View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF17686_high_1 (Length: 560)
Name: NF17686_high_1
Description: NF17686
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17686_high_1 |
 | |
|
| [»] scaffold1439 (1 HSPs) |
| | |
|
Alignment Details
Target: chr3 (Bit Score: 484; Significance: 0; HSPs: 32)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 484; E-Value: 0
Query Start/End: Original strand, 1 - 532
Target Start/End: Complemental strand, 22436840 - 22436309
Alignment:
| Q |
1 |
cgttgattgatgaagtgataaaacagttgcagcaaaaaaggtactttgtcgtgtttgacgatgtatggtactttaatatttggaatgatattgaatttgc |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| |
|
|
| T |
22436840 |
cgttgattgatgaagtgataaaacagttgcagcaaaaaaggtactttgtcgtgtttgacgatgtatggaacttaaatatttggaatgatattgaatttgc |
22436741 |
T |
|
| Q |
101 |
tatgattgataacttaaatggttctaaggtattaatcacaacaagaaacatgaatgttgcaaattcttttaagagatcttcttttgttgaagtacatgaa |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22436740 |
tatgattgataacttaaatggttctaaggtattaatcacaacaaggaaaatgaatgttgcaaattcttttaagagatcttcttttgttgaagtacatgaa |
22436641 |
T |
|
| Q |
201 |
cttaaaggtttaactgaagaaaaatctttagaattgttcaataagaaggtgttccataacttgagtggatgttgtccagaaaatcttattgatatatctt |
300 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
22436640 |
cttcaaggtttaactgaagaaaaatctttagaattgttcaataagaaggcattccataacttgagtggatgttgtccacaaaatcttattgatatatctt |
22436541 |
T |
|
| Q |
301 |
ccaaaattgttaaaaaatgcaaaggattacctctagcaattgtagtcactggtggtcttttatcttgcaaagatagaaatccgattgaatggtacaagtt |
400 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| |
|
|
| T |
22436540 |
ccaaaattgttaaaaaatgcaaaggattacctctagcaattgtagtcactggtggtcttttatcttgcaaagatagaaatcctactgaatggtacaagtt |
22436441 |
T |
|
| Q |
401 |
tagtgaaaatataaatgcagatcagtcaaatgaatattccataataagaaaaattctaggatttagttaccatgatttgccttactacctaaagtcatgt |
500 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| |
|
|
| T |
22436440 |
tagtgaaaatataaatgcagatcagtcaaatgaatattccataataagaaaaattctaggatttagttaccatgatttgccttactacctcaagtcgtgt |
22436341 |
T |
|
| Q |
501 |
ttcttgtattttggattatatcctgaagacta |
532 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
22436340 |
ttcttgtattttggattatatcctgaagacta |
22436309 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 309; E-Value: 1e-174
Query Start/End: Original strand, 35 - 531
Target Start/End: Complemental strand, 22368099 - 22367603
Alignment:
| Q |
35 |
aaaaaggtactttgtcgtgtttgacgatgtatggtactttaatatttggaatgatattgaatttgctatgattgataacttaaatggttctaaggtatta |
134 |
Q |
| |
|
|||||||||| |||| |||||||| ||||||||| ||| || |||||||||||||||||||| |||||||||||||| |||||||| |||| ||||| |
|
|
| T |
22368099 |
aaaaaggtacgttgtagtgtttgatgatgtatgggactcacatttttggaatgatattgaattttctatgattgataacaaaaatggttgtaagatatta |
22368000 |
T |
|
| Q |
135 |
atcacaacaagaaacatgaatgttgcaaattcttttaagagatcttcttttgttgaagtacatgaacttaaaggtttaactgaagaaaaatctttagaat |
234 |
Q |
| |
|
||||||||||||||| | |||||||| || ||| ||||| |||||||||||||||||| ||| ||||| ||||||||| |||||||||||||||||||| |
|
|
| T |
22367999 |
atcacaacaagaaacgaggatgttgcagatgcttgtaagaaatcttcttttgttgaagtgcataaacttgaaggtttaagtgaagaaaaatctttagaat |
22367900 |
T |
|
| Q |
235 |
tgttcaataagaaggtgttccataacttgagtggatgttgtccagaaaatcttattgatatatcttccaaaattgttaaaaaatgcaaaggattacctct |
334 |
Q |
| |
|
||||||||||||||| ||||||| ||||||| |||| |||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| || |
|
|
| T |
22367899 |
tgttcaataagaaggcgttccatgacttgagcggatattgtccagaaaatcttattgatatatcttccaaaattgttgaaaaatgcaatggattaccact |
22367800 |
T |
|
| Q |
335 |
agcaattgtagtcactggtggtcttttatcttgcaaagatagaaatccgattgaatggtacaagtttagtgaaaatataaatgcagatcagtcaaatgaa |
434 |
Q |
| |
|
||||||||||||| ||||||| ||||| ||||||||||||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
22367799 |
cgcaattgtagtcattggtggtattttagcttgcaaagataggaatccaattgaatggtctaagtttagtgaaaatataaatgcagatcagtcaaaggaa |
22367700 |
T |
|
| Q |
435 |
tattccataataagaaaaattctaggatttagttaccatgatttgccttactacctaaagtcatgtttcttgtattttggattatatcctgaagact |
531 |
Q |
| |
|
|||||||| |||| ||||||||||||| ||||||||||||||||||||| | |||| ||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
22367699 |
tattccatgataaaaaaaattctaggacttagttaccatgatttgccttgcaacctcaagtcatgtttcttgtactttggattatatcctgaagact |
