View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17689_low_28 (Length: 209)

Name: NF17689_low_28
Description: NF17689
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17689_low_28
NF17689_low_28
[»] chr5 (11 HSPs)
chr5 (1-187)||(19271693-19271881)
chr5 (21-91)||(19271478-19271550)
chr5 (11-89)||(34173398-34173478)
chr5 (164-194)||(42825165-42825195)
chr5 (164-193)||(13734392-13734421)
chr5 (165-194)||(20125389-20125418)
chr5 (165-194)||(34952448-34952477)
chr5 (163-191)||(6865821-6865849)
chr5 (165-193)||(30334798-30334826)
chr5 (163-191)||(36713223-36713251)
chr5 (163-191)||(43057433-43057461)
[»] chr6 (6 HSPs)
chr6 (1-89)||(5265336-5265426)
chr6 (43-89)||(3778733-3778779)
chr6 (164-194)||(3821377-3821407)
chr6 (164-193)||(1897696-1897725)
chr6 (11-89)||(19600149-19600229)
chr6 (162-194)||(30622021-30622053)
[»] chr2 (11 HSPs)
chr2 (4-83)||(12746099-12746180)
chr2 (163-194)||(546427-546458)
chr2 (20-83)||(14887412-14887477)
chr2 (164-193)||(8482264-8482293)
chr2 (109-163)||(15441980-15442036)
chr2 (164-193)||(34442112-34442141)
chr2 (165-194)||(42554776-42554805)
chr2 (164-193)||(44189826-44189855)
chr2 (163-191)||(6365184-6365212)
chr2 (163-191)||(13553145-13553173)
chr2 (163-191)||(23880093-23880121)
[»] chr7 (8 HSPs)
chr7 (11-89)||(22621265-22621345)
chr7 (20-80)||(39824276-39824338)
chr7 (165-194)||(17500697-17500726)
chr7 (165-194)||(17552488-17552517)
chr7 (164-193)||(31785503-31785532)
chr7 (163-191)||(30941176-30941204)
chr7 (163-191)||(43079677-43079705)
chr7 (165-193)||(43444635-43444663)
[»] chr8 (8 HSPs)
chr8 (21-90)||(2552151-2552221)
chr8 (163-193)||(8074767-8074797)
chr8 (164-194)||(34996402-34996432)
chr8 (164-194)||(41305024-41305054)
chr8 (165-193)||(295545-295573)
chr8 (163-191)||(3988903-3988931)
chr8 (163-191)||(5502369-5502397)
chr8 (163-191)||(40102021-40102049)
[»] chr1 (13 HSPs)
chr1 (162-194)||(44641945-44641977)
chr1 (164-194)||(44112453-44112483)
chr1 (164-194)||(49590005-49590035)
chr1 (165-194)||(8464555-8464584)
chr1 (165-194)||(30530441-30530470)
chr1 (165-194)||(34002362-34002391)
chr1 (165-194)||(42792300-42792329)
chr1 (164-193)||(48872378-48872407)
chr1 (166-194)||(11068426-11068454)
chr1 (165-193)||(29264015-29264043)
chr1 (163-191)||(31428002-31428030)
chr1 (163-191)||(31436818-31436846)
chr1 (163-191)||(49425736-49425764)
[»] scaffold0504 (1 HSPs)
scaffold0504 (163-194)||(10777-10808)
[»] chr4 (14 HSPs)
chr4 (163-194)||(31147229-31147260)
chr4 (164-194)||(10096784-10096814)
chr4 (163-193)||(30973595-30973625)
chr4 (164-194)||(42516649-42516679)
chr4 (164-194)||(51397913-51397943)
chr4 (160-193)||(12074194-12074227)
chr4 (165-194)||(25139997-25140026)
chr4 (162-191)||(41119515-41119544)
chr4 (162-191)||(46355338-46355367)
chr4 (165-194)||(46912841-46912870)
chr4 (163-191)||(26440674-26440702)
chr4 (163-191)||(34116585-34116613)
chr4 (165-193)||(35332706-35332734)
chr4 (163-191)||(45277126-45277154)
[»] chr3 (11 HSPs)
chr3 (164-195)||(24748594-24748625)
chr3 (163-194)||(44334843-44334874)
chr3 (163-193)||(28300691-28300721)
chr3 (164-194)||(43900799-43900829)
chr3 (163-193)||(46315998-46316028)
chr3 (164-193)||(43499604-43499633)
chr3 (163-191)||(34271535-34271563)
chr3 (163-191)||(34607965-34607993)
chr3 (163-191)||(41877656-41877684)
chr3 (163-191)||(43409407-43409435)
chr3 (163-191)||(48490547-48490575)
[»] scaffold0014 (1 HSPs)
scaffold0014 (164-194)||(199265-199295)
[»] scaffold0238 (1 HSPs)
scaffold0238 (165-194)||(16387-16416)
[»] scaffold0148 (1 HSPs)
scaffold0148 (164-193)||(9452-9481)
[»] scaffold0130 (1 HSPs)
scaffold0130 (164-193)||(25702-25731)


Alignment Details
