View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17692_low_4 (Length: 331)

Name: NF17692_low_4
Description: NF17692
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17692_low_4
NF17692_low_4
[»] chr1 (8 HSPs)
chr1 (7-257)||(24310382-24310635)
chr1 (113-257)||(24416053-24416197)
chr1 (137-326)||(24340710-24340899)
chr1 (137-326)||(24353075-24353264)
chr1 (142-257)||(24367472-24367584)
chr1 (128-257)||(24323056-24323189)
chr1 (7-107)||(24367340-24367440)
chr1 (194-269)||(24369797-24369872)
[»] chr4 (35 HSPs)
chr4 (208-326)||(37826563-37826681)
chr4 (147-257)||(48852993-48853100)
chr4 (198-269)||(48864395-48864466)
chr4 (192-270)||(49043797-49043875)
chr4 (197-254)||(48147358-48147415)
chr4 (199-270)||(7790441-7790512)
chr4 (198-257)||(49038520-49038579)
chr4 (192-270)||(45371703-45371781)
chr4 (204-257)||(7771761-7771814)
chr4 (192-257)||(7773467-7773532)
chr4 (192-257)||(7878737-7878802)
chr4 (197-270)||(45384521-45384594)
chr4 (197-270)||(48156058-48156131)
chr4 (204-256)||(7237386-7237438)
chr4 (143-247)||(48903260-48903364)
chr4 (205-273)||(50666682-50666750)
chr4 (143-256)||(48863573-48863683)
chr4 (7-270)||(49040781-49041034)
chr4 (199-257)||(7766003-7766061)
chr4 (199-257)||(7813838-7813896)
chr4 (199-257)||(7908663-7908721)
chr4 (192-270)||(45365849-45365927)
chr4 (192-257)||(49048197-49048262)
chr4 (199-257)||(7786825-7786883)
chr4 (199-257)||(7800998-7801056)
chr4 (133-326)||(50669377-50669570)
chr4 (204-248)||(50672864-50672908)
chr4 (207-257)||(48870929-48870979)
chr4 (207-257)||(48876233-48876283)
chr4 (207-257)||(48886615-48886665)
chr4 (209-250)||(48734174-48734215)
chr4 (7-88)||(49043994-49044075)
chr4 (212-252)||(48735058-48735098)
chr4 (199-247)||(48861649-48861697)
chr4 (7-107)||(48863425-48863525)
[»] chr5 (7 HSPs)
chr5 (7-326)||(42561906-42562213)
chr5 (192-257)||(9120117-9120182)
chr5 (7-88)||(29696408-29696489)
chr5 (192-242)||(179412-179462)
chr5 (197-253)||(29688488-29688544)
chr5 (143-182)||(29712161-29712200)
chr5 (204-256)||(29696602-29696654)
[»] chr7 (1 HSPs)
chr7 (192-257)||(48884178-48884243)
[»] chr3 (4 HSPs)
chr3 (199-256)||(11024146-11024203)
chr3 (199-256)||(11005571-11005628)
chr3 (192-270)||(47451529-47451607)
chr3 (197-256)||(11015134-11015193)
[»] chr6 (3 HSPs)
chr6 (192-254)||(21016175-21016237)
chr6 (205-245)||(14197337-14197377)
chr6 (204-249)||(21979278-21979323)
[»] chr8 (7 HSPs)
chr8 (197-248)||(4031577-4031628)
chr8 (197-254)||(4962161-4962221)
chr8 (197-326)||(12195683-12195812)
chr8 (197-326)||(12440111-12440240)
chr8 (199-273)||(15349244-15349318)
chr8 (199-256)||(12200703-12200760)
chr8 (199-256)||(12445131-12445188)


Alignment Details
Target: chr1 (Bit Score: 220; Significance: 1e-121; HSPs: 8)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 7 - 257
Target Start/End: Original strand, 24310382 - 24310635
Alignment:
Q  7 ctattcactggttggctattcgtcatgatgtatgcgagtatgttattgtttcctttcatttaattgaaaggatacttctagaaattcctctcccagatga 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24310382 ctattcactggttggctattcgtcatgatgtatgcgagtatgttattgtttcctttcatttaattgaaaggatacttctagaaattcctctcccagatga 24310481  T
Q  107 t---gatgatgatattgaatatggttcgacagattgtagtttatgggtatttagaggatttctcagtctatgggttatgagggacgaggataaagttgat 203  Q
    |   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24310482 tcatgatgatgatattgaatatggttcgacagattgtagtttatgggtatttagaggatttctcagtctatgggttatgagggacgaggataaagttgat 24310581  T
Q  204 atatgggtgatgaaagaatacaaactgcattcgtcttggactaagactcttgtt 257  Q
    |||||||||||||||||||||||| |||| || ||||||| ||| |||||||||    
T  24310582 atatgggtgatgaaagaatacaaagtgcagtcttcttggagtaaaactcttgtt 24310635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 113 - 257
Target Start/End: Original strand, 24416053 - 24416197
Alignment:
Q  113 tgatattgaatatggttcgacagattgtagtttatgggtatttagaggatttctcagtctatgggttatgagggacgaggataaagttgatatatgggtg 212  Q
    ||||||||||| | | || ||||||| |||||||||||||||||||||||||||||||||||||||| |||||    |||||| ||||||||||||||||    
T  24416053 tgatattgaattttggtctacagattatagtttatgggtatttagaggatttctcagtctatgggttttgaggtttaaggatagagttgatatatgggtg 24416152  T
