View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17683_high_4 (Length: 403)

Name: NF17683_high_4
Description: NF17683
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17683_high_4
NF17683_high_4
[»] chr2 (8 HSPs)
chr2 (14-390)||(24115601-24115979)
chr2 (321-388)||(14470582-14470649)
chr2 (321-388)||(32545869-32545936)
chr2 (319-359)||(14464552-14464592)
chr2 (334-388)||(14229356-14229410)
chr2 (324-386)||(14892343-14892405)
chr2 (339-388)||(33018626-33018675)
chr2 (324-388)||(16514505-16514569)
[»] chr7 (9 HSPs)
chr7 (321-388)||(41945936-41946003)
chr7 (328-399)||(45231920-45231991)
chr7 (328-388)||(38975802-38975862)
chr7 (324-388)||(27028721-27028785)
chr7 (324-387)||(11016951-11017014)
chr7 (328-379)||(34854785-34854836)
chr7 (324-386)||(4290628-4290690)
chr7 (328-388)||(11016866-11016926)
chr7 (324-380)||(42628384-42628440)
[»] chr6 (5 HSPs)
chr6 (320-387)||(17750892-17750958)
chr6 (324-388)||(24587454-24587518)
chr6 (324-380)||(24618594-24618650)
chr6 (324-388)||(17750983-17751047)
chr6 (328-388)||(24975749-24975809)
[»] chr5 (16 HSPs)
chr5 (324-386)||(12913796-12913858)
chr5 (319-388)||(16439126-16439195)
chr5 (324-388)||(2953271-2953335)
chr5 (324-387)||(291179-291242)
chr5 (321-388)||(3180141-3180207)
chr5 (327-388)||(19655239-19655300)
chr5 (319-388)||(32485630-32485699)
chr5 (324-388)||(16971225-16971289)
chr5 (324-388)||(29699448-29699512)
chr5 (330-380)||(12913892-12913942)
chr5 (328-378)||(19598329-19598379)
chr5 (334-388)||(28818998-28819052)
chr5 (328-388)||(291094-291154)
chr5 (324-380)||(2093930-2093986)
chr5 (324-376)||(2356364-2356416)
chr5 (324-388)||(3899920-3899984)
[»] chr1 (7 HSPs)
chr1 (327-388)||(9157306-9157367)
chr1 (319-388)||(49444901-49444970)
chr1 (324-388)||(48993910-48993974)
chr1 (339-388)||(28395645-28395694)
chr1 (328-388)||(29179678-29179738)
chr1 (324-388)||(32540829-32540893)
chr1 (328-388)||(37155043-37155103)
[»] chr8 (7 HSPs)
chr8 (324-388)||(5667090-5667154)
chr8 (324-388)||(5033242-5033306)
chr8 (320-380)||(34229630-34229690)
chr8 (328-388)||(8243469-8243529)
chr8 (328-388)||(22649842-22649902)
chr8 (324-388)||(35440962-35441026)
chr8 (328-388)||(35441050-35441110)
[»] chr4 (7 HSPs)
chr4 (324-388)||(6271783-6271847)
chr4 (324-388)||(42375091-42375155)
chr4 (320-377)||(19184492-19184549)
chr4 (315-380)||(35682150-35682215)
chr4 (321-386)||(44380013-44380078)
chr4 (324-388)||(47661923-47661987)
chr4 (328-388)||(51265442-51265502)
[»] scaffold0586 (1 HSPs)
scaffold0586 (321-388)||(7128-7194)
[»] chr3 (8 HSPs)
chr3 (321-388)||(33689166-33689233)
chr3 (322-388)||(50524783-50524849)
chr3 (320-378)||(55223221-55223279)
chr3 (327-388)||(41753045-41753106)
chr3 (324-388)||(45103102-45103166)
chr3 (318-385)||(18321638-18321705)
chr3 (327-388)||(1801442-1801503)
chr3 (324-380)||(30734491-30734547)
[»] scaffold0180 (1 HSPs)
scaffold0180 (316-388)||(19107-19179)
[»] scaffold0016 (1 HSPs)
scaffold0016 (324-388)||(49696-49760)


Alignment Details
Target: chr2 (Bit Score: 331; Significance: 0; HSPs: 8)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 331; E-Value: 0
Query Start/End: Original strand, 14 - 390
Target Start/End: Original strand, 24115601 - 24115979
Alignment:
Q  14 gtatcaacattttgatctgatgcaagagtctatttttgttggcaagagtttaataacagactacgaagaagataattatatggttaaacagggttaagtg 113  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  24115601 gtatcaacattttgatctggtgcaagagtctatttttgttggcaagagtttaataatagactacgcagaagataattatatggttaaacagggttaagtg 24115700  T
Q  114 ttaacatgaacgaagataaaagaaactatgttggagaa-gaaggaagaaaacattaa-tatcaccttattataatagttagactctacagggagagactc 211  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  24115701 ttaacatgaaagaagataaaagaaactatgttggagaaagaaggaagaaaacattaaatatcaccttattataatagttagactctacagggagagactc 24115800  T
