View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17695_high_7 (Length: 242)

Name: NF17695_high_7
Description: NF17695
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17695_high_7
NF17695_high_7
[»] scaffold0014 (1 HSPs)
scaffold0014 (13-125)||(91394-91506)
[»] chr1 (79 HSPs)
chr1 (123-226)||(40714441-40714544)
chr1 (123-226)||(49955673-49955776)
chr1 (125-226)||(20760831-20760932)
chr1 (123-226)||(31050947-31051050)
chr1 (126-226)||(17188954-17189054)
chr1 (126-226)||(17189177-17189277)
chr1 (126-226)||(30326496-30326596)
chr1 (126-226)||(49955347-49955447)
chr1 (124-226)||(40714769-40714871)
chr1 (124-226)||(45750168-45750270)
chr1 (125-226)||(8898516-8898617)
chr1 (125-226)||(45749841-45749942)
chr1 (120-226)||(28325130-28325235)
chr1 (125-226)||(8898843-8898944)
chr1 (124-226)||(12905985-12906087)
chr1 (124-226)||(37929416-37929518)
chr1 (128-226)||(44523464-44523562)
chr1 (125-226)||(31058383-31058484)
chr1 (129-226)||(35040940-35041037)
chr1 (123-226)||(32558433-32558536)
chr1 (126-226)||(6367562-6367662)
chr1 (147-226)||(26024444-26024523)
chr1 (124-226)||(7371288-7371390)
chr1 (124-226)||(35038453-35038555)
chr1 (124-226)||(36694576-36694678)
chr1 (124-226)||(36710677-36710779)
chr1 (124-226)||(41098731-41098833)
chr1 (125-210)||(28011681-28011766)
chr1 (125-226)||(28324804-28324904)
chr1 (125-192)||(7371529-7371596)
chr1 (123-226)||(23209655-23209758)
chr1 (124-226)||(19515817-19515919)
chr1 (124-210)||(24905165-24905251)
chr1 (125-187)||(25885358-25885420)
chr1 (125-226)||(7820953-7821054)
chr1 (125-226)||(17662178-17662279)
chr1 (145-226)||(25647903-25647984)
chr1 (135-226)||(4960549-4960640)
chr1 (135-226)||(13914395-13914486)
chr1 (124-226)||(44522145-44522247)
chr1 (126-226)||(30711327-30711427)
chr1 (126-226)||(34464449-34464549)
chr1 (118-226)||(34464777-34464885)
chr1 (126-226)||(40772507-40772607)
chr1 (135-226)||(40210698-40210789)
chr1 (135-226)||(42248482-42248573)
chr1 (140-226)||(24009869-24009955)
chr1 (126-204)||(33442594-33442672)
chr1 (126-204)||(52134387-52134465)
chr1 (145-226)||(14878990-14879071)
chr1 (125-226)||(37578520-37578621)
chr1 (126-210)||(31197065-31197149)
chr1 (179-226)||(1103514-1103561)
chr1 (123-226)||(1841456-1841559)
chr1 (123-170)||(25884698-25884745)
chr1 (123-226)||(35152340-35152443)
chr1 (135-226)||(46163039-46163130)
chr1 (124-226)||(5734008-5734109)
chr1 (124-226)||(47999420-47999522)
chr1 (122-204)||(52134064-52134146)
chr1 (145-226)||(32917279-32917360)
chr1 (128-204)||(33442913-33442989)
chr1 (135-226)||(17691228-17691319)
chr1 (123-226)||(19017957-19018060)
chr1 (135-201)||(35152683-35152749)
chr1 (123-200)||(30711681-30711758)
chr1 (123-200)||(35473628-35473705)
chr1 (123-226)||(183519-183623)
chr1 (135-199)||(9443581-9443645)
chr1 (120-204)||(31514312-31514396)
chr1 (135-226)||(17692513-17692604)
chr1 (133-204)||(31514636-31514707)
chr1 (135-209)||(10303932-10304006)
chr1 (135-205)||(32132313-32132383)
chr1 (135-201)||(42533033-42533099)
chr1 (145-226)||(34849030-34849111)
chr1 (145-226)||(34850393-34850474)
chr1 (124-200)||(36694280-36694356)
chr1 (124-200)||(36710381-36710457)
[»] scaffold0388 (2 HSPs)
scaffold0388 (123-226)||(12565-12668)
scaffold0388 (129-226)||(12249-12340)
[»] chr5 (58 HSPs)
chr5 (124-226)||(17544374-17544476)
chr5 (125-226)||(33871664-33871765)
chr5 (126-226)||(8875449-8875549)
chr5 (126-226)||(20152781-20152881)
chr5 (126-226)||(33871339-33871439)
chr5 (124-226)||(20153244-20153343)
chr5 (125-226)||(3656744-3656845)
chr5 (132-201)||(8875618-8875687)
chr5 (119-226)||(5993882-5993989)
chr5 (135-226)||(39453309-39453400)
chr5 (125-226)||(16157183-16157284)
chr5 (126-226)||(21287983-21288083)
chr5 (135-226)||(16082986-16083077)
chr5 (135-226)||(19892636-19892727)
chr5 (135-226)||(24141461-24141552)
chr5 (135-226)||(35512157-35512248)
chr5 (124-226)||(20814463-20814565)
chr5 (124-226)||(20840531-20840633)
chr5 (140-226)||(38475327-38475413)
chr5 (145-226)||(3529170-3529251)
chr5 (125-210)||(6758178-6758263)
chr5 (145-226)||(11761768-11761849)
chr5 (141-226)||(22298557-22298642)
chr5 (119-204)||(1505960-1506045)
chr5 (145-226)||(13962883-13962964)
chr5 (145-226)||(24547453-24547534)
chr5 (145-226)||(27587167-27587248)
chr5 (135-226)||(5024346-5024437)
chr5 (135-226)||(13362556-13362647)
chr5 (135-226)||(32242251-32242342)
chr5 (135-226)||(40150142-40150233)
chr5 (140-226)||(17202413-17202499)
chr5 (145-226)||(28771166-28771247)
chr5 (125-210)||(41930515-41930600)
chr5 (129-210)||(41930829-41930910)
chr5 (121-197)||(297009-297085)
chr5 (144-204)||(6757883-6757943)
chr5 (147-226)||(186440-186519)
chr5 (155-226)||(17544077-17544148)
chr5 (125-226)||(18670201-18670299)
chr5 (125-204)||(31482721-31482800)
chr5 (135-226)||(38442077-38442168)
chr5 (180-226)||(21287797-21287843)
chr5 (126-204)||(31482402-31482480)
chr5 (135-226)||(18247095-18247184)
chr5 (150-226)||(35920512-35920588)
chr5 (133-204)||(1506286-1506357)
chr5 (135-226)||(40148907-40148998)
chr5 (125-226)||(11047437-11047537)
chr5 (124-226)||(14194751-14194852)
chr5 (180-226)||(29646690-29646736)
chr5 (125-226)||(6150453-6150554)
chr5 (133-204)||(297333-297404)
chr5 (123-193)||(6150781-6150851)
chr5 (123-200)||(14194420-14194497)
chr5 (135-200)||(42067878-42067943)
chr5 (125-173)||(39453680-39453728)
chr5 (160-200)||(42063288-42063328)
[»] chr4 (103 HSPs)
chr4 (128-226)||(45463075-45463173)
chr4 (124-226)||(50504151-50504253)
chr4 (129-226)||(11523952-11524049)
chr4 (117-226)||(27069236-27069345)
chr4 (125-226)||(54858886-54858987)
chr4 (125-226)||(3032581-3032682)
chr4 (125-226)||(54858559-54858660)
chr4 (126-226)||(10407889-10407989)
chr4 (126-226)||(10408215-10408315)
chr4 (122-226)||(51859732-51859836)
chr4 (123-226)||(27068907-27069010)
chr4 (117-226)||(27149322-27149430)
chr4 (124-226)||(39701235-39701337)
chr4 (129-226)||(5818101-5818198)
chr4 (123-226)||(52573225-52573328)
chr4 (124-226)||(16605600-16605702)
chr4 (137-226)||(22718265-22718354)
chr4 (137-226)||(22986862-22986951)
chr4 (129-226)||(45463399-45463496)
chr4 (125-226)||(52573554-52573655)
chr4 (124-226)||(27891582-27891684)
chr4 (125-226)||(50503824-50503925)
chr4 (137-226)||(22923149-22923238)
chr4 (137-226)||(22927802-22927891)
chr4 (137-226)||(22984081-22984170)
chr4 (125-226)||(22987177-22987278)
chr4 (137-226)||(22997669-22997758)
chr4 (129-226)||(39667102-39667199)
chr4 (125-226)||(14801735-14801836)
chr4 (129-226)||(22717942-22718039)
chr4 (118-226)||(7451826-7451934)
chr4 (146-226)||(37248256-37248336)
chr4 (123-226)||(13058034-13058137)
chr4 (123-226)||(50751826-50751928)
chr4 (125-226)||(11448057-11448158)
chr4 (145-226)||(24711130-24711211)
chr4 (145-226)||(49879504-49879585)
chr4 (129-226)||(50750890-50750987)
chr4 (126-210)||(9400519-9400603)
chr4 (123-210)||(42738028-42738115)
chr4 (123-226)||(50418965-50419068)
chr4 (124-223)||(51692551-51692650)
chr4 (124-226)||(44967366-44967468)
chr4 (140-226)||(53701826-53701912)
chr4 (145-226)||(18831368-18831449)
chr4 (125-202)||(22567107-22567184)
chr4 (125-210)||(27934531-27934616)
chr4 (123-204)||(34837393-34837474)
chr4 (122-210)||(6236827-6236914)
chr4 (135-226)||(32063664-32063755)
chr4 (123-226)||(35508568-35508671)
chr4 (135-226)||(52909262-52909353)
chr4 (135-226)||(54087023-54087114)
chr4 (128-210)||(9400832-9400914)
chr4 (152-226)||(16005864-16005938)
chr4 (120-226)||(23613303-23613409)
chr4 (124-226)||(34765708-34765810)
chr4 (117-226)||(36009141-36009251)
chr4 (124-226)||(39700907-39701009)
chr4 (145-226)||(5368966-5369047)
chr4 (126-210)||(4983039-4983123)
chr4 (124-204)||(51203607-51203687)
chr4 (135-226)||(24411367-24411458)
chr4 (135-206)||(29321253-29321324)
chr4 (125-204)||(34837073-34837152)
chr4 (128-199)||(39666772-39666843)
chr4 (125-204)||(42738350-42738429)
chr4 (126-204)||(38012489-38012567)
chr4 (152-226)||(43155824-43155898)
chr4 (124-226)||(55867442-55867544)
chr4 (123-204)||(32950461-32950542)
chr4 (145-210)||(33247293-33247358)
chr4 (126-210)||(4982726-4982810)
chr4 (133-209)||(6237165-6237241)
chr4 (134-202)||(27934839-27934907)
chr4 (135-206)||(30641529-30641598)
chr4 (133-204)||(9144773-9144844)
chr4 (125-204)||(9145085-9145164)
chr4 (179-226)||(9731538-9731585)
chr4 (135-210)||(11446279-11446354)
chr4 (135-226)||(15508001-15508091)
chr4 (135-226)||(30642474-30642565)
chr4 (125-204)||(32950141-32950220)
chr4 (123-226)||(37976481-37976584)
chr4 (123-226)||(39539246-39539349)
chr4 (126-204)||(38012170-38012248)
chr4 (135-209)||(40317008-40317082)
chr4 (135-209)||(40327082-40327156)
chr4 (129-210)||(33247586-33247667)
chr4 (125-226)||(35028326-35028427)
chr4 (135-200)||(41582456-41582521)
chr4 (135-200)||(41583585-41583650)
chr4 (124-200)||(50418666-50418742)
chr4 (122-154)||(51859441-51859473)
chr4 (135-226)||(10203630-10203721)
chr4 (135-226)||(17356250-17356341)
chr4 (135-200)||(40387476-40387541)
chr4 (125-218)||(53129842-53129935)
chr4 (123-200)||(54435451-54435528)