22367603 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 290; E-Value: 1e-162
Query Start/End: Original strand, 35 - 532
Target Start/End: Complemental strand, 22431345 - 22430848
Alignment:
| Q |
35 |
aaaaaggtactttgtcgtgtttgacgatgtatggtactttaatatttggaatgatattgaatttgctatgattgataacttaaatggttctaaggtatta |
134 |
Q |
| |
|
|||||||||| |||| |||||||| ||||||||| | | ||| ||||| ||||||||||||||||||||||||||||| |||||||| |||| ||||| |
|
|
| T |
22431345 |
aaaaaggtacgttgtagtgtttgatgatgtatgggagtcaaatttttggtatgatattgaatttgctatgattgataacaaaaatggttgtaagatatta |
22431246 |
T |
|
| Q |
135 |
atcacaacaagaaacatgaatgttgcaaattcttttaagagatcttcttttgttgaagtacatgaacttaaaggtttaactgaagaaaaatctttagaat |
234 |
Q |
| |
|
|||||||||||||||| | ||| || | || ||| ||||| |||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
22431245 |
atcacaacaagaaacaaggatggtgtagatgcttgtaagaaatcttcttttgttgaagtgcatgaacttaaaggtttaaccgaagaaaaatctttagaat |
22431146 |
T |
|
| Q |
235 |
tgttcaataagaaggtgttccataacttgagtggatgttgtccagaaaatcttattgatatatcttccaaaattgttaaaaaatgcaaaggattacctct |
334 |
Q |
| |
|
||||||||||||| ||||||||| ||||||| |||| |||||||||||||||||| ||||||||||||||||||||| |||||||||| |||||||| || |
|
|
| T |
22431145 |
tgttcaataagaaagtgttccatgacttgagcggatattgtccagaaaatcttatagatatatcttccaaaattgttgaaaaatgcaatggattaccact |
22431046 |
T |
|
| Q |
335 |
agcaattgtagtcactggtggtcttttatcttgcaaagatagaaatccgattgaatggtacaagtttagtgaaaatataaatgcagatcagtcaaatgaa |
434 |
Q |
| |
|
||||||||||||| ||||||| ||||| ||||||||||||| ||||| |||||||||| |||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
22431045 |
cgcaattgtagtcattggtggtattttagcttgcaaagataggaatccaattgaatggtctaagtttagtgaaaatataaatgcagatcaggcaaatgaa |
22430946 |
T |
|
| Q |
435 |
tattccataataagaaaaattctaggatttagttaccatgatttgccttactacctaaagtcatgtttcttgtattttggattatatcctgaagacta |
532 |
Q |
| |
|
|| | | |||||||||| | ||||| ||||||||||||||||||||| | |||| ||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
22430945 |
aatcctgtgataagaaaaactttaggacttagttaccatgatttgccttgcaacctcaagtcatgtttcttgtattttggattatatcctaaagacta |
22430848 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 7 - 544
Target Start/End: Complemental strand, 22358202 - 22357668
Alignment:
| Q |
7 |
ttgatgaagtgataaaacagttgcagcaaaaaaggtactttgtcgtgtttgacgatgtatggtactttaatatttggaatgatattgaatttgctatgat |
106 |
Q |
| |
|
|||||||||||| ||| | ||||| |||||||||| |||| |||||||| ||||||||| | | || ||| | |||||||||||||||||||||| |
|
|
| T |
22358202 |
ttgatgaagtgagaaactacttgcaagaaaaaaggtatgttgtagtgtttgatgatgtatgggagtcacattttttgcatgatattgaatttgctatgat |
22358103 |
T |
|
| Q |
107 |
tgataacttaaatggttctaaggtattaatcacaacaagaaacatgaatgttgcaaattcttttaagagatcttcttttgttgaagtacatgaacttaaa |
206 |
Q |
| |
|
||||||| ||| ||||||| | |||||||||| |||||||||||| ||||||| ||| ||| ||||| |||||||||||||||||| ||||||| ||| |
|
|
| T |
22358102 |
tgataacaaaaagggttctaggatattaatcactacaagaaacatggatgttgcgaatacttgtaagaaatcttcttttgttgaagtgtatgaactaaaa |
22358003 |
T |
|
| Q |
207 |
ggtttaactgaagaaaaatctttagaattgttcaataagaaggtgttccataacttgagtggatgttgtccagaaaatcttattgatatatcttccaaaa |
306 |
Q |
| |
|
||||| |||| |||| ||||||| || |||||||||||||||| |||||| |||| | |||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
22358002 |
ggtttgactgtagaacaatcttttgagttgttcaataagaaggcattccatgacttaaatggacgttgtccagaaaatcttattgatatatcttccaaaa |
22357903 |
T |
|
| Q |
307 |
ttgttaaaaaatgcaaaggattacctctagcaattgtagtcactggtggtcttttatcttgcaaagatagaaatccgattgaatggtacaagtttagtga |
406 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||| ||||||| ||||| || |||||||| || ||| || |||||||| ||||||||||| |
|
|
| T |
22357902 |
ttgttaaaaaatgcaaaggattaccactagcaattgtagtcattggtggtattttagctcccaaagataaaattccaatggaatggtataagtttagtga |
22357803 |
T |
|
| Q |
407 |
aaatataaatgcagatcagtcaaatgaatattccataataagaaaaattctaggatttagttaccatgatttgccttactacctaaagtcatgtttcttg |
506 |
Q |
| |
|
||||||||||||||| || | | |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
22357802 |
aaatataaatgcaga---gttagaggaatattccataataagaaaaattttaggatttagttaccatgatttgccttactacctcaagtcatgtttcttg |
22357706 |
T |
|
| Q |
507 |
tattttggattatatcctgaagactacaaagttcattc |
544 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
22357705 |
tattttggattatatcctgaagactataaagttcattc |
22357668 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 7 - 532
