View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17687_high_17 (Length: 227)

Name: NF17687_high_17
Description: NF17687
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17687_high_17
NF17687_high_17
[»] chr1 (36 HSPs)
chr1 (30-85)||(39711074-39711129)
chr1 (30-85)||(18462286-18462342)
chr1 (30-85)||(17606628-17606684)
chr1 (30-85)||(20995698-20995754)
chr1 (30-85)||(24467629-24467685)
chr1 (30-85)||(39711394-39711450)
chr1 (30-85)||(39826368-39826424)
chr1 (30-82)||(17606307-17606360)
chr1 (33-85)||(33628690-33628743)
chr1 (30-85)||(18342339-18342395)
chr1 (30-85)||(29696565-29696621)
chr1 (30-85)||(33629012-33629068)
chr1 (30-85)||(39970968-39971024)
chr1 (32-85)||(34749138-34749192)
chr1 (36-85)||(52058011-52058061)
chr1 (30-85)||(4906962-4907018)
chr1 (30-85)||(8292804-8292860)
chr1 (30-85)||(24467949-24468002)
chr1 (30-85)||(29696879-29696935)
chr1 (30-85)||(39826050-39826106)
chr1 (34-85)||(48072287-48072339)
chr1 (30-85)||(52058330-52058386)
chr1 (30-65)||(4907284-4907319)
chr1 (35-85)||(13230059-13230110)
chr1 (30-65)||(17500790-17500825)
chr1 (32-63)||(17502053-17502084)
chr1 (30-65)||(42510036-42510071)
chr1 (34-65)||(42510341-42510372)
chr1 (32-65)||(37236739-37236772)
chr1 (30-74)||(43539669-43539714)
chr1 (30-85)||(8293130-8293186)
chr1 (34-85)||(27039638-27039690)
chr1 (34-85)||(30299232-30299284)
chr1 (30-85)||(30299553-30299609)
chr1 (34-85)||(34749431-34749483)
chr1 (30-85)||(43400753-43400809)
[»] chr8 (26 HSPs)
chr8 (30-85)||(5554869-5554925)
chr8 (30-85)||(10108370-10108426)
chr8 (30-85)||(43851665-43851721)
chr8 (30-85)||(10171465-10171521)
chr8 (30-85)||(14820295-14820351)
chr8 (34-85)||(18044153-18044205)
chr8 (30-85)||(21148258-21148314)
chr8 (34-85)||(7689849-7689901)
chr8 (30-85)||(10108692-10108748)
chr8 (30-85)||(14820616-14820672)
chr8 (30-85)||(17622890-17622946)
chr8 (30-85)||(21147936-21147992)
chr8 (30-85)||(26136685-26136741)
chr8 (30-85)||(30789829-30789885)
chr8 (30-85)||(42113303-42113359)
chr8 (30-85)||(43481637-43481693)
chr8 (30-74)||(30789519-30789564)
chr8 (30-74)||(42112996-42113041)
chr8 (34-85)||(7689524-7689576)
chr8 (30-85)||(35367410-35367466)
chr8 (32-85)||(20877069-20877123)
chr8 (30-74)||(5555191-5555236)
chr8 (30-63)||(40487736-40487769)
chr8 (30-85)||(2583643-2583699)
chr8 (30-85)||(14767826-14767882)
chr8 (30-62)||(21144598-21144630)
[»] chr7 (34 HSPs)
chr7 (30-85)||(23704982-23705038)
chr7 (30-85)||(28218178-28218234)
chr7 (30-85)||(28218485-28218541)
chr7 (30-85)||(12006541-12006597)
chr7 (30-85)||(20419536-20419592)
chr7 (30-85)||(20458692-20458748)
chr7 (30-85)||(20963815-20963871)
chr7 (30-85)||(41600280-41600336)
chr7 (30-85)||(48672601-48672657)
chr7 (32-85)||(23383499-23383553)
chr7 (30-85)||(6465855-6465911)
chr7 (30-85)||(10409695-10409751)
chr7 (30-85)||(12006862-12006918)
chr7 (30-85)||(16995200-16995256)
chr7 (30-85)||(20419859-20419915)
chr7 (38-85)||(23704662-23704710)
chr7 (35-85)||(38880048-38880099)
chr7 (30-82)||(7657972-7658025)
chr7 (34-85)||(24195198-24195250)
chr7 (34-85)||(33162862-33162914)
chr7 (30-85)||(38879723-38879779)
chr7 (34-85)||(41599958-41600010)
chr7 (30-85)||(48672277-48672333)
chr7 (30-84)||(7658287-7658342)
chr7 (30-65)||(14646972-14647007)
chr7 (31-85)||(23383823-23383878)
chr7 (40-85)||(20459022-20459068)
chr7 (30-64)||(23258246-23258280)
chr7 (36-85)||(25772364-25772414)
chr7 (30-74)||(1250528-1250573)
chr7 (30-63)||(14630359-14630392)
chr7 (30-66)||(14800978-14801014)
chr7 (30-66)||(15247970-15248006)
chr7 (30-85)||(25772653-25772709)
[»] chr6 (17 HSPs)
chr6 (30-85)||(9481182-9481238)
chr6 (30-85)||(24731935-24731991)
chr6 (30-85)||(32017825-32017881)
chr6 (31-81)||(10321737-10321788)
chr6 (30-82)||(26385596-26385649)
chr6 (30-85)||(2299635-2299691)
chr6 (30-85)||(18500315-18500371)
chr6 (34-85)||(18500655-18500707)
chr6 (34-85)||(26385278-26385330)
chr6 (30-63)||(2299363-2299396)
chr6 (38-82)||(33714486-33714531)
chr6 (34-84)||(19284130-19284181)
chr6 (30-65)||(21069535-21069570)
chr6 (36-82)||(30458903-30458950)
chr6 (30-63)||(3230184-3230217)
chr6 (45-85)||(24732274-24732315)
chr6 (34-85)||(30617967-30618019)
[»] chr5 (29 HSPs)
chr5 (30-85)||(14143902-14143958)
chr5 (30-85)||(14411697-14411753)
chr5 (30-85)||(23979223-23979279)
chr5 (30-84)||(993751-993806)
chr5 (30-85)||(6817123-6817179)
chr5 (30-85)||(17762283-17762339)
chr5 (30-85)||(24074303-24074359)
chr5 (34-85)||(24651025-24651077)
chr5 (30-85)||(24837169-24837225)
chr5 (30-85)||(24837491-24837547)
chr5 (30-85)||(17762604-17762660)
chr5 (30-85)||(18336778-18336833)
chr5 (30-85)||(31799640-31799696)
chr5 (30-84)||(4919311-4919366)
chr5 (30-80)||(7125923-7125974)
chr5 (35-85)||(7126244-7126295)
chr5 (34-84)||(41001678-41001729)
chr5 (30-85)||(4918989-4919045)
chr5 (30-85)||(14144223-14144279)
chr5 (30-85)||(18336467-18336523)
chr5 (34-81)||(31799965-31800013)
chr5 (34-80)||(27159280-27159327)
chr5 (30-65)||(41001377-41001412)
chr5 (30-63)||(22571100-22571133)
chr5 (34-74)||(29445131-29445172)
chr5 (30-85)||(14411987-14412043)
chr5 (30-85)||(20709533-20709589)
chr5 (30-85)||(30512288-30512344)
chr5 (30-85)||(30552628-30552684)
[»] chr4 (39 HSPs)
chr4 (30-85)||(31218303-31218359)
chr4 (32-85)||(3273943-3273996)
chr4 (30-85)||(9397020-9397076)
chr4 (31-85)||(41946965-41947020)
chr4 (33-82)||(3018014-3018064)
chr4 (30-83)||(9618982-9619036)
chr4 (30-85)||(9619301-9619357)
chr4 (30-85)||(31943950-31944005)
chr4 (30-85)||(31944272-31944328)
chr4 (30-85)||(37013028-37013084)
chr4 (30-85)||(46046430-46046486)
chr4 (30-85)||(46046746-46046801)
chr4 (30-85)||(48259823-48259879)
chr4 (34-84)||(9516611-9516662)
chr4 (30-84)||(35376164-35376219)
chr4 (33-85)||(3273621-3273674)
chr4 (30-74)||(15640727-15640772)
chr4 (30-82)||(38574290-38574343)
chr4 (30-85)||(9516932-9516988)
chr4 (30-85)||(26252559-26252615)
chr4 (30-85)||(31090383-31090439)
chr4 (30-85)||(38573969-38574025)
chr4 (34-85)||(41947180-41947232)
chr4 (38-84)||(15641046-15641093)
chr4 (30-84)||(34063983-34064038)
chr4 (38-80)||(48580196-48580239)
chr4 (30-64)||(43313533-43313567)
chr4 (30-64)||(53896468-53896502)
chr4 (30-74)||(3018332-3018377)
chr4 (30-82)||(9396702-9396755)
chr4 (30-82)||(13131943-13131996)
chr4 (30-74)||(35376449-35376494)
chr4 (35-82)||(7819018-7819066)
chr4 (30-85)||(12904747-12904803)
chr4 (30-85)||(12904906-12904962)
chr4 (34-85)||(13132265-13132317)
chr4 (38-85)||(18667620-18667668)
chr4 (30-85)||(31090060-31090116)
chr4 (30-85)||(36887680-36887736)
[»] chr3 (44 HSPs)
chr3 (30-85)||(9266975-9267031)
chr3 (30-85)||(14171908-14171964)
chr3 (30-85)||(14262358-14262414)
chr3 (30-85)||(19112764-19112820)
chr3 (30-85)||(35995678-35995734)
chr3 (30-85)||(35995997-35996053)
chr3 (30-85)||(43572389-43572445)
chr3 (30-85)||(9267296-9267352)
chr3 (30-85)||(16721991-16722047)
chr3 (30-85)||(19720333-19720389)
chr3 (30-85)||(27946187-27946243)
chr3 (30-85)||(30500362-30500418)
chr3 (30-85)||(45969915-45969971)
chr3 (30-84)||(52553010-52553065)
chr3 (30-85)||(5800605-5800661)
chr3 (30-85)||(11003732-11003788)
chr3 (30-85)||(14162192-14162248)
chr3 (30-85)||(16722313-16722369)
chr3 (30-85)||(19113087-19113143)
chr3 (30-85)||(45970238-45970294)
chr3 (30-85)||(49986527-49986583)
chr3 (30-80)||(27946114-27946165)
chr3 (34-74)||(14262047-14262088)
chr3 (33-65)||(3425973-3426005)
chr3 (30-85)||(5800927-5800982)
chr3 (38-85)||(20853695-20853743)
chr3 (34-85)||(20854021-20854073)
chr3 (30-85)||(30500043-30500099)
chr3 (30-85)||(33372406-33372462)
chr3 (33-65)||(35740838-35740870)
chr3 (30-85)||(45003817-45003873)
chr3 (30-85)||(49986850-49986906)
chr3 (30-65)||(35741906-35741941)
chr3 (30-65)||(36990981-36991016)
chr3 (30-65)||(37016421-37016456)
chr3 (36-85)||(14161871-14161921)
chr3 (31-65)||(24490242-24490276)
chr3 (30-85)||(3424774-3424830)
chr3 (38-85)||(14171587-14171635)
chr3 (30-85)||(15328463-15328519)
chr3 (38-85)||(17465697-17465745)
chr3 (31-82)||(17649332-17649384)
chr3 (30-66)||(32997227-32997263)
chr3 (30-85)||(33372726-33372782)
[»] scaffold0449 (2 HSPs)
scaffold0449 (30-85)||(7522-7578)
scaffold0449 (30-84)||(7227-7282)
[»] scaffold0361 (2 HSPs)
scaffold0361 (30-85)||(4562-4618)
scaffold0361 (30-85)||(4884-4940)
[»] scaffold0185 (1 HSPs)
scaffold0185 (30-85)||(3869-3925)
[»] chr2 (36 HSPs)
chr2 (30-85)||(17463413-17463469)
chr2 (30-85)||(19251791-19251847)
chr2 (30-85)||(22263515-22263571)
chr2 (30-85)||(39878395-39878450)
chr2 (32-85)||(17850587-17850641)
chr2 (30-85)||(17850908-17850964)
chr2 (30-85)||(19251471-19251527)
chr2 (30-85)||(20498747-20498803)
chr2 (30-85)||(23806274-23806330)
chr2 (30-85)||(23854688-23854744)
chr2 (30-85)||(26236127-26236183)
chr2 (34-85)||(26236420-26236472)
chr2 (33-84)||(26560880-26560932)
chr2 (30-85)||(42670717-42670773)
chr2 (39-85)||(23855025-23855072)
chr2 (30-75)||(26135827-26135873)
chr2 (32-65)||(12419046-12419079)
chr2 (32-65)||(12431106-12431139)
chr2 (30-74)||(13254758-13254803)
chr2 (30-63)||(39878125-39878158)
chr2 (30-85)||(15106387-15106443)
chr2 (30-85)||(17463092-17463148)
chr2 (34-85)||(26136143-26136195)
chr2 (30-85)||(34548574-34548630)
chr2 (30-65)||(13284735-13284770)
chr2 (39-85)||(23046707-23046754)
chr2 (30-65)||(30958705-30958740)
chr2 (34-65)||(30959997-30960028)
chr2 (30-65)||(33290070-33290105)
chr2 (34-80)||(44999435-44999481)
chr2 (30-74)||(30390470-30390515)
chr2 (30-85)||(13254497-13254553)
chr2 (30-85)||(15106067-15106123)
chr2 (30-85)||(23047904-23047960)
chr2 (30-85)||(42671041-42671097)
chr2 (40-83)||(44999354-44999398)
[»] scaffold0141 (2 HSPs)
scaffold0141 (33-85)||(8325-8378)
scaffold0141 (32-66)||(8646-8680)
[»] scaffold0117 (1 HSPs)
scaffold0117 (32-80)||(12306-12355)
[»] scaffold0176 (1 HSPs)
scaffold0176 (30-85)||(15950-16006)
[»] scaffold0809 (1 HSPs)
scaffold0809 (32-85)||(1730-1784)
[»] scaffold0477 (2 HSPs)
scaffold0477 (34-85)||(4880-4932)
scaffold0477 (34-73)||(5073-5113)
[»] scaffold0352 (2 HSPs)
scaffold0352 (30-85)||(6001-6057)
scaffold0352 (32-85)||(4667-4721)


Alignment Details
Target: chr1 (Bit Score: 48; Significance: 1e-18; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 39711129 - 39711074
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattacaggacgaaaagatgtatttaccc 85  Q
    |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||    
T  39711129 acagggactaaaaccggaattcgctaatattacaagacgaaaagaggtatttaccc 39711074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 18462342 - 18462286
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  18462342 acagggactaaaaccggaattcgctaatattacagggacgaaaagaggtatttaccc 18462286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 17606628 - 17606684
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||    
T  17606628 acagggactaaaaccggaattcgctaatattacagggacgaaaagaggtattaaccc 17606684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 20995754 - 20995698
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattacag-gacgaaaagatgtatttaccc 85  Q
    ||||||||||||||||||||||||||||||||||| || ||||||| ||||||||||    
T  20995754 acagggactaaaaccggaattcgctaatattacagagatgaaaagaggtatttaccc 20995698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 24467685 - 24467629
