View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17684_high_9 (Length: 333)
Name: NF17684_high_9
Description: NF17684
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17684_high_9 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 249; Significance: 1e-138; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 30 - 333
Target Start/End: Original strand, 10194107 - 10194414
Alignment:
| Q |
30 |
atgtgttctataaccttataccagtagtacataatctggtattgcaatttgtcataaactgcatcgcatcaattgcattcactgcaacatggaacttatc |
129 |
Q |
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| T |
10194107 |
atgtgttctataaccttataccagtagtacataatctggtattgcaatttgtcataaact-----gaatcaattgcattcactgcaacatggaacttatc |
10194201 |
T |
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| Q |
130 |
aaaattttctgtccctaacaccattccaggcatcctgatatcaggatcaaggaattcgaactcatctgttactgaacatgccgcctaacagtgtttgatc |
229 |
Q |
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| T |
10194202 |
aaaattttctgtccctaacaccattccaggcatcctgatatcaggatcaaggaattcgaactcatctgttactgaacatgcagcctaacagtgtttgatc |
10194301 |
T |
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| Q |
230 |
ataaatcgcaaattataattgaca---------agaaagccctaaaccgtataagtagtgatcggatcttttgcacttcgcttgtctttcatcatattta |
320 |
Q |
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| T |
10194302 |
ataaatcgcaaattataattgacaagaaaaaccagaaaaccctaaaccgtataagtagtgatcggatcttttgcacttcgcttgtctttcatcatattta |
10194401 |
T |
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| Q |
321 |
tctttaaatgcgt |
333 |
Q |
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| T |
10194402 |
tctttaaatgcgt |
10194414 |
T |
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