Q  212 ttccactgcttgtttcttctaagaaaggaagggtctagtataaatagagggaaaaaagaacaatacgtgcagcagaagccggatttgaaaaatgagttaa 311  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  24115801 ttccactgcttgtttcttctaagaaaggaggggtctagtataaatagagggaaaaaagaacaatacgtgcatcagaagccggatttgaaaaatgagttaa 24115900  T
Q  312 ataatatatggatagcacttgtgtgagatagagttgagtcacattggtaacattggtcaatcacaatgttacaatgcct 390  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  24115901 ataacatatggatagcacttgtgtgagatagagttgagtcacattggtaacattggccaatcacaatgttacaatgcct 24115979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 321 - 388
Target Start/End: Original strand, 14470582 - 14470649
Alignment:
Q  321 ggatagcacttgtgtgagatagagttgagtcacattggtaacattggtcaatcacaatgttacaatgc 388  Q
    ||||||||||||||||| ||||||||| || |||||||| ||||||  ||||||||||||| ||||||    
T  14470582 ggatagcacttgtgtgacatagagttgggtgacattggtgacattgaccaatcacaatgttgcaatgc 14470649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 321 - 388
Target Start/End: Complemental strand, 32545936 - 32545869
Alignment:
Q  321 ggatagcacttgtgtgagatagagttgagtcacattggtaacattggtcaatcacaatgttacaatgc 388  Q
    |||||||||||| |||| |||||||| ||| |||||||| ||||||| |||||| ||||| |||||||    
T  32545936 ggatagcacttgggtgacatagagtttagtgacattggtgacattggccaatcataatgtcacaatgc 32545869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 319 - 359
Target Start/End: Original strand, 14464552 - 14464592
Alignment:
Q  319 atggatagcacttgtgtgagatagagttgagtcacattggt 359  Q
    ||||||||||||||||||| |||||||||||| ||||||||    
T  14464552 atggatagcacttgtgtgacatagagttgagtgacattggt 14464592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 334 - 388
Target Start/End: Original strand, 14229356 - 14229410
Alignment:
Q  334 gtgagatagagttgagtcacattggtaacattggtcaatcacaatgttacaatgc 388  Q
    |||| ||||||||  || |||||||| |||||||||||||||||||| |||||||    
T  14229356 gtgacatagagttcggtgacattggtgacattggtcaatcacaatgtcacaatgc 14229410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 386
Target Start/End: Complemental strand, 14892405 - 14892343
Alignment:
Q  324 tagcacttgtgtgagatagagttgagtcacattggtaacattggtcaatcacaatgttacaat 386  Q
    ||||| ||| |||| |||||||||  | |||||||| |||||| |||||||||||||||||||    
T  14892405 tagcatttgggtgacatagagttggatgacattggtgacattgatcaatcacaatgttacaat 14892343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 388
Target Start/End: Complemental strand, 33018675 - 33018626
Alignment:
Q  339 atagagttgagtcacattggtaacattggtcaatcacaatgttacaatgc 388  Q
    ||||||||| || |||||||| | |||||||||||||||||| |||||||    
T  33018675 atagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgc 33018626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 388
Target Start/End: Complemental strand, 16514569 - 16514505
Alignment:
Q  324 tagcacttgtgtgagatagagttgagtcacattggtaacattggtcaatcacaatgttacaatgc 388  Q
    ||||||||| |||| ||||||||| || | |||||| ||||||  |||||||||||| |||||||    
T  16514569 tagcacttgggtgacatagagttgggtgagattggtgacattgaccaatcacaatgtcacaatgc 16514505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 6e-16; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 321 - 388
Target Start/End: Complemental strand, 41946003 - 41945936
Alignment:
Q  321 ggatagcacttgtgtgagatagagttgagtcacattggtaacattggtcaatcacaatgttacaatgc 388  Q
    ||||| |||||| |||| ||| |||||||| |||||||||| ||||||||||||||||||||||||||    
T  41946003 ggataacacttgggtgacataaagttgagtgacattggtaatattggtcaatcacaatgttacaatgc 41945936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 328 - 399
Target Start/End: Complemental strand, 45231991 - 45231920
Alignment:
Q  328 acttgtgtgagatagagttgagtcacattggtaacattggtcaatcacaatgttacaatgcctttgattctc 399  Q
    ||||| |||| ||||||||| || |||||||| ||||||| |||||||||||||||||||| |||| |||||    