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    |||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||    
T  24467685 acagggactaaaattggaattcgctaatattacagggacgaaaagatgtatttaccc 24467629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 39711394 - 39711450
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||| ||||||||||    
T  39711394 acagggactaaaaccagaattcgctaatattacagggacgaaaagaggtatttaccc 39711450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 39826368 - 39826424
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    |||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||    
T  39826368 acagggactaaaaccgaaattcgctaatattacatggacgaaaagaggtatttaccc 39826424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 82
Target Start/End: Complemental strand, 17606360 - 17606307
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtattta 82  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||| |||||||    
T  17606360 acagggactaaaatcggaattcgctaatattacagggacgaaaagaggtattta 17606307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 85
Target Start/End: Complemental strand, 33628743 - 33628690
Alignment:
Q  33 gggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    |||||||||||| |||||||||||||||||| ||||||||||| ||||||||||    
T  33628743 gggactaaaaccagaattcgctaatattacagggacgaaaagaggtatttaccc 33628690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 18342339 - 18342395
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    |||||||||||||||| ||||||||||||||||| ||||||||| | ||||||||||    
T  18342339 acagggactaaaaccgaaattcgctaatattacagggacgaaaaaaggtatttaccc 18342395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 29696621 - 29696565
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    |||| ||||||||||| ||||||||||||||||| ||||||||||| ||||||||||    
T  29696621 acagagactaaaaccgaaattcgctaatattacagggacgaaaagaggtatttaccc 29696565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 33629012 - 33629068
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    |||||||||||||||||||||||||||||||||| |||| |||||| ||||| ||||    
T  33629012 acagggactaaaaccggaattcgctaatattacagggacaaaaagaggtattaaccc 33629068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 39970968 - 39971024
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    |||||||||||||||| |||||| |||||||||| ||||||||||| ||||||||||    
T  39970968 acagggactaaaaccgaaattcgttaatattacatggacgaaaagaggtatttaccc 39971024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 32 - 85
Target Start/End: Complemental strand, 34749192 - 34749138
Alignment:
Q  32 agggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    ||||||||||| | |||||||||||||||||| ||| ||||||||||||||||||    
T  34749192 agggactaaaatcagaattcgctaatattacagggatgaaaagatgtatttaccc 34749138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 36 - 85
Target Start/End: Complemental strand, 52058061 - 52058011
Alignment:
Q  36 actaaaaccggaattcgctaatattac-aggacgaaaagatgtatttaccc 85  Q
    ||||||||||||||||| ||||||||| |||||||||||| ||||||||||    
T  52058061 actaaaaccggaattcgttaatattacaaggacgaaaagaggtatttaccc 52058011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 4907018 - 4906962
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    ||||||||||||||  |||||| ||||||||||| ||||||||||| ||||||||||    
T  4907018 acagggactaaaactagaattcactaatattacagggacgaaaagaggtatttaccc 4906962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 8292860 - 8292804
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    ||||||||||||||||| ||||||||||| |||| |||||||||||  |||||||||    
T  8292860 acagggactaaaaccgggattcgctaatagtacagggacgaaaagagttatttaccc 8292804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 24467949 - 24468002
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattacaggacgaaaagatgtatttaccc 85  Q
    |||||||||||||||||||||| ||||||||||| |  ||||||| ||||||||||    
T  24467949 acagggactaaaaccggaattcactaatattacatg--gaaaagaggtatttaccc 24468002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 29696879 - 29696935
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    |||| |||||||||||||||||||||||||||||   ||||||||| ||||||||||    
T  29696879 acagtgactaaaaccggaattcgctaatattacataaacgaaaagaggtatttaccc 29696935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 39826106 - 39826050
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    ||||||||||||| || ||||||||||||||| | ||||||||||| ||||||||||    
T  39826106 acagggactaaaatcgaaattcgctaatattatatggacgaaaagaggtatttaccc 39826050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 85
Target Start/End: Original strand, 48072287 - 48072339
Alignment:
Q  34 ggactaaaaccggaattcgctaatattac-aggacgaaaagatgtatttaccc 85  Q
    |||||||||||||||||| |||||||||| | |||||||||| ||||||||||    
T  48072287 ggactaaaaccggaattcactaatattacaatgacgaaaagaggtatttaccc 48072339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 52058330 - 52058386
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    ||||| |||||||||  ||||||||||||||||| ||||||||||| ||||||||||    
T  52058330 acaggaactaaaaccaaaattcgctaatattacagggacgaaaagaggtatttaccc 52058386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 65
Target Start/End: Original strand, 4907284 - 4907319
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattacagg 65  Q
    |||||||||||||| |||||||||||||||||||||    
T  4907284 acagggactaaaactggaattcgctaatattacagg 4907319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 85
Target Start/End: Original strand, 13230059 - 13230110
Alignment:
Q  35 gactaaaaccggaattcgctaatattacag-gacgaaaagatgtatttaccc 85  Q
    ||||||||||| |||||||||||||| ||| |||||||||| ||||||||||    
T  13230059 gactaaaaccgaaattcgctaatatttcagagacgaaaagaggtatttaccc 13230110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 65
Target Start/End: Complemental strand, 17500825 - 17500790
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattacagg 65  Q
    |||| |||||||||||||||||||||||||||||||    
T  17500825 acagagactaaaaccggaattcgctaatattacagg 17500790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 63
Target Start/End: Original strand, 17502053 - 17502084
Alignment:
Q  32 agggactaaaaccggaattcgctaatattaca 63  Q
    ||||||||||||||||||||||||||||||||    
T  17502053 agggactaaaaccggaattcgctaatattaca 17502084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 65
Target Start/End: Complemental strand, 42510071 - 42510036
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattacagg 65  Q
    ||||||| ||||||||||||||||||||||||||||    
T  42510071 acagggattaaaaccggaattcgctaatattacagg 42510036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 65
Target Start/End: Original strand, 42510341 - 42510372
Alignment:
Q  34 ggactaaaaccggaattcgctaatattacagg 65  Q
    ||||||||||||||||||||||||||||||||    
T  42510341 ggactaaaaccggaattcgctaatattacagg 42510372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 65
Target Start/End: Complemental strand, 37236772 - 37236739
Alignment:
Q  32 agggactaaaaccggaattcgctaatattacagg 65  Q
    ||||||||||||||||||||||| ||||||||||    
T  37236772 agggactaaaaccggaattcgctcatattacagg 37236739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 74
Target Start/End: Original strand, 43539669 - 43539714
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaaga 74  Q
    ||||| ||||||||||||||| |||||||||||| |||||||||||    
T  43539669 acaggaactaaaaccggaatttgctaatattacagggacgaaaaga 43539714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 8293130 - 8293186
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    ||||||||||||||  ||||||| |||||||| | ||||||||||| ||||||||||    
T  8293130 acagggactaaaactagaattcgttaatattatagggacgaaaagaggtatttaccc 8293186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 85
Target Start/End: Complemental strand, 27039690 - 27039638
Alignment:
Q  34 ggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    |||| |||||||||||||||| |||||||| ||||||||||| ||||| ||||    
T  27039690 ggaccaaaaccggaattcgctcatattacagggacgaaaagaggtattaaccc 27039638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 85
Target Start/End: Complemental strand, 30299284 - 30299232
Alignment:
Q  34 ggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    ||||||||| || | ||||||||||||||| ||||||||||| ||||||||||    
T  30299284 ggactaaaatcgaagttcgctaatattacagggacgaaaagaggtatttaccc 30299232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 30299553 - 30299609
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattacag-gacgaaaagatgtatttaccc 85  Q
    ||||| |||||||||| |||| ||||||||||||| |||||||| | ||||||||||    
T  30299553 acaggaactaaaaccgaaatttgctaatattacagagacgaaaataggtatttaccc 30299609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 85
Target Start/End: Original strand, 34749431 - 34749483
Alignment:
Q  34 ggactaaaaccggaattcgctaatattacag-gacgaaaagatgtatttaccc 85  Q
    ||||||||| ||||||||| ||||||||||| ||| |||||| ||||||||||    
T  34749431 ggactaaaatcggaattcgataatattacagagacaaaaagaggtatttaccc 34749483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 43400809 - 43400753
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattacag-gacgaaaagatgtatttaccc 85  Q
    |||||||| |||||||||||||||| |||||| || |||||||||| ||||| ||||    
T  43400809 acagggaccaaaaccggaattcgctcatattatagagacgaaaagaggtattaaccc 43400753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 9e-17; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 5554925 - 5554869
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  5554925 acagggactaaaaccggaattcgctaatattacagggacgaaaagaggtatttaccc 5554869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 10108426 - 10108370
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  10108426 acagggactaaaaccggaattcgctaatattacagggacgaaaagaggtatttaccc 10108370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 43851721 - 43851665
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  43851721 acagggactaaaaccggaattcgctaatattacagggacgaaaagaggtatttaccc 43851665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 10171465 - 10171521
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    |||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||    
T  10171465 acagggactaaaaccggaattcgctaatattacagggacgaaaagcggtatttaccc 10171521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 14820351 - 14820295
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  14820351 acaggaactaaaaccggaattcgctaatattacagggacgaaaagaggtatttaccc 14820295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 34 - 85
Target Start/End: Original strand, 18044153 - 18044205
Alignment:
Q  34 ggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  18044153 ggactaaaaccggaattcgctaatattacagggacgaaaagaggtatttaccc 18044205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 21148258 - 21148314
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattacag-gacgaaaagatgtatttaccc 85  Q
    |||||||||||||||||||||| |||||||||||| |||||||||| ||||||||||    
T  21148258 acagggactaaaaccggaattcactaatattacagagacgaaaagaggtatttaccc 21148314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 34 - 85
Target Start/End: Original strand, 7689849 - 7689901
Alignment:
Q  34 ggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    ||||||||| |||||||||||||||||||| ||||||||||| ||||||||||    