Target: chr5 (Bit Score: 162; Significance: 1e-86; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 19271693 - 19271881
Alignment:
Q  1 gtttagggatcaaaatgatcattttctactttcact--agtccatatggcacctcatgcaccttgttagcacaaaacatttgtcatctcattatcagaag 98  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19271693 gtttagggatcaaaatgatcattttctactttcactttagtccatatgatacctcatgcaccttgttagcacaaaacatttgtcatctcattatcagaag 19271792  T
Q  99 ttgttaacgatagagactaaattgataataaaaaagcatattcaaggactattgtatttaatcctagagaaatgatatttgtacaacca 187  Q
    || |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19271793 tttttaacgatagagtctaaattgataataaaaaagcatattcaaggactattgtatttaatcctagagaaatgatatttgtacaacca 19271881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 91
Target Start/End: Complemental strand, 19271550 - 19271478
Alignment:
Q  21 attttctactttcact--agtccatatggcacctcatgcaccttgttagcacaaaacatttgtcatctcatta 91  Q
    ||||||||||||||||  ||||| | |  ||||||||||||||||||||| ||||||||| |||| |||||||    
T  19271550 attttctactttcactttagtccttctaacacctcatgcaccttgttagcccaaaacattggtcacctcatta 19271478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 34173478 - 34173398
Alignment:
Q  11 caaaatgatcattttctactttcact--agtccatatggcacctcatgcaccttgttagcacaaaacatttgtcatctcat 89  Q
    |||| ||||||||||||||||||| |  ||||| | ||  |||| ||||||||||| |||||||||||||||||| |||||    
T  34173478 caaagtgatcattttctactttcagtttagtccctgtgataccttatgcaccttgtcagcacaaaacatttgtcacctcat 34173398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 194
Target Start/End: Original strand, 42825165 - 42825195
Alignment:
Q  164 agagaaatgatatttgtacaaccactttatt 194  Q
    |||||||||||||||||||||||||||||||    
T  42825165 agagaaatgatatttgtacaaccactttatt 42825195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 164 - 193
Target Start/End: Complemental strand, 13734421 - 13734392
Alignment:
Q  164 agagaaatgatatttgtacaaccactttat 193  Q
    ||||||||||||||||||||||||||||||    
T  13734421 agagaaatgatatttgtacaaccactttat 13734392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 165 - 194
Target Start/End: Original strand, 20125389 - 20125418
Alignment:
Q  165 gagaaatgatatttgtacaaccactttatt 194  Q
    ||||||||||||||||||||||||||||||    
T  20125389 gagaaatgatatttgtacaaccactttatt 20125418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 165 - 194
Target Start/End: Complemental strand, 34952477 - 34952448
Alignment:
Q  165 gagaaatgatatttgtacaaccactttatt 194  Q
    ||||||||||||||||||||||||||||||    
T  34952477 gagaaatgatatttgtacaaccactttatt 34952448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 191
Target Start/End: Complemental strand, 6865849 - 6865821
Alignment:
Q  163 tagagaaatgatatttgtacaaccacttt 191  Q
    |||||||||||||||||||||||||||||    
T  6865849 tagagaaatgatatttgtacaaccacttt 6865821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 193
Target Start/End: Complemental strand, 30334826 - 30334798
Alignment:
Q  165 gagaaatgatatttgtacaaccactttat 193  Q
    |||||||||||||||||||||||||||||    
T  30334826 gagaaatgatatttgtacaaccactttat 30334798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 191
Target Start/End: Complemental strand, 36713251 - 36713223
Alignment:
Q  163 tagagaaatgatatttgtacaaccacttt 191  Q
    |||||||||||||||||||||||||||||    
T  36713251 tagagaaatgatatttgtacaaccacttt 36713223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 191
Target Start/End: Original strand, 43057433 - 43057461
Alignment:
Q  163 tagagaaatgatatttgtacaaccacttt 191  Q
    |||||||||||||||||||||||||||||    
T  43057433 tagagaaatgatatttgtacaaccacttt 43057461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 2e-23; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 5265426 - 5265336