chr4 (150-210)||(8438305-8438364)
chr4 (124-200)||(51692873-51692949)
chr4 (190-226)||(51859471-51859507)
chr4 (135-195)||(54086704-54086764)
[»] chr2 (52 HSPs)
chr2 (126-226)||(28226070-28226170)
chr2 (125-226)||(15604338-15604439)
chr2 (125-226)||(8710794-8710895)
chr2 (124-226)||(8342185-8342287)
chr2 (129-226)||(8342505-8342602)
chr2 (129-226)||(15604665-15604762)
chr2 (118-226)||(6573535-6573643)
chr2 (127-226)||(11830365-11830464)
chr2 (125-226)||(41587234-41587334)
chr2 (127-226)||(41588384-41588483)
chr2 (117-226)||(6573038-6573146)
chr2 (123-226)||(44714089-44714191)
chr2 (135-226)||(15848097-15848188)
chr2 (120-226)||(36382155-36382261)
chr2 (125-213)||(14900791-14900879)
chr2 (126-226)||(22051321-22051421)
chr2 (126-226)||(25892394-25892494)
chr2 (147-226)||(16099076-16099155)
chr2 (124-226)||(11163351-11163453)
chr2 (140-226)||(39423529-39423615)
chr2 (145-226)||(39498329-39498410)
chr2 (135-226)||(2318168-2318258)
chr2 (135-226)||(6589687-6589778)
chr2 (135-226)||(10712732-10712823)
chr2 (121-204)||(13995668-13995751)
chr2 (135-226)||(28228679-28228770)
chr2 (124-202)||(14900494-14900572)
chr2 (125-226)||(34447812-34447913)
chr2 (145-226)||(45556131-45556212)
chr2 (124-204)||(13995992-13996072)
chr2 (118-226)||(28230067-28230175)
chr2 (135-226)||(202684-202775)
chr2 (125-204)||(1695739-1695818)
chr2 (125-204)||(33062049-33062128)
chr2 (125-204)||(33062369-33062448)
chr2 (125-204)||(33739702-33739781)
chr2 (121-204)||(33740022-33740105)
chr2 (135-226)||(39936575-39936665)
chr2 (140-226)||(3556337-3556423)
chr2 (124-226)||(6657876-6657978)
chr2 (125-226)||(3555249-3555350)
chr2 (124-204)||(41248557-41248637)
chr2 (124-204)||(41248878-41248958)
chr2 (135-226)||(37895675-37895766)
chr2 (148-226)||(36479740-36479818)
chr2 (135-200)||(199030-199095)
chr2 (133-204)||(1696059-1696130)
chr2 (135-226)||(43742004-43742095)
chr2 (137-226)||(3653408-3653496)
chr2 (157-226)||(6577605-6577674)
chr2 (182-226)||(25893546-25893590)
chr2 (126-222)||(30729621-30729717)
[»] chr7 (74 HSPs)
chr7 (123-226)||(43266263-43266366)
chr7 (118-226)||(42618237-42618345)
chr7 (123-226)||(33828300-33828403)
chr7 (125-226)||(23058755-23058856)
chr7 (117-226)||(43266592-43266701)
chr7 (126-226)||(22081885-22081985)
chr7 (126-226)||(32068422-32068522)
chr7 (126-226)||(42617911-42618011)
chr7 (129-226)||(25628481-25628578)
chr7 (129-226)||(32068099-32068196)
chr7 (125-226)||(32934674-32934775)
chr7 (126-226)||(25453128-25453228)
chr7 (128-226)||(25628804-25628902)
chr7 (125-226)||(27138267-27138368)
chr7 (129-226)||(28890582-28890679)
chr7 (129-226)||(32934351-32934448)
chr7 (129-225)||(10600276-10600372)
chr7 (126-226)||(22081560-22081659)
chr7 (124-226)||(25453454-25453556)
chr7 (124-226)||(28469336-28469438)
chr7 (124-226)||(39274868-39274970)
chr7 (129-226)||(46204424-46204521)
chr7 (126-202)||(10600026-10600102)
chr7 (126-226)||(23058429-23058529)
chr7 (140-226)||(10935808-10935894)
chr7 (121-226)||(13050108-13050214)
chr7 (145-226)||(6571032-6571113)
chr7 (145-225)||(32299034-32299114)
chr7 (145-226)||(6253490-6253571)
chr7 (145-226)||(17102039-17102120)
chr7 (145-226)||(19204508-19204589)
chr7 (145-226)||(22871605-22871686)
chr7 (122-223)||(24388815-24388916)
chr7 (138-226)||(18855982-18856070)
chr7 (122-210)||(32680591-32680679)
chr7 (135-226)||(40379778-40379869)
chr7 (119-226)||(46205635-46205742)
chr7 (124-210)||(32680908-32680994)
chr7 (145-226)||(16803973-16804054)
chr7 (145-226)||(27991758-27991839)
chr7 (145-226)||(42731438-42731519)
chr7 (135-226)||(2640506-2640597)
chr7 (135-226)||(13044681-13044772)
chr7 (123-226)||(27396923-27397026)
chr7 (123-226)||(45010932-45011035)
chr7 (124-204)||(34928969-34929049)
chr7 (135-219)||(37656861-37656945)
chr7 (124-204)||(39686853-39686933)
chr7 (126-226)||(42362450-42362550)
chr7 (123-226)||(5457235-5457338)
chr7 (135-226)||(23181322-23181413)
chr7 (125-204)||(30948479-30948558)
chr7 (135-210)||(32687406-32687481)
chr7 (125-204)||(34928649-34928728)
chr7 (179-226)||(48789131-48789178)
chr7 (135-200)||(18087692-18087757)
chr7 (120-226)||(29144310-29144416)
chr7 (135-207)||(10092215-10092287)
chr7 (135-207)||(22828165-22828237)
chr7 (123-163)||(41899234-41899274)
chr7 (135-210)||(18086298-18086373)
chr7 (133-204)||(30948167-30948238)
chr7 (135-210)||(32688562-32688637)
chr7 (125-204)||(39686533-39686612)
chr7 (135-226)||(42019925-42020016)
chr7 (124-210)||(17886834-17886920)
chr7 (160-226)||(43124480-43124546)
chr7 (180-226)||(45010652-45010698)
chr7 (123-208)||(20426676-20426761)
chr7 (135-208)||(23608817-23608890)
chr7 (125-158)||(33828188-33828221)
chr7 (117-173)||(28105492-28105548)
chr7 (182-226)||(32053471-32053515)
chr7 (126-226)||(33808323-33808423)
[»] scaffold0328 (2 HSPs)
scaffold0328 (124-226)||(11466-11568)
scaffold0328 (124-226)||(11138-11240)
[»] chr8 (73 HSPs)
chr8 (124-226)||(234066-234168)
chr8 (124-226)||(710477-710579)
chr8 (124-226)||(747689-747791)
chr8 (124-226)||(871584-871686)
chr8 (124-226)||(7983426-7983528)
chr8 (128-226)||(44664834-44664932)
chr8 (126-226)||(15229931-15230031)
chr8 (126-226)||(44664508-44664608)
chr8 (123-226)||(6471687-6471790)
chr8 (124-226)||(10445661-10445763)
chr8 (124-226)||(35634425-35634527)
chr8 (126-226)||(25124889-25124989)
chr8 (129-226)||(37542227-37542324)
chr8 (125-226)||(15230257-15230358)
chr8 (129-226)||(25124566-25124663)
chr8 (128-226)||(8998015-8998113)
chr8 (129-210)||(38003748-38003829)
chr8 (129-226)||(41353577-41353674)
chr8 (129-226)||(42945440-42945537)
chr8 (129-216)||(8997859-8997946)
chr8 (128-226)||(21432695-21432793)
chr8 (125-226)||(41353899-41354000)
chr8 (124-226)||(23663842-23663944)
chr8 (129-210)||(36325547-36325628)
chr8 (123-210)||(11674692-11674779)
chr8 (124-210)||(11675007-11675093)
chr8 (125-226)||(4994985-4995085)
chr8 (125-226)||(40318292-40318393)
chr8 (126-226)||(39071676-39071776)
chr8 (115-210)||(23505041-23505136)
chr8 (123-210)||(23507769-23507856)
chr8 (123-226)||(23698572-23698675)
chr8 (145-226)||(8316916-8316997)
chr8 (145-226)||(12273181-12273262)
chr8 (129-226)||(37542551-37542648)
chr8 (126-226)||(16388854-16388954)
chr8 (135-226)||(2535878-2535969)
chr8 (126-172)||(6472395-6472441)
chr8 (125-210)||(36325233-36325318)
chr8 (125-204)||(2266491-2266570)
chr8 (135-210)||(10749852-10749927)
chr8 (125-226)||(13186059-13186160)
chr8 (145-226)||(36928495-36928576)
chr8 (123-204)||(38845618-38845699)
chr8 (158-226)||(38003487-38003555)
chr8 (125-204)||(2266811-2266890)
chr8 (129-224)||(27500092-27500187)
chr8 (159-226)||(39474579-39474646)
chr8 (125-204)||(40775649-40775728)
chr8 (145-226)||(22915686-22915767)
chr8 (123-204)||(44406854-44406935)
chr8 (126-210)||(8746324-8746408)
chr8 (126-226)||(42803546-42803646)
chr8 (138-196)||(27500434-27500492)
chr8 (140-226)||(31608841-31608927)
chr8 (126-204)||(44407176-44407254)
chr8 (145-226)||(1425350-1425430)
chr8 (123-204)||(3041775-3041856)
chr8 (149-226)||(35756606-35756682)
chr8 (145-226)||(38955722-38955803)
chr8 (126-226)||(4405988-4406088)
chr8 (170-226)||(42945158-42945214)
chr8 (119-226)||(34060482-34060589)
chr8 (133-204)||(38845306-38845377)
chr8 (164-226)||(6472016-6472078)
chr8 (180-226)||(21433019-21433065)
chr8 (126-196)||(40775977-40776047)
chr8 (126-223)||(30459371-30459468)
chr8 (145-226)||(34061656-34061737)
chr8 (123-204)||(35449928-35450009)
chr8 (123-226)||(36186395-36186495)
chr8 (135-200)||(38862917-38862982)
chr8 (135-200)||(40317973-40318038)
[»] chr6 (50 HSPs)
chr6 (124-226)||(7160802-7160904)
chr6 (127-226)||(7905244-7905343)
chr6 (117-226)||(22503100-22503209)
chr6 (126-226)||(6517503-6517602)
chr6 (123-222)||(10781144-10781243)
chr6 (123-226)||(22502771-22502874)
chr6 (129-226)||(21836035-21836131)
chr6 (129-226)||(31407204-31407301)
chr6 (123-226)||(21836356-21836459)
chr6 (126-226)||(31406878-31406978)
chr6 (123-226)||(7161130-7161233)
chr6 (124-226)||(15913546-15913648)
chr6 (124-226)||(32593488-32593590)
chr6 (129-226)||(7905569-7905666)
chr6 (123-226)||(15913874-15913977)
chr6 (121-226)||(12065215-12065320)
chr6 (135-226)||(30803870-30803961)
chr6 (140-226)||(12080650-12080736)
chr6 (120-210)||(14196928-14197018)
chr6 (124-226)||(30337447-30337549)
chr6 (125-226)||(21628041-21628142)
chr6 (125-204)||(14196614-14196693)
chr6 (123-210)||(25485950-25486037)
chr6 (135-226)||(33517543-33517634)
chr6 (126-226)||(30725760-30725859)
chr6 (125-204)||(362869-362948)
chr6 (149-226)||(8089466-8089543)
chr6 (125-210)||(28000698-28000783)
chr6 (138-226)||(24210543-24210631)
chr6 (121-204)||(363149-363232)
chr6 (14-121)||(6639997-6640104)
chr6 (123-226)||(26463176-26463279)
chr6 (135-210)||(141084-141159)
chr6 (135-210)||(149105-149180)
chr6 (135-226)||(3059266-3059357)
chr6 (125-204)||(22373007-22373086)
chr6 (117-200)||(33647305-33647388)
chr6 (160-226)||(10781484-10781550)
chr6 (145-226)||(17734491-17734572)
chr6 (125-210)||(25486239-25486324)
chr6 (135-200)||(28498379-28498444)