T  7689849 ggactaaaatcggaattcgctaatattacagggacgaaaagaggtatttaccc 7689901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 10108692 - 10108748
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||| ||||| ||||    
T  10108692 acagggactaaaaccggaatttgctaatattacagggacgaaaagaggtattaaccc 10108748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 14820616 - 14820672
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    |||||||||||||||||||||||||||||||||| |||| |||||| ||||| ||||    
T  14820616 acagggactaaaaccggaattcgctaatattacagggactaaaagaggtattaaccc 14820672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 17622946 - 17622890
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattac-aggacgaaaagatgtatttaccc 85  Q
    |||||||||||||| | |||||||||||||||| |||||||||||| ||||||||||    
T  17622946 acagggactaaaactgaaattcgctaatattacaaggacgaaaagaggtatttaccc 17622890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 21147992 - 21147936
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    |||||||||||||||||||||||||||||||||| |||| |||||| ||||| ||||    
T  21147992 acagggactaaaaccggaattcgctaatattacagggacaaaaagaggtattaaccc 21147936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 26136741 - 26136685
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattacagg-acgaaaagatgtatttaccc 85  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||| ||||| ||||    
T  26136741 acagggactaaaactggaattcgctaatattacaggaacgaaaagaggtattcaccc 26136685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 30789829 - 30789885
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    |||||||||||||||||||||  ||||||||||| ||||||||||| ||||||||||    
T  30789829 acagggactaaaaccggaatttactaatattacagggacgaaaagaggtatttaccc 30789885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 42113303 - 42113359
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    ||||| |||||||||| |||||| |||||||||| ||||||||||||||||||||||    
T  42113303 acaggaactaaaaccgaaattcgttaatattacagggacgaaaagatgtatttaccc 42113359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 43481637 - 43481693
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattacag-gacgaaaagatgtatttaccc 85  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||  |||||||||    
T  43481637 acagagactaaaaccggaattcgctaatattacagtgacgaaaagagatatttaccc 43481693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 74
Target Start/End: Complemental strand, 30789564 - 30789519
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaaga 74  Q
    ||||||||||||| |||||||||||||||||||| |||||||||||    
T  30789564 acagggactaaaatcggaattcgctaatattacagggacgaaaaga 30789519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 74
Target Start/End: Complemental strand, 42113041 - 42112996
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaaga 74  Q
    ||||||||||||| |||||||||||||||||||| |||||||||||    
T  42113041 acagggactaaaatcggaattcgctaatattacagggacgaaaaga 42112996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 85
Target Start/End: Complemental strand, 7689576 - 7689524
Alignment:
Q  34 ggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    |||||||| ||| ||||||||||||||||| ||||||||||| ||||||||||    
T  7689576 ggactaaagccgaaattcgctaatattacagggacgaaaagaggtatttaccc 7689524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 35367466 - 35367410
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    ||||||| ||||||||||||||||||||||| || |||| |||||| ||||||||||    
T  35367466 acagggattaaaaccggaattcgctaatattgcagggaccaaaagaggtatttaccc 35367410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 85
Target Start/End: Original strand, 20877069 - 20877123
Alignment:
Q  32 agggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    ||||||||||||||||||||||| |||||||| |||| |||||| ||||| ||||    
T  20877069 agggactaaaaccggaattcgctcatattacagggaccaaaagaggtattaaccc 20877123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 74
Target Start/End: Original strand, 5555191 - 5555236
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaaga 74  Q
    |||| ||||||||||| ||||||||||||||||| |||||||||||    
T  5555191 acagagactaaaaccgaaattcgctaatattacagggacgaaaaga 5555236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 63
Target Start/End: Original strand, 40487736 - 40487769
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca 63  Q
    |||||||||||||| |||||||||||||||||||    
T  40487736 acagggactaaaactggaattcgctaatattaca 40487769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 2583643 - 2583699
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattac-aggacgaaaagatgtatttaccc 85  Q
    |||||| |||||||  ||||||||||||||||| ||||||||||||  |||||||||    
T  2583643 acagggcctaaaactagaattcgctaatattacgaggacgaaaagagatatttaccc 2583699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 14767826 - 14767882
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattacagg-acgaaaagatgtatttaccc 85  Q
    ||||||||||||| || ||||  ||||||||||||| ||||||||| ||||||||||    
T  14767826 acagggactaaaaacgaaatttactaatattacaggaacgaaaagaggtatttaccc 14767882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 62
Target Start/End: Complemental strand, 21144630 - 21144598
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattac 62  Q
    |||||||||||||||||||||| ||||||||||    
T  21144630 acagggactaaaaccggaattctctaatattac 21144598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 9e-17; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 23704982 - 23705038
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattacag-gacgaaaagatgtatttaccc 85  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||    
T  23704982 acagggactaaaaccggaattcgctaatattacagagacgaaaagaggtatttaccc 23705038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 28218234 - 28218178
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  28218234 acagggactaaaaccggaattcgctaatattacagggacgaaaagaggtatttaccc 28218178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 28218485 - 28218541
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  28218485 acagggactaaaaccggaattcgctaatattacagggacgaaaagaggtatttaccc 28218541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 12006597 - 12006541
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||    
T  12006597 acagggactaaaatcggaattcgctaatattacagggacgaaaagaggtatttaccc 12006541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 20419592 - 20419536
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    |||||||||||||||||||||||||||||||| | ||||||||||| ||||||||||    
T  20419592 acagggactaaaaccggaattcgctaatattatagggacgaaaagaggtatttaccc 20419536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 20458748 - 20458692
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    ||||||||||||||||||||||| |||||||||| ||||||||| ||||||||||||    
T  20458748 acagggactaaaaccggaattcgttaatattacagggacgaaaaaatgtatttaccc 20458692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 20963815 - 20963871
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    |||||||||||||||||||||||||||||||||| |||| |||||| ||||||||||    
T  20963815 acagggactaaaaccggaattcgctaatattacagggacaaaaagaggtatttaccc 20963871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 41600280 - 41600336
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    |||||||||||||||||||||||||||||||||| |||| |||||| ||||||||||    
T  41600280 acagggactaaaaccggaattcgctaatattacagggacaaaaagaggtatttaccc 41600336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 48672601 - 48672657
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattacag-gacgaaaagatgtatttaccc 85  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||    
T  48672601 acagggactaaaaccgaaattcgctaatattacagagacgaaaagaggtatttaccc 48672657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 32 - 85
Target Start/End: Complemental strand, 23383553 - 23383499
Alignment:
Q  32 agggactaaaaccggaattcgctaatattacag-gacgaaaagatgtatttaccc 85  Q
    |||||||||||||||||||| |||||||||||| |||||||||| ||||||||||    
T  23383553 agggactaaaaccggaattcactaatattacagagacgaaaagaagtatttaccc 23383499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 6465911 - 6465855
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |  |||||||||    
T  6465911 acagggactaaaaccggaattcgctaatattacatggacgaaaaaagatatttaccc 6465855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 10409695 - 10409751
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    ||||||||||||| |||||||||||||||||||| ||| ||||||| ||||||||||    
T  10409695 acagggactaaaatcggaattcgctaatattacatggatgaaaagaggtatttaccc 10409751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 12006862 - 12006918
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    ||||||||||||| |||||||||||||||||||| | ||||||||| ||||||||||    
T  12006862 acagggactaaaatcggaattcgctaatattacatgaacgaaaagaggtatttaccc 12006918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 16995256 - 16995200
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattacag-gacgaaaagatgtatttaccc 85  Q
    ||||| |||||||||| |||||||||||||||||| |||||||||| ||||||||||    
T  16995256 acaggaactaaaaccgaaattcgctaatattacagagacgaaaagaggtatttaccc 16995200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 20419859 - 20419915
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    ||||||||||||||||||||||| |||||||||| |||| |||||| ||||||||||    
T  20419859 acagggactaaaaccggaattcgttaatattacagggacaaaaagaggtatttaccc 20419915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 38 - 85
Target Start/End: Complemental strand, 23704710 - 23704662
Alignment:
Q  38 taaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  23704710 taaaaccggaattcgctaatattacagggacgaaaagaggtatttaccc 23704662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 85
Target Start/End: Original strand, 38880048 - 38880099
Alignment:
Q  35 gactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    |||||||||||||||| |||||||||||| ||||||||||| ||||||||||    
T  38880048 gactaaaaccggaatttgctaatattacagggacgaaaagaggtatttaccc 38880099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 82
Target Start/End: Complemental strand, 7658025 - 7657972
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtattta 82  Q
    ||||||| |||||||| ||||||||||||||||| ||||||||||| |||||||    
T  7658025 acagggattaaaaccgaaattcgctaatattacatggacgaaaagaggtattta 7657972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 85
Target Start/End: Original strand, 24195198 - 24195250
Alignment:
Q  34 ggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    ||||||||| | |||||||||||||||||| ||||||||||| ||||||||||    
T  24195198 ggactaaaatcagaattcgctaatattacagggacgaaaagaggtatttaccc 24195250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 85
Target Start/End: Original strand, 33162862 - 33162914
Alignment:
Q  34 ggactaaaaccggaattcgctaatattacag-gacgaaaagatgtatttaccc 85  Q
    |||||||||| | |||||||||||||||||| |||||||||| ||||||||||    
T  33162862 ggactaaaacagaaattcgctaatattacagagacgaaaagaggtatttaccc 33162914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 38879779 - 38879723
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    ||||| |||||||  ||||||||||||||||||| ||||||||||| ||||||||||    