Q  213 atgaaagaatacaaactgcattcgtcttggactaagactcttgtt 257  Q
    |||||||||||||||  ||| || ||||||||||| |||||||||    
T  24416153 atgaaagaatacaaagggcagtcatcttggactaaaactcttgtt 24416197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 137 - 326
Target Start/End: Original strand, 24340710 - 24340899
Alignment:
Q  137 ttgtagtttatgggtatttagaggatttctcagtctatgggttatgagggacgaggataaagttgatatatgggtgatgaaagaatacaaactgcattcg 236  Q
    |||| |||||||||||| |||||||||||| |||||||||||||||  ||| |||||||  |||||||| ||||| ||||||||||| ||| |||| ||     
T  24340710 ttgtggtttatgggtatgtagaggatttctaagtctatgggttatggtggatgaggatacggttgatatctgggtaatgaaagaatataaagtgcagtca 24340809  T
Q  237 tcttggactaagactcttgttgttcgtattgatgatgccattcccaatttttaccctctatgttctacaaaaagtggtgatattcttgga 326  Q
    ||||||||||| ||||||||| ||  || | ||||| ||||||  ||| ||| || | |||||| ||||| ||||||||||||| |||||    
T  24340810 tcttggactaaaactcttgttcttactacttatgataccattcataatgtttcccttgtatgttgtacaacaagtggtgatattgttgga 24340899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 137 - 326
Target Start/End: Original strand, 24353075 - 24353264
Alignment:
Q  137 ttgtagtttatgggtatttagaggatttctcagtctatgggttatgagggacgaggataaagttgatatatgggtgatgaaagaatacaaactgcattcg 236  Q
    |||| |||||||||||| |||||||||||| |||||||||||||||  ||| |||||||  |||||||| ||||| ||||||||||| ||| |||| ||     
T  24353075 ttgtggtttatgggtatgtagaggatttctaagtctatgggttatggtggatgaggatacggttgatatctgggtaatgaaagaatataaagtgcagtca 24353174  T
Q  237 tcttggactaagactcttgttgttcgtattgatgatgccattcccaatttttaccctctatgttctacaaaaagtggtgatattcttgga 326  Q
    ||||||||||| ||||||||| ||  || | ||||| ||||||  ||| ||| || | |||||| ||||| ||||||||||||| |||||    
T  24353175 tcttggactaaaactcttgttcttactacttatgataccattcataatgtttcccttgtatgttgtacaacaagtggtgatattgttgga 24353264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 142 - 257
Target Start/End: Original strand, 24367472 - 24367584
Alignment:
Q  142 gtttatgggtatttagaggatttctcagtctatgggttatgagggacgaggataaagttgatatatgggtgatgaaagaatacaaactgcattcgtcttg 241  Q
    |||||||||||||||||||||||||||||||||||||| |||||   || |||| | || |||||||||| ||| ||||||||||| |||||||||||||    
T  24367472 gtttatgggtatttagaggatttctcagtctatgggttttgagg--aga-gatacactttatatatgggtaatggaagaatacaaagtgcattcgtcttg 24367568  T
Q  242 gactaagactcttgtt 257  Q
    |||||| |||||||||    
T  24367569 gactaaaactcttgtt 24367584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 128 - 257
Target Start/End: Original strand, 24323056 - 24323189
Alignment:
Q  128 ttcgacagattgtagtttatgggtatttagaggatttctcagtctatgggttatgagggacgaggataaagttgatata----tgggtgatgaaagaata 223  Q
    ||||| ||||| | |||||||||||||||||||||||| ||||||||||||| ||  ||||  || |||||||||||||    |||||||||||||||||    
T  24323056 ttcgaaagattatggtttatgggtatttagaggatttcccagtctatgggttttggaggacttgggtaaagttgatatatgggtgggtgatgaaagaata 24323155  T
Q  224 caaactgcattcgtcttggactaagactcttgtt 257  Q
    |||| |||| || |||| |||||| |||||||||    
T  24323156 caaagtgcagtcatcttcgactaaaactcttgtt 24323189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 7 - 107
Target Start/End: Original strand, 24367340 - 24367440
Alignment:
Q  7 ctattcactggttggctattcgtcatgatgtatgcgagtatgttattgtttcctttcatttaattgaaaggatacttctagaaattcctctcccagatga 106  Q
    |||||||||||||| || ||||| ||||| || | |   ||||||||||| |||||| |||||| ||||||| |||||| || ||||||||||||| |||    
T  24367340 ctattcactggttgacttttcgttatgatatacgtgtcaatgttattgttgcctttcttttaatggaaaggaaacttctcgatattcctctcccagttga 24367439  T
Q  107 t 107  Q
    |    
T  24367440 t 24367440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 194 - 269
Target Start/End: Original strand, 24369797 - 24369872
Alignment:
Q  194 taaagttgatatatgggtgatgaaagaatacaaactgcattcgtcttggactaagactcttgttgttcgtattgat 269  Q
    |||||||||||||||||||||| || | ||   | ||||||| ||||||||||| ||||||||| || ||||||||    
T  24369797 taaagttgatatatgggtgatggaatagtatggagtgcattcatcttggactaaaactcttgttcttagtattgat 24369872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 111; Significance: 5e-56; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 208 - 326