chr6 (117-208)||(26464545-26464636)
chr6 (145-200)||(30337772-30337827)
chr6 (123-173)||(28000382-28000432)
chr6 (140-226)||(33646977-33647063)
chr6 (123-200)||(12080990-12081067)
chr6 (119-200)||(30726113-30726194)
chr6 (124-200)||(681082-681158)
chr6 (154-226)||(11392866-11392938)
chr6 (126-226)||(15115339-15115439)
[»] chr3 (73 HSPs)
chr3 (125-226)||(37778599-37778700)
chr3 (123-226)||(3469526-3469629)
chr3 (125-226)||(29118864-29118965)
chr3 (129-226)||(32306750-32306847)
chr3 (125-222)||(40788750-40788847)
chr3 (125-226)||(52032465-52032566)
chr3 (126-226)||(10294567-10294667)
chr3 (123-226)||(11910696-11910799)
chr3 (123-226)||(13948777-13948880)
chr3 (124-226)||(33156322-33156424)
chr3 (120-226)||(52032132-52032238)
chr3 (125-226)||(3469199-3469300)
chr3 (125-226)||(47551492-47551593)
chr3 (128-226)||(29685943-29686041)
chr3 (128-226)||(29686266-29686364)
chr3 (125-226)||(32306423-32306524)
chr3 (125-226)||(33506276-33506377)
chr3 (123-226)||(41421969-41422072)
chr3 (140-226)||(35643865-35643951)
chr3 (125-226)||(10294885-10294986)
chr3 (128-216)||(29118529-29118617)
chr3 (129-226)||(3596112-3596209)
chr3 (124-226)||(2796177-2796279)
chr3 (121-210)||(48322690-48322779)
chr3 (123-226)||(23458307-23458410)
chr3 (123-210)||(36314295-36314382)
chr3 (145-226)||(19741220-19741301)
chr3 (129-226)||(43998148-43998245)
chr3 (126-226)||(9294286-9294386)
chr3 (162-226)||(10307701-10307765)
chr3 (126-226)||(33154877-33154977)
chr3 (126-210)||(36314611-36314695)
chr3 (123-226)||(4322589-4322691)
chr3 (123-210)||(10770487-10770574)
chr3 (124-210)||(10770804-10770890)
chr3 (124-226)||(40033784-40033886)
chr3 (124-226)||(40788418-40788520)
chr3 (129-226)||(4323530-4323627)
chr3 (117-174)||(13949073-13949130)
chr3 (128-200)||(33506180-33506252)
chr3 (126-226)||(42855633-42855733)
chr3 (135-210)||(6956257-6956332)
chr3 (135-226)||(46474824-46474915)
chr3 (124-210)||(48322375-48322461)
chr3 (135-210)||(1079565-1079640)
chr3 (135-226)||(9368629-9368720)
chr3 (123-226)||(33689707-33689810)
chr3 (124-226)||(42342789-42342891)
chr3 (123-204)||(8041613-8041694)
chr3 (135-200)||(43607789-43607854)
chr3 (123-204)||(54466420-54466501)
chr3 (135-226)||(1078546-1078636)
chr3 (139-194)||(3596432-3596486)
chr3 (135-210)||(21186039-21186114)
chr3 (125-200)||(25107212-25107287)
chr3 (135-226)||(47856396-47856487)
chr3 (164-226)||(43384321-43384383)
chr3 (140-226)||(43608810-43608896)
chr3 (145-226)||(51994214-51994295)
chr3 (135-207)||(23276330-23276402)
chr3 (135-226)||(40506115-40506207)
chr3 (135-226)||(47857573-47857664)
chr3 (135-226)||(53756753-53756844)
chr3 (133-204)||(54466742-54466813)
chr3 (117-226)||(40758138-40758244)
chr3 (126-204)||(47921466-47921544)
chr3 (123-200)||(40758464-40758541)
chr3 (124-204)||(8041935-8042015)
chr3 (135-210)||(32431536-32431611)
chr3 (180-226)||(55052576-55052622)
chr3 (135-200)||(25108449-25108514)
chr3 (198-226)||(26463926-26463954)
chr3 (145-197)||(34142575-34142627)
[»] scaffold0771 (2 HSPs)
scaffold0771 (123-226)||(917-1020)
scaffold0771 (117-174)||(1213-1270)
[»] scaffold0599 (1 HSPs)
scaffold0599 (123-226)||(2390-2493)
[»] scaffold0006 (2 HSPs)
scaffold0006 (123-226)||(222115-222218)
scaffold0006 (129-226)||(221794-221890)
[»] scaffold0042 (1 HSPs)
scaffold0042 (128-226)||(12106-12204)
[»] scaffold0005 (1 HSPs)
scaffold0005 (125-226)||(37891-37992)
[»] scaffold0031 (1 HSPs)
scaffold0031 (126-226)||(68965-69065)
[»] scaffold0205 (2 HSPs)
scaffold0205 (125-210)||(21008-21093)
scaffold0205 (126-204)||(21288-21366)
[»] scaffold0007 (1 HSPs)
scaffold0007 (124-226)||(1767-1869)
[»] scaffold0020 (1 HSPs)
scaffold0020 (145-226)||(139691-139772)
[»] scaffold0008 (1 HSPs)
scaffold0008 (135-226)||(239879-239970)
[»] scaffold0024 (2 HSPs)
scaffold0024 (124-204)||(141913-141993)
scaffold0024 (124-204)||(141592-141672)
[»] scaffold0075 (1 HSPs)
scaffold0075 (140-207)||(14737-14804)
[»] scaffold0775 (1 HSPs)
scaffold0775 (135-226)||(6306-6397)
[»] scaffold0128 (1 HSPs)
scaffold0128 (135-226)||(19866-19957)
[»] scaffold0559 (1 HSPs)
scaffold0559 (126-196)||(1233-1303)


Alignment Details
Target: scaffold0014 (Bit Score: 101; Significance: 3e-50; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 13 - 125
Target Start/End: Original strand, 91394 - 91506
Alignment:
Q  13 aatatcacgcccagtgtttgaaataaaattttgaaaactcagacagacttgaaggattgagttgatataacaggcagtttgaattttttctcattttctc 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||    
T  91394 aatatcacgcccagtgtttgaaataaaattttgaaaactcagacagacttgaaggatttagttgatataacagtcagtttgaattttttctcgttttctc 91493  T
Q  113 atactaaaaatta 125  Q
    |||||||||||||    
T  91494 atactaaaaatta 91506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 92; Significance: 8e-45; HSPs: 79)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 123 - 226
Target Start/End: Original strand, 40714441 - 40714544
Alignment:
Q  123 ttaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatc 222  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||    
T  40714441 ttaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgttaatcctggcaatttacccttgcattgtttaatc 40714540  T
Q  223 attt 226  Q
    ||||    
T  40714541 attt 40714544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 123 - 226
Target Start/End: Complemental strand, 49955776 - 49955673
Alignment:
Q  123 ttaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatc 222  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| |||||||||||    
T  49955776 ttaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctttgtaatcgttaatcctggcaatttacccttgcattgtttaatc 49955677  T
Q  223 attt 226  Q
    ||||    
T  49955676 attt 49955673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 125 - 226
Target Start/End: Complemental strand, 20760932 - 20760831
Alignment:
Q  125 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcat 224  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||| |||||||||||||    
T  20760932 aggcttaatgatgtgtttcgtccttacaattaggcgtcatttaaaaattagtctctgtaatcgctaatcctggcaatttacccttgcattgtttaatcat 20760833  T
Q  225 tt 226  Q
    ||    
T  20760832 tt 20760831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 123 - 226
Target Start/End: Original strand, 31050947 - 31051050
Alignment:
Q  123 ttaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatc 222  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||| ||| |||||||||||    
T  31050947 ttaggcttaatgatgtgtttcgtccttgcaattaggcgttatttaaaaattagtctctgtaatcgctaatcctggcaatttacctttgcattgtttaatc 31051046  T
Q  223 attt 226  Q
    ||||    
T  31051047 attt 31051050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 126 - 226
Target Start/End: Original strand, 17188954 - 17189054
Alignment:
Q  126 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcatt 225  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| |||||||||||||||||||||| ||| ||||||||||    
T  17188954 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattatttaatcatt 17189053  T
Q  226 t 226  Q
    |    
T  17189054 t 17189054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 126 - 226
Target Start/End: Complemental strand, 17189277 - 17189177
Alignment:
Q  126 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcatt 225  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| || ||||||||| |||||||||||||||||||||| ||||||||||||||    
T  17189277 ggcttaatgatgtgtttcgtccttgcaattagacgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatt 17189178  T
Q  226 t 226  Q
    |    
T  17189177 t 17189177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 126 - 226
Target Start/End: Original strand, 30326496 - 30326596
Alignment:
Q  126 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcatt 225  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| |||| |||||||||||| ||||||||||||||    
T  30326496 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctctgtaatcgctaattctggtaatttacccttgcattgtttaatcatt 30326595  T
Q  226 t 226  Q
    |    
T  30326596 t 30326596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 126 - 226
Target Start/End: Original strand, 49955347 - 49955447
Alignment:
Q  126 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcatt 225  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| || ||||||||| |||||||||||||||||||||| ||||||||||||||    
T  49955347 ggcttaatgatgtgtttcgtccttgcaattaggcatcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatt 49955446  T
Q  226 t 226  Q
    |    
T  49955447 t 49955447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 124 - 226
Target Start/End: Complemental strand, 40714871 - 40714769
Alignment:
Q  124 taggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatca 223  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||| |||||||||||||||||| ||| ||||||||||||    
T  40714871 taggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccatgtaatcgctaatcctggcaatttacctttgcattgtttaatca 40714772  T
Q  224 ttt 226  Q
    |||    