T  45231991 acttgggtgacatagagttgggtgacattggtgacattggccaatcacaatgttacaatgcttttgtttctc 45231920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 328 - 388
Target Start/End: Original strand, 38975802 - 38975862
Alignment:
Q  328 acttgtgtgagatagagttgagtcacattggtaacattggtcaatcacaatgttacaatgc 388  Q
    ||||| |||| ||||||||| || ||||||||||||||||||||||||||||  |||||||    
T  38975802 acttgggtgacatagagttgggtgacattggtaacattggtcaatcacaatgccacaatgc 38975862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 324 - 388
Target Start/End: Original strand, 27028721 - 27028785
Alignment:
Q  324 tagcacttgtgtgagatagagttgagtcacattggtaacattggtcaatcacaatgttacaatgc 388  Q
    ||||||||  |||| ||| |||||||| |||||||| ||||||| |||||||||||| |||||||    
T  27028721 tagcactttggtgacatatagttgagtgacattggtgacattggacaatcacaatgtcacaatgc 27028785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 324 - 387
Target Start/End: Complemental strand, 11017014 - 11016951
Alignment:
Q  324 tagcacttgtgtgagatagagttgagtcacattggtaacattggtcaatcacaatgttacaatg 387  Q
    ||||||||| |||| ||||||||| || |||||||| ||||||  |||||||||||| ||||||    
T  11017014 tagcacttgggtgacatagagttgggtgacattggtgacattgaccaatcacaatgtcacaatg 11016951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 328 - 379
Target Start/End: Complemental strand, 34854836 - 34854785
Alignment:
Q  328 acttgtgtgagatagagttgagtcacattggtaacattggtcaatcacaatg 379  Q
    ||||| |||| ||||||||| || |||||||| |||||||||||||||||||    
T  34854836 acttgggtgacatagagttgggtgacattggtgacattggtcaatcacaatg 34854785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 386
Target Start/End: Complemental strand, 4290690 - 4290628
Alignment:
Q  324 tagcacttgtgtgagatagagttgagtcacattggtaacattggtcaatcacaatgttacaat 386  Q
    ||||||||| |||| ||| ||||| || |||||||| ||||||| |||||||||||| |||||    
T  4290690 tagcacttgggtgacatacagttgggtgacattggtgacattggccaatcacaatgtcacaat 4290628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 328 - 388
Target Start/End: Original strand, 11016866 - 11016926
Alignment:
Q  328 acttgtgtgagatagagttgagtcacattggtaacattggtcaatcacaatgttacaatgc 388  Q
    ||||| |||| ||||||||| || |||||||| ||||||| |||||||||||  |||||||    
T  11016866 acttgggtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgc 11016926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 380
Target Start/End: Complemental strand, 42628440 - 42628384
Alignment:
Q  324 tagcacttgtgtgagatagagttgagtcacattggtaacattggtcaatcacaatgt 380  Q
    ||||||||| |||| ||||||||| || |||||||| | ||||| ||||||||||||    
T  42628440 tagcacttgggtgacatagagttgggtgacattggtgatattggccaatcacaatgt 42628384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 6e-16; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 320 - 387
Target Start/End: Original strand, 17750892 - 17750958
Alignment:
Q  320 tggatagcacttgtgtgagatagagttgagtcacattggtaacattggtcaatcacaatgttacaatg 387  Q
    |||||||||||||||||| |||||||||| | |||||||| |||||||||||||||||||| ||||||    
T  17750892 tggatagcacttgtgtgacatagagttga-tgacattggtgacattggtcaatcacaatgtcacaatg 17750958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 324 - 388
Target Start/End: Original strand, 24587454 - 24587518
Alignment:
Q  324 tagcacttgtgtgagatagagttgagtcacattggtaacattggtcaatcacaatgttacaatgc 388  Q
    ||||||||  |||| ||||||||| || ||||| || |||||||||||||||||||| |||||||    
T  24587454 tagcacttaggtgacatagagttgggtgacattagtgacattggtcaatcacaatgtcacaatgc 24587518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 324 - 380
Target Start/End: Original strand, 24618594 - 24618650
Alignment:
Q  324 tagcacttgtgtgagatagagttgagtcacattggtaacattggtcaatcacaatgt 380  Q
    ||||||||| |||| ||||||||| || |||||||| |||||| |||||||||||||    
T  24618594 tagcacttgagtgacatagagttgggtgacattggtgacattgatcaatcacaatgt 24618650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 388