Target Start/End: Complemental strand, 37826681 - 37826563
Alignment:
Q  208 gggtgatgaaagaatacaaactgcattcgtcttggactaagactcttgttgttcgtattgatgatgccattcccaatttttaccctctatgttctacaaa 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  37826681 gggtgatgaaagaatacaaactgcattcgtcttggactaagactcttgttgttcggattgatgatgccattcccaatttttaccctctatgttctacaaa 37826582  T
Q  308 aagtggtgatattcttgga 326  Q
    ||||||||||||| |||||    
T  37826581 aagtggtgatattattgga 37826563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 147 - 257
Target Start/End: Original strand, 48852993 - 48853100
Alignment:
Q  147 tgggtatttagaggatttctcagtctatgggttatgagggacgaggataaagttgatatatgggtgatgaaagaatacaaactgcattcgtcttggacta 246  Q
    ||||||||||||| |||||| ||| ||||||| ||| |||| ||   || |||||| |||||||| ||||||||||||||| ||| ||||||||||||||    
T  48852993 tgggtatttagagaatttctaagtatatgggtcatgggggatga---tacagttgaaatatgggtcatgaaagaatacaaagtgcgttcgtcttggacta 48853089  T
Q  247 agactcttgtt 257  Q
    |||||||||||    
T  48853090 agactcttgtt 48853100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 198 - 269
Target Start/End: Original strand, 48864395 - 48864466
Alignment:
Q  198 gttgatatatgggtgatgaaagaatacaaactgcattcgtcttggactaagactcttgttgttcgtattgat 269  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||||||||| ||||||| ||| |||||||    
T  48864395 gttgaaatatgggtgatgaaagaatacaaagtgcattcgtcttggactaagattcttgttcttcctattgat 48864466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 192 - 270
Target Start/End: Complemental strand, 49043875 - 49043797
Alignment:
Q  192 gataaagttgatatatgggtgatgaaagaatacaaactgcattcgtcttggactaagactcttgttgttcgtattgatg 270  Q
    |||| |||||| |||||||||||||||||||||||| |||||||||| |||||||||||||||||| ||  ||||||||    
T  49043875 gatatagttgaaatatgggtgatgaaagaatacaaagtgcattcgtcatggactaagactcttgttttttctattgatg 49043797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 197 - 254
Target Start/End: Complemental strand, 48147415 - 48147358
Alignment:
Q  197 agttgatatatgggtgatgaaagaatacaaactgcattcgtcttggactaagactctt 254  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  48147415 agttgaaatatgggtgatgaaagaatacaaagtgcattcgtcttggactaagactctt 48147358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 199 - 270
Target Start/End: Original strand, 7790441 - 7790512
Alignment:
Q  199 ttgatatatgggtgatgaaagaatacaaactgcattcgtcttggactaagactcttgttgttcgtattgatg 270  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||  ||||||||    
T  7790441 ttgaaatatgggtgatgaaagaatacaaagtgcattcgtcttggactaaaactcttgttctttctattgatg 7790512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 198 - 257
Target Start/End: Complemental strand, 49038579 - 49038520
Alignment:
Q  198 gttgatatatgggtgatgaaagaatacaaactgcattcgtcttggactaagactcttgtt 257  Q
    ||||| |||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  49038579 gttgaaatatgggtgatgaaagaatacaaagttcattcgtcttggactaagactcttgtt 49038520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 192 - 270
Target Start/End: Complemental strand, 45371781 - 45371703
Alignment:
Q  192 gataaagttgatatatgggtgatgaaagaatacaaactgcattcgtcttggactaagactcttgttgttcgtattgatg 270  Q
    |||| |||||| |||||||| ||||||||||||||| ||||||||||||||||||||||| ||||| ||| ||| ||||    
T  45371781 gatacagttgaaatatgggttatgaaagaatacaaagtgcattcgtcttggactaagacttttgttcttcctatcgatg 45371703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 204 - 257
Target Start/End: Original strand, 7771761 - 7771814
Alignment:
Q  204 atatgggtgatgaaagaatacaaactgcattcgtcttggactaagactcttgtt 257  Q
    |||||||||||||||||||||||| |||||||||| |||||||| |||||||||    
T  7771761 atatgggtgatgaaagaatacaaagtgcattcgtcatggactaaaactcttgtt 7771814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 192 - 257
Target Start/End: Complemental strand, 7773532 - 7773467
Alignment:
Q  192 gataaagttgatatatgggtgatgaaagaatacaaactgcattcgtcttggactaagactcttgtt 257  Q
    |||| |||||| |||||||||||||||||||||||| ||||||||||||||| |||  ||||||||    
T  7773532 gatacagttgaaatatgggtgatgaaagaatacaaagtgcattcgtcttggattaaatctcttgtt 7773467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 192 - 257