T  38879779 acaggaactaaaattggaattcgctaatattacagggacgaaaagaggtatttaccc 38879723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 85
Target Start/End: Complemental strand, 41600010 - 41599958
Alignment:
Q  34 ggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    |||||||||||| ||||||||||||||||| ||| ||||||| ||||||||||    
T  41600010 ggactaaaaccgaaattcgctaatattacagggatgaaaagaggtatttaccc 41599958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 48672333 - 48672277
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    |||| ||||||||||| ||||| ||||||||||| ||||||||||| ||||||||||    
T  48672333 acagagactaaaaccgaaattcactaatattacagggacgaaaagaggtatttaccc 48672277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 84
Target Start/End: Original strand, 7658287 - 7658342
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttacc 84  Q
    |||| ||||||||||| |||||| |||||||||| ||||||||||| |||||||||    
T  7658287 acagagactaaaaccgaaattcgttaatattacagggacgaaaagaggtatttacc 7658342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 65
Target Start/End: Original strand, 14646972 - 14647007
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattacagg 65  Q
    ||||||||||||||||||||||||| ||||||||||    
T  14646972 acagggactaaaaccggaattcgctcatattacagg 14647007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 85
Target Start/End: Original strand, 23383823 - 23383878
Alignment:
Q  31 cagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    |||||||||||| | |||||| ||||||||||| ||||||||||| ||||||||||    
T  23383823 cagggactaaaatcagaattcactaatattacagggacgaaaagaggtatttaccc 23383878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 85
Target Start/End: Original strand, 20459022 - 20459068
Alignment:
Q  40 aaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    |||||||||||| ||||||||||| ||||||||||| ||||||||||    
T  20459022 aaaccggaattccctaatattacagggacgaaaagaggtatttaccc 20459068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 64
Target Start/End: Original strand, 23258246 - 23258280
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattacag 64  Q
    |||||||| ||||||||||||||||||||||||||    
T  23258246 acagggaccaaaaccggaattcgctaatattacag 23258280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 85
Target Start/End: Complemental strand, 25772414 - 25772364
Alignment:
Q  36 actaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    ||||||| || ||||||||||||||||| ||||||||||| ||||||||||    
T  25772414 actaaaatcgaaattcgctaatattacagggacgaaaagaggtatttaccc 25772364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 74
Target Start/End: Original strand, 1250528 - 1250573
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattac-aggacgaaaaga 74  Q
    |||| ||||||||| |||||||||||||||||| ||||||||||||    
T  1250528 acagagactaaaactggaattcgctaatattacaaggacgaaaaga 1250573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 63
Target Start/End: Complemental strand, 14630392 - 14630359
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca 63  Q
    ||||||||||||||||||||||||| ||||||||    
T  14630392 acagggactaaaaccggaattcgctcatattaca 14630359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 66
Target Start/End: Original strand, 14800978 - 14801014
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattacagga 66  Q
    |||||||||||||||| |||||||| |||||||||||    
T  14800978 acagggactaaaaccgaaattcgctcatattacagga 14801014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 66
Target Start/End: Original strand, 15247970 - 15248006
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattacagga 66  Q
    |||||||||||||||| |||||||| |||||||||||    
T  15247970 acagggactaaaaccgaaattcgctcatattacagga 15248006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 25772653 - 25772709
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    |||||||||||||| ||||||| ||||||||| | |||||||||||  |||||||||    
T  25772653 acagggactaaaactggaattcactaatattatagggacgaaaagagatatttaccc 25772709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 9e-17; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 9481238 - 9481182
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  9481238 acagggactaaaaccggaattcgctaatattacagggacgaaaagaggtatttaccc 9481182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 24731991 - 24731935
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  24731991 acagggactaaaaccggaattcgctaatattacagggacgaaaagaggtatttaccc 24731935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 32017825 - 32017881
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    |||||||||||||||||||||||||||||||||| |||||||||||  |||||||||    
T  32017825 acagggactaaaaccggaattcgctaatattacagggacgaaaagagatatttaccc 32017881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 31 - 81
Target Start/End: Complemental strand, 10321788 - 10321737
Alignment:
Q  31 cagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtattt 81  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  10321788 cagggactaaaaccggaattcgctaatattacagggacgaaaagaagtattt 10321737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 82
Target Start/End: Original strand, 26385596 - 26385649
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtattta 82  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||| |||||||    
T  26385596 acagggactaaaatcggaattcgctaatattacagggacgaaaagaggtattta 26385649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 2299635 - 2299691
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattacagg-acgaaaagatgtatttaccc 85  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||  |||||||||    
T  2299635 acaggaactaaaaccggaattcgctaatattacaggaacgaaaagagatatttaccc 2299691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 18500371 - 18500315
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    |||||||||||||||| ||||||||||||||| | ||||||||||| ||||||||||    
T  18500371 acagggactaaaaccgaaattcgctaatattatagggacgaaaagaggtatttaccc 18500315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 34 - 85
Target Start/End: Original strand, 18500655 - 18500707
Alignment:
Q  34 ggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    |||||||||||| ||||||||||||||||| ||||||||||| ||||||||||    
T  18500655 ggactaaaaccgaaattcgctaatattacagggacgaaaagaggtatttaccc 18500707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 34 - 85
Target Start/End: Complemental strand, 26385330 - 26385278
Alignment:
Q  34 ggactaaaaccggaattcgctaatattacag-gacgaaaagatgtatttaccc 85  Q
    ||||||||||| ||||||||||||||||||| |||||||||| ||||||||||    
T  26385330 ggactaaaaccagaattcgctaatattacagagacgaaaagaggtatttaccc 26385278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 63
Target Start/End: Complemental strand, 2299396 - 2299363
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca 63  Q
    ||||||||||||||||||||||||||||||||||    
T  2299396 acagggactaaaaccggaattcgctaatattaca 2299363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 82
Target Start/End: Complemental strand, 33714531 - 33714486
Alignment:
Q  38 taaaaccggaattcgctaatattaca-ggacgaaaagatgtattta 82  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||    
T  33714531 taaaaccggaattcgctaatattacagggacgaaaagatttattta 33714486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 84
Target Start/End: Complemental strand, 19284181 - 19284130
Alignment:
Q  34 ggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttacc 84  Q
    |||||||||| ||||||||||||||||||| | ||||||||| |||||||||    
T  19284181 ggactaaaactggaattcgctaatattacatgaacgaaaagaggtatttacc 19284130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 65
Target Start/End: Complemental strand, 21069570 - 21069535
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattacagg 65  Q
    ||||||||||||||||||||||||| ||||||||||    
T  21069570 acagggactaaaaccggaattcgctcatattacagg 21069535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 82
Target Start/End: Complemental strand, 30458950 - 30458903
Alignment:
Q  36 actaaaaccggaattcgctaatattaca-ggacgaaaagatgtattta 82  Q
    |||||||||| ||||| ||||||||||| |||||||||||||||||||    
T  30458950 actaaaaccgaaattcactaatattacagggacgaaaagatgtattta 30458903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 63
Target Start/End: Original strand, 3230184 - 3230217
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca 63  Q
    ||||||||||||| ||||||||||||||||||||    
T  3230184 acagggactaaaatcggaattcgctaatattaca 3230217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 85
Target Start/End: Original strand, 24732274 - 24732315
Alignment:
Q  45 ggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    ||||||||||||||||||| ||||||||||| ||||||||||    
T  24732274 ggaattcgctaatattacagggacgaaaagaggtatttaccc 24732315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 85
Target Start/End: Complemental strand, 30618019 - 30617967
Alignment:
Q  34 ggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    ||||||||| | |||||| ||||||||||| ||||||||||| ||||||||||    
T  30618019 ggactaaaatcagaattcactaatattacagggacgaaaagaggtatttaccc 30617967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 9e-17; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 14143958 - 14143902
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  14143958 acagggactaaaaccggaattcgctaatattacagggacgaaaagaggtatttaccc 14143902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 14411753 - 14411697
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  14411753 acagggactaaaaccggaattcgctaatattacagggacgaaaagaggtatttaccc 14411697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 23979223 - 23979279
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  23979223 acagggactaaaaccggaattcgctaatattacagggacgaaaagaggtatttaccc 23979279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 30 - 84
Target Start/End: Complemental strand, 993806 - 993751
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattacag-gacgaaaagatgtatttacc 84  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||    
T  993806 acagggactaaaaccggaattcgctaatattacagagacgaaaagaagtatttacc 993751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 6817179 - 6817123
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattac-aggacgaaaagatgtatttaccc 85  Q
    |||||||||||||||||||||| |||||||||| |||||||||||| ||||||||||    
T  6817179 acagggactaaaaccggaattcactaatattacaaggacgaaaagaggtatttaccc 6817123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 17762339 - 17762283
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    |||||||||||||||||||||||||||||||||| |||| |||||| ||||||||||    
T  17762339 acagggactaaaaccggaattcgctaatattacagggacaaaaagaggtatttaccc 17762283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 24074359 - 24074303
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    |||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||    
T  24074359 acagggactaaaaccgaaattcgctaatattacatggacgaaaagaggtatttaccc 24074303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 34 - 85
Target Start/End: Original strand, 24651025 - 24651077
Alignment:
Q  34 ggactaaaaccggaattcgctaatattacag-gacgaaaagatgtatttaccc 85  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||||||||||    