Alignment:
Q  1 gtttagggatcaaaatgatcattttctactttcact--agtccatatggcacctcatgcaccttgttagcacaaaacatttgtcatctcat 89  Q
    ||||||||||||||||||| ||||| ||||||||||  | ||||| || |||||||||||||||||||||||||||||||||||| |||||    
T  5265426 gtttagggatcaaaatgattattttttactttcactttactccatgtgacacctcatgcaccttgttagcacaaaacatttgtcacctcat 5265336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 89
Target Start/End: Original strand, 3778733 - 3778779
Alignment:
Q  43 tatggcacctcatgcaccttgttagcacaaaacatttgtcatctcat 89  Q
    |||||||| ||||  |||||||||||||||||||||||||| |||||    
T  3778733 tatggcacatcatttaccttgttagcacaaaacatttgtcaactcat 3778779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 194
Target Start/End: Original strand, 3821377 - 3821407
Alignment:
Q  164 agagaaatgatatttgtacaaccactttatt 194  Q
    |||||||||||||||||||||||||||||||    
T  3821377 agagaaatgatatttgtacaaccactttatt 3821407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 164 - 193
Target Start/End: Original strand, 1897696 - 1897725
Alignment:
Q  164 agagaaatgatatttgtacaaccactttat 193  Q
    ||||||||||||||||||||||||||||||    
T  1897696 agagaaatgatatttgtacaaccactttat 1897725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 19600149 - 19600229
Alignment:
Q  11 caaaatgatcattttctactttcact--agtccatatggcacctcatgcaccttgttagcacaaaacatttgtcatctcat 89  Q
    |||| ||| |||||||||||||||||  ||||| | || ||  ||||||||||||| | |||||||||||||||| |||||    
T  19600149 caaagtgaccattttctactttcactttagtccctgtgacatttcatgcaccttgtcaccacaaaacatttgtcacctcat 19600229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 194
Target Start/End: Original strand, 30622021 - 30622053
Alignment:
Q  162 ctagagaaatgatatttgtacaaccactttatt 194  Q
    |||||||||||||||||||||||| ||||||||    
T  30622021 ctagagaaatgatatttgtacaactactttatt 30622053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 35; Significance: 0.00000000007; HSPs: 11)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 4 - 83
Target Start/End: Original strand, 12746099 - 12746180
Alignment:
Q  4 tagggatcaaaatgatcattttctactttcac--tagtccatatggcacctcatgcaccttgttagcacaaaacatttgtca 83  Q
    ||||||||||||||||||||||||||||||||  |||||| | || |||||||| | | |||| |||| ||||| |||||||    
T  12746099 tagggatcaaaatgatcattttctactttcactttagtccctgtgacacctcatactctttgtcagcataaaacttttgtca 12746180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 163 - 194
Target Start/End: Complemental strand, 546458 - 546427
Alignment:
Q  163 tagagaaatgatatttgtacaaccactttatt 194  Q
    ||||||||||||||||||||||||||||||||    
T  546458 tagagaaatgatatttgtacaaccactttatt 546427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 14887412 - 14887477
Alignment:
Q  20 cattttctactttcact--agtccatatggcacctcatgcaccttgttagcacaaaacatttgtca 83  Q
    |||||||||||||||||  ||||| | || |||||||| | ||||||||||| |||||||||||||    
T  14887412 cattttctactttcactttagtccctgtgacacctcatactccttgttagcataaaacatttgtca 14887477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 164 - 193
Target Start/End: Complemental strand, 8482293 - 8482264
Alignment:
Q  164 agagaaatgatatttgtacaaccactttat 193  Q
    ||||||||||||||||||||||||||||||    
T  8482293 agagaaatgatatttgtacaaccactttat 8482264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 109 - 163
Target Start/End: Original strand, 15441980 - 15442036
Alignment:
Q  109 tagagactaaattgataataaaaaagcatattcaaggacta--ttgtatttaatcct 163  Q
    ||||||||||| |||||||||||  ||| ||||||||||||  ||||||||||||||    
T  15441980 tagagactaaagtgataataaaagtgcacattcaaggactactttgtatttaatcct 15442036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 164 - 193
