagcgcttggttccattccctagaagtcggttccatcacttcatggg 368251  T
Q  279 aacaaatgaggc 290  Q
    | ||||||||||    
T  368250 atcaaatgaggc 368239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 277
Target Start/End: Original strand, 25591 - 25828
Alignment:
Q  40 aacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaatcaatttttcggatcacccactgagaattcgaattttcat 139  Q
    ||||||||||||||| || || || || || ||||||||  |  | || |||||||| ||||| ||||  ||||||||||||||| || | ||| | |||    
T  25591 aacggttgagggtaacaacttcgagatcaagcctgcactactcaatttggtgcagcaaaatcagttttctggatcacccactgaggatccaaatctccat 25690  T
Q  140 atttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctacacctctttcctttttccttaggggataaagttagtgctt 239  Q
    |||||  | || || | ||||||||| ||| |  | |  |||||| | |||||||| || || |||||||| ||||||||| |||||| || ||| ||||    
T  25691 atttcttccttccttagactcagtggcaccatagaagagaaccaagaagccgtaagacttcatctctttcccttttccttaagggatagagctagcgctt 25790  T
Q  240 tgtttctttcattagaagtcggttctatcatttcatgg 277  Q
     ||| | |||  ||||||||||||| |||| |||||||    
T  25791 ggttccattccctagaagtcggttccatcacttcatgg 25828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0630 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0630
Description:

Target: scaffold0630; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 277
Target Start/End: Original strand, 366 - 603
Alignment:
Q  40 aacggttgagggtaataattttgaaataaatcctgcacttatttacttagtgcagcagaatcaatttttcggatcacccactgagaattcgaattttcat 139  Q
    ||||||||||||||| || || || || || ||||||||  |  | || ||||| || ||||| ||||  ||||||||||||||| || | ||| | |||    
T  366 aacggttgagggtaaaaacttcgagatcaagcctgcactactcaatttggtgcaacaaaatcagttttctggatcacccactgaggatccaaatctccat 465  T
Q  140 atttcaacttttctaaaactcagtggaaccttgaaggcaaaccaaaaggccgtaaggctacacctctttcctttttccttaggggataaagttagtgctt 239  Q
    |||||  | || || | ||||||||| ||| | || |  |||||| | || ||||| || || |||||||| ||||||||| |||||| || ||| ||||    
T  466 atttcttccttccttagactcagtggcaccattaaagagaaccaagaagcggtaagacttcatctctttcccttttccttaagggatagagctagcgctt 565  T
Q  240 tgtttctttcattagaagtcggttctatcatttcatgg 277  Q
     ||| | |||  ||||||||||||| |||| |||||||    
T  566 ggttccattccctagaagtcggttccatcacttcatgg 603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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