Target Start/End: Complemental strand, 17751047 - 17750983
Alignment:
Q  324 tagcacttgtgtgagatagagttgagtcacattggtaacattggtcaatcacaatgttacaatgc 388  Q
    |||||||||||||| ||||||||| || | |||| | ||||||| | |||||||||| |||||||    
T  17751047 tagcacttgtgtgacatagagttgggtgatattgatgacattggccgatcacaatgtcacaatgc 17750983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 328 - 388
Target Start/End: Original strand, 24975749 - 24975809
Alignment:
Q  328 acttgtgtgagatagagttgagtcacattggtaacattggtcaatcacaatgttacaatgc 388  Q
    ||||| |||| |||||||||  | |||||||| |||||||||||||||||||  |||||||    
T  24975749 acttgggtgacatagagttggctgacattggtgacattggtcaatcacaatgccacaatgc 24975809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 324 - 386
Target Start/End: Original strand, 12913796 - 12913858
Alignment:
Q  324 tagcacttgtgtgagatagagttgagtcacattggtaacattggtcaatcacaatgttacaat 386  Q
    |||||||||||||| ||| |||||||| |||||||| ||||||| |||||||||||| |||||    
T  12913796 tagcacttgtgtgacatatagttgagtgacattggtgacattggccaatcacaatgtcacaat 12913858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 319 - 388
Target Start/End: Original strand, 16439126 - 16439195
Alignment:
Q  319 atggatagcacttgtgtgagatagagttgagtcacattggtaacattggtcaatcacaatgttacaatgc 388  Q
    ||||||||||||||  ||| ||||||||| || | |||||| |||||||||||||||||||| |||||||    
T  16439126 atggatagcacttggatgatatagagttgggtaatattggtgacattggtcaatcacaatgtcacaatgc 16439195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 324 - 388
Target Start/End: Complemental strand, 2953335 - 2953271
Alignment:
Q  324 tagcacttgtgtgagatagagttgagtcacattggtaacattggtcaatcacaatgttacaatgc 388  Q
    ||||||||| |||| ||||||||| || |||||||| ||||||| |||||||||||| |||||||    
T  2953335 tagcacttgggtgacatagagttgggtgacattggtgacattggccaatcacaatgtcacaatgc 2953271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 324 - 387
Target Start/End: Complemental strand, 291242 - 291179
Alignment:
Q  324 tagcacttgtgtgagatagagttgagtcacattggtaacattggtcaatcacaatgttacaatg 387  Q
    ||||||||| |||| ||||||||| || |||||||| |||||| ||||||||||||| ||||||    
T  291242 tagcacttgggtgatatagagttgggtgacattggtgacattgatcaatcacaatgtcacaatg 291179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 321 - 388
Target Start/End: Complemental strand, 3180207 - 3180141
Alignment:
Q  321 ggatagcacttgtgtgagatagagttgagtcacattggtaacattggtcaatcacaatgttacaatgc 388  Q
    ||||||||||||||| | ||||||||| || |||||||| |||||||||||||||||||  |||||||    
T  3180207 ggatagcacttgtgtcacatagagttg-gtaacattggtgacattggtcaatcacaatgccacaatgc 3180141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 327 - 388
Target Start/End: Complemental strand, 19655300 - 19655239
Alignment:
Q  327 cacttgtgtgagatagagttgagtcacattggtaacattggtcaatcacaatgttacaatgc 388  Q
    |||||| |||| |||||||||||| |||||||| ||||||  |||||||||||| |||||||    
T  19655300 cacttgggtgacatagagttgagtgacattggtgacattgtccaatcacaatgtcacaatgc 19655239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 319 - 388
Target Start/End: Complemental strand, 32485699 - 32485630
Alignment:
Q  319 atggatagcacttgtgtgagatagagttgagtcacattggtaacattggtcaatcacaatgttacaatgc 388  Q
    ||||||| ||||||||||| | ||||||| || |||||||| |||||| ||||||||||| | |||||||    
T  32485699 atggataacacttgtgtgacacagagttgggtgacattggtgacattgatcaatcacaatatcacaatgc 32485630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 324 - 388
Target Start/End: Complemental strand, 16971289 - 16971225
Alignment:
Q  324 tagcacttgtgtgagatagagttgagtcacattggtaacattggtcaatcacaatgttacaatgc 388  Q
    ||||||||| |||| ||||||||| || |||||||| ||||||  |||||||||||| |||||||    
T  16971289 tagcacttgggtgacatagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgc 16971225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 324 - 388