Target Start/End: Original strand, 34442112 - 34442141
Alignment:
Q  164 agagaaatgatatttgtacaaccactttat 193  Q
    ||||||||||||||||||||||||||||||    
T  34442112 agagaaatgatatttgtacaaccactttat 34442141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 165 - 194
Target Start/End: Original strand, 42554776 - 42554805
Alignment:
Q  165 gagaaatgatatttgtacaaccactttatt 194  Q
    ||||||||||||||||||||||||||||||    
T  42554776 gagaaatgatatttgtacaaccactttatt 42554805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 164 - 193
Target Start/End: Original strand, 44189826 - 44189855
Alignment:
Q  164 agagaaatgatatttgtacaaccactttat 193  Q
    ||||||||||||||||||||||||||||||    
T  44189826 agagaaatgatatttgtacaaccactttat 44189855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 191
Target Start/End: Original strand, 6365184 - 6365212
Alignment:
Q  163 tagagaaatgatatttgtacaaccacttt 191  Q
    |||||||||||||||||||||||||||||    
T  6365184 tagagaaatgatatttgtacaaccacttt 6365212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 191
Target Start/End: Original strand, 13553145 - 13553173
Alignment:
Q  163 tagagaaatgatatttgtacaaccacttt 191  Q
    |||||||||||||||||||||||||||||    
T  13553145 tagagaaatgatatttgtacaaccacttt 13553173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 191
Target Start/End: Original strand, 23880093 - 23880121
Alignment:
Q  163 tagagaaatgatatttgtacaaccacttt 191  Q
    |||||||||||||||||||||||||||||    
T  23880093 tagagaaatgatatttgtacaaccacttt 23880121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 34; Significance: 0.0000000003; HSPs: 8)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 22621345 - 22621265
Alignment:
Q  11 caaaatgatcattttctactttcact--agtccatatggcacctcatgcaccttgttagcacaaaacatttgtcatctcat 89  Q
    |||| |||||||||||||||||||||  ||||| | || ||| |||||| |||||| |||| ||||||||||||| |||||    
T  22621345 caaagtgatcattttctactttcactttagtccttgtgacacatcatgcgccttgtcagcaaaaaacatttgtcaactcat 22621265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 20 - 80
Target Start/End: Complemental strand, 39824338 - 39824276
Alignment:
Q  20 cattttctactttcact--agtccatatggcacctcatgcaccttgttagcacaaaacatttg 80  Q
    |||||||||||||||||  ||||| | || ||| ||||||||||||| |||||||||||||||    
T  39824338 cattttctactttcactttagtccctgtgacacttcatgcaccttgtcagcacaaaacatttg 39824276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 165 - 194
Target Start/End: Original strand, 17500697 - 17500726
Alignment:
Q  165 gagaaatgatatttgtacaaccactttatt 194  Q
    ||||||||||||||||||||||||||||||    
T  17500697 gagaaatgatatttgtacaaccactttatt 17500726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 165 - 194
Target Start/End: Complemental strand, 17552517 - 17552488
Alignment:
Q  165 gagaaatgatatttgtacaaccactttatt 194  Q
    ||||||||||||||||||||||||||||||    
T  17552517 gagaaatgatatttgtacaaccactttatt 17552488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 164 - 193
Target Start/End: Complemental strand, 31785532 - 31785503
Alignment:
Q  164 agagaaatgatatttgtacaaccactttat 193  Q
    ||||||||||||||||||||||||||||||    
T  31785532 agagaaatgatatttgtacaaccactttat 31785503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 191
Target Start/End: Original strand, 30941176 - 30941204
Alignment:
Q  163 tagagaaatgatatttgtacaaccacttt 191  Q
    |||||||||||||||||||||||||||||    
T  30941176 tagagaaatgatatttgtacaaccacttt 30941204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 191
Target Start/End: Complemental strand, 43079705 - 43079677
Alignment:
Q  163 tagagaaatgatatttgtacaaccacttt 191  Q
    |||||||||||||||||||||||||||||    