Target Start/End: Original strand, 7878737 - 7878802
Alignment:
Q  192 gataaagttgatatatgggtgatgaaagaatacaaactgcattcgtcttggactaagactcttgtt 257  Q
    |||| |||||| |||||||||||||||||||||||| ||||||| ||||||| ||| |||||||||    
T  7878737 gatacagttgaaatatgggtgatgaaagaatacaaagtgcattcatcttggattaaaactcttgtt 7878802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 197 - 270
Target Start/End: Complemental strand, 45384594 - 45384521
Alignment:
Q  197 agttgatatatgggtgatgaaagaatacaaactgcattcgtcttggactaagactcttgttgttcgtattgatg 270  Q
    |||||| |||||||||||||||||||| ||| |||||||||||||||| ||||||| |||| ||| | ||||||    
T  45384594 agttgaaatatgggtgatgaaagaatataaagtgcattcgtcttggacaaagactcgtgttcttccttttgatg 45384521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 197 - 270
Target Start/End: Complemental strand, 48156131 - 48156058
Alignment:
Q  197 agttgatatatgggtgatgaaagaatacaaactgcattcgtcttggactaagactcttgttgttcgtattgatg 270  Q
    |||||| |||||||||||||| ||||||||| ||||||| ||||||||||| ||||||||  ||| ||||||||    
T  48156131 agttgaaatatgggtgatgaacgaatacaaagtgcattcttcttggactaaaactcttgtccttcctattgatg 48156058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 204 - 256
Target Start/End: Complemental strand, 7237438 - 7237386
Alignment:
Q  204 atatgggtgatgaaagaatacaaactgcattcgtcttggactaagactcttgt 256  Q
    |||||||||||||||||||||||| ||||||||| ||||||||| ||||||||    
T  7237438 atatgggtgatgaaagaatacaaaatgcattcgttttggactaaaactcttgt 7237386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 143 - 247
Target Start/End: Original strand, 48903260 - 48903364
Alignment:
Q  143 tttatgggtatttagaggatttctcagtctatgggttatgagggacgaggataaagttgatatatgggtgatgaaagaatacaaactgcattcgtcttgg 242  Q
    ||||||||||||| ||| |||||| || ||||||| | ||    ||||  ||||| |||| |||||||||||||||||||||||| |||||| |||||||    
T  48903260 tttatgggtatttggagaatttcttagcctatgggctttggattacgataataaatttgaaatatgggtgatgaaagaatacaaagtgcatttgtcttgg 48903359  T
Q  243 actaa 247  Q
    |||||    
T  48903360 actaa 48903364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 205 - 273
Target Start/End: Original strand, 50666682 - 50666750
Alignment:
Q  205 tatgggtgatgaaagaatacaaactgcattcgtcttggactaagactcttgttgttcgtattgatgatg 273  Q
    ||||||||||| ||||||||||| ||||||| ||||||||||| ||||||||| |||  ||||||||||    
T  50666682 tatgggtgatgtaagaatacaaagtgcattcatcttggactaaaactcttgttattcacattgatgatg 50666750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 143 - 256
Target Start/End: Original strand, 48863573 - 48863683
Alignment:
Q  143 tttatgggtatttagaggatttctcagtctatgggttatgagggacgaggataaagttgatatatgggtgatgaaagaatacaaactgcattcgtcttgg 242  Q
    |||||||||||||||||||| ||||||||||||||||  | ||   ||  |||| ||||| |||||||||||| ||||||||  | ||||||| ||||||    
T  48863573 tttatgggtatttagaggatctctcagtctatgggtttcgggg---gatcataaggttgacatatgggtgatggaagaatacggagtgcattcatcttgg 48863669  T
Q  243 actaagactcttgt 256  Q
    | ||| ||||||||    
T  48863670 attaaaactcttgt 48863683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 270
Target Start/End: Complemental strand, 49041034 - 49040781
Alignment:
Q  7 ctattcactggttggctattcgtcatgatgtatgcgagtatgttattgtt-tcctttcatttaat-tgaaaggatacttctagaaattcctctcccagat 104  Q
    ||||||| ||||||||| ||||||||||| |||| |  |||||||||||| ||||||||||||||  ||||||  |||||||   || |||||||||       
T  49041034 ctattcattggttggcttttcgtcatgatatatgtgtttatgttattgttgtcctttcatttaataggaaagggaacttctattgatacctctccca--- 49040938  T
Q  105 gatgatgatgatattgaatatggttcgacagattgtagtttatgggtatttagaggatttctcagtctatgggttatgagggacgaggataaagttgata 204  Q
          |||||||||||| ||| ||| |  ||| ||  |||||||||||||| ||||||||||||||||||||||  | ||   ||  |||  |||||||    
T  49040937 ------gatgatattgaaaatgattctaatgatcgtgatttatgggtatttaaaggatttctcagtctatgggtttcgggg---gatcatacggttgata 49040847  T
Q  205 tatgggtgatgaaagaatacaaactgcattcgtcttggactaagactcttgttgttcgtattgatg 270  Q
    ||||||||||| |||||||   | ||||||| ||||||| ||| | ||||||  ||| ||||||||    