T  40714771 ttt 40714769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 124 - 226
Target Start/End: Complemental strand, 45750270 - 45750168
Alignment:
Q  124 taggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatca 223  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||| ||||||||| |||| ||||||||||||    
T  45750270 taggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctttgtaatcgctaatcctagcaatttactcttgcattgtttaatca 45750171  T
Q  224 ttt 226  Q
    |||    
T  45750170 ttt 45750168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 125 - 226
Target Start/End: Original strand, 8898516 - 8898617
Alignment:
Q  125 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcat 224  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| |||| |||| ||||||| ||||||||||||||||||    
T  8898516 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtcactgtaatcgctaattctggtaatttactcttgtattgtttaatcat 8898615  T
Q  225 tt 226  Q
    ||    
T  8898616 tt 8898617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 125 - 226
Target Start/End: Original strand, 45749841 - 45749942
Alignment:
Q  125 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcat 224  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||||||| |||||||| |||| |||||||||||||    
T  45749841 aggcttaatgatgtgtttcatccttgcaattaggcgtcatttaaaaattagtctttgtaatcgttaatcctgacaatttacacttgcattgtttaatcat 45749940  T
Q  225 tt 226  Q
    ||    
T  45749941 tt 45749942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 120 - 226
Target Start/End: Complemental strand, 28325235 - 28325130
Alignment:
Q  120 aaattaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgttta 219  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||  |||||||||||||  |||||||||||||||| ||||||||    
T  28325235 aaattaggcttaatgatgtgtttcggccttgcaattaggcgtcatttaaaaattagtc-atgtaatcgttaattatggcaatttacccttgcattgttta 28325137  T
Q  220 atcattt 226  Q
    |||||||    
T  28325136 atcattt 28325130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 125 - 226
Target Start/End: Complemental strand, 8898944 - 8898843
Alignment:
Q  125 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcat 224  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||  |||| ||| ||||||||||||| |||||||||||||    
T  8898944 aggcttaatgatgtgtttcgtccttgtaattaggcgtcatttaaaaattagtctctgtaatcactaatactgacaatttacccttgcattgtttaatcat 8898845  T
Q  225 tt 226  Q
    ||    
T  8898844 tt 8898843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 124 - 226
Target Start/End: Complemental strand, 12906087 - 12905985
Alignment:
Q  124 taggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatca 223  Q
    |||||||||||||||||||||||||||||||| | | |||||||||||||| ||  |||||||| |||||||||||||||||||||| ||||||||||||    
T  12906087 taggcttaatgatgtgtttcgtccttgcaatttgacatcatttaaaaattagtccatgtaatcgctaatcctggcaatttacccttgcattgtttaatca 12905988  T
Q  224 ttt 226  Q
    |||    
T  12905987 ttt 12905985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 124 - 226
Target Start/End: Original strand, 37929416 - 37929518
Alignment:
Q  124 taggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatca 223  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| |||| |||||||| ||||||||||||  ||| ||||||||    
T  37929416 taggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgttatcgctaatcctgacaatttacccttacattatttaatca 37929515  T
Q  224 ttt 226  Q
    |||    
T  37929516 ttt 37929518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 128 - 226
Target Start/End: Complemental strand, 44523562 - 44523464
Alignment:
Q  128 cttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| | ||| |||||| ||||| |||||||||||||||| |||||||||||||||    
T  44523562 cttaatgatgtgtttcgtccttgcaattaggcctcatttaaaaattaatatctataatcgctaatcatggcaatttacccttgcattgtttaatcattt 44523464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 125 - 226
Target Start/End: Complemental strand, 31058484 - 31058383
Alignment:
Q  125 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcat 224  Q
    ||||||||||||||||||||||||||||||||| | |||||||||||||| ||  |||||||| ||||| |||||||||||||||| |||||||||||||    
T  31058484 aggcttaatgatgtgtttcgtccttgcaattagacatcatttaaaaattagtcaatgtaatcgataatcttggcaatttacccttgcattgtttaatcat 31058385  T
Q  225 tt 226  Q
    ||    
T  31058384 tt 31058383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 129 - 226
Target Start/End: Complemental strand, 35041037 - 35040940
Alignment:
Q  129 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||||||||||||||||||||| |||||| |||||||||||||||| ||  |||||||| |||||||| ||||||||||||| |||||||||||||||    
T  35041037 ttaatgatgtgtttcgtccttgtaattagccgtcatttaaaaattagtccatgtaatcgctaatcctgacaatttacccttgcattgtttaatcattt 35040940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 123 - 226
Target Start/End: Complemental strand, 32558536 - 32558433
Alignment:
Q  123 ttaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatc 222  Q
    |||||||||||||||||||| |||||| ||||||| |||||||||||||||| |  || |||||| ||||||||  |||||||||||||| |||||||||    
T  32558536 ttaggcttaatgatgtgttttgtccttacaattagacgtcatttaaaaattagttcctataatcgctaatcctgataatttacccttgtaatgtttaatc 32558437  T
Q  223 attt 226  Q
    ||||    
T  32558436 attt 32558433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 126 - 226
Target Start/End: Original strand, 6367562 - 6367662
Alignment:
Q  126 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcatt 225  Q
    |||||||  |||| |||| |||||||||||||| ||| ||||||||||  || ||||||||| |||||||||||||||||||||| ||||||||||||||    
T  6367562 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatt 6367661  T
Q  226 t 226  Q
    |    
T  6367662 t 6367662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 147 - 226
Target Start/End: Original strand, 26024444 - 26024523
Alignment:
Q  147 cttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||||||||||| ||| ||||||||||  |||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  26024444 cttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcctggcaatttacccttgcattgtttaatcattt 26024523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 124 - 226
Target Start/End: Original strand, 7371288 - 7371390
Alignment:
Q  124 taggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatca 223  Q
    |||| |||||||| ||||||||||||||||||||| ||||||||||||||| | |||||||||| | || |||| |||||| ||||| |||||||||| |    
T  7371288 taggtttaatgatatgtttcgtccttgcaattaggtgtcatttaaaaattagtttctgtaatcgctgattctggtaatttatccttgcattgtttaatta 7371387  T
Q  224 ttt 226  Q
    |||    
T  7371388 ttt 7371390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 124 - 226
Target Start/End: Original strand, 35038453 - 35038555
Alignment:
Q  124 taggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatca 223  Q
    |||| ||||| |||||||||||||||||||||| | ||||||||||||||  ||  |||||||||||||||| |||| ||||  ||||||||||||||||    
T  35038453 taggtttaataatgtgtttcgtccttgcaattaagggtcatttaaaaattgatccatgtaatcgttaatcctagcaaattacttttgtattgtttaatca 35038552  T
Q  224 ttt 226  Q
    |||    
T  35038553 ttt 35038555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 124 - 226
Target Start/End: Complemental strand, 36694678 - 36694576
Alignment:
Q  124 taggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatca 223  Q
    |||||||||  |||| |||| |||||||||||||| ||  ||||||||||  |||||||||||| |||||||| ||||||||||||| ||||||||||||    
T  36694678 taggcttaaatatgtatttcatccttgcaattaggtgttgtttaaaaattggtctctgtaatcgctaatcctgacaatttacccttgcattgtttaatca 36694579  T
Q  224 ttt 226  Q
    |||    
T  36694578 ttt 36694576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 124 - 226
Target Start/End: Complemental strand, 36710779 - 36710677
Alignment:
Q  124 taggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatca 223  Q
    |||||||||  |||| |||| |||||||||||||| ||  ||||||||||  |||||||||||| |||||||| ||||||||||||| ||||||||||||    
T  36710779 taggcttaaatatgtatttcatccttgcaattaggtgttgtttaaaaattggtctctgtaatcgctaatcctgacaatttacccttgcattgtttaatca 36710680  T
Q  224 ttt 226  Q
    |||    
T  36710679 ttt 36710677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 124 - 226
Target Start/End: Original strand, 41098731 - 41098833
Alignment:
Q  124 taggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatca 223  Q
    |||||||||  |||| |||| | |||||||||||| ||| ||||||||||  |||||||||||| |||||||| ||||||||||||| ||||||||||||    
T  41098731 taggcttaaatatgtatttcattcttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcctgacaatttacccttgcattgtttaatca 41098830  T
Q  224 ttt 226  Q
    |||    
T  41098831 ttt 41098833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 125 - 210
Target Start/End: Complemental strand, 28011766 - 28011681
Alignment:
Q  125 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttg 210  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||  || ||||||| | |||||||||||||||| |||||    