T  43079705 tagagaaatgatatttgtacaaccacttt 43079677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 193
Target Start/End: Original strand, 43444635 - 43444663
Alignment:
Q  165 gagaaatgatatttgtacaaccactttat 193  Q
    |||||||||||||||||||||||||||||    
T  43444635 gagaaatgatatttgtacaaccactttat 43444663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 33; Significance: 0.000000001; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 90
Target Start/End: Complemental strand, 2552221 - 2552151
Alignment:
Q  21 attttctactttcact--agtccatatggcacctcatgcaccttgttagcacaaaacatttgtcatctcatt 90  Q
    ||||||||||||||||  ||||| | || ||||||||| | |||||||||||||||||||||||| ||||||    
T  2552221 attttctactttcactttagtcc-tgtgacacctcatgaatcttgttagcacaaaacatttgtcacctcatt 2552151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 193
Target Start/End: Complemental strand, 8074797 - 8074767
Alignment:
Q  163 tagagaaatgatatttgtacaaccactttat 193  Q
    |||||||||||||||||||||||||||||||    
T  8074797 tagagaaatgatatttgtacaaccactttat 8074767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 194
Target Start/End: Complemental strand, 34996432 - 34996402
Alignment:
Q  164 agagaaatgatatttgtacaaccactttatt 194  Q
    |||||||||||||||||||||||||||||||    
T  34996432 agagaaatgatatttgtacaaccactttatt 34996402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 194
Target Start/End: Complemental strand, 41305054 - 41305024
Alignment:
Q  164 agagaaatgatatttgtacaaccactttatt 194  Q
    |||||||||||||||||||||||||||||||    
T  41305054 agagaaatgatatttgtacaaccactttatt 41305024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 193
Target Start/End: Original strand, 295545 - 295573
Alignment:
Q  165 gagaaatgatatttgtacaaccactttat 193  Q
    |||||||||||||||||||||||||||||    
T  295545 gagaaatgatatttgtacaaccactttat 295573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 191
Target Start/End: Original strand, 3988903 - 3988931
Alignment:
Q  163 tagagaaatgatatttgtacaaccacttt 191  Q
    |||||||||||||||||||||||||||||    
T  3988903 tagagaaatgatatttgtacaaccacttt 3988931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 191
Target Start/End: Original strand, 5502369 - 5502397
Alignment:
Q  163 tagagaaatgatatttgtacaaccacttt 191  Q
    |||||||||||||||||||||||||||||    
T  5502369 tagagaaatgatatttgtacaaccacttt 5502397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 191
Target Start/End: Original strand, 40102021 - 40102049
Alignment:
Q  163 tagagaaatgatatttgtacaaccacttt 191  Q
    |||||||||||||||||||||||||||||    
T  40102021 tagagaaatgatatttgtacaaccacttt 40102049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 33; Significance: 0.000000001; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 194
Target Start/End: Complemental strand, 44641977 - 44641945
Alignment:
Q  162 ctagagaaatgatatttgtacaaccactttatt 194  Q
    |||||||||||||||||||||||||||||||||    
T  44641977 ctagagaaatgatatttgtacaaccactttatt 44641945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 194
Target Start/End: Original strand, 44112453 - 44112483
Alignment:
Q  164 agagaaatgatatttgtacaaccactttatt 194  Q
    |||||||||||||||||||||||||||||||    
T  44112453 agagaaatgatatttgtacaaccactttatt 44112483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 194
Target Start/End: Complemental strand, 49590035 - 49590005
Alignment:
Q  164 agagaaatgatatttgtacaaccactttatt 194  Q
    |||||||||||||||||||||||||||||||    
T  49590035 agagaaatgatatttgtacaaccactttatt 49590005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 165 - 194
Target Start/End: Complemental strand, 8464584 - 8464555
Alignment:
Q  165 gagaaatgatatttgtacaaccactttatt 194  Q
    ||||||||||||||||||||||||||||||    
T  8464584 gagaaatgatatttgtacaaccactttatt 8464555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 165 - 194
Target Start/End: Complemental strand, 30530470 - 30530441
Alignment:
Q  165 gagaaatgatatttgtacaaccactttatt 194  Q
    ||||||||||||||||||||||||||||||    
T  30530470 gagaaatgatatttgtacaaccactttatt 30530441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 165 - 194
Target Start/End: Complemental strand, 34002391 - 34002362
Alignment:
Q  165 gagaaatgatatttgtacaaccactttatt 194  Q
    ||||||||||||||||||||||||||||||    
T  34002391 gagaaatgatatttgtacaaccactttatt 34002362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 165 - 194
Target Start/End: Original strand, 42792300 - 42792329
Alignment:
Q  165 gagaaatgatatttgtacaaccactttatt 194  Q
    ||||||||||||||||||||||||||||||    
T  42792300 gagaaatgatatttgtacaaccactttatt 42792329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 164 - 193
Target Start/End: Original strand, 48872378 - 48872407
Alignment:
Q  164 agagaaatgatatttgtacaaccactttat 193  Q
    ||||||||||||||||||||||||||||||    
T  48872378 agagaaatgatatttgtacaaccactttat 48872407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 194
Target Start/End: Original strand, 11068426 - 11068454
Alignment:
Q  166 agaaatgatatttgtacaaccactttatt 194  Q
    |||||||||||||||||||||||||||||    
T  11068426 agaaatgatatttgtacaaccactttatt 11068454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 193
Target Start/End: Original strand, 29264015 - 29264043
Alignment:
Q  165 gagaaatgatatttgtacaaccactttat 193  Q
    |||||||||||||||||||||||||||||    
T  29264015 gagaaatgatatttgtacaaccactttat 29264043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 191
Target Start/End: Complemental strand, 31428030 - 31428002
Alignment:
Q  163 tagagaaatgatatttgtacaaccacttt 191  Q
    |||||||||||||||||||||||||||||    
T  31428030 tagagaaatgatatttgtacaaccacttt 31428002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 191
Target Start/End: Original strand, 31436818 - 31436846
Alignment:
Q  163 tagagaaatgatatttgtacaaccacttt 191  Q
    |||||||||||||||||||||||||||||    
T  31436818 tagagaaatgatatttgtacaaccacttt 31436846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 191
Target Start/End: Original strand, 49425736 - 49425764
Alignment:
Q  163 tagagaaatgatatttgtacaaccacttt 191  Q
    |||||||||||||||||||||||||||||    
T  49425736 tagagaaatgatatttgtacaaccacttt 49425764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0504 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 163 - 194
Target Start/End: Complemental strand, 10808 - 10777
Alignment:
Q  163 tagagaaatgatatttgtacaaccactttatt 194  Q
    ||||||||||||||||||||||||||||||||    
T  10808 tagagaaatgatatttgtacaaccactttatt 10777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 32; Significance: 0.000000004; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 163 - 194
Target Start/End: Original strand, 31147229 - 31147260
Alignment:
Q  163 tagagaaatgatatttgtacaaccactttatt 194  Q
    ||||||||||||||||||||||||||||||||    
T  31147229 tagagaaatgatatttgtacaaccactttatt 31147260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 194
Target Start/End: Complemental strand, 10096814 - 10096784
Alignment:
Q  164 agagaaatgatatttgtacaaccactttatt 194  Q
    |||||||||||||||||||||||||||||||    
T  10096814 agagaaatgatatttgtacaaccactttatt 10096784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 193
Target Start/End: Original strand, 30973595 - 30973625
Alignment:
Q  163 tagagaaatgatatttgtacaaccactttat 193  Q