T  24651025 ggactaaaaccggaattcgctaatattacagagacgaaaagaggtatttaccc 24651077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 24837225 - 24837169
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||||    
T  24837225 acagggactaaaaccggaattcgctattattacagggacgaaaagaggtatttaccc 24837169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 24837491 - 24837547
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||| ||||||||||    
T  24837491 acagggactaaaactggaattcgctaatattacagggacgaaaagaggtatttaccc 24837547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 17762604 - 17762660
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    ||||||||||||||| ||||||||||||| |||| ||||||||||| ||||||||||    
T  17762604 acagggactaaaaccagaattcgctaatactacagggacgaaaagaggtatttaccc 17762660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 18336778 - 18336833
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||    
T  18336778 acagggactaaaaccggaattcgctaat-ttacagggacgaaaagaggtatttaccc 18336833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 31799696 - 31799640
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    ||||||||| |||||||||||||||||||||| | ||||||||||| ||||||||||    
T  31799696 acagggactgaaaccggaattcgctaatattatagggacgaaaagaggtatttaccc 31799640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 84
Target Start/End: Original strand, 4919311 - 4919366
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattacag-gacgaaaagatgtatttacc 84  Q
    ||||| ||||||||||||||||||||||||| ||| |||||||||| |||||||||    
T  4919311 acaggaactaaaaccggaattcgctaatattccagagacgaaaagaggtatttacc 4919366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 80
Target Start/End: Complemental strand, 7125974 - 7125923
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattacagg-acgaaaagatgtatt 80  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||| |||||    
T  7125974 acagggactaaaatcggaattcgctaatattacaggaacgaaaagaggtatt 7125923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 85
Target Start/End: Original strand, 7126244 - 7126295
Alignment:
Q  35 gactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    ||||||||||||||||||||||||||||| ||| ||||||| ||||||||||    
T  7126244 gactaaaaccggaattcgctaatattacagggatgaaaagaggtatttaccc 7126295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 84
Target Start/End: Original strand, 41001678 - 41001729
Alignment:
Q  34 ggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttacc 84  Q
    |||||||||||||||||||||||||||||| ||||||||| | |||||||||    
T  41001678 ggactaaaaccggaattcgctaatattacagggacgaaaaaaggtatttacc 41001729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 4919045 - 4918989
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattacag-gacgaaaagatgtatttaccc 85  Q
    ||||| |||||||||| |||||||||||||||||| || ||||||| ||||||||||    
T  4919045 acaggaactaaaaccgaaattcgctaatattacagagatgaaaagaggtatttaccc 4918989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 14144223 - 14144279
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattacag-gacgaaaagatgtatttaccc 85  Q
    ||||||||||||| ||||||||| ||||||||||| |||||||||| ||||| ||||    
T  14144223 acagggactaaaatcggaattcgttaatattacagtgacgaaaagaggtattaaccc 14144279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 18336523 - 18336467
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    ||||||||||||| |||||||||||||||||| | |||||||||||  |||||||||    
T  18336523 acagggactaaaatcggaattcgctaatattatagggacgaaaagagatatttaccc 18336467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 81
Target Start/End: Original strand, 31799965 - 31800013
Alignment:
Q  34 ggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtattt 81  Q
    |||||||||||||||||||||||||||| | ||||||||||| ||||||    
T  31799965 ggactaaaaccggaattcgctaatattatagggacgaaaagaggtattt 31800013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 80
Target Start/End: Original strand, 27159280 - 27159327
Alignment:
Q  34 ggactaaaaccggaattcgctaatattac-aggacgaaaagatgtatt 80  Q
    |||||||||||| |||||||||||||||| |||||||||||| |||||    
T  27159280 ggactaaaaccgaaattcgctaatattacaaggacgaaaagaggtatt 27159327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 65
Target Start/End: Complemental strand, 41001412 - 41001377
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattacagg 65  Q
    |||||||||||||||| |||||||||||||||||||    
T  41001412 acagggactaaaaccgaaattcgctaatattacagg 41001377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 63
Target Start/End: Complemental strand, 22571133 - 22571100
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca 63  Q
    ||||||||||||| ||||||||||||||||||||    
T  22571133 acagggactaaaatcggaattcgctaatattaca 22571100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 34 - 74
Target Start/End: Original strand, 29445131 - 29445172
Alignment:
Q  34 ggactaaaaccggaattcgctaatattaca-ggacgaaaaga 74  Q
    |||||||||| ||||||||||||||||||| |||||||||||    
T  29445131 ggactaaaactggaattcgctaatattacagggacgaaaaga 29445172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 14411987 - 14412043
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattacag-gacgaaaagatgtatttaccc 85  Q
    |||||||||||||||| |||||| |||||||| || || ||||||| ||||||||||    
T  14411987 acagggactaaaaccgaaattcgttaatattatagagatgaaaagaggtatttaccc 14412043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 20709533 - 20709589
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    |||||||||||||||  |||||| |||||||||| ||||||||||| ||||| ||||    
T  20709533 acagggactaaaaccaaaattcgttaatattacatggacgaaaagaggtattaaccc 20709589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 30512344 - 30512288
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    |||||||||||||||  ||||| ||||||||||| |||||||||||  |||||||||    
T  30512344 acagggactaaaaccaaaattcactaatattacagggacgaaaagagatatttaccc 30512288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 30552684 - 30552628
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    |||||||||||||||  ||||| ||||||||||| |||||||||||  |||||||||    
T  30552684 acagggactaaaaccaaaattcactaatattacagggacgaaaagagatatttaccc 30552628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 45; Significance: 9e-17; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 31218303 - 31218359
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  31218303 acagggactaaaaccggaattcgctaatattacagggacgaaaagaggtatttaccc 31218359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 32 - 85
Target Start/End: Original strand, 3273943 - 3273996
Alignment:
Q  32 agggactaaaaccggaattcgctaatattacaggacgaaaagatgtatttaccc 85  Q
    |||||||||||||| |||||||||||||||| ||||||||||| ||||||||||    
T  3273943 agggactaaaaccgaaattcgctaatattacgggacgaaaagaggtatttaccc 3273996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 9397020 - 9397076
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||| ||||||||||    
T  9397020 acagggactaaaaccggaatttgctaatattacagggacgaaaagaagtatttaccc 9397076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 31 - 85
Target Start/End: Complemental strand, 41947020 - 41946965
Alignment:
Q  31 cagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||    
T  41947020 cagggactaaaaccggaattcactaatattacagggacgaaaagaggtatttaccc 41946965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 33 - 82
Target Start/End: Complemental strand, 3018064 - 3018014
Alignment:
Q  33 gggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtattta 82  Q
    ||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  3018064 gggactaaaaccggaattcgctaatattacagggacgaaaagaggtattta 3018014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 9619036 - 9618982
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttac 83  Q
    |||||||||||||||||||||||||||||||||| ||||||||| | ||||||||    
T  9619036 acagggactaaaaccggaattcgctaatattacatggacgaaaataggtatttac 9618982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 9619301 - 9619357
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    ||||||||||||||| |||||||||||||||||| |||| |||||| ||||||||||    
T  9619301 acagggactaaaaccagaattcgctaatattacagggacaaaaagaggtatttaccc 9619357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 31944005 - 31943950
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  31944005 acaggaactaaaaccggaattcgctaatattacagggacgaaaaga-gtatttaccc 31943950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 31944272 - 31944328
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattac-aggacgaaaagatgtatttaccc 85  Q
    |||| ||||||||||| |||||||||||||||| |||||||||||| ||||||||||    
T  31944272 acagagactaaaaccgaaattcgctaatattacaaggacgaaaagaagtatttaccc 31944328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 37013028 - 37013084
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    ||||||||||||||| |||||||||||||||||| |||||||| || ||||||||||    
T  37013028 acagggactaaaaccagaattcgctaatattacagggacgaaatgaggtatttaccc 37013084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 46046486 - 46046430
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    ||||||||||||| |||||||||||||||||||| ||||||||| | ||||||||||    
T  46046486 acagggactaaaatcggaattcgctaatattacagggacgaaaaaaggtatttaccc 46046430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 46046746 - 46046801
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    |||||||||||||||||||||||||||||||||| ||||||||| | ||||||||||    
T  46046746 acagggactaaaaccggaattcgctaatattacagggacgaaaa-aggtatttaccc 46046801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 48259879 - 48259823
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||  |||||||||    
T  48259879 acagggattaaaaccggaattcgctaatattacagggacgaaaagagatatttaccc 48259823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 84
Target Start/End: Complemental strand, 9516662 - 9516611
Alignment:
Q  34 ggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttacc 84  Q
    |||||||||||||||||||||||||||||| |||||||||||  ||||||||    
T  9516662 ggactaaaaccggaattcgctaatattacagggacgaaaagagatatttacc 9516611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 84
Target Start/End: Complemental strand, 35376219 - 35376164
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttacc 84  Q
    ||||||||||||||| |||||||||||||||||| ||||||||| | |||||||||    
T  35376219 acagggactaaaaccagaattcgctaatattacagggacgaaaataggtatttacc 35376164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 85
Target Start/End: Complemental strand, 3273674 - 3273621
Alignment:
Q  33 gggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    |||||||||| |||||||||||||||||||| |||||||||||  |||||||||    
T  3273674 gggactaaaatcggaattcgctaatattacagggacgaaaagagatatttaccc 3273621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 74
Target Start/End: Complemental strand, 15640772 - 15640727
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaaga 74  Q
    ||||| |||||||||||||||||||||||||||| |||||||||||    
T  15640772 acaggaactaaaaccggaattcgctaatattacagggacgaaaaga 15640727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 82
Target Start/End: Original strand, 38574290 - 38574343