Target Start/End: Complemental strand, 22442939 - 22442420
Alignment:
| Q |
7 |
ttgatgaagtgataaaacagttgcagcaaaaaaggtactttgtcgtgtttgacgatgtatggtactttaatatttggaatgatattgaatttgctatgat |
106 |
Q |
| |
|
|||||||||||| ||| | ||||| |||||||||| |||| |||||||| ||||||||| | | || ||| | |||||||||||||||||||||| |
|
|
| T |
22442939 |
ttgatgaagtgagaaactacttgcaagaaaaaaggtatgttgtagtgtttgatgatgtatgggagtcacattttttgcatgatattgaatttgctatgat |
22442840 |
T |
|
| Q |
107 |
tgataacttaaatggttctaaggtattaatcacaacaagaaacatgaatgttgcaaattcttttaagagatcttcttttgttgaagtacatgaacttaaa |
206 |
Q |
| |
|
||||||| ||| ||||||| | |||||||||| |||||||||||| ||||||||||| ||| ||||| ||||||||||||| ||| ||||| ||| |
|
|
| T |
22442839 |
tgataacaaaaagggttctaggatattaatcactacaagaaacatggatgttgcaaatacttgtaagaaatcttcttttgtt----tac--gaactaaaa |
22442746 |
T |
|
| Q |
207 |
ggtttaactgaagaaaaatctttagaattgttcaataagaaggtgttccataacttgagtggatgttgtccagaaaatcttattgatatatcttccaaaa |
306 |
Q |
| |
|
||||| |||| |||| ||||||| || |||||||||||||||| || ||| |||| | ||| |||||||| |||||||||||| |||||||||||||| |
|
|
| T |
22442745 |
ggtttgactgtagaacaatctttggagttgttcaataagaaggcatttcatgacttaaacggacgttgtccaaaaaatcttattggtatatcttccaaaa |
22442646 |
T |
|
| Q |
307 |
ttgttaaaaaatgcaaaggattacctctagcaattgtagtcactggtggtcttttatcttgcaaagatagaaatccgattgaatggtacaagtttagtga |
406 |
Q |
| |
|
||||| |||||||||| |||||||| |||||||||||||||| ||||||| ||||| || ||||||||||||| | ||||||||||| |||||| ||| |
|
|
| T |
22442645 |
ttgttgaaaaatgcaatggattaccactagcaattgtagtcattggtggtattttagctcccaaagatagaaatacaattgaatggtatgagtttaatga |
22442546 |
T |
|
| Q |
407 |
aaatataaatgcagatcagtcaaatgaatattccataataagaaaaattctaggatttagttaccatgatttgccttactacctaaagtcatgtttcttg |
506 |
Q |
| |
|
|||||||||||||||||||| || |||||||||||| ||||||||||| ||||| | ||||||||||||||||||| | |||| ||||||||||||||| |
|
|
| T |
22442545 |
aaatataaatgcagatcagtttaaggaatattccatagtaagaaaaattttaggactcagttaccatgatttgccttgcaacctcaagtcatgtttcttg |
22442446 |
T |
|
| Q |
507 |
tattttggattatatcctgaagacta |
532 |
Q |
| |
|
||||||||||||||||| |||||||| |
|
|
| T |
22442445 |
tattttggattatatcccgaagacta |
22442420 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 79 - 532
Target Start/End: Complemental strand, 22630566 - 22630119
Alignment:
| Q |
79 |
tttggaatgatattgaatttgctatgattgataacttaaatggttctaaggtattaatcacaacaagaaacatgaatgttgcaaattcttttaagagatc |
178 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||| |||||||| |||| ||||||||||||||||||||| | |||||||| || ||| ||||| ||| |
|
|
| T |
22630566 |
tttggtatgatattgaatttgctatgattgataacaaaaatggttgtaagatattaatcacaacaagaaacaaggatgttgcagatgcttgtaagaaatc |
22630467 |
T |
|
| Q |
179 |
ttcttttgttgaagtacatgaacttaaaggtttaactgaagaaaaatctttagaattgttcaataagaaggtgttccataacttgagtggatgttgtcca |
278 |
Q |
| |
|
|| ||| |||| ||||| || || ||||| |||||||| | ||||| |||||||| || ||||| | ||||||| ||||| ||||| ||||||| |
|
|
| T |
22630466 |
tt---ttggcaaagtgcatgagctggaacgtttatctgaagaacagtctttggaattgtttaaaaagaaagcgttccatgacttggatggattttgtcca |
22630370 |
T |
|
| Q |
279 |
gaaaatcttattgatatatcttccaaaattgttaaaaaatgcaaaggattacctctagcaattgtagtcactggtggtcttttatcttgcaaagatagaa |
378 |
Q |
| |
|
||||||||| |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||| | |||||||| |||||| ||||| |
|
|
| T |
22630369 |
gaaaatctttttgacatatcttccaaaattgttgaaaaatgcaaaggattacctctagcaattgtagtcaccggtgatattttatctcgcaaagttagaa |
22630270 |
T |
|
| Q |
379 |
atccgattgaatggtacaagtttagtgaaaatataaatgcagatcagtcaaatgaatattccataataagaaaaattctaggatttagttaccatgattt |
478 |
Q |
| |
|
|||| |||||||||| |||||||||||||||||||||| || ||| | | |||||||||| ||||||||||| | |||||||||||||||||||||| |
|
|
| T |
22630269 |
atccaattgaatggtctaagtttagtgaaaatataaatgtag---agttagaggaatattccacaataagaaaaaatttaggatttagttaccatgattt |
22630173 |
T |
|
| Q |
479 |
gccttactacctaaagtcatgtttcttgtattttggattatatcctgaagacta |
532 |
Q |
| |
|
|||||| |||| |||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
22630172 |
accttacaacctcaagtcatgtttcttgtattttggattctatcctgaagacta |
22630119 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 79 - 544
Target Start/End: Complemental strand, 22468076 - 22467617
Alignment:
| Q |
79 |
tttggaatgatattgaatttgctatgattgataacttaaatggttctaaggtattaatcacaacaagaaacatgaatgttgcaaattcttttaagagatc |
