View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17682_low_25 (Length: 250)
Name: NF17682_low_25
Description: NF17682
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17682_low_25 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 1 - 250
Target Start/End: Original strand, 13577151 - 13577400
Alignment:
| Q |
1 |
aaaataaacgctgatttagagaatgatttagcgatcatttgaaaaattaatagcttaagacactagagtattttgtcactaaaatagtggctagatagaa |
100 |
Q |
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| T |
13577151 |
aaaaaaaacgctgatttagagaatgatttagcgatcatttgaaaaattaatagcttaagacactagagtattttgtcactaaaatagtggctagatagaa |
13577250 |
T |
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| Q |
101 |
atttttagtaggagaaatacttggccaattaannnnnnncctttcttaaaatactttgccaattatctttgtaatctgacatagttaaatatttgtgtaa |
200 |
Q |
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| T |
13577251 |
atttttagtaggagaaatacttggccaattaatttttttcctttcttaaaatactttgccaattatctttgtaatctgacatagttaaatatttgtgtaa |
13577350 |
T |
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| Q |
201 |
aaaacatattaagagtgaatagtaattaaattagataggataaatgttac |
250 |
Q |
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| T |
13577351 |
gaaacatattaagagtgaatagtaattaaattagataggataaatgttac |
13577400 |
T |
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