Target Start/End: Complemental strand, 29699512 - 29699448
Alignment:
Q  324 tagcacttgtgtgagatagagttgagtcacattggtaacattggtcaatcacaatgttacaatgc 388  Q
    ||||||||| |||| ||||||||| || | |||||| ||||||| |||||||||||| |||||||    
T  29699512 tagcacttgggtgacatagagttgggtgatattggtgacattggccaatcacaatgtcacaatgc 29699448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 330 - 380
Target Start/End: Complemental strand, 12913942 - 12913892
Alignment:
Q  330 ttgtgtgagatagagttgagtcacattggtaacattggtcaatcacaatgt 380  Q
    |||||||| ||||||||| || |||||||| | ||||||||||||||||||    
T  12913942 ttgtgtgacatagagttgggtgacattggtgatattggtcaatcacaatgt 12913892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 328 - 378
Target Start/End: Original strand, 19598329 - 19598379
Alignment:
Q  328 acttgtgtgagatagagttgagtcacattggtaacattggtcaatcacaat 378  Q
    ||||| |||| ||||||||| || |||||||| ||||||||||||||||||    
T  19598329 acttgggtgacatagagttgggtaacattggtgacattggtcaatcacaat 19598379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 334 - 388
Target Start/End: Complemental strand, 28819052 - 28818998
Alignment:
Q  334 gtgagatagagttgagtcacattggtaacattggtcaatcacaatgttacaatgc 388  Q
    |||| |||||||||||| | |||||| |||||||||||||| ||||| |||||||    
T  28819052 gtgacatagagttgagtgatattggtgacattggtcaatcataatgtcacaatgc 28818998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 328 - 388
Target Start/End: Original strand, 291094 - 291154
Alignment:
Q  328 acttgtgtgagatagagttgagtcacattggtaacattggtcaatcacaatgttacaatgc 388  Q
    ||||| |||| ||||||||| || |||||||| ||||||| |||||||||||  |||||||    
T  291094 acttgagtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgc 291154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 380
Target Start/End: Original strand, 2093930 - 2093986
Alignment:
Q  324 tagcacttgtgtgagatagagttgagtcacattggtaacattggtcaatcacaatgt 380  Q
    ||||||||| |||| ||||||||| || | |||||| |||||| |||||||||||||    
T  2093930 tagcacttgggtgacatagagttgggtgatattggtgacattgatcaatcacaatgt 2093986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 376
Target Start/End: Complemental strand, 2356416 - 2356364
Alignment:
Q  324 tagcacttgtgtgagatagagttgagtcacattggtaacattggtcaatcaca 376  Q
    |||||||||||||| |||||||||  | |||||||| ||||||| ||||||||    
T  2356416 tagcacttgtgtgacatagagttggatgacattggtgacattggccaatcaca 2356364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 388
Target Start/End: Complemental strand, 3899984 - 3899920
Alignment:
Q  324 tagcacttgtgtgagatagagttgagtcacattggtaacattggtcaatcacaatgttacaatgc 388  Q
    ||||||||| ||||  |||||||| || |||||||| ||||||  |||||||||||| |||||||    
T  3899984 tagcacttgggtgacttagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgc 3899920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000002; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 327 - 388
Target Start/End: Original strand, 9157306 - 9157367
Alignment:
Q  327 cacttgtgtgagatagagttgagtcacattggtaacattggtcaatcacaatgttacaatgc 388  Q
    ||||||||||| ||||||||| || |||||||||||||||  |||||||||||| |||||||    
T  9157306 cacttgtgtgacatagagttgggtgacattggtaacattgaccaatcacaatgtcacaatgc 9157367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 319 - 388
Target Start/End: Original strand, 49444901 - 49444970
Alignment:
Q  319 atggatagcacttgtgtgagatagagttgagtcacattggtaacattggtcaatcacaatgttacaatgc 388  Q
    |||| ||||||||| |||| ||||||||| || |||||||| |||| | |||||||||||||||||||||    
T  49444901 atgggtagcacttgggtgacatagagttgggtgacattggtgacatcgatcaatcacaatgttacaatgc 49444970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 324 - 388
Target Start/End: Original strand, 48993910 - 48993974
Alignment:
Q  324 tagcacttgtgtgagatagagttgagtcacattggtaacattggtcaatcacaatgttacaatgc 388  Q