178 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||| |||||||| |||| ||||||||||||| ||||||| | ||||||| || ||| ||||| ||| |
|
|
| T |
22468076 |
tttggtatgatattgaatttgctatgattgataacaaaaatggttgtaagatattaatcacaacgagaaacaaggttgttgcagatgcttgtaagaaatc |
22467977 |
T |
|
| Q |
179 |
ttcttttgttgaagtacatgaacttaaaggtttaactgaagaaaaatctttagaattgttcaataagaaggtgttccataacttgagtggatgttgtcca |
278 |
Q |
| |
|
|| ||| | |||| ||||| || || ||||| |||||||| | || || |||||||| || ||||||| ||||||| ||||| ||| ||||||| |
|
|
| T |
22467976 |
tt---ttggtaaagtgcatgagctggaacgtttatctgaagaacagtccttggaattgtttaaaaagaaggcgttccatgacttggacggagtttgtcca |
22467880 |
T |
|
| Q |
279 |
gaaaatcttattgatatatcttccaaaattgttaaaaaatgcaaaggattacctctagcaattgtagtcactggtggtcttttatcttgcaaagatagaa |
378 |
Q |
| |
|
||||||||| |||| |||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| |||| | |||||||| ||||| |||||| |
|
|
| T |
22467879 |
gaaaatctttttgacatatcttccaaaattgttgaaaactgcaaaggattacctctagcaattgttgtcaccggtgatattttatctcgcaaaaatagaa |
22467780 |
T |
|
| Q |
379 |
atccgattgaatggtacaagtttagtgaaaatataaatgcagatcagtcaaatgaatattccataataagaaaaattctaggatttagttaccatgattt |
478 |
Q |
| |
|
|||| |||||||||| || ||||||||||||||||||| || ||| | | | |||||||| ||||||||||||| ||||||||||||||||| |||| |
|
|
| T |
22467779 |
atccaattgaatggtctaaatttagtgaaaatataaatgtag---agttagagggatattccacaataagaaaaattttaggatttagttaccataattt |
22467683 |
T |
|
| Q |
479 |
gccttactacctaaagtcatgtttcttgtattttggattatatcctgaagactacaaagttcattc |
544 |
Q |
| |
|
|||||| |||| ||||||||||||||||||||||||||||||||||||||||| | ||||||||| |
|
|
| T |
22467682 |
accttacaacctcaagtcatgtttcttgtattttggattatatcctgaagactatatagttcattc |
22467617 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 183; E-Value: 1e-98
Query Start/End: Original strand, 91 - 544
Target Start/End: Complemental strand, 22353926 - 22353478
Alignment:
| Q |
91 |
ttgaatttgctatgattgataacttaaatggttctaaggtattaatcacaacaagaaacatgaatgttgcaaattcttttaagagatcttcttttgttga |
190 |
Q |
| |
|
||||||||||||||||||||||| |||||||| |||| ||||||||||||||||||||| | ||||| || || || ||||| ||||| | | | | |
|
|
| T |
22353926 |
ttgaatttgctatgattgataacaaaaatggttgtaagatattaatcacaacaagaaacaaggatgttacagatgattgtaagaaatctt---tcggtaa |
22353830 |
T |
|
| Q |
191 |
agtacatgaacttaaaggtttaactgaagaaaaatctttagaattgttcaataagaaggtgttccataacttgagtggatgttgtccagaaaatcttatt |
290 |
Q |
| |
|
||| ||||| || || ||||| ||||| || ||||||| || ||||| || ||||||| ||||| | ||||| |||| ||||||| |||||||| || |
|
|
| T |
22353829 |
agtgcatgagctggaacgtttatctgaaaaacaatctttggatttgtttaaaaagaaggcgttccgtgacttggacggattttgtccaaaaaatcttttt |
22353730 |
T |
|
| Q |
291 |
gatatatcttccaaaattgttaaaaaatgcaaaggattacctctagcaattgtagtcactggtggtcttttatcttgcaaagatagaaatccgattgaat |
390 |
Q |
| |
|
||||||||||| ||||| || |||||||||||||||||||||| ||||||||||||| ||| | |||||||| |||||||||||||||| ||||||| |
|
|
| T |
22353729 |
tatatatcttccgaaattattgaaaaatgcaaaggattacctctcgcaattgtagtcataggtaatattttatctcgcaaagatagaaatccaattgaat |
22353630 |
T |
|
| Q |
391 |
ggtacaagtttagtgaaaatataaatgcagatcagtcaaatgaatattccataataagaaaaattctaggatttagttaccatgatttgcc-ttactacc |
489 |
Q |
| |
|
||| |||||||||||||||||||||||||| || | | |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| |
|
|
| T |
22353629 |
ggtctaagtttagtgaaaatataaatgcaga---gttagaggaatattccataataagaaaaattttaggatttagttaccatgatttgcctttactacc |
22353533 |
T |
|
| Q |
490 |
taaagtcatgtttcttgtattttggattatatcctgaagactacaaagttcattc |
544 |
Q |
| |
|
| ||||||||||||||||||||||||||||||| ||||||||| ||||| |||| |
|
|
| T |
22353532 |
tcaagtcatgtttcttgtattttggattatatctcgaagactacgaagtttattc |
22353478 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 160; E-Value: 5e-85
Query Start/End: Original strand, 27 - 528
Target Start/End: Complemental strand, 22458669 - 22458171
Alignment:
| Q |
27 |
ttgcagcaaaaaaggtactttgtcgtgtttgacgatgtatggtactttaatatttggaatgatattgaatttgctatgattgataacttaaatggttcta |
126 |
Q |
| |
|
|||||| |||||||||| || | || ||||| ||||||||| ||| || ||||| ||||||| ||||||||||||||||||| ||| |||| || |
|
|
| T |
22458669 |
ttgcaggaaaaaaggtatgttatagtttttgatgatgtatggagcttacatttttgggatgatatcaaatttgctatgattgataataaaaagggttgta |
22458570 |
T |
|
| Q |
127 |
aggtattaatcacaacaagaaacatgaatgttgcaaattcttttaagagatcttcttttgttgaagtacatgaacttaaaggtttaactgaagaaaaatc |
