View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17685_high_3 (Length: 214)
Name: NF17685_high_3
Description: NF17685
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17685_high_3 |
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Alignment Details
Target: chr8 (Bit Score: 148; Significance: 3e-78; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 7333416 - 7333217
Alignment:
| Q |
1 |
cccacacctttcatccccacaattgaaagtgtggaaggattactaccgctccctgtggtcaactttgagaccaaatctcgttcttcttttttacaaccaa |
100 |
Q |
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| T |
7333416 |
cccacacctttcatccccacaatggaaagtgcggaaggattactaccactccctgaggtcaactttgagaccaaatcttgctcttcttttttacaaccaa |
7333317 |
T |
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| Q |
101 |
ctaatttggttgactcctgtctatcaatggtgcaagtttttattaatttatcaagaagattgatagcatttcctatctgactttgatattccacaggttc |
200 |
Q |
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|||||||||||||||||||||| | |||||||||||||||||||| || | |||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
7333316 |
ctaatttggttgactcctgtcttttgatggtgcaagtttttattaaattctgaagaagattgatagcatttcctatctcactttgatattccacaggttc |
7333217 |
T |
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