    ||||||||| |||| ||||||||| || |||||||| ||||||  |||||||||||| |||||||    
T  48993910 tagcacttgggtgacatagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgc 48993974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 388
Target Start/End: Original strand, 28395645 - 28395694
Alignment:
Q  339 atagagttgagtcacattggtaacattggtcaatcacaatgttacaatgc 388  Q
    |||||||||||| |||||||| ||||||  |||||||||||| |||||||    
T  28395645 atagagttgagtgacattggtgacattgaccaatcacaatgtcacaatgc 28395694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 328 - 388
Target Start/End: Complemental strand, 29179738 - 29179678
Alignment:
Q  328 acttgtgtgagatagagttgagtcacattggtaacattggtcaatcacaatgttacaatgc 388  Q
    ||||| |||| ||||||||| || |||||||| ||||||| |||||||||||  |||||||    
T  29179738 acttgggtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgc 29179678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 388
Target Start/End: Complemental strand, 32540893 - 32540829
Alignment:
Q  324 tagcacttgtgtgagatagagttgagtcacattggtaacattggtcaatcacaatgttacaatgc 388  Q
    ||||||||| |||| ||||| |||  | |||||||| ||||||  ||||||||||||||||||||    
T  32540893 tagcacttgggtgacatagaattggatgacattggtgacattgaccaatcacaatgttacaatgc 32540829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 328 - 388
Target Start/End: Original strand, 37155043 - 37155103
Alignment:
Q  328 acttgtgtgagatagagttgagtcacattggtaacattggtcaatcacaatgttacaatgc 388  Q
    ||||| |||| ||||||||  || |||||||| ||||||| |||||||||||| |||||||    
T  37155043 acttgggtgacatagagtttggtgacattggtgacattggccaatcacaatgtcacaatgc 37155103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.000000000009; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 324 - 388
Target Start/End: Original strand, 5667090 - 5667154
Alignment:
Q  324 tagcacttgtgtgagatagagttgagtcacattggtaacattggtcaatcacaatgttacaatgc 388  Q
    ||||||||| |||| |||||||||  | |||||||| |||||||||||||||||||| |||||||    
T  5667090 tagcacttgggtgacatagagttggatgacattggtgacattggtcaatcacaatgtcacaatgc 5667154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 324 - 388
Target Start/End: Complemental strand, 5033306 - 5033242
Alignment:
Q  324 tagcacttgtgtgagatagagttgagtcacattggtaacattggtcaatcacaatgttacaatgc 388  Q
    ||||||||| |||| ||||||||| || |||||||| ||||||  |||||||||||| |||||||    
T  5033306 tagcacttgggtgacatagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgc 5033242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 320 - 380
Target Start/End: Original strand, 34229630 - 34229690
Alignment:
Q  320 tggatagcacttgtgtgagatagagttgagtcacattggtaacattggtcaatcacaatgt 380  Q
    |||||||||||||||||| ||||||||| || ||||| || ||||  ||||||||||||||    
T  34229630 tggatagcacttgtgtgacatagagttgggtgacattagtgacatgagtcaatcacaatgt 34229690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 328 - 388
Target Start/End: Complemental strand, 8243529 - 8243469
Alignment:
Q  328 acttgtgtgagatagagttgagtcacattggtaacattggtcaatcacaatgttacaatgc 388  Q
    ||||| |||| ||||||||| || |||||||| || ||||||||||||||||  |||||||    
T  8243529 acttgggtgacatagagttgggtgacattggtgacgttggtcaatcacaatgccacaatgc 8243469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 328 - 388
Target Start/End: Original strand, 22649842 - 22649902
Alignment:
Q  328 acttgtgtgagatagagttgagtcacattggtaacattggtcaatcacaatgttacaatgc 388  Q
    ||||| |||| |||||||||||| |||||||| |||||||  ||||||||||  |||||||    
T  22649842 acttgggtgacatagagttgagtgacattggtgacattggctaatcacaatgccacaatgc 22649902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 388
Target Start/End: Original strand, 35440962 - 35441026
Alignment:
Q  324 tagcacttgtgtgagatagagttgagtcacattggtaacattggtcaatcacaatgttacaatgc 388  Q
    ||||||||| ||||  |||||||| || |||||||| ||||||  |||||||||||| |||||||    