226 |
Q |
| |
|
|| ||||||||||||||||||||||| ||||||||||| | | ||||| |||||||||||||||||| ||||| | |||||||| ||||| || |||| |
|
|
| T |
22458569 |
agatattaatcacaacaagaaacatggatgttgcaaatgcatgtaagaaatcttcttttgttgaagtgtatgaaatgaaaggtttggctgaacaacaatc |
22458470 |
T |
|
| Q |
227 |
tttagaattgttcaataagaaggtgttccataacttgagtggatgttgtccagaaaatcttattgatatatcttccaaaattgttaaaaaatgcaaagga |
326 |
Q |
| |
|
||| || ||||||||||||||| ||||| |||| | ||| |||||||||||||||||||||||||||||| ||||||||| |||||||||| ||| |
|
|
| T |
22458469 |
tttggagttgttcaataagaagacattccacgacttaaacggacgttgtccagaaaatcttattgatatatcttttaaaattgttgaaaaatgcaatgga |
22458370 |
T |
|
| Q |
327 |
ttacctctagcaattgtagtcactggtggtcttttatcttgcaaagatagaaatccgattgaatggtacaagtttagtgaaaatataaatgcagatcagt |
426 |
Q |
| |
|
|| || |||||||||||| ||| ||||||| ||||||||||||||||||||||| | |||||||| ||||||||||||||| ||||| || ||| |
|
|
| T |
22458369 |
ttgccactagcaattgtactcattggtggtattttatcttgcaaagatagaaatacatcagaatggtataagtttagtgaaaatctaaatatag---agt |
22458273 |
T |
|
| Q |
427 |
caaatgaatattccataataagaaaaattctaggatttagttaccatgatttgccttactacctaaagtcatgtttcttgtattttggattatatcctga |
526 |
Q |
| |
|
||| ||| ||| | |||| ||||||| |||| | ||||||||||| || ||||| | || ||||||||||| ||||||||||||||||||||||| |
|
|
| T |
22458272 |
taaaagaagatttgaagataaaaaaaattgtaggtctcggttaccatgatctgtcttacaatctcaagtcatgtttgttgtattttggattatatcctga |
22458173 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 160; E-Value: 5e-85
Query Start/End: Original strand, 27 - 528
Target Start/End: Complemental strand, 22481650 - 22481152
Alignment:
| Q |
27 |
ttgcagcaaaaaaggtactttgtcgtgtttgacgatgtatggtactttaatatttggaatgatattgaatttgctatgattgataacttaaatggttcta |
126 |
Q |
| |
|
|||||| |||||||||| || | || ||||| ||||||||| ||| || ||||| ||||||| ||||||||||||||||||| ||| |||| || |
|
|
| T |
22481650 |
ttgcaggaaaaaaggtatgttatagtttttgatgatgtatggagcttacatttttgggatgatatcaaatttgctatgattgataataaaaagggttgta |
22481551 |
T |
|
| Q |
127 |
aggtattaatcacaacaagaaacatgaatgttgcaaattcttttaagagatcttcttttgttgaagtacatgaacttaaaggtttaactgaagaaaaatc |
226 |
Q |
| |
|
|| ||||||||||||||||||||||| ||||||||||| | | ||||| |||||||||||||||||| ||||| | |||||||| ||||| || |||| |
|
|
| T |
22481550 |
agatattaatcacaacaagaaacatggatgttgcaaatgcatgtaagaaatcttcttttgttgaagtgtatgaaatgaaaggtttggctgaacaacaatc |
22481451 |
T |
|
| Q |
227 |
tttagaattgttcaataagaaggtgttccataacttgagtggatgttgtccagaaaatcttattgatatatcttccaaaattgttaaaaaatgcaaagga |
326 |
Q |
| |
|
||| || ||||||||||||||| ||||| |||| | ||| |||||||||||||||||||||||||||||| ||||||||| |||||||||| ||| |
|
|
| T |
22481450 |
tttggagttgttcaataagaagacattccacgacttaaacggacgttgtccagaaaatcttattgatatatcttttaaaattgttgaaaaatgcaatgga |
22481351 |
T |
|
| Q |
327 |
ttacctctagcaattgtagtcactggtggtcttttatcttgcaaagatagaaatccgattgaatggtacaagtttagtgaaaatataaatgcagatcagt |
426 |
Q |
| |
|
|| || |||||||||||| ||| ||||||| ||||||||||||||||||||||| | |||||||| ||||||||||||||| ||||| || ||| |
|
|
| T |
22481350 |
ttgccactagcaattgtactcattggtggtattttatcttgcaaagatagaaatacatcagaatggtataagtttagtgaaaatctaaatatag---agt |
22481254 |
T |
|
| Q |
427 |
caaatgaatattccataataagaaaaattctaggatttagttaccatgatttgccttactacctaaagtcatgtttcttgtattttggattatatcctga |
526 |
Q |
| |
|
||| ||| ||| | |||| ||||||| |||| | ||||||||||| || ||||| | || ||||||||||| ||||||||||||||||||||||| |
|
|
| T |
22481253 |
taaaagaagatttgaagataaaaaaaattgtaggtctcggttaccatgatctgtcttacaatctcaagtcatgtttgttgtattttggattatatcctga |
22481154 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 86 - 532
Target Start/End: Complemental strand, 22635624 - 22635184
Alignment:
| Q |
86 |
tgatattgaatttgctatgattgataacttaaatggttctaaggtattaatcacaacaagaaacatgaatgttgcaaattcttttaagagatcttctttt |
185 |
Q |
| |
|
|||||||||||||||||||||||||||| |||| ||| || | ||||||||||||||||||| | | ||||||||||| ||| ||| | ||||| || |
|
|
| T |
22635624 |
tgatattgaatttgctatgattgataacaaaaatagttgtaggatattaatcacaacaagaaaaaaggatgttgcaaatgcttgtaataaatctt---tt |
22635528 |
T |
|
| Q |
186 |
gttgaagtacatgaacttaaaggtttaactgaagaaaaatctttagaattgttcaataagaaggtgttccataacttgagtggatgttgtccagaaaatc |
285 |
Q |
| |
|
| | |||| ||| | || || ||||| ||||| || ||||||| |||||||| ||||||| | ||||| |||| || || ||| ||| ||| |
|
|
| T |
22635527 |
ggtaaagtgcataatctggaacgtttatctgaaaaacaatctttggaattgtttctaaagaaggcgctccatggcttggacggcatttttcctgaatatc |