T  28011766 aggcttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaatcctggcaatttagccttg 28011681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 125 - 226
Target Start/End: Original strand, 28324804 - 28324904
Alignment:
Q  125 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcat 224  Q
    ||||||||||||||||||| |||||||||||||||||| ||| ||||||| |   |||||||| |||||||| ||||||||||||| ||| |||||||||    
T  28324804 aggcttaatgatgtgtttcctccttgcaattaggcgtcgttt-aaaattagttcatgtaatcgctaatcctgacaatttacccttgcattatttaatcat 28324902  T
Q  225 tt 226  Q
    ||    
T  28324903 tt 28324904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 125 - 192
Target Start/End: Complemental strand, 7371596 - 7371529
Alignment:
Q  125 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaat 192  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||| |||||||||||| ||||    
T  7371596 aggcttaacgatgtgtttcgtccttgcaattagacgtcatttaaaaattagtctctgtaatcgctaat 7371529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 123 - 226
Target Start/End: Complemental strand, 23209758 - 23209655
Alignment:
Q  123 ttaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatc 222  Q
    ||||||||||  |||| |||| |||||||||||||| ||| ||||||||||  ||  |||||||| |||||||||||||||||||||| |||||| ||||    
T  23209758 ttaggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccttgtaatcgctaatcctggcaatttacccttgcattgttcaatc 23209659  T
Q  223 attt 226  Q
    ||||    
T  23209658 attt 23209655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 124 - 226
Target Start/End: Original strand, 19515817 - 19515919
Alignment:
Q  124 taggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatca 223  Q
    |||||||||  |||| |||| |||||||||||||| ||| ||||||||||  ||| ||||||||||||| |||| |||||||||||| |||||||||| |    
T  19515817 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtctttgtaatcgttaattctggaaatttacccttgcattgtttaatta 19515916  T
Q  224 ttt 226  Q
    |||    
T  19515917 ttt 19515919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 124 - 210
Target Start/End: Original strand, 24905165 - 24905251
Alignment:
Q  124 taggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttg 210  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||||  || ||||||| | ||||||| |||||||| |||||    
T  24905165 taggcttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaatccttgcaatttagccttg 24905251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 125 - 187
Target Start/End: Complemental strand, 25885420 - 25885358
Alignment:
Q  125 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcg 187  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||    
T  25885420 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccttgtaatcg 25885358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 125 - 226
Target Start/End: Original strand, 7820953 - 7821054
Alignment:
Q  125 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcat 224  Q
    ||||||||  |||| |||| |||||||||||||| ||| ||||| ||||| || ||||||||| |||||||  ||||||||||||| |||||||||||||    
T  7820953 aggcttaaatatgtatttcatccttgcaattaggggtcctttaataattagtccctgtaatcgctaatccttacaatttacccttgcattgtttaatcat 7821052  T
Q  225 tt 226  Q
    ||    
T  7821053 tt 7821054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 125 - 226
Target Start/End: Complemental strand, 17662279 - 17662178
Alignment:
Q  125 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcat 224  Q
    ||||||||  |||| |||| ||||||||||| || ||| ||||||||||  |  || ||||||||||||||||||||||||||||| |||||||||||||    
T  17662279 aggcttaaatatgtatttcatccttgcaatttggggtcgtttaaaaattggttcctttaatcgttaatcctggcaatttacccttgcattgtttaatcat 17662180  T
Q  225 tt 226  Q
    ||    
T  17662179 tt 17662178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 145 - 226
Target Start/End: Original strand, 25647903 - 25647984
Alignment:
Q  145 tccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||||||||||||| ||| ||||||||||  || ||||||||||||||||||||||||||||| || ||| |||||||||||    
T  25647903 tccttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatcctggcaatttacccctgcattatttaatcattt 25647984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 135 - 226
Target Start/End: Original strand, 4960549 - 4960640
Alignment:
Q  135 atgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||| |||| || ||||||||||| ||| |||||||||| |||| |||| ||| ||||||| |||||||||||||| |||||||||||||||    
T  4960549 atgtatttcatcattgcaattaggggtcgtttaaaaattgctctttgtattcgctaatccttgcaatttacccttgcattgtttaatcattt 4960640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 135 - 226
Target Start/End: Complemental strand, 13914486 - 13914395
Alignment:
Q  135 atgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||| |||| |||||||||||||  ||  ||||||||||  ||  |||||||| ||||||||||||||||||||||||||||||||||||||    
T  13914486 atgtatttcatccttgcaattagaggttgtttaaaaattggtccatgtaatcgctaatcctggcaatttacccttgtattgtttaatcattt 13914395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 124 - 226
Target Start/End: Original strand, 44522145 - 44522247
Alignment:
Q  124 taggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatca 223  Q
    |||||||||  ||||||||||||| ||||||||||  |||||||||||||   | ||||||||||||||||| |||| ||| |||||||  |||||||||    
T  44522145 taggcttaagtatgtgtttcgtccctgcaattagggatcatttaaaaattggaccctgtaatcgttaatcctagcaaattatccttgtaaagtttaatca 44522244  T
Q  224 ttt 226  Q
    |||    
T  44522245 ttt 44522247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 126 - 226
Target Start/End: Original strand, 30711327 - 30711427
Alignment:
Q  126 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcatt 225  Q
    |||||||  |||| |||| |||||||||||||| ||  ||||||||||  ||||| |||||| ||||||| |||||||| ||||| ||||||||||||||    
T  30711327 ggcttaaatatgtatttcatccttgcaattaggggttgtttaaaaattgatctctataatcgctaatcctagcaatttatccttgcattgtttaatcatt 30711426  T
Q  226 t 226  Q
    |    
T  30711427 t 30711427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 126 - 226
Target Start/End: Original strand, 34464449 - 34464549
Alignment:
Q  126 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcatt 225  Q
    |||||||  |||| |||| |||||||||||||| ||| ||||||||||  ||  |||||||| ||||| |||||||||||||||| | ||||||||||||    
T  34464449 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccatgtaatcgctaatcttggcaatttacccttgcaatgtttaatcatt 34464548  T
Q  226 t 226  Q
    |    
T  34464549 t 34464549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 118 - 226
Target Start/End: Complemental strand, 34464885 - 34464777
Alignment:
Q  118 aaaaattaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtt 217  Q
    |||| ||||||||||  |||| |||| |||||||||||||| ||  ||||||||||  ||  |||||||| ||||| |||||||||||||||| | ||||    
T  34464885 aaaatttaggcttaaatatgtatttcatccttgcaattaggggttgtttaaaaattggtccatgtaatcgctaatcttggcaatttacccttgcaatgtt 34464786  T
Q  218 taatcattt 226  Q
    |||||||||    
T  34464785 taatcattt 34464777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 126 - 226
Target Start/End: Original strand, 40772507 - 40772607
Alignment:
Q  126 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcatt 225  Q
    |||||||  |||| |||| |||||||||||| | ||| ||||||||||  || ||||||||| |||||||| |||||||| |||| ||||||||||||||    
T  40772507 ggcttaaatatgtatttcatccttgcaattatgggtcgtttaaaaattggtccctgtaatcgctaatcctgacaatttactcttgcattgtttaatcatt 40772606  T
Q  226 t 226  Q
    |    
T  40772607 t 40772607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 135 - 226
Target Start/End: Complemental strand, 40210789 - 40210698
Alignment:
Q  135 atgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||| |||| || ||||||||||| | | ||||||||||  ||| |||||||| |||| ||||||||||||||||| |||||||||||||||    
T  40210789 atgtatttcatcattgcaattaggggccgtttaaaaattggtctttgtaatcgctaattctggcaatttacccttgcattgtttaatcattt 40210698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 135 - 226
Target Start/End: Original strand, 42248482 - 42248573
Alignment:
Q  135 atgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||| |||| |||||||||||||  ||| ||||||||||  ||| |||| ||| ||||| |||||||||||||||| |||||||||||||||    
T  42248482 atgtatttcatccttgcaattagtggtcgtttaaaaattggtctttgtagtcgctaatcgtggcaatttacccttgcattgtttaatcattt 42248573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 24009955 - 24009869
Alignment:
Q  140 tttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||| ||||||||||||||  || ||||||||||  ||  ||||||||  ||||||||||||||||||||| |||||||||||||||    
T  24009955 tttcatccttgcaattagggatcgtttaaaaattggtcattgtaatcgccaatcctggcaatttacccttgcattgtttaatcattt 24009869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 126 - 204
Target Start/End: Original strand, 33442594 - 33442672
Alignment:
Q  126 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaattta 204  Q
    |||||| |||||||||| | ||||||||||||||| ||||||||||||  |||||||||| | ||||||||||| ||||    
T  33442594 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtctctgtaattgctaatcctggcatttta 33442672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 126 - 204