    |||||||||||||||||||||||||||||||    
T  30973595 tagagaaatgatatttgtacaaccactttat 30973625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 194
Target Start/End: Original strand, 42516649 - 42516679
Alignment:
Q  164 agagaaatgatatttgtacaaccactttatt 194  Q
    |||||||||||||||||||||||||||||||    
T  42516649 agagaaatgatatttgtacaaccactttatt 42516679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 194
Target Start/End: Complemental strand, 51397943 - 51397913
Alignment:
Q  164 agagaaatgatatttgtacaaccactttatt 194  Q
    |||||||||||||||||||||||||||||||    
T  51397943 agagaaatgatatttgtacaaccactttatt 51397913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 160 - 193
Target Start/End: Complemental strand, 12074227 - 12074194
Alignment:
Q  160 tcctagagaaatgatatttgtacaaccactttat 193  Q
    |||||||||||||||||||||||||||| |||||    
T  12074227 tcctagagaaatgatatttgtacaaccattttat 12074194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 165 - 194
Target Start/End: Complemental strand, 25140026 - 25139997
Alignment:
Q  165 gagaaatgatatttgtacaaccactttatt 194  Q
    ||||||||||||||||||||||||||||||    
T  25140026 gagaaatgatatttgtacaaccactttatt 25139997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 162 - 191
Target Start/End: Complemental strand, 41119544 - 41119515
Alignment:
Q  162 ctagagaaatgatatttgtacaaccacttt 191  Q
    ||||||||||||||||||||||||||||||    
T  41119544 ctagagaaatgatatttgtacaaccacttt 41119515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 162 - 191
Target Start/End: Complemental strand, 46355367 - 46355338
Alignment:
Q  162 ctagagaaatgatatttgtacaaccacttt 191  Q
    ||||||||||||||||||||||||||||||    
T  46355367 ctagagaaatgatatttgtacaaccacttt 46355338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 165 - 194
Target Start/End: Complemental strand, 46912870 - 46912841
Alignment:
Q  165 gagaaatgatatttgtacaaccactttatt 194  Q
    ||||||||||||||||||||||||||||||    
T  46912870 gagaaatgatatttgtacaaccactttatt 46912841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 191
Target Start/End: Original strand, 26440674 - 26440702
Alignment:
Q  163 tagagaaatgatatttgtacaaccacttt 191  Q
    |||||||||||||||||||||||||||||    
T  26440674 tagagaaatgatatttgtacaaccacttt 26440702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 191
Target Start/End: Complemental strand, 34116613 - 34116585
Alignment:
Q  163 tagagaaatgatatttgtacaaccacttt 191  Q
    |||||||||||||||||||||||||||||    
T  34116613 tagagaaatgatatttgtacaaccacttt 34116585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 193
Target Start/End: Original strand, 35332706 - 35332734
Alignment:
Q  165 gagaaatgatatttgtacaaccactttat 193  Q
    |||||||||||||||||||||||||||||    
T  35332706 gagaaatgatatttgtacaaccactttat 35332734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 191
Target Start/End: Complemental strand, 45277154 - 45277126
Alignment:
Q  163 tagagaaatgatatttgtacaaccacttt 191  Q
    |||||||||||||||||||||||||||||    
T  45277154 tagagaaatgatatttgtacaaccacttt 45277126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 32; Significance: 0.000000004; HSPs: 11)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 164 - 195
Target Start/End: Original strand, 24748594 - 24748625
Alignment:
Q  164 agagaaatgatatttgtacaaccactttattg 195  Q
    ||||||||||||||||||||||||||||||||    
T  24748594 agagaaatgatatttgtacaaccactttattg 24748625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 163 - 194
Target Start/End: Complemental strand, 44334874 - 44334843
Alignment:
Q  163 tagagaaatgatatttgtacaaccactttatt 194  Q
    ||||||||||||||||||||||||||||||||    