T  35440962 tagcacttgggtgacttagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgc 35441026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 328 - 388
Target Start/End: Complemental strand, 35441110 - 35441050
Alignment:
Q  328 acttgtgtgagatagagttgagtcacattggtaacattggtcaatcacaatgttacaatgc 388  Q
    ||||| |||| ||||||||| || |||||||| ||||||| |||||||||||  |||||||    
T  35441110 acttgggtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgc 35441050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.000000000009; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 324 - 388
Target Start/End: Complemental strand, 6271847 - 6271783
Alignment:
Q  324 tagcacttgtgtgagatagagttgagtcacattggtaacattggtcaatcacaatgttacaatgc 388  Q
    ||||||||| |||| |||||||||||| | |||||| ||||||| |||||||||||| |||||||    
T  6271847 tagcacttgggtgacatagagttgagtgatattggtgacattggccaatcacaatgtcacaatgc 6271783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 324 - 388
Target Start/End: Complemental strand, 42375155 - 42375091
Alignment:
Q  324 tagcacttgtgtgagatagagttgagtcacattggtaacattggtcaatcacaatgttacaatgc 388  Q
    ||||||||| |||| ||||||||| || |||||||| |||||| ||||||||||||| |||||||    
T  42375155 tagcacttgggtgacatagagttgggtgacattggtgacattgatcaatcacaatgtcacaatgc 42375091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 320 - 377
Target Start/End: Original strand, 19184492 - 19184549
Alignment:
Q  320 tggatagcacttgtgtgagatagagttgagtcacattggtaacattggtcaatcacaa 377  Q
    ||||||||| ||| ||||||||||||| ||| |||||| | |||||||||||||||||    
T  19184492 tggatagcatttgggtgagatagagttaagtgacattgatgacattggtcaatcacaa 19184549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 315 - 380
Target Start/End: Original strand, 35682150 - 35682215
Alignment:
Q  315 atatatggatagcacttgtgtgagatagagttgagtcacattggtaacattggtcaatcacaatgt 380  Q
    |||||||| ||||||||| |||| ||||||||  || | |||||| ||||||| ||||||||||||    
T  35682150 atatatgggtagcacttgggtgacatagagttaggtgatattggtgacattggccaatcacaatgt 35682215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 386
Target Start/End: Complemental strand, 44380078 - 44380013
Alignment:
Q  321 ggatagcacttgtgtgagatagagttgagtcacattggtaacattggtcaatcacaatgttacaat 386  Q
    ||||| || ||| |||| |||||||||||| |||||||| | ||||  ||||||||||||||||||    
T  44380078 ggataacatttgggtgacatagagttgagtgacattggtgatattgaccaatcacaatgttacaat 44380013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 388
Target Start/End: Complemental strand, 47661987 - 47661923
Alignment:
Q  324 tagcacttgtgtgagatagagttgagtcacattggtaacattggtcaatcacaatgttacaatgc 388  Q
    ||||| ||| |||| ||||||||| || |||||||| ||||||  |||||||||||| |||||||    
T  47661987 tagcatttgggtgacatagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgc 47661923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 328 - 388
Target Start/End: Original strand, 51265442 - 51265502
Alignment:
Q  328 acttgtgtgagatagagttgagtcacattggtaacattggtcaatcacaatgttacaatgc 388  Q
    ||||| |||| ||||||||| || |||||||| ||||||| |||||||||||  |||||||    
T  51265442 acttgggtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgc 51265502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 321 - 388
Target Start/End: Complemental strand, 7194 - 7128
Alignment:
Q  321 ggatagcacttgtgtgagatagagttgagtcacattggtaacattggtcaatcacaatgttacaatgc 388  Q
    ||||| ||||||||||| ||||||||| || |||||||| ||||||| |||||||||||| |||||||    
T  7194 ggataacacttgtgtgacatagagttg-gtgacattggtgacattggccaatcacaatgtcacaatgc 7128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 36; Significance: 0.00000000004; HSPs: 8)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 321 - 388
Target Start/End: Original strand, 33689166 - 33689233
Alignment:
Q  321 ggatagcacttgtgtgagatagagttgagtcacattggtaacattggtcaatcacaatgttacaatgc 388  Q