22635428 |
T |
|
| Q |
286 |
ttattgatatatcttccaaaattgttaaaaaatgcaaaggattacctctagcaattgtagtcactggtggtcttttatcttgcaaagatagaaatccgat |
385 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| | || ||||| ||| ||||||||| | || |
|
|
| T |
22635427 |
ttattgatatatcttccaaaattgtcgaaaaatgcaaaggattacctctagcaattgtagtcattggtgatattctatctcgcacggatagaaattcaat |
22635328 |
T |
|
| Q |
386 |
tgaatggtacaagtttagtgaaaatataaatgcagatcagtcaaatgaatattccataataagaaaaattctaggatttagttaccatgatttgccttac |
485 |
Q |
| |
|
||||||| |||||||||||||||||||||||||| || | | ||||||||||| |||||||||||| ||||| ||||||||||||||||||| | | |
|
|
| T |
22635327 |
agaatggtcgaagtttagtgaaaatataaatgcaga---gttagaggaatattccatgataagaaaaattttaggacttagttaccatgatttgccatgc |
22635231 |
T |
|
| Q |
486 |
tacctaaagtcatgtttcttgtattttggattatatcctgaagacta |
532 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22635230 |
tacctcaagtcatgtttcttgtattttggattatatcctgaagacta |
22635184 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 125 - 365
Target Start/End: Complemental strand, 22620996 - 22620753
Alignment:
| Q |
125 |
taaggtattaatcacaacaagaaacatgaatgttgcaaattcttttaagagatcttcttttgttgaagtacatgaacttaaaggtttaactgaagaaaaa |
224 |
Q |
| |
|
|||| |||| || |||||||||| ||| ||||||| | || || ||| | |||||||||| |||| || |||||||| || ||||||||| ||| || |
|
|
| T |
22620996 |
taagatattgattacaacaagaagtatggatgttgctatttattgtaaaaaatcttcttttattgaggtgcatgaactacaacctttaactgaggaacaa |
22620897 |
T |
|
| Q |
225 |
tctttagaattgttcaataagaaggtgttcca---taacttgagtggatgttgtccagaaaatcttattgatatatcttccaaaattgttaaaaaatgca |
321 |
Q |
| |
|
||||| || ||||||||||||||||| || | | |||| |||| |||||||| || |||| ||||||||||||||| |||||| || |||||||| |
|
|
| T |
22620896 |
tcttttgagttgttcaataagaaggtatttcgatttgactttgatggaagttgtccaaaagatctaattgatatatcttccgaaattgctagaaaatgca |
22620797 |
T |
|
| Q |
322 |
aaggattacctctagcaattgtagtcactggtggtcttttatct |
365 |
Q |
| |
|
| || ||||| ||||||||||||| | |||||||||||||||| |
|
|
| T |
22620796 |
agggtttaccactagcaattgtagccgttggtggtcttttatct |
22620753 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 27 - 366
Target Start/End: Complemental strand, 22615448 - 22615109
Alignment:
| Q |
27 |
ttgcagcaaaaaaggtactttgtcgtgtttgacgatgtatggtactttaatatttggaatgatattgaatttgctatgattgataacttaaatggttcta |
126 |
Q |
| |
|
||||||||||| |||||| |||| |||||||| ||||||||| || | || |||||||||| ||||||| |||| | |||||||| |||||| || |
|
|
| T |
22615448 |
ttgcagcaaaagaggtacgttgttgtgtttgatgatgtatggaacatgcatttttggaatgagattgaatctgctgtaattgataataaaaatggaagta |
22615349 |
T |
|
| Q |
127 |
aggtattaatcacaacaagaaacatgaatgttgcaaattcttttaagagatcttcttttgttgaagtacatgaacttaaaggtttaactgaagaaaaatc |
226 |
Q |
| |
|
|| |||| || |||||||| || || |||||||| ||||| |||||||||||| || || |||| ||||| | || ||||||||||||| |||| |
|
|
| T |
22615348 |
agatatttataacaacaaggaatatagatgttgcactttcttgtaagagatcttcgttagtcaaagtgcatgagttgcaacctttaactgaagaacaatc |
22615249 |
T |
|
| Q |
227 |
tttagaattgttcaataagaaggtgttccataacttg--agtggatgttgtccagaaaatcttattgatatatcttccaaaattgttaaaaaatgcaaag |
324 |
Q |
| |
|
| | || ||||| |||||||||| || | || ||| | | ||||||||| || | || ||||||||||||| | ||||||||||||||||||| |
|
|
| T |
22615248 |
tctggagttgtttaataagaaggcatttc--aatttgacaaatgttgttgtccaaaagagctcattgatatatcttatgatattgttaaaaaatgcaaag |
22615151 |
T |
|
| Q |
325 |
gattacctctagcaattgtagtcactggtggtcttttatctt |
366 |
Q |
| |
|
| ||||| ||||||||||| | || || ||||||||||||| |
|
|
| T |
22615150 |
gtttaccactagcaattgttgccatcggaggtcttttatctt |
22615109 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 125 - 343
Target Start/End: Complemental strand, 22657148 - 22656927
Alignment:
| Q |
125 |
taaggtattaatcacaacaagaaacatgaatgttgcaaattcttttaagagatcttcttttgttgaagtacatgaacttaaaggtttaactgaagaaaaa |
224 |
Q |
| |
|
|||| |||| || ||||||||||| ||| ||||||| | || ||||| |||||||||| ||||||| |||||||| | |||||| | |||| || |
|
|
| T |
22657148 |
taagatatttattacaacaagaaatatggatgttgcggtgtattgtaagaaatcttcttttattgaagtgcatgaactacatcctttaacagtagaacaa |
22657049 |
T |
|
| Q |
225 |
tctttagaattgttcaataagaaggtgttcca---taacttgagtggatgttgtccagaaaatcttattgatatatcttccaaaattgttaaaaaatgca |
321 |
Q |
| |
|
||||| || ||||| |||||||||| || || | |||| | ||||||||||||| || | || ||||||||||||||| |||||| || |||||||| |
|
|
| T |
22657048 |