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtattta 82  Q
    ||||||||||||||| |||||||||||||||||| ||||||||| | |||||||    
T  38574290 acagggactaaaaccagaattcgctaatattacagggacgaaaaaaggtattta 38574343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 9516932 - 9516988
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    |||| ||||||||||| ||||||||||||||||| |||||||||||  |||||||||    
T  9516932 acagagactaaaaccgaaattcgctaatattacagggacgaaaagagatatttaccc 9516988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 26252559 - 26252615
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    ||||| |||||||| ||||||||||||||||||| |||||||||||  |||||||||    
T  26252559 acaggaactaaaactggaattcgctaatattacagggacgaaaagagatatttaccc 26252615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 31090383 - 31090439
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    ||||||||||||| || ||||||||||||||||| |||||||||||  |||||||||    
T  31090383 acagggactaaaatcgaaattcgctaatattacagggacgaaaagagatatttaccc 31090439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 38574025 - 38573969
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    ||||||| ||||| |||||||| ||||||||||| ||||||||||| ||||||||||    
T  38574025 acagggattaaaatcggaattcactaatattacatggacgaaaagaggtatttaccc 38573969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 85
Target Start/End: Original strand, 41947180 - 41947232
Alignment:
Q  34 ggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    |||||||||||| ||||||||||||||||| |||||||||||  |||||||||    
T  41947180 ggactaaaaccgaaattcgctaatattacagggacgaaaagagatatttaccc 41947232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 84
Target Start/End: Original strand, 15641046 - 15641093
Alignment:
Q  38 taaaaccggaattcgctaatattac-aggacgaaaagatgtatttacc 84  Q
    |||||||||||||| |||||||||| |||||||||||| |||||||||    
T  15641046 taaaaccggaattcactaatattacaaggacgaaaagaggtatttacc 15641093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 84
Target Start/End: Complemental strand, 34064038 - 34063983
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttacc 84  Q
    ||||||||||||||  ||||||| |||||||||| ||||||||||| |||||||||    
T  34064038 acagggactaaaactagaattcgttaatattacagggacgaaaagaggtatttacc 34063983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 80
Target Start/End: Original strand, 48580196 - 48580239
Alignment:
Q  38 taaaaccggaattcgctaatattaca-ggacgaaaagatgtatt 80  Q
    |||||||||||||||||||||||||| ||||||||||| |||||    
T  48580196 taaaaccggaattcgctaatattacagggacgaaaagaggtatt 48580239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 64
Target Start/End: Original strand, 43313533 - 43313567
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattacag 64  Q
    ||||||||||||||| |||||||||||||||||||    
T  43313533 acagggactaaaaccagaattcgctaatattacag 43313567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 64
Target Start/End: Complemental strand, 53896502 - 53896468
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattacag 64  Q
    ||||||||||||||||||||||||| |||||||||    
T  53896502 acagggactaaaaccggaattcgctcatattacag 53896468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 74
Target Start/End: Original strand, 3018332 - 3018377
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaaga 74  Q
    |||||||||||||||| |||||| |||||||||| |||||||||||    
T  3018332 acagggactaaaaccgaaattcgttaatattacagggacgaaaaga 3018377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 82
Target Start/End: Complemental strand, 9396755 - 9396702
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtattta 82  Q
    |||| |||||||| || ||||||||||||||||| ||||||||||| |||||||    
T  9396755 acagagactaaaatcgaaattcgctaatattacagggacgaaaagaggtattta 9396702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 82
Target Start/End: Complemental strand, 13131996 - 13131943
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattac-aggacgaaaagatgtattta 82  Q
    |||||||||||||| | |||||| ||||||||| |||||||||||| |||||||    
T  13131996 acagggactaaaacagaaattcgttaatattacaaggacgaaaagaggtattta 13131943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 74
Target Start/End: Original strand, 35376449 - 35376494
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaaga 74  Q
    |||||||||||||| |||||| |||||||||||| |||||||||||    
T  35376449 acagggactaaaactggaatttgctaatattacagggacgaaaaga 35376494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 82
Target Start/End: Complemental strand, 7819066 - 7819018
Alignment:
Q  35 gactaaaaccggaattcgctaatattaca-ggacgaaaagatgtattta 82  Q
    ||||||||||||||||||||||||||| | || |||||||| |||||||    
T  7819066 gactaaaaccggaattcgctaatattatatggtcgaaaagaggtattta 7819018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 12904803 - 12904747
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    |||||||||||||||  ||||||||||||||| | |||||||||||  |||||||||    
T  12904803 acagggactaaaaccaaaattcgctaatattatagggacgaaaagagatatttaccc 12904747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 12904906 - 12904962
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    ||||||||||||| |  |||||||||||||||||   ||||||||||||||||||||    
T  12904906 acagggactaaaatcaaaattcgctaatattacataaacgaaaagatgtatttaccc 12904962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 85
Target Start/End: Original strand, 13132265 - 13132317
Alignment:
Q  34 ggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    ||||||||| || ||||||||||||||||| ||||||||| | ||||||||||    
T  13132265 ggactaaaatcgaaattcgctaatattacagggacgaaaataggtatttaccc 13132317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 85
Target Start/End: Original strand, 18667620 - 18667668
Alignment:
Q  38 taaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    |||||| ||||||||||||||||||| ||||||||||| ||||| ||||    
T  18667620 taaaactggaattcgctaatattacagggacgaaaagaggtattaaccc 18667668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 31090116 - 31090060
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    ||||||||||||| || ||||| ||||||||||| |||| |||||| ||||||||||    
T  31090116 acagggactaaaatcgaaattcactaatattacagggacaaaaagaagtatttaccc 31090060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 36887736 - 36887680
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    |||||||||||||||  ||||||||||||||||| |||| |||||| ||||| ||||    
T  36887736 acagggactaaaaccaaaattcgctaatattacagggaccaaaagaggtattaaccc 36887680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 9e-17; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 9267031 - 9266975
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  9267031 acagggactaaaaccggaattcgctaatattacagggacgaaaagaggtatttaccc 9266975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 14171908 - 14171964
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  14171908 acagggactaaaaccggaattcgctaatattacagggacgaaaagaggtatttaccc 14171964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 14262358 - 14262414
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  14262358 acagggactaaaaccggaattcgctaatattacagggacgaaaagaggtatttaccc 14262414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 19112820 - 19112764
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  19112820 acagggactaaaaccggaattcgctaatattacatggacgaaaagaggtatttaccc 19112764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 35995734 - 35995678
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattacagg-acgaaaagatgtatttaccc 85  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  35995734 acagggactaaaaccggaattcgctaatattacaggaacgaaaagaggtatttaccc 35995678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 35995997 - 35996053
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  35995997 acagggactaaaatcggaattcgctaatattacagggacgaaaagatgtatttaccc 35996053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 43572445 - 43572389
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattacagg-acgaaaagatgtatttaccc 85  Q
    |||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  43572445 acagggactaaaaccgaaattcgctaatattacaggaacgaaaagatgtatttaccc 43572389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 9267296 - 9267352
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattac-aggacgaaaagatgtatttaccc 85  Q
    ||||||||||||| ||||||||||||||||||| |||||||||||| ||||||||||    
T  9267296 acagggactaaaatcggaattcgctaatattacaaggacgaaaagaggtatttaccc 9267352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 16722047 - 16721991
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  16722047 acagtgactaaaaccggaattcgctaatattacagggacgaaaagaggtatttaccc 16721991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 19720389 - 19720333
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    |||||||||||||||||||||||||||||||||| |||||||||||  |||||||||    
T  19720389 acagggactaaaaccggaattcgctaatattacagggacgaaaagagatatttaccc 19720333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 27946187 - 27946243
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattac-aggacgaaaagatgtatttaccc 85  Q
    |||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||    
T  27946187 acagggactaaaaccggaattcgctaatattactgggacgaaaagaggtatttaccc 27946243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 30500362 - 30500418
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||| ||||||||||    
T  30500362 acagggactaaaactggaattcgctaatattacagggacgaaaagaggtatttaccc 30500418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 45969971 - 45969915
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||    
T  45969971 acagggactaaaaccggaattcactaatattacagggacgaaaagaggtatttaccc 45969915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 30 - 84
Target Start/End: Original strand, 52553010 - 52553065
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattac-aggacgaaaagatgtatttacc 84  Q
    ||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||    
T  52553010 acagggactaaaactagaattcgctaatattacaaggacgaaaagatgtatttacc 52553065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 5800661 - 5800605
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    |||||||||||||||| |||||| |||||||||| ||||||||||| ||||||||||    
T  5800661 acagggactaaaaccgaaattcgttaatattacagggacgaaaagaggtatttaccc 5800605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 11003788 - 11003732
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattac-aggacgaaaagatgtatttaccc 85  Q
    ||||||||||||||||||||||| ||||||||| ||||| |||||| ||||||||||    
T  11003788 acagggactaaaaccggaattcggtaatattacaaggacaaaaagaggtatttaccc 11003732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 14162192 - 14162248
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    |||||||||||||||||||||||||||||||||| |||| |||||| ||||| ||||    
T  14162192 acagggactaaaaccggaattcgctaatattacagggacaaaaagaggtattaaccc 14162248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 16722313 - 16722369
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    |||||||||||||| | ||||||||||||||||| ||||||||||| ||||||||||    
T  16722313 acagggactaaaactgaaattcgctaatattacagggacgaaaagaggtatttaccc 16722369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 19113087 - 19113143
