View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17693_high_4 (Length: 254)
Name: NF17693_high_4
Description: NF17693
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17693_high_4 |
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Alignment Details
Target: chr5 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 21 - 236
Target Start/End: Original strand, 1646751 - 1646966
Alignment:
| Q |
21 |
acaatttaaaatcctcttgcatgctttagtttattcattattttcttcaaaagaatcagttgttttggtgttgaagtacttcctttctatccacaaggaa |
120 |
Q |
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| T |
1646751 |
acaatttaaaatcctcttgcatgctttagtttattcattattttcttcaaaagactcagttgttttggtgttgaattccttcctttctatccacaaggaa |
1646850 |
T |
|
| Q |
121 |
caatgtcagctatgcttgcaggtacctcctctgccactttcaccacaagaagtaaccactccatcaaaaacactcacatcagaccttccaagacactcac |
220 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1646851 |
caatgtcagctatgcttgcaggtacctcctctgccactttcaccacaaggagtaaccactccatcaaaaacactcacatcagaccttccaagacactcac |
1646950 |
T |
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| Q |
221 |
tcctccatgtcaggta |
236 |
Q |
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|||||||||||||||| |
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| T |
1646951 |
tcctccatgtcaggta |
1646966 |
T |
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