tcttttgagttgtttaataagaaggcctttcaatttgactttaatggatgttgtccaaaagagctcattgatatatcttccgaaattgctagaaaatgca |
22656949 |
T |
|
| Q |
322 |
aaggattacctctagcaattgt |
343 |
Q |
| |
|
|||| ||||| || |||||||| |
|
|
| T |
22656948 |
aaggtttaccgctggcaattgt |
22656927 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 8 - 159
Target Start/End: Original strand, 22115352 - 22115503
Alignment:
| Q |
8 |
tgatgaagtgataaaacagttgcagcaaaaaaggtactttgtcgtgtttgacgatgtatggtactttaatatttggaatgatattgaatttgctatgatt |
107 |
Q |
| |
|
||||||||||| |||| | |||||| |||| |||||| ||||||||||||| ||||| ||| | | || ||||| |||||||||||||| || | ||| |
|
|
| T |
22115352 |
tgatgaagtgagaaaatacttgcagaaaaagaggtacgttgtcgtgtttgatgatgtttggaatgtacatttttgggatgatattgaattttctgtaatt |
22115451 |
T |
|
| Q |
108 |
gataacttaaatggttctaaggtattaatcacaacaagaaacatgaatgttg |
159 |
Q |
| |
|
|||| |||||| |||| |||| || ||||||||||||||| |||||| |
|
|
| T |
22115452 |
gatagtaaaaatggaagtaagatatttataacaacaagaaacatggatgttg |
22115503 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 472 - 523
Target Start/End: Original strand, 22180157 - 22180208
Alignment:
| Q |
472 |
atgatttgccttactacctaaagtcatgtttcttgtattttggattatatcc |
523 |
Q |
| |
|
|||||||||||||||| || ||||||||||| |||||||||||| ||||||| |
|
|
| T |
22180157 |
atgatttgccttactatctcaagtcatgtttgttgtattttggagtatatcc |
22180208 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 472 - 529
Target Start/End: Original strand, 21931161 - 21931218
Alignment:
| Q |
472 |
atgatttgccttactacctaaagtcatgtttcttgtattttggattatatcctgaaga |
529 |
Q |
| |
|
|||||||||||||||| || ||| |||| ||||||||||||||| ||||||| ||||| |
|
|
| T |
21931161 |
atgatttgccttactatctcaagccatgcttcttgtattttggagtatatccagaaga |
21931218 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 472 - 529
Target Start/End: Original strand, 21937893 - 21937950
Alignment:
| Q |
472 |
atgatttgccttactacctaaagtcatgtttcttgtattttggattatatcctgaaga |
529 |
Q |
| |
|
|||||||||||||||| || |||||||| || |||||||||||| ||||||| ||||| |
|
|
| T |
21937893 |
atgatttgccttactatctcaagtcatgcttgttgtattttggagtatatccagaaga |
21937950 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 472 - 529
Target Start/End: Original strand, 22115825 - 22115882
Alignment:
| Q |
472 |
atgatttgccttactacctaaagtcatgtttcttgtattttggattatatcctgaaga |
529 |
Q |
| |
|
|||||||||||||||| || ||||||||||| |||||||||||| |||| || ||||| |
|
|
| T |
22115825 |
atgatttgccttactatctcaagtcatgtttgttgtattttggagtatacccagaaga |
22115882 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 472 - 532
Target Start/End: Complemental strand, 22614997 - 22614937
Alignment:
| Q |
472 |
atgatttgccttactacctaaagtcatgtttcttgtattttggattatatcctgaagacta |
532 |
Q |
| |
|
|||||||||||||||| || | |||||||| ||||||||||||||||| || |||||||| |
|
|
| T |
22614997 |
atgatttgccttactatcttagatcatgtttgttgtattttggattatacccagaagacta |
22614937 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 465 - 529
Target Start/End: Complemental strand, 30989038 - 30988974
Alignment:
| Q |
465 |
agttaccatgatttgccttactacctaaagtcatgtttcttgtattttggattatatcctgaaga |
529 |
Q |
| |
|
|||||| ||||||||||||||| || |||||||| || |||||||||||| ||||||| ||||| |
|
|
| T |
30989038 |
agttacgatgatttgccttactctctcaagtcatgcttgttgtattttggaatatatccagaaga |
30988974 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 304 - 365
Target Start/End: Original strand, 21930987 - 21931048
Alignment:
| Q |
304 |
aaattgttaaaaaatgcaaaggattacctctagcaattgtagtcactggtggtcttttatct |
365 |
Q |
| |
|
||||||||||||||||||| || ||||| ||||||||||| | || ||||| ||||||||| |
|
|
| T |
21930987 |
aaattgttaaaaaatgcaatggtttaccgctagcaattgttgccatcggtggacttttatct |
21931048 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 472 - 529
Target Start/End: Original strand, 22028740 - 22028797
Alignment:
| Q |
472 |
atgatttgccttactacctaaagtcatgtttcttgtattttggattatatcctgaaga |
529 |
Q |
| |
|
|||||||||||||||| || ||| |||| || |||||||||||| ||||||| ||||| |
|
|
| T |
22028740 |
atgatttgccttactatctcaagccatgcttgttgtattttggagtatatccagaaga |
22028797 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 472 - 529
Target Start/End: Original strand, 22035257 - 22035314
Alignment:
| Q |
472 |
atgatttgccttactacctaaagtcatgtttcttgtattttggattatatcctgaaga |
529 |
Q |
| |
|
