View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17682_low_26 (Length: 226)
Name: NF17682_low_26
Description: NF17682
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17682_low_26 |
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Alignment Details
Target: chr6 (Bit Score: 182; Significance: 2e-98; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 10 - 191
Target Start/End: Original strand, 5625866 - 5626047
Alignment:
| Q |
10 |
attattcttttggcatgcatttttggtcgatgctaacattgattttttaagttcttatggtagaaaaggaaagaataagaaataaaagagaggatataaa |
109 |
Q |
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| T |
5625866 |
attattcttttggcatgcatttttggtcgatgctaacattgattttttaagttcttatggtagaaaaggaaagaataagaaataaaagagaggatataaa |
5625965 |
T |
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| Q |
110 |
tggcaaaagttgcatttctactatatttcttcataatagatacaaagaaaattgtatggttcaagtccaacacacaaaattc |
191 |
Q |
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| T |
5625966 |
tggcaaaagttgcatttctactatatttcttcataatagatacaaagaaaattgtatggttcaagtccaacacacaaaattc |
5626047 |
T |
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