Target Start/End: Complemental strand, 52134465 - 52134387
Alignment:
Q  126 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaattta 204  Q
    |||||| |||||||||| | ||||||||||||||| ||||||||||||  || ||||||| ||||||||||||| ||||    
T  52134465 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgttaatcctggcatttta 52134387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 145 - 226
Target Start/End: Original strand, 14878990 - 14879071
Alignment:
Q  145 tccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||||||||||||| ||| ||||||||||  |   |||||||| ||||| |||||||||||||||| |||||||||||||||    
T  14878990 tccttgcaattaggggtcgtttaaaaattggttcatgtaatcgctaatcttggcaatttacccttgcattgtttaatcattt 14879071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 125 - 226
Target Start/End: Complemental strand, 37578621 - 37578520
Alignment:
Q  125 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcat 224  Q
    ||||||||  |||| |||| ||||||||||| || ||| ||||||||||  | | |||||||| |||||||||||||||||||||  |||| ||||||||    
T  37578621 aggcttaaatatgtatttcatccttgcaattgggggtcgtttaaaaattggtttttgtaatcgctaatcctggcaatttacccttacattgattaatcat 37578522  T
Q  225 tt 226  Q
    ||    
T  37578521 tt 37578520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 210
Target Start/End: Original strand, 31197065 - 31197149
Alignment:
Q  126 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttg 210  Q
    |||||||  |||| |||| ||| |||||||||| ||||||||||||||  |||||||| ||||||||||||| || |||||||||    
T  31197065 ggcttaaatatgtatttcatccctgcaattaggggtcatttaaaaatttgtctctgtattcgttaatcctggaaaattacccttg 31197149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 179 - 226
Target Start/End: Original strand, 1103514 - 1103561
Alignment:
Q  179 ctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    ||||||||| |||||||||||||||||||||| |||||||||||||||    
T  1103514 ctgtaatcgctaatcctggcaatttacccttgcattgtttaatcattt 1103561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 123 - 226
Target Start/End: Original strand, 1841456 - 1841559
Alignment:
Q  123 ttaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatc 222  Q
    ||||||||||  |||| |||| |  ||||||||| | ||| ||||||||||  |||| ||||||| |||||||| ||||||||||||  |||||||||||    
T  1841456 ttaggcttaaacatgtatttcatatttgcaattaagagtcgtttaaaaattggtctccgtaatcgctaatcctgacaatttacccttacattgtttaatc 1841555  T
Q  223 attt 226  Q
    ||||    
T  1841556 attt 1841559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 123 - 170
Target Start/End: Original strand, 25884698 - 25884745
Alignment:
Q  123 ttaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaa 170  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||||    
T  25884698 ttaggcttaatgatgtgtttcgtcattgcaattagacgtcatttaaaa 25884745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 123 - 226
Target Start/End: Original strand, 35152340 - 35152443
Alignment:
Q  123 ttaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatc 222  Q
    ||||||||||  |||| |||| |||||||||||||  ||| ||||||||||  || || |||||| |||| ||| ||||||||||||  |||||||||||    
T  35152340 ttaggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtccctataatcgctaatactgccaatttacccttacattgtttaatc 35152439  T
Q  223 attt 226  Q
    ||||    
T  35152440 attt 35152443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 135 - 226
Target Start/End: Original strand, 46163039 - 46163130
Alignment:
Q  135 atgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||| |||| || ||| ||||||| ||| ||||||||||  ||  |||||||| |||||||| ||||||||||||| |||||||||||||||    
T  46163039 atgtatttcatcattgtaattaggggtcgtttaaaaattggtccatgtaatcgctaatcctgacaatttacccttgcattgtttaatcattt 46163130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 124 - 226
Target Start/End: Original strand, 5734008 - 5734109
Alignment:
Q  124 taggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatca 223  Q
    |||||||||  |||| ||||||||||||||||||| ||| ||||||||||  ||  |||||||| ||||||| |||| |||  |||| ||||||||||||    
T  5734008 taggcttaaatatgtatttcgtccttgcaattaggggtcgtttaaaaattggtc-atgtaatcgctaatccttgcaaattagtcttgcattgtttaatca 5734106  T
Q  224 ttt 226  Q
    |||    
T  5734107 ttt 5734109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 124 - 226
Target Start/End: Complemental strand, 47999522 - 47999420
Alignment:
Q  124 taggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatca 223  Q
    |||||||||  |||| |||  |||||| ||||||| ||| ||||||||||  || ||||||||| ||||| ||||||||||||| || ||| ||||||||    
T  47999522 taggcttaaatatgtatttgatccttgtaattaggggtcgtttaaaaattggtccctgtaatcgctaatcttggcaatttacccctgcattatttaatca 47999423  T
Q  224 ttt 226  Q
    |||    
T  47999422 ttt 47999420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 122 - 204
Target Start/End: Original strand, 52134064 - 52134146
Alignment:
Q  122 attaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaattta 204  Q
    |||||||||| |||||||||| | |||||||||||||||  |||||||||||  || ||||||| | ||||||||||| ||||    
T  52134064 attaggcttattgatgtgtttagcccttgcaattaggcggtatttaaaaattcgtccctgtaattgctaatcctggcatttta 52134146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 226
Target Start/End: Original strand, 32917279 - 32917360
Alignment:
Q  145 tccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    ||||||||||||||  || ||||||||||  || ||||||||| |||||||| || ||||| |||| |||||||||||||||    
T  32917279 tccttgcaattaggaatcgtttaaaaattggtccctgtaatcgctaatcctgacagtttactcttgcattgtttaatcattt 32917360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 128 - 204
Target Start/End: Complemental strand, 33442989 - 33442913
Alignment:
Q  128 cttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaattta 204  Q
    |||| |||||||||| | ||||||||||||||| ||||||||||||  || ||||||| | ||||||||||| ||||    
T  33442989 cttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 33442913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 226
Target Start/End: Original strand, 17691228 - 17691319
Alignment:
Q  135 atgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||| |||||||||| ||| |||| ||| ||||||||||  || ||||||||| ||||||| |||| |||  |||| |||||||||||||||    
T  17691228 atgtatttcgtccttacaagtaggggtcgtttaaaaattggtccctgtaatcgctaatccttgcaaattagtcttgcattgtttaatcattt 17691319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 226
Target Start/End: Complemental strand, 19018060 - 19017957
Alignment:
Q  123 ttaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatc 222  Q
    ||||||||||  |||| |||  ||||||||||||   ||| ||||||||||  ||  |||| ||| |||||||||||||||||||||| ||| |||||||    
T  19018060 ttaggcttaaatatgtattttatccttgcaattacaggtcgtttaaaaattggtccatgtattcgctaatcctggcaatttacccttgcattatttaatc 19017961  T
Q  223 attt 226  Q
    ||||    
T  19017960 attt 19017957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 135 - 201
Target Start/End: Complemental strand, 35152749 - 35152683
Alignment:
Q  135 atgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaat 201  Q
    |||| |||| |||||||||||||| ||| ||||||||||| |||||||| ||| ||||||| |||||    
T  35152749 atgtatttcatccttgcaattaggggtcgtttaaaaattagtctctgtattcgctaatccttgcaat 35152683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 200
Target Start/End: Complemental strand, 30711758 - 30711681
Alignment:
Q  123 ttaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaa 200  Q
    ||||||||||  |||| |||| |||||||||||||| ||| ||||||||||  |||||||| ||| ||||||| ||||    
T  30711758 ttaggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtctctgtattcgctaatccttgcaa 30711681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 200
Target Start/End: Original strand, 35473628 - 35473705
Alignment:
Q  123 ttaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaa 200  Q
    ||||||||||  |||| |||  |||||||||||||| ||| ||||||||||  || ||||||||| ||||||||||||    
T  35473628 ttaggcttaaatatgtatttaatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaa 35473705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 226
Target Start/End: Complemental strand, 183623 - 183519
Alignment:
Q  123 ttaggcttaatgatgtgtttcgtccttgcaattaggcg-tcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaat 221  Q
    ||||||||||  |||| |||  |||||| ||||||| | || ||||||||||  || ||||||||| ||||||| ||||||||||| || ||| ||||||    
T  183623 ttaggcttaaatatgtatttgatccttgtaattagggggtcgtttaaaaattggtccctgtaatcgctaatcctagcaatttacccctgcattatttaat 183524  T
Q  222 cattt 226  Q
    |||||    
T  183523 cattt 183519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 199
Target Start/End: Original strand, 9443581 - 9443645
Alignment:
Q  135 atgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggca 199  Q
    |||||||| |||||||||| |||| |||||||||||| |  |||||||| || ||||||||||||    
T  9443581 atgtgtttagtccttgcaaataggggtcatttaaaaaatggtctctgtattccttaatcctggca 9443645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 204
Target Start/End: Original strand, 31514312 - 31514396