|||||||||||||||| || ||| |||| || |||||||||||| ||||||| ||||| |
|
|
| T |
22035257 |
atgatttgccttactatctcaagccatgcttgttgtattttggagtatatccagaaga |
22035314 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 472 - 529
Target Start/End: Original strand, 22053446 - 22053503
Alignment:
| Q |
472 |
atgatttgccttactacctaaagtcatgtttcttgtattttggattatatcctgaaga |
529 |
Q |
| |
|
|||||||||||||||| || ||||||| || |||||||||||| ||||||| ||||| |
|
|
| T |
22053446 |
atgatttgccttactatctcgagtcatgcttgttgtattttggagtatatccagaaga |
22053503 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 472 - 529
Target Start/End: Original strand, 22105448 - 22105505
Alignment:
| Q |
472 |
atgatttgccttactacctaaagtcatgtttcttgtattttggattatatcctgaaga |
529 |
Q |
| |
|
|||||||||||||||| || |||||||| || ||||| |||||| ||||||| ||||| |
|
|
| T |
22105448 |
atgatttgccttactatctcaagtcatgcttgttgtactttggagtatatccagaaga |
22105505 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 304 - 365
Target Start/End: Original strand, 22115651 - 22115712
Alignment:
| Q |
304 |
aaattgttaaaaaatgcaaaggattacctctagcaattgtagtcactggtggtcttttatct |
365 |
Q |
| |
|
||||||||||||||||||| || ||||| ||||||||||| | || ||||| ||||||||| |
|
|
| T |
22115651 |
aaattgttaaaaaatgcaagggtttaccgctagcaattgttgccatcggtggacttttatct |
22115712 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 304 - 365
Target Start/End: Original strand, 22179983 - 22180044
Alignment:
| Q |
304 |
aaattgttaaaaaatgcaaaggattacctctagcaattgtagtcactggtggtcttttatct |
365 |
Q |
| |
|
||||||||||||||||||| || ||||| ||||||||||| | || ||||| ||||||||| |
|
|
| T |
22179983 |
aaattgttaaaaaatgcaatggtttaccgctagcaattgttgccatcggtggacttttatct |
22180044 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 472 - 529
Target Start/End: Original strand, 22187728 - 22187785
Alignment:
| Q |
472 |
atgatttgccttactacctaaagtcatgtttcttgtattttggattatatcctgaaga |
529 |
Q |
| |
|
|||||||||||||||| || ||| |||| || |||||||||||| ||||||| ||||| |
|
|
| T |
22187728 |
atgatttgccttactatctcaagccatgcttgttgtattttggagtatatccagaaga |
22187785 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 495 - 544
Target Start/End: Complemental strand, 22620599 - 22620550
Alignment:
| Q |
495 |
tcatgtttcttgtattttggattatatcctgaagactacaaagttcattc |
544 |
Q |
| |
|
|||||||| |||||||||||||||||||| ||||| || |||||| |||| |
|
|
| T |
22620599 |
tcatgtttattgtattttggattatatccagaagattataaagttgattc |
22620550 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 444 - 529
Target Start/End: Complemental strand, 22647938 - 22647853
Alignment:
| Q |
444 |
ataagaaaaattctaggatttagttaccatgatttgccttactacctaaagtcatgtttcttgtattttggattatatcctgaaga |
529 |
Q |
| |
|
||||| |||||| ||||||| || ||| |||||||||||| ||| || || |||||||||| ||||||||| | ||||| ||||| |
|
|
| T |
22647938 |
ataagcaaaattttaggattcagctacaatgatttgcctttctatcttaaaccatgtttcttatattttggaatgtatcccgaaga |
22647853 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 472 - 529
Target Start/End: Complemental strand, 22656792 - 22656735
Alignment:
| Q |
472 |
atgatttgccttactacctaaagtcatgtttcttgtattttggattatatcctgaaga |
529 |
Q |
| |
|
|||||||||||| || || ||||||||||| |||||||||||| ||||||| ||||| |
|
|
| T |
22656792 |
atgatttgcctttttatcttaagtcatgtttgttgtattttggaatatatccagaaga |
22656735 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1439 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold1439
Description:
Target: scaffold1439; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 170 - 249
Target Start/End: Complemental strand, 1630 - 1551
Alignment:
| Q |
170 |
taagagatcttcttttgttgaagtacatgaacttaaaggtttaactgaagaaaaatctttagaattgttcaataagaagg |
249 |
Q |
| |
|
||||| |||||||||| ||||||| |||||||| || |||||||||||||||||| || || ||||| |||||||||| |
|
|
| T |
1630 |
taagaaatcttcttttattgaagtgcatgaactacaacctttaactgaagaaaaatcatttgatttgtttaataagaagg |
1551 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 29610765 - 29610701
Alignment:
| Q |
9 |
gatgaagtgataaaacagttgcagcaaaaaaggtactttgtcgtgtttgacgatgtatggtactt |
73 |
Q |
| |
|
|||||||||| ||| | |||||| | ||||||||| |||| |||||||||||||||||| |||| |
|
|
| T |
29610765 |
gatgaagtgagaaattacttgcaggagaaaaggtaccttgtagtgtttgacgatgtatggaactt |
29610701 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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