T  44334874 tagagaaatgatatttgtacaaccactttatt 44334843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 193
Target Start/End: Complemental strand, 28300721 - 28300691
Alignment:
Q  163 tagagaaatgatatttgtacaaccactttat 193  Q
    |||||||||||||||||||||||||||||||    
T  28300721 tagagaaatgatatttgtacaaccactttat 28300691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 194
Target Start/End: Complemental strand, 43900829 - 43900799
Alignment:
Q  164 agagaaatgatatttgtacaaccactttatt 194  Q
    |||||||||||||||||||||||||||||||    
T  43900829 agagaaatgatatttgtacaaccactttatt 43900799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 193
Target Start/End: Complemental strand, 46316028 - 46315998
Alignment:
Q  163 tagagaaatgatatttgtacaaccactttat 193  Q
    |||||||||||||||||||||||||||||||    
T  46316028 tagagaaatgatatttgtacaaccactttat 46315998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 164 - 193
Target Start/End: Complemental strand, 43499633 - 43499604
Alignment:
Q  164 agagaaatgatatttgtacaaccactttat 193  Q
    ||||||||||||||||||||||||||||||    
T  43499633 agagaaatgatatttgtacaaccactttat 43499604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 191
Target Start/End: Complemental strand, 34271563 - 34271535
Alignment:
Q  163 tagagaaatgatatttgtacaaccacttt 191  Q
    |||||||||||||||||||||||||||||    
T  34271563 tagagaaatgatatttgtacaaccacttt 34271535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 191
Target Start/End: Complemental strand, 34607993 - 34607965
Alignment:
Q  163 tagagaaatgatatttgtacaaccacttt 191  Q
    |||||||||||||||||||||||||||||    
T  34607993 tagagaaatgatatttgtacaaccacttt 34607965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 191
Target Start/End: Complemental strand, 41877684 - 41877656
Alignment:
Q  163 tagagaaatgatatttgtacaaccacttt 191  Q
    |||||||||||||||||||||||||||||    
T  41877684 tagagaaatgatatttgtacaaccacttt 41877656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 191
Target Start/End: Complemental strand, 43409435 - 43409407
Alignment:
Q  163 tagagaaatgatatttgtacaaccacttt 191  Q
    |||||||||||||||||||||||||||||    
T  43409435 tagagaaatgatatttgtacaaccacttt 43409407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 191
Target Start/End: Complemental strand, 48490575 - 48490547
Alignment:
Q  163 tagagaaatgatatttgtacaaccacttt 191  Q
    |||||||||||||||||||||||||||||    
T  48490575 tagagaaatgatatttgtacaaccacttt 48490547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 194
Target Start/End: Original strand, 199265 - 199295
Alignment:
Q  164 agagaaatgatatttgtacaaccactttatt 194  Q
    |||||||||||||||||||||||||||||||    
T  199265 agagaaatgatatttgtacaaccactttatt 199295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 165 - 194
Target Start/End: Original strand, 16387 - 16416
Alignment:
Q  165 gagaaatgatatttgtacaaccactttatt 194  Q
    ||||||||||||||||||||||||||||||    
T  16387 gagaaatgatatttgtacaaccactttatt 16416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 164 - 193
Target Start/End: Original strand, 9452 - 9481
Alignment:
Q  164 agagaaatgatatttgtacaaccactttat 193  Q
    ||||||||||||||||||||||||||||||    
T  9452 agagaaatgatatttgtacaaccactttat 9481  T

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Target: scaffold0130 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 164 - 193
Target Start/End: Original strand, 25702 - 25731
Alignment:
Q  164 agagaaatgatatttgtacaaccactttat 193  Q
    ||||||||||||||||||||||||||||||    
T  25702 agagaaatgatatttgtacaaccactttat 25731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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