T  49040846 tatgggtgatggaagaatatggagtgcattcatcttggattaaaattcttgtgcttcctattgatg 49040781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 199 - 257
Target Start/End: Original strand, 7766003 - 7766061
Alignment:
Q  199 ttgatatatgggtgatgaaagaatacaaactgcattcgtcttggactaagactcttgtt 257  Q
    |||| |||||||||||||||||||||||| || ||||||| ||||||||||| ||||||    
T  7766003 ttgaaatatgggtgatgaaagaatacaaagtgtattcgtcatggactaagacacttgtt 7766061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 199 - 257
Target Start/End: Original strand, 7813838 - 7813896
Alignment:
Q  199 ttgatatatgggtgatgaaagaatacaaactgcattcgtcttggactaagactcttgtt 257  Q
    |||| ||||||||| |||||||||||||| ||||||||||||||| ||| |||||||||    
T  7813838 ttgaaatatgggtgttgaaagaatacaaagtgcattcgtcttggaataaaactcttgtt 7813896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 199 - 257
Target Start/End: Original strand, 7908663 - 7908721
Alignment:
Q  199 ttgatatatgggtgatgaaagaatacaaactgcattcgtcttggactaagactcttgtt 257  Q
    |||| |||||||||||||||||||||||| ||||||| ||||||| ||| |||||||||    
T  7908663 ttgaaatatgggtgatgaaagaatacaaagtgcattcatcttggaataaaactcttgtt 7908721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 192 - 270
Target Start/End: Complemental strand, 45365927 - 45365849
Alignment:
Q  192 gataaagttgatatatgggtgatgaaagaatacaaactgcattcgtcttggactaagactcttgttgttcgtattgatg 270  Q
    |||| |||||| |||||||||||||||||||| ||| ||| |||||||||||| |||||||  ||| ||| ||||||||    
T  45365927 gatacagttgaaatatgggtgatgaaagaatataaagtgcgttcgtcttggacaaagactcacgttcttcctattgatg 45365849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 257
Target Start/End: Complemental strand, 49048262 - 49048197
Alignment:
Q  192 gataaagttgatatatgggtgatgaaagaatacaaactgcattcgtcttggactaagactcttgtt 257  Q
    |||| |||||| ||||||||||||||||| || ||| |||||||||| |||||||||||| |||||    
T  49048262 gatatagttgaaatatgggtgatgaaagagtataaagtgcattcgtcatggactaagacttttgtt 49048197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 257
Target Start/End: Original strand, 7786825 - 7786883
Alignment:
Q  199 ttgatatatgggtgatgaaagaatacaaactgcattcgtcttggactaagactcttgtt 257  Q
    |||| |||||||||||||||||||||||  ||||||  ||||||| |||||||||||||    
T  7786825 ttgaaatatgggtgatgaaagaatacaacgtgcatttatcttggaataagactcttgtt 7786883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 257
Target Start/End: Original strand, 7800998 - 7801056
Alignment:
Q  199 ttgatatatgggtgatgaaagaatacaaactgcattcgtcttggactaagactcttgtt 257  Q
    |||| ||||||||| ||||||| |||||| ||||||||||||||| ||| |||||||||    
T  7800998 ttgaaatatgggtgttgaaagattacaaagtgcattcgtcttggaataaaactcttgtt 7801056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 133 - 326
Target Start/End: Original strand, 50669377 - 50669570
Alignment:
Q  133 cagattgtagtttatgggtatttagaggatttctcagtctatgggttatgagggacgaggataaagttgatatatgggtgatgaaagaatacaaactgca 232  Q
    |||||||| |||| ||||||||| ||| |||||||||||| |||  | ||  |||| |  | ||| || | || |||||||||||||| | |||  ||||    
T  50669377 cagattgtggtttgtgggtatttggagaatttctcagtctttggactttggaggaccataacaaatttcaaatgtgggtgatgaaagattccaagttgca 50669476  T
Q  233 ttcgtcttggactaagactcttgttgttcgtattgatgatgccattcccaatttttaccctctatgttctacaaaaagtggtgatattcttgga 326  Q
    ||| |||||||||||||||||| || | |  |||||||  | |||||| || |||| |||| |||| |||||||| | |||||| ||| |||||    
T  50669477 ttcatcttggactaagactcttattctacagattgatgcagtcattcctaaattttcccctatatgctctacaaagaatggtgacattattgga 50669570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 248
Target Start/End: Original strand, 50672864 - 50672908
Alignment:
Q  204 atatgggtgatgaaagaatacaaactgcattcgtcttggactaag 248  Q
    ||||||||||||||| |||||||| |||||||||| |||||||||    
T  50672864 atatgggtgatgaaacaatacaaattgcattcgtcgtggactaag 50672908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 257
Target Start/End: Original strand, 48870929 - 48870979
Alignment:
Q  207 tgggtgatgaaagaatacaaactgcattcgtcttggactaagactcttgtt 257  Q
    ||||||||||| ||||||||| || | ||||||||||| ||||||||||||    
T  48870929 tgggtgatgaatgaatacaaagtgaactcgtcttggacaaagactcttgtt 48870979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 257
