View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17682_low_22 (Length: 281)
Name: NF17682_low_22
Description: NF17682
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17682_low_22 |
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Alignment Details
Target: chr6 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 9 - 263
Target Start/End: Complemental strand, 34565026 - 34564772
Alignment:
| Q |
9 |
gagatgaatcagtgtagcagactaaatcataaaagcacatgtccttagcaagagttagcccttgatgaatgccataaagttctgcttcgaggatgccaac |
108 |
Q |
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| T |
34565026 |
gagaggaatcagtgtagcagactaaatcataaaagcacatgtccttagcaagagttagcccttgatgaatgccataaagttctgcttcgaggatgccaac |
34564927 |
T |
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| Q |
109 |
ttaactctttgataactaaaaatatagcacgccaagaccattagagcttcgaatgagatcaccaatgccattctaaaaaggaatgtgaaagcaacttcca |
208 |
Q |
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||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| |
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| T |
34564926 |
ttaacacgttgataactaaaaatatagcacgccaagaccattagagcttcgaatgagatcaccaatgccattctaaaaagtaatgtgaaatcaacttcca |
34564827 |
T |
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| Q |
209 |
tcaacattgatgattgagccgaatagattcaatgagttcgacttaatatttccac |
263 |
Q |
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| T |
34564826 |
tcaacattgatgattgagccgaatagattcaatgagttcgacttaatatttccac |
34564772 |
T |
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