Alignment:
Q  120 aaattaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaattta 204  Q
    |||| ||| ||| |||||||||| | ||||||||||||||| ||||||||||||  |  ||||||| |||||| |||||| ||||    
T  31514312 aaataaggtttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgttcctgtaattgttaattctggcatttta 31514396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 226
Target Start/End: Complemental strand, 17692604 - 17692513
Alignment:
Q  135 atgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||| |||| |||||||||||||| ||| |||||||||   || |||| |||| ||||||| |||| ||| | ||| |||||||||||||||    
T  17692604 atgtatttcatccttgcaattaggggtcgtttaaaaatcggtccctgttatcgctaatccttgcaaattagctttgcattgtttaatcattt 17692513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 204
Target Start/End: Complemental strand, 31514707 - 31514636
Alignment:
Q  133 tgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaattta 204  Q
    |||||||||| | |||| |||||||||| ||||||||||||  || ||||||| | ||||||||||| ||||    
T  31514707 tgatgtgtttagcccttacaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 31514636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 209
Target Start/End: Original strand, 10303932 - 10304006
Alignment:
Q  135 atgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttaccctt 209  Q
    |||||||| |||  ||||| |||| |||||||||||| |  ||| |||| ||||||||||||||||||| |||||    
T  10303932 atgtgtttggtctctgcaaataggagtcatttaaaaaatgatctatgtattcgttaatcctggcaatttgccctt 10304006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 205
Target Start/End: Original strand, 32132313 - 32132383
Alignment:
Q  135 atgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttac 205  Q
    ||||||||||||| | |||||||  ||||||||||||||  ||  |||||||||||||||| |||| ||||    
T  32132313 atgtgtttcgtccctccaattagtggtcatttaaaaattcgtccatgtaatcgttaatccttgcaaattac 32132383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 201
Target Start/End: Original strand, 42533033 - 42533099
Alignment:
Q  135 atgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaat 201  Q
    |||| |||| |||||||||||||| ||| ||||||||||| ||  |||| ||||||||||| |||||    
T  42533033 atgtatttcatccttgcaattaggggtcgtttaaaaattagtccatgtattcgttaatccttgcaat 42533099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 226
Target Start/End: Original strand, 34849030 - 34849111
Alignment:
Q  145 tccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||||||||||||| ||| ||||||||||  || ||||| ||| ||||||| |||| ||||||||| |   |||||||||||    
T  34849030 tccttgcaattaggggtcttttaaaaattggtccctgtattcgctaatccttgcaaattacccttgcaaaatttaatcattt 34849111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 226
Target Start/End: Complemental strand, 34850474 - 34850393
Alignment:
Q  145 tccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||||||||||||| ||| ||||||||||  || ||||| ||| ||||||| |||| ||||||||| |   |||||||||||    
T  34850474 tccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaattacccttgcaaaatttaatcattt 34850393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 200
Target Start/End: Original strand, 36694280 - 36694356
Alignment:
Q  124 taggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaa 200  Q
    |||||||||  |||| |||| |||||||||||||| ||| ||||||||||  ||| |||| ||| ||||||| ||||    
T  36694280 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtctatgtattcgctaatccttgcaa 36694356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 200
Target Start/End: Original strand, 36710381 - 36710457
Alignment:
Q  124 taggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaa 200  Q
    |||||||||  |||| |||| |||||||||||||| ||| ||||||||||  ||| |||| ||| ||||||| ||||    
T  36710381 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtctatgtattcgctaatccttgcaa 36710457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388 (Bit Score: 88; Significance: 2e-42; HSPs: 2)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 123 - 226
Target Start/End: Complemental strand, 12668 - 12565
Alignment:
Q  123 ttaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatc 222  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||    
T  12668 ttaggtttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgttaatcctggcaatttacccttgcattgtttaatc 12569  T
Q  223 attt 226  Q
    ||||    
T  12568 attt 12565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 129 - 226
Target Start/End: Original strand, 12249 - 12340
Alignment:
Q  129 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||||||||||||||||| || |||||| || | || |||||||||      ||||||| |||||||||||||||||||||| |||||||||||||||    
T  12249 ttaatgatgtgtttcgtcgttacaattaagcattatataaaaatta------gtaatcgctaatcctggcaatttacccttgcattgtttaatcattt 12340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 87; Significance: 8e-42; HSPs: 58)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 124 - 226
Target Start/End: Complemental strand, 17544476 - 17544374
Alignment:
Q  124 taggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatca 223  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||| ||||||||||||    
T  17544476 taggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagttcctgtaatcgttaatcctggcaatttacccttgcattgtttaatca 17544377  T
Q  224 ttt 226  Q
    |||    
T  17544376 ttt 17544374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 125 - 226
Target Start/End: Complemental strand, 33871765 - 33871664
Alignment:
Q  125 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcat 224  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||  |||||||||||||||||||||| |||||||||||||    
T  33871765 aggcttaatgatgtgtttcgtccttgcaattaggcgccatttaaaaattagtctctgtaatcagtaatcctggcaatttacccttgcattgtttaatcat 33871666  T
Q  225 tt 226  Q
    ||    
T  33871665 tt 33871664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 126 - 226
Target Start/End: Original strand, 8875449 - 8875549
Alignment:
Q  126 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcatt 225  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||||||| |||| ||||||||||||||    
T  8875449 ggcttaatgatgtgtttcgtccttgcaattaagcgtcatttaaaaattagtccctgtaatcgttaatcctggcaatttacacttgcattgtttaatcatt 8875548  T
Q  226 t 226  Q
    |    
T  8875549 t 8875549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 126 - 226
Target Start/End: Original strand, 20152781 - 20152881
Alignment:
Q  126 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcatt 225  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||| ||||||||| |||||||||||| ||||||||||||||    
T  20152781 ggcttaatgatgtgtttcgtccatgcaattaagcgtcatttaaaaattagtctctgtaatcgctaatcctggaaatttacccttgcattgtttaatcatt 20152880  T
Q  226 t 226  Q
    |    
T  20152881 t 20152881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 126 - 226
Target Start/End: Original strand, 33871339 - 33871439
Alignment:
Q  126 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcatt 225  Q
    ||||||||||||||||| ||||||||||||| | ||||||||||||||| || ||||||||| |||| ||||||||||||||||| ||||||||||||||    
T  33871339 ggcttaatgatgtgttttgtccttgcaattaagtgtcatttaaaaattagtccctgtaatcgctaattctggcaatttacccttgcattgtttaatcatt 33871438  T
Q  226 t 226  Q
    |    
T  33871439 t 33871439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 124 - 226
Target Start/End: Complemental strand, 20153343 - 20153244
Alignment:
Q  124 taggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatca 223  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||  |||||||| |||||   |||||||||||||| ||||||||||||    
T  20153343 taggcttaatgatgtgtttcgtccttgcaattaggtgtcatttaaaaattagtccttgtaatcgctaatc---gcaatttacccttgcattgtttaatca 20153247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 125 - 226
Target Start/End: Complemental strand, 3656845 - 3656744
Alignment:
Q  125 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcat 224  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||||| ||| |||||||| |||| |||  |||||| ||||| |||||||||||||    
T  3656845 aggcttaatgatgtgtttcgaccttgcaattagacgtcatttaaaaattagtctttgtaatcgctaattctgataatttatccttgcattgtttaatcat 3656746  T
Q  225 tt 226  Q
    ||    
T  3656745 tt 3656744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 132 - 201
Target Start/End: Complemental strand, 8875687 - 8875618
Alignment:
Q  132 atgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaat 201  Q
    ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  8875687 atgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgttaatcctggcaat 8875618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 119 - 226
Target Start/End: Original strand, 5993882 - 5993989
Alignment:
Q  119 aaaattaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgttt 218  Q
    ||||||||||||||  |||| |||| |||||||||||||| ||| ||||||||||  || ||||||||| |||| ||||||||||||||||| |||||||    
T  5993882 aaaattaggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaattctggcaatttacccttgcattgttt 5993981  T
Q  219 aatcattt 226  Q
    ||||||||    