Target Start/End: Original strand, 48876233 - 48876283
Alignment:
Q  207 tgggtgatgaaagaatacaaactgcattcgtcttggactaagactcttgtt 257  Q
    ||||||||||| ||||||||| || | ||||||||||| ||||||||||||    
T  48876233 tgggtgatgaatgaatacaaagtgaactcgtcttggacaaagactcttgtt 48876283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 257
Target Start/End: Original strand, 48886615 - 48886665
Alignment:
Q  207 tgggtgatgaaagaatacaaactgcattcgtcttggactaagactcttgtt 257  Q
    ||||||||||| ||||||||| || | ||||||||||| ||||||||||||    
T  48886615 tgggtgatgaatgaatacaaagtgaactcgtcttggacaaagactcttgtt 48886665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 250
Target Start/End: Original strand, 48734174 - 48734215
Alignment:
Q  209 ggtgatgaaagaatacaaactgcattcgtcttggactaagac 250  Q
    ||||||||||||||||||| ||||||||| |||||| |||||    
T  48734174 ggtgatgaaagaatacaaagtgcattcgtattggacaaagac 48734215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 49044075 - 49043994
Alignment:
Q  7 ctattcactggttggctattcgtcatgatgtatgcgagtatgttattgtttcctttcatttaattgaaaggatacttctaga 88  Q
    ||||||||||||||||| ||| || |||| |||    | ||||||||||| ||||| ||||||||||||||| |||| ||||    
T  49044075 ctattcactggttggcttttcatcttgatttatcaatgaatgttattgttgcctttgatttaattgaaaggaaacttttaga 49043994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 212 - 252
Target Start/End: Complemental strand, 48735098 - 48735058
Alignment:
Q  212 gatgaaagaatacaaactgcattcgtcttggactaagactc 252  Q
    |||||||||||||||| || |||||||||||||||| ||||    
T  48735098 gatgaaagaatacaaagtgaattcgtcttggactaaaactc 48735058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 199 - 247
Target Start/End: Original strand, 48861649 - 48861697
Alignment:
Q  199 ttgatatatgggtgatgaaagaatacaaactgcattcgtcttggactaa 247  Q
    |||| |||||||| || |||||||||||| |||||| ||||||||||||    
T  48861649 ttgaaatatgggtaataaaagaatacaaagtgcatttgtcttggactaa 48861697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 107
Target Start/End: Original strand, 48863425 - 48863525
Alignment:
Q  7 ctattcactggttggctattcgtcatgatgtatgcgagtatgttattgtttcctttcatttaattgaaaggatacttctagaaattcctctcccagatga 106  Q
    ||||||| ||||||||| ||||||||||| || | |  |||||||||||| |||||| |||||  ||||||  |||||||   || ||||||| ||||||    
T  48863425 ctattcattggttggcttttcgtcatgatataggtgtttatgttattgttgcctttcgtttaacggaaagggaacttctattgatacctctcctagatga 48863524  T
Q  107 t 107  Q
    |    
T  48863525 t 48863525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 105; Significance: 2e-52; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 7 - 326
Target Start/End: Complemental strand, 42562213 - 42561906
Alignment:
Q  7 ctattcactggttggctattcgtcatgatgtatgcgagtatgttattgtttcctttcatttaattgaaaggatacttctagaaattcctctcccagatga 106  Q
    ||||||||||||||||| ||||||||||| |||  ||  ||||||||||| ||||||||||||  ||||||| ||||||||| |||| ||| |||         
T  42562213 ctattcactggttggctcttcgtcatgatatatatgaccatgttattgttgcctttcatttaacggaaaggaaacttctagagattcttcttcca----- 42562119  T
Q  107 tgatgatgatattgaatatggttcgacagattgtagtttatgggtatttagaggatttctcagtctatgggttatgagggacgaggataaagttgatata 206  Q
      ||  ||||||| | |||  ||| | || |||| |||| |||||||||||||||||||||||||||||| || ||||||||||   ||| |||||||||    
T  42562118 --at--tgatattaattataattccaaaggttgtggtttttgggtatttagaggatttctcagtctatggattttgagggacga---taatgttgatata 42562026  T
Q  207 tgggtgatgaaagaatacaaactgcattcgtcttggactaagactcttgttgttcgtattgatgatgccattcccaatttttaccctctatgttctacaa 306  Q
    ||||||||||||||||||||| ||||||| ||||||||||||| ||||||| ||| |||| |||||| ||||||| | |||| |||| |||  | |||||    
T  42562025 tgggtgatgaaagaatacaaagtgcattcatcttggactaagattcttgttcttcctatttatgatgacattccctacttttgccctttatcctatacaa 42561926  T
Q  307 aaagtggtgatattcttgga 326  Q
    ||| |||||||||| |||||    
T  42561925 aaaatggtgatattattgga 42561906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 257
Target Start/End: Original strand, 9120117 - 9120182
Alignment:
Q  192 gataaagttgatatatgggtgatgaaagaatacaaactgcattcgtcttggactaagactcttgtt 257  Q
    |||| |||||| |||||||||||||||||||||||| ||||||| |||||||  || |||||||||    
T  9120117 gatacagttgaaatatgggtgatgaaagaatacaaagtgcattcctcttggaagaaaactcttgtt 9120182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 29696408 - 29696489
Alignment:
Q  7 ctattcactggttggctattcgtcatgatgtatgcgagtatgttattgtttcctttcatttaattgaaaggatacttctaga 88  Q
    ||||||||||||||||| ||||| ||||| |||    |  |||||||||| ||||||||||||||||||||| |||||||||    
T  29696408 ctattcactggttggcttttcgtaatgatatatcaatgcctgttattgttgcctttcatttaattgaaaggaaacttctaga 29696489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 192 - 242
Target Start/End: Original strand, 179412 - 179462
Alignment:
Q  192 gataaagttgatatatgggtgatgaaagaatacaaactgcattcgtcttgg 242  Q
    |||| |||||| |||||||||||||||||||||||| ||||||| ||||||    
T  179412 gatacagttgaaatatgggtgatgaaagaatacaaagtgcattcatcttgg 179462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 29688488 - 29688544
Alignment:
Q  197 agttgatatatgggtgatgaaagaatacaaactgcattcgtcttggactaagactct 253  Q
    |||||| ||||||||||||||| |||||||  |||| ||||||||||| ||||||||    
T  29688488 agttgaaatatgggtgatgaaaaaatacaatgtgcaatcgtcttggacaaagactct 29688544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 143 - 182
Target Start/End: Complemental strand, 29712200 - 29712161
Alignment:
Q  143 tttatgggtatttagaggatttctcagtctatgggttatg 182  Q
    |||||||||||||||||||| |||||||||||||| ||||    
T  29712200 tttatgggtatttagaggatgtctcagtctatgggatatg 29712161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 204 - 256
Target Start/End: Original strand, 29696602 - 29696654
Alignment:
Q  204 atatgggtgatgaaagaatacaaactgcattcgtcttggactaagactcttgt 256  Q
    |||||||||||| || |||||||  |||| || ||||||||||||||||||||    
T  29696602 atatgggtgatggaaaaatacaatgtgcaatcctcttggactaagactcttgt 29696654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 192 - 257
Target Start/End: Original strand, 48884178 - 48884243
Alignment:
Q  192 gataaagttgatatatgggtgatgaaagaatacaaactgcattcgtcttggactaagactcttgtt 257  Q
    ||||||||||| |||| ||||||||||||||||||| |||||  ||||||||||||||||||||||    
T  48884178 gataaagttgaaatataggtgatgaaagaatacaaagtgcatatgtcttggactaagactcttgtt 48884243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 3e-17; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 199 - 256
Target Start/End: Complemental strand, 11024203 - 11024146
Alignment:
Q  199 ttgatatatgggtgatgaaagaatacaaactgcattcgtcttggactaagactcttgt 256  Q
    |||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  11024203 ttgaaatatgggttatgaaagaatacaaagtgcattcgtcttggactaagactcttgt 11024146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 199 - 256
Target Start/End: Complemental strand, 11005628 - 11005571
Alignment:
Q  199 ttgatatatgggtgatgaaagaatacaaactgcattcgtcttggactaagactcttgt 256  Q
    |||| |||||||| ||||||||||||||| |||||||||||||||||||| |||||||    
T  11005628 ttgaaatatgggttatgaaagaatacaaagtgcattcgtcttggactaaggctcttgt 11005571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 192 - 270
Target Start/End: Complemental strand, 47451607 - 47451529
Alignment:
Q  192 gataaagttgatatatgggtgatgaaagaatacaaactgcattcgtcttggactaagactcttgttgttcgtattgatg 270  Q
    |||| |||||| |||||||||||||||||||||||| |  |||||||||||   |||||||||||| ||| ||||||||    
T  47451607 gatatagttgaaatatgggtgatgaaagaatacaaagttaattcgtcttgggaaaagactcttgttcttcctattgatg 47451529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 197 - 256
Target Start/End: Complemental strand, 11015193 - 11015134
Alignment:
Q  197 agttgatatatgggtgatgaaagaatacaaactgcattcgtcttggactaagactcttgt 256  Q
    |||||| |||||||| ||||||||||||||| ||||||||||||||  ||| ||||||||    
T  11015193 agttgaaatatgggttatgaaagaatacaaagtgcattcgtcttgggttaaaactcttgt 11015134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 192 - 254
Target Start/End: Original strand, 21016175 - 21016237
Alignment:
Q  192 gataaagttgatatatgggtgatgaaagaatacaaactgcattcgtcttggactaagactctt 254  Q
    |||| |||||| |||||||| ||||||||||||||| | ||||||||||||||||||||||||    
T  21016175 gatatagttgaaatatgggttatgaaagaatacaaagtacattcgtcttggactaagactctt 21016237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 245
Target Start/End: Complemental strand, 14197377 - 14197337
Alignment:
Q  205 tatgggtgatgaaagaatacaaactgcattcgtcttggact 245  Q
    ||||||||||||||||||||||| ||||||| |||||||||    
T  14197377 tatgggtgatgaaagaatacaaaatgcattcatcttggact 14197337  T

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Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 249
Target Start/End: Complemental strand, 21979323 - 21979278
Alignment:
Q  204 atatgggtgatgaaagaatacaaactgcattcgtcttggactaaga 249  Q
    |||||||||||||||||||||||| ||| ||| ||||||| |||||    
T  21979323 atatgggtgatgaaagaatacaaagtgcgttcctcttggaataaga 21979278  T

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Target: chr8 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 197 - 248
Target Start/End: Complemental strand, 4031628 - 4031577
Alignment:
Q  197 agttgatatatgggtgatgaaagaatacaaactgcattcgtcttggactaag 248  Q
    |||||| |||||||| ||||||||||||||| ||||||||||||||||||||    
T  4031628 agttgaaatatgggttatgaaagaatacaaaatgcattcgtcttggactaag 4031577  T

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Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 197 - 254
Target Start/End: Complemental strand, 4962221 - 4962161
Alignment:
Q  197 agttgatatatgggtgatgaaagaatacaaactgcatt---cgtcttggactaagactctt 254  Q
    |||||| |||||||||||||||||||||||||||||||   |||| |||||||||||||||    
T  4962221 agttgaaatatgggtgatgaaagaatacaaactgcattcgtcgtcgtggactaagactctt 4962161  T

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Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 197 - 326
Target Start/End: Original strand, 12195683 - 12195812
Alignment:
Q  197 agttgatatatgggtgatgaaagaatacaaactgcattcgtcttggactaagactcttgttgttcgtattgatgatgccattcccaatttttaccctcta 296  Q
    |||||| ||||||| |||||||||||||||||  || || ||||||||||||||||||||  ||| ||||||  ||| ||| ||    |||| |||  ||    
T  12195683 agttgaaatatgggagatgaaagaatacaaacaacaatcatcttggactaagactcttgtaattcctattgacaatgacataccttggttttcccccgta 12195782  T
Q  297 tgttctacaaaaagtggtgatattcttgga 326  Q
    |  ||||||||||||||||||||| |||||    
T  12195783 tactctacaaaaagtggtgatattattgga 12195812  T

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Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 197 - 326
Target Start/End: Original strand, 12440111 - 12440240
Alignment:
Q  197 agttgatatatgggtgatgaaagaatacaaactgcattcgtcttggactaagactcttgttgttcgtattgatgatgccattcccaatttttaccctcta 296  Q
    |||||| ||||||| |||||||||||||||||  || || ||||||||||||||||||||  ||| ||||||  ||| ||| ||    |||| |||  ||    
T  12440111 agttgaaatatgggagatgaaagaatacaaacaacaatcatcttggactaagactcttgtaattcctattgacaatgacataccttggttttcccccgta 12440210  T
Q  297 tgttctacaaaaagtggtgatattcttgga 326  Q
    |  ||||||||||||||||||||| |||||    
T  12440211 tactctacaaaaagtggtgatattattgga 12440240  T

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Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 273
Target Start/End: Original strand, 15349244 - 15349318
Alignment:
Q  199 ttgatatatgggtgatgaaagaatacaaactgcattcgtcttggactaagactcttgttgttcgtattgatgatg 273  Q
    |||| |||||||||||||||||||||||| || | || |||||||| |||| ||||||| ||  |||||||||||    
T  15349244 ttgaaatatgggtgatgaaagaatacaaagtgaactcttcttggacaaagattcttgttcttaatattgatgatg 15349318  T

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Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 199 - 256
Target Start/End: Original strand, 12200703 - 12200760
Alignment:
Q  199 ttgatatatgggtgatgaaagaatacaaactgcattcgtcttggactaagactcttgt 256  Q
    |||| ||||||| |||||||  ||||||||||| |||||||||||| |||||||||||    
T  12200703 ttgaaatatgggcgatgaaaatatacaaactgcgttcgtcttggaccaagactcttgt 12200760  T

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Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 199 - 256
Target Start/End: Original strand, 12445131 - 12445188
Alignment:
Q  199 ttgatatatgggtgatgaaagaatacaaactgcattcgtcttggactaagactcttgt 256  Q
    |||| ||||||| |||||||  ||||||||||| |||||||||||| |||||||||||    
T  12445131 ttgaaatatgggcgatgaaaatatacaaactgcgttcgtcttggaccaagactcttgt 12445188  T

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