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    ||||||||||||||||||||||| |||||||| | ||||||||||| ||||||||||    
T  19113087 acagggactaaaaccggaattcgttaatattatagggacgaaaagaggtatttaccc 19113143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 45970238 - 45970294
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    |||||||||||||||| ||||| ||||||||||| ||||||||||| ||||||||||    
T  45970238 acagggactaaaaccgaaattcactaatattacagggacgaaaagaggtatttaccc 45970294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 49986583 - 49986527
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    |||| ||||||||||||||||| ||||||||||| ||||||||||| ||||||||||    
T  49986583 acagtgactaaaaccggaattctctaatattacagggacgaaaagaggtatttaccc 49986527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 80
Target Start/End: Complemental strand, 27946165 - 27946114
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatt 80  Q
    |||||||||||||||| ||||||||||||||||| ||||||||||| |||||    
T  27946165 acagggactaaaaccgaaattcgctaatattacagggacgaaaagaggtatt 27946114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 34 - 74
Target Start/End: Complemental strand, 14262088 - 14262047
Alignment:
Q  34 ggactaaaaccggaattcgctaatattaca-ggacgaaaaga 74  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  14262088 ggactaaaaccggaattcgctaatattacagggacgaaaaga 14262047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 65
Target Start/End: Original strand, 3425973 - 3426005
Alignment:
Q  33 gggactaaaaccggaattcgctaatattacagg 65  Q
    |||||||||||||||||||||||||||||||||    
T  3425973 gggactaaaaccggaattcgctaatattacagg 3426005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 5800927 - 5800982
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    |||||||||||| ||||||||||||||||||||| ||||||||||| ||||| ||||    
T  5800927 acagggactaaa-ccggaattcgctaatattacagggacgaaaagaggtattaaccc 5800982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 85
Target Start/End: Complemental strand, 20853743 - 20853695
Alignment:
Q  38 taaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    |||||||| ||||||||||||||||| ||||||||||| ||||||||||    
T  20853743 taaaaccgaaattcgctaatattacagggacgaaaagaggtatttaccc 20853695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 85
Target Start/End: Original strand, 20854021 - 20854073
Alignment:
Q  34 ggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    |||||||||||| ||||||||||||||||| |||||||||||  |||||||||    
T  20854021 ggactaaaaccgaaattcgctaatattacatggacgaaaagagatatttaccc 20854073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 30500099 - 30500043
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    |||||||||||||||| ||||||||||||||||| ||| ||||||| ||||| ||||    
T  30500099 acagggactaaaaccgaaattcgctaatattacagggatgaaaagaggtattaaccc 30500043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 33372462 - 33372406
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    ||||| ||||||||| |||||||||||||||||| |||||||||||  |||||||||    
T  33372462 acaggaactaaaaccagaattcgctaatattacagggacgaaaagagatatttaccc 33372406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 65
Target Start/End: Complemental strand, 35740870 - 35740838
Alignment:
Q  33 gggactaaaaccggaattcgctaatattacagg 65  Q
    |||||||||||||||||||||||||||||||||    
T  35740870 gggactaaaaccggaattcgctaatattacagg 35740838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 45003817 - 45003873
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    ||||| |||||||||| ||||||||||||||||| |||||||| ||| |||||||||    
T  45003817 acaggaactaaaaccgaaattcgctaatattacagggacgaaacgatatatttaccc 45003873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 49986850 - 49986906
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattac-aggacgaaaagatgtatttaccc 85  Q
    ||||| |||||||||| ||||||||||||||||  ||||||||||| ||||||||||    
T  49986850 acaggaactaaaaccgaaattcgctaatattactgggacgaaaagaggtatttaccc 49986906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 65
Target Start/End: Original strand, 35741906 - 35741941
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattacagg 65  Q
    |||||||||||||| |||||||||||||||||||||    
T  35741906 acagggactaaaactggaattcgctaatattacagg 35741941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 65
Target Start/End: Original strand, 36990981 - 36991016
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattacagg 65  Q
    |||||||||||||||| |||||||||||||||||||    
T  36990981 acagggactaaaaccgaaattcgctaatattacagg 36991016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 65
Target Start/End: Original strand, 37016421 - 37016456
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattacagg 65  Q
    |||||||||||||||| |||||||||||||||||||    
T  37016421 acagggactaaaaccgaaattcgctaatattacagg 37016456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 85
Target Start/End: Complemental strand, 14161921 - 14161871
Alignment:
Q  36 actaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    |||||||| ||||||||||||||||||| |||||||||||  |||||||||    
T  14161921 actaaaactggaattcgctaatattacagggacgaaaagagatatttaccc 14161871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 65
Target Start/End: Original strand, 24490242 - 24490276
Alignment:
Q  31 cagggactaaaaccggaattcgctaatattacagg 65  Q
    ||||||||||||||||||||| |||||||||||||    
T  24490242 cagggactaaaaccggaattcactaatattacagg 24490276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 3424830 - 3424774
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    |||||||| |||||||||| |||||||||||||| |||| |||||| ||||| ||||    
T  3424830 acagggaccaaaaccggaaatcgctaatattacagggaccaaaagaggtattaaccc 3424774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 85
Target Start/End: Complemental strand, 14171635 - 14171587
Alignment:
Q  38 taaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    ||||| |||||||||||||||||||| ||||||||||  ||||||||||    
T  14171635 taaaatcggaattcgctaatattacagggacgaaaagtggtatttaccc 14171587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 15328519 - 15328463
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattacagg-acgaaaagatgtatttaccc 85  Q
    ||||||||||||| || ||||  ||||||||||||| ||||||||| ||||||||||    
T  15328519 acagggactaaaaacgaaatttactaatattacaggaacgaaaagaggtatttaccc 15328463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 85
Target Start/End: Original strand, 17465697 - 17465745
Alignment:
Q  38 taaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    |||||| | ||||||||||||||||| ||||||||||| ||||||||||    
T  17465697 taaaactgaaattcgctaatattacaaggacgaaaagaggtatttaccc 17465745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 82
Target Start/End: Original strand, 17649332 - 17649384
Alignment:
Q  31 cagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtattta 82  Q
    |||| |||||||||||||||||||| ||||||| || |||||||| |||||||    
T  17649332 caggaactaaaaccggaattcgctagtattacagggtcgaaaagaggtattta 17649384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 66
Target Start/End: Complemental strand, 32997263 - 32997227
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattacagga 66  Q
    ||||||||||||||||||||||  |||||||||||||    
T  32997263 acagggactaaaaccggaattccataatattacagga 32997227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 33372726 - 33372782
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattac-aggacgaaaagatgtatttaccc 85  Q
    ||||| ||||||| || ||||||||||||||||  ||||||||||| ||||||||||    
T  33372726 acaggaactaaaatcgaaattcgctaatattacggggacgaaaagaggtatttaccc 33372782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0449 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0449
Description:

Target: scaffold0449; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 7522 - 7578
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    |||||||||||||||||||||||||||||||||| ||||||||| | ||||||||||    
T  7522 acagggactaaaaccggaattcgctaatattacagggacgaaaataggtatttaccc 7578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0449; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 84
Target Start/End: Complemental strand, 7282 - 7227
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattac-aggacgaaaagatgtatttacc 84  Q
    ||||| ||||| ||| ||||||||||||||||| |||||||||||| |||||||||    
T  7282 acaggaactaacaccagaattcgctaatattacaaggacgaaaagaggtatttacc 7227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 4618 - 4562
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattac-aggacgaaaagatgtatttaccc 85  Q
    ||||||||||||| ||||||||||||||||||| |||||||||||| ||||||||||    
T  4618 acagggactaaaatcggaattcgctaatattacaaggacgaaaagaggtatttaccc 4562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 4884 - 4940
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    ||||||| ||||||||||||| |||||||||||| ||||||||||| ||||||||||    
T  4884 acagggattaaaaccggaatttgctaatattacagggacgaaaagaggtatttaccc 4940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 3925 - 3869
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    |||||||||||||||||||||||||||||||||| |||||||||||  |||||||||    
T  3925 acagggactaaaaccggaattcgctaatattacagggacgaaaagagatatttaccc 3869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 17463413 - 17463469
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    |||||||||||||||||||||||||||||||||| || |||||||| ||||||||||    
T  17463413 acagggactaaaaccggaattcgctaatattacaggggcgaaaagaggtatttaccc 17463469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 19251791 - 19251847
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattac-aggacgaaaagatgtatttaccc 85  Q
    |||||||||||||||||||||| |||||||||| |||||||||||| ||||||||||    
T  19251791 acagggactaaaaccggaattcactaatattacaaggacgaaaagaggtatttaccc 19251847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 22263515 - 22263571
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattacagg-acgaaaagatgtatttaccc 85  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  22263515 acagagactaaaaccggaattcgctaatattacaggaacgaaaagaggtatttaccc 22263571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 39878395 - 39878450
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattacaggacgaaaagatgtatttaccc 85  Q
    |||||||| ||||| ||||||||||||||||||||||| |||||| ||||||||||    
T  39878395 acagggacgaaaactggaattcgctaatattacaggacaaaaagaggtatttaccc 39878450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 32 - 85
Target Start/End: Complemental strand, 17850641 - 17850587
Alignment:
Q  32 agggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    ||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||    
T  17850641 agggactaaaatcggaattcgctaatattacagggacgaaaagaggtatttaccc 17850587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 17850908 - 17850964
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    |||| ||||||||||| ||||||||||||||||| ||||||||||| ||||||||||    
T  17850908 acagtgactaaaaccgaaattcgctaatattacagggacgaaaagaggtatttaccc 17850964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 19251527 - 19251471
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    |||||||||||||||| ||||||||||||||||| ||||||||||| ||||| ||||    
T  19251527 acagggactaaaaccgaaattcgctaatattacagggacgaaaagaggtattaaccc 19251471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 20498803 - 20498747
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    |||||||||||||||| |||||||||||||||||  |||||||||| ||||||||||    
T  20498803 acagggactaaaaccgtaattcgctaatattacatagacgaaaagaggtatttaccc 20498747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 23806274 - 23806330
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    |||||||||||||||| ||||||||||||||||| |||| |||||| ||||||||||    
T  23806274 acagggactaaaaccgaaattcgctaatattacagggacaaaaagaggtatttaccc 23806330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 23854744 - 23854688
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    |||||||||||||||| ||||||||||||||||| ||||||||||| ||||| ||||    
T  23854744 acagggactaaaaccgaaattcgctaatattacagggacgaaaagaggtattaaccc 23854688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 26236183 - 26236127
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattac-aggacgaaaagatgtatttaccc 85  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||  |||||||||    
T  26236183 acagggactaaaaccagaattcgctaatattacaaggacgaaaagagatatttaccc 26236127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 34 - 85
Target Start/End: Original strand, 26236420 - 26236472
Alignment:
Q  34 ggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    |||||||||||| ||||||||||||||||| ||||||||||| ||||||||||    
T  26236420 ggactaaaaccgaaattcgctaatattacagggacgaaaagaggtatttaccc 26236472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 33 - 84
Target Start/End: Original strand, 26560880 - 26560932
Alignment:
Q  33 gggactaaaaccggaattcgctaatattac-aggacgaaaagatgtatttacc 84  Q
    |||||||||| ||||||||||||||||||| |||||||||||| |||||||||    
T  26560880 gggactaaaatcggaattcgctaatattacaaggacgaaaagaggtatttacc 26560932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 42670773 - 42670717
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||| ||||| ||||    
T  42670773 acagggactaaaaccggaattcgctactattacagggacgaaaagaggtattaaccc 42670717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 23855025 - 23855072
Alignment:
Q  39 aaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  23855025 aaaaccggaattcgctaatattacagggacgaaaagaggtatttaccc 23855072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 30 - 75
Target Start/End: Complemental strand, 26135873 - 26135827
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagat 75  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||||    
T  26135873 acagggactaaaatcggaattcgctaatattacagggacgaaaagat 26135827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 65
Target Start/End: Original strand, 12419046 - 12419079
Alignment:
Q  32 agggactaaaaccggaattcgctaatattacagg 65  Q
    ||||||||||||||||||||||||||||||||||    
T  12419046 agggactaaaaccggaattcgctaatattacagg 12419079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 65
Target Start/End: Original strand, 12431106 - 12431139
Alignment:
Q  32 agggactaaaaccggaattcgctaatattacagg 65  Q
    ||||||||||||||||||||||||||||||||||    
T  12431106 agggactaaaaccggaattcgctaatattacagg 12431139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 74
Target Start/End: Original strand, 13254758 - 13254803
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaaga 74  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||    
T  13254758 acagagactaaaaccggaattcgctaatattacagggacgaaaaga 13254803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 63
Target Start/End: Complemental strand, 39878158 - 39878125
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca 63  Q
    ||||||||||||||||||||||||||||||||||    
T  39878158 acagggactaaaaccggaattcgctaatattaca 39878125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 15106387 - 15106443
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattac-aggacgaaaagatgtatttaccc 85  Q
    ||||||||||||| || ||||||||||||||||  ||||||||||| ||||||||||    
T  15106387 acagggactaaaatcgaaattcgctaatattacggggacgaaaagaggtatttaccc 15106443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 17463148 - 17463092
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    |||| ||||||||||||||||||||||||||| | |||||||||||  |||||||||    
T  17463148 acagcgactaaaaccggaattcgctaatattatagggacgaaaagaactatttaccc 17463092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 85
Target Start/End: Original strand, 26136143 - 26136195
Alignment:
Q  34 ggactaaaaccggaattcgctaatattac-aggacgaaaagatgtatttaccc 85  Q
    |||||||||||| |||||| ||||||||| |||||||||||| ||||||||||    
T  26136143 ggactaaaaccgaaattcgttaatattacaaggacgaaaagaggtatttaccc 26136195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 34548630 - 34548574
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    |||||||||||||||  ||||| ||||||||||| ||||||||||| ||||||||||    
T  34548630 acagggactaaaaccaaaattcactaatattacagggacgaaaagaagtatttaccc 34548574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 65
Target Start/End: Original strand, 13284735 - 13284770
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattacagg 65  Q
    |||||||||||||||| |||||||||||||||||||    
T  13284735 acagggactaaaaccgaaattcgctaatattacagg 13284770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 23046754 - 23046707
Alignment:
Q  39 aaaaccggaattcgctaatattac-aggacgaaaagatgtatttaccc 85  Q
    |||||||||||||||| ||||||| |||||||||||| ||||||||||    
T  23046754 aaaaccggaattcgctcatattacaaggacgaaaagaggtatttaccc 23046707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 65
Target Start/End: Complemental strand, 30958740 - 30958705
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattacagg 65  Q
    |||||||||||||||| |||||||||||||||||||    
T  30958740 acagggactaaaaccgaaattcgctaatattacagg 30958705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 65
Target Start/End: Original strand, 30959997 - 30960028
Alignment:
Q  34 ggactaaaaccggaattcgctaatattacagg 65  Q
    ||||||||||||||||||||||||||||||||    
T  30959997 ggactaaaaccggaattcgctaatattacagg 30960028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 65
Target Start/End: Complemental strand, 33290105 - 33290070
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattacagg 65  Q
    |||||||||||||| |||||||||||||||||||||    
T  33290105 acagggactaaaactggaattcgctaatattacagg 33290070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 80
Target Start/End: Original strand, 44999435 - 44999481
Alignment:
Q  34 ggactaaaaccggaattcgctaatattacaggacgaaaagatgtatt 80  Q
    ||||||||| | |||||||||||||||||| |||||||||| |||||    
T  44999435 ggactaaaatcagaattcgctaatattacatgacgaaaagaggtatt 44999481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 74
Target Start/End: Complemental strand, 30390515 - 30390470
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaaga 74  Q
    ||||||| ||||| |||||||||||||||||||| |||||||||||    
T  30390515 acagggattaaaatcggaattcgctaatattacatggacgaaaaga 30390470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 13254553 - 13254497
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattacagg-acgaaaagatgtatttaccc 85  Q
    ||||||| |||||||  ||||||||||||||||||| ||| ||||| ||||||||||    
T  13254553 acagggagtaaaaccaaaattcgctaatattacaggaacggaaagaggtatttaccc 13254497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 15106123 - 15106067
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattac-aggacgaaaagatgtatttaccc 85  Q
    ||||||| |||||||| ||||||||||||||||  |||||||||||  |||||||||    
T  15106123 acagggattaaaaccgaaattcgctaatattacggggacgaaaagagatatttaccc 15106067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 23047904 - 23047960
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    |||||||  |||||||||||||||| |||||||| ||||||||| | ||||||||||    
T  23047904 acagggagcaaaaccggaattcgctcatattacagggacgaaaataggtatttaccc 23047960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 42671041 - 42671097
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    |||||||||||||| | |||||||||||| |||| |||| |||||| ||||||||||    
T  42671041 acagggactaaaactgaaattcgctaatactacagggacaaaaagaggtatttaccc 42671097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 83
Target Start/End: Complemental strand, 44999398 - 44999354
Alignment:
Q  40 aaaccggaattcgctaatattaca-ggacgaaaagatgtatttac 83  Q
    ||||| |||||||||||||||||| |||||||||||| |||||||    
T  44999398 aaaccagaattcgctaatattacatggacgaaaagatatatttac 44999354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 85
Target Start/End: Complemental strand, 8378 - 8325
Alignment:
Q  33 gggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    ||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||    
T  8378 gggactaaaaccgaaattcgctaatattacagggacgaaaagaggtatttaccc 8325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 66
Target Start/End: Original strand, 8646 - 8680
Alignment:
Q  32 agggactaaaaccggaattcgctaatattacagga 66  Q
    ||||||||||||||||||||||||||||| |||||    
T  8646 agggactaaaaccggaattcgctaatattgcagga 8680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 12306 - 12355
Alignment:
Q  32 agggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatt 80  Q
    |||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  12306 agggactaaaaccggaattcgctaatattacagggacgaaaagaggtatt 12355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 15950 - 16006
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||  |||||||||    
T  15950 acagagactaaaaccggaattcgctaatattacatggacgaaaagagatatttaccc 16006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 32 - 85
Target Start/End: Original strand, 1730 - 1784
Alignment:
Q  32 agggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    ||||||||||||||||||||| |||||||||| ||||||||||| | ||||||||    
T  1730 agggactaaaaccggaattcgttaatattacagggacgaaaagagggatttaccc 1784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0477 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 85
Target Start/End: Complemental strand, 4932 - 4880
Alignment:
Q  34 ggactaaaaccggaattcgctaatattacagg-acgaaaagatgtatttaccc 85  Q
    |||||||||||| ||||||||||||||||||| || |||||| ||||||||||    
T  4932 ggactaaaaccgaaattcgctaatattacaggaacaaaaagaggtatttaccc 4880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0477; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 73
Target Start/End: Original strand, 5073 - 5113
Alignment:
Q  34 ggactaaaaccggaattcgctaatattaca-ggacgaaaag 73  Q
    |||| ||||||||||||||||||||||||| ||||||||||    
T  5073 ggacaaaaaccggaattcgctaatattacatggacgaaaag 5113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 6001 - 6057
Alignment:
Q  30 acagggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    ||||||||||||| ||||||||||||||||| || |||| |||||| ||||||||||    
T  6001 acagggactaaaatcggaattcgctaatattgcagggaccaaaagaggtatttaccc 6057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 85
Target Start/End: Complemental strand, 4721 - 4667
Alignment:
Q  32 agggactaaaaccggaattcgctaatattaca-ggacgaaaagatgtatttaccc 85  Q
    |||||||||||| |||||||||||||||| || |||| |||||| ||||||||||    
T  4721 agggactaaaactggaattcgctaatattgcagggactaaaagaggtatttaccc 4667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University