    ||||| ||||||||||| ||||||||| || |||||| | | |||||||||||||||||| |||||||    
T  33689166 ggataacacttgtgtgacatagagttgggtgacattgatgatattggtcaatcacaatgtcacaatgc 33689233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 322 - 388
Target Start/End: Complemental strand, 50524849 - 50524783
Alignment:
Q  322 gatagcacttgtgtgagatagagttgagtcacattggtaacattggtcaatcacaatgttacaatgc 388  Q
    |||| |||||| |||| |||||||||||| |||||||| | ||| ||||||||||||||||| ||||    
T  50524849 gataacacttgggtgacatagagttgagtgacattggtgatattagtcaatcacaatgttacgatgc 50524783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 378
Target Start/End: Original strand, 55223221 - 55223279
Alignment:
Q  320 tggatagcacttgtgtgagatagagttgagtcacattggtaacattggtcaatcacaat 378  Q
    |||||||||||||||||| ||||||||  || |||||||| | ||||||||||||||||    
T  55223221 tggatagcacttgtgtgacatagagttaggtgacattggtgatattggtcaatcacaat 55223279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 327 - 388
Target Start/End: Complemental strand, 41753106 - 41753045
Alignment:
Q  327 cacttgtgtgagatagagttgagtcacattggtaacattggtcaatcacaatgttacaatgc 388  Q
    |||||| |||| |||||||||||| |||||||| ||||||| |||||||||||  |||||||    
T  41753106 cacttgggtgacatagagttgagtgacattggtgacattggccaatcacaatgccacaatgc 41753045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 324 - 388
Target Start/End: Original strand, 45103102 - 45103166
Alignment:
Q  324 tagcacttgtgtgagatagagttgagtcacattggtaacattggtcaatcacaatgttacaatgc 388  Q
    ||||||||| |||| ||||||||| || |||||||| | |||| ||||||||||||| |||||||    
T  45103102 tagcacttgggtgacatagagttgggtgacattggtgatattgatcaatcacaatgtcacaatgc 45103166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 318 - 385
Target Start/End: Original strand, 18321638 - 18321705
Alignment:
Q  318 tatggatagcacttgtgtgagatagagttgagtcacattggtaacattggtcaatcacaatgttacaa 385  Q
    ||||||||||||||| |  | ||||||||| || | |||||| |||||||||||||||||||| ||||    
T  18321638 tatggatagcacttgggcaacatagagttgggtgatattggtgacattggtcaatcacaatgtcacaa 18321705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 327 - 388
Target Start/End: Original strand, 1801442 - 1801503
Alignment:
Q  327 cacttgtgtgagatagagttgagtcacattggtaacattggtcaatcacaatgttacaatgc 388  Q
    |||||| |||| ||||||||| || |||||||| ||||||| |||||||||||  |||||||    
T  1801442 cacttgggtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgc 1801503  T

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Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 380
Target Start/End: Complemental strand, 30734547 - 30734491
Alignment:
Q  324 tagcacttgtgtgagatagagttgagtcacattggtaacattggtcaatcacaatgt 380  Q
    ||||||||| |||| ||||||||  || |||||||| ||||||| ||||||||||||    
T  30734547 tagcacttgggtgacatagagttaggtgacattggtgacattggccaatcacaatgt 30734491  T

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Target: scaffold0180 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 316 - 388
Target Start/End: Original strand, 19107 - 19179
Alignment:
Q  316 tatatggatagcacttgtgtgagatagagttgagtcacattggtaacattggtcaatcacaatgttacaatgc 388  Q
    ||||| ||||||| |||||||| ||||||||| || |||||| | | |||| ||||||||||||| |||||||    
T  19107 tatatagatagcatttgtgtgacatagagttgggtgacattgatgatattgatcaatcacaatgtcacaatgc 19179  T

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Target: scaffold0016 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 388
Target Start/End: Original strand, 49696 - 49760
Alignment:
Q  324 tagcacttgtgtgagatagagttgagtcacattggtaacattggtcaatcacaatgttacaatgc 388  Q
    ||||||||| |||| ||||||||| || |||||| | ||||||  |||||||||||| |||||||    
T  49696 tagcacttgggtgacatagagttgggtgacattgatgacattgaccaatcacaatgtcacaatgc 49760  T

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