View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17688_high_30 (Length: 206)
Name: NF17688_high_30
Description: NF17688
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17688_high_30 |
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Alignment Details
Target: chr8 (Bit Score: 166; Significance: 5e-89; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 16 - 185
Target Start/End: Original strand, 39228866 - 39229035
Alignment:
| Q |
16 |
ataatacttgtatttgtatggactaaaaattgtaggcaaccatgttttgttgtacatctgaaagtttcaactttccctgtctaaaaaacacaacagacac |
115 |
Q |
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| T |
39228866 |
ataatacttgtatttgtatggactaaaaattgtaggcaaccatgttttgttctacatctgaaagtttcaactttccctgtctaaaaaacacaacagacac |
39228965 |
T |
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| Q |
116 |
cactcgaactaggaatgaggcaaagatgtcacacaatggctatattgtgaagcaattatatgtagagtgt |
185 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39228966 |
cactcgaactaggaatgaggcaaagatgtcacacaatggctatattgtgaagcaattatatgtagagtgt |
39229035 |
T |
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