T  5993982 aatcattt 5993989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 135 - 226
Target Start/End: Original strand, 39453309 - 39453400
Alignment:
Q  135 atgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||| |||| |||||||||||||| ||| ||||||||||  |||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  39453309 atgtatttcatccttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcctggcaatttacccttgcattgtttaatcattt 39453400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 125 - 226
Target Start/End: Complemental strand, 16157284 - 16157183
Alignment:
Q  125 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcat 224  Q
    ||||||||  |||| |||| |||||||||||||| ||| ||||||||||  || || ||||||||||||||| ||||||||||||| |||||||||||||    
T  16157284 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctataatcgttaatcctgacaatttacccttgcattgtttaatcat 16157185  T
Q  225 tt 226  Q
    ||    
T  16157184 tt 16157183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 126 - 226
Target Start/End: Complemental strand, 21288083 - 21287983
Alignment:
Q  126 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcatt 225  Q
    ||||||||||||||||| ||||||| |||||| |||| ||||||||||| ||  |||||||| ||||| |||||||  ||||||| ||||||||||||||    
T  21288083 ggcttaatgatgtgttttgtccttgtaattagacgtcgtttaaaaattaatccatgtaatcgctaatcatggcaatacacccttgcattgtttaatcatt 21287984  T
Q  226 t 226  Q
    |    
T  21287983 t 21287983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 135 - 226
Target Start/End: Original strand, 16082986 - 16083077
Alignment:
Q  135 atgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||| |||| ||||| |||||||| ||  ||||||||||| || ||||||||| |||||||||||||||||||||| |||||||||||||||    
T  16082986 atgtatttcatccttccaattaggggttgtttaaaaattagtccctgtaatcgataatcctggcaatttacccttgcattgtttaatcattt 16083077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 135 - 226
Target Start/End: Complemental strand, 19892727 - 19892636
Alignment:
Q  135 atgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||| |||| |||||||||||||  ||| ||||||||||  ||||||||||||||||||||  ||||||||||||| |||||||||||||||    
T  19892727 atgtatttcatccttgcaattagaggtcgtttaaaaattggtctctgtaatcgttaatcctaacaatttacccttgcattgtttaatcattt 19892636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 135 - 226
Target Start/End: Original strand, 24141461 - 24141552
Alignment:
Q  135 atgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    ||||||||||||| ||||||||| |||||||||||||||  || |||||||||||||||||||||| ||| ||||| |  ||||||||||||    
T  24141461 atgtgtttcgtccctgcaattagacgtcatttaaaaattggtccctgtaatcgttaatcctggcaaattagccttgcaaagtttaatcattt 24141552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 135 - 226
Target Start/End: Original strand, 35512157 - 35512248
Alignment:
Q  135 atgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||| |||| |||||||||||| | ||| ||||||||||  || ||||||||| |||||||||||||||||||||| |||||||||||||||    
T  35512157 atgtatttcatccttgcaattaagggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcattt 35512248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 124 - 226
Target Start/End: Complemental strand, 20814565 - 20814463
Alignment:
Q  124 taggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatca 223  Q
    |||||||||  |||| |||| |||||||||||||| ||| ||||||||||  || ||||||||| ||||||| ||||||||| |||| ||||||||||||    
T  20814565 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtcactgtaatcgctaatcctagcaatttacacttgcattgtttaatca 20814466  T
Q  224 ttt 226  Q
    |||    
T  20814465 ttt 20814463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 124 - 226
Target Start/End: Original strand, 20840531 - 20840633
Alignment:
Q  124 taggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatca 223  Q
    |||||||||  |||| |||| |||||||||||||| ||| ||||||||||  |  ||||||||||||||||| |||||||||||||| |||||||||| |    
T  20840531 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtacctgtaatcgttaatcctagcaatttacccttgcattgtttaatga 20840630  T
Q  224 ttt 226  Q
    |||    
T  20840631 ttt 20840633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 38475413 - 38475327
Alignment:
Q  140 tttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||| |||||||||||||| ||| ||||||||||  ||  ||||||||||||||||| ||||||||||||| |||||||||||||||    
T  38475413 tttcatccttgcaattaggggtcgtttaaaaattggtccatgtaatcgttaatcctgacaatttacccttgcattgtttaatcattt 38475327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 145 - 226
Target Start/End: Complemental strand, 3529251 - 3529170
Alignment:
Q  145 tccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||||||||||||| ||| ||||||||||  || ||||||||||||||||||||||||||||| |  |||||||||||||||    
T  3529251 tccttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatcctggcaatttacccctacattgtttaatcattt 3529170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 125 - 210
Target Start/End: Complemental strand, 6758263 - 6758178
Alignment:
Q  125 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttg 210  Q
    ||||||||||||||| || ||||||||||||||||||| ||||||||||  || ||||||| |||||| ||||||||||| |||||    
T  6758263 aggcttaatgatgtgattagtccttgcaattaggcgtcgtttaaaaattcgtccctgtaattgttaattctggcaatttaaccttg 6758178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 145 - 226
Target Start/End: Original strand, 11761768 - 11761849
Alignment:
Q  145 tccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||||||||||||| ||| ||||||||||  || ||||||||| ||||||||||||||||||| || |||||||||||||||    
T  11761768 tccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccctgcattgtttaatcattt 11761849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 141 - 226
Target Start/End: Original strand, 22298557 - 22298642
Alignment:
Q  141 ttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||||| ||||||||||||||||||||||||||| ||  |||||||| |||||  ||||||||||||||  |||||||||||||||    
T  22298557 ttcgtcattgcaattaggcgtcatttaaaaattagtccatgtaatcgctaatcggggcaatttacccttacattgtttaatcattt 22298642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 119 - 204
Target Start/End: Original strand, 1505960 - 1506045
Alignment:
Q  119 aaaattaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaattta 204  Q
    ||||||||||||| |||||||||| | ||||||||||||||| ||||||||||||  || ||||||| | ||||||||||| ||||    
T  1505960 aaaattaggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 1506045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 145 - 226
Target Start/End: Original strand, 13962883 - 13962964
Alignment:
Q  145 tccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||||||||||||| ||| ||||||||||  || ||||||| | ||||||||| |||||||||||| |||||||||||||||    
T  13962883 tccttgcaattaggggtcgtttaaaaattggtccctgtaattgctaatcctggtaatttacccttgcattgtttaatcattt 13962964  T

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Target: chr5; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 145 - 226
Target Start/End: Complemental strand, 24547534 - 24547453
Alignment:
Q  145 tccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||||||||||||| ||| ||||||||||  ||  | |||||| |||||||||||||||||||||| |||||||||||||||    
T  24547534 tccttgcaattaggggtcgtttaaaaattggtccttataatcgctaatcctggcaatttacccttgcattgtttaatcattt 24547453  T

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Target: chr5; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 145 - 226
Target Start/End: Original strand, 27587167 - 27587248
Alignment:
Q  145 tccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||||||||||||| ||| ||||||||||  || ||||||||| ||||||||||||||||||| || || ||||||||||||    
T  27587167 tccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccctgcatcgtttaatcattt 27587248  T

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Target: chr5; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 135 - 226
Target Start/End: Complemental strand, 5024437 - 5024346
Alignment:
Q  135 atgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||| |||| |||||||||||||| ||| ||||||||||  ||  |||||||| |||||||| ||||||||| ||| |||||||||||||||    
T  5024437 atgtatttcatccttgcaattaggggtcgtttaaaaattggtcattgtaatcgctaatcctgacaatttaccattgcattgtttaatcattt 5024346  T

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Target: chr5; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 135 - 226
Target Start/End: Complemental strand, 13362647 - 13362556
Alignment:
Q  135 atgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||| |||| || ||||||||||| ||| ||||||||||  ||  |||||||| ||||| |||||||||||||||| |||||||||||||||    
T  13362647 atgtatttcatcattgcaattaggggtcgtttaaaaattggtccttgtaatcgctaatcatggcaatttacccttgcattgtttaatcattt 13362556  T

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Target: chr5; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 135 - 226
Target Start/End: Original strand, 32242251 - 32242342
Alignment:
Q  135 atgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||| |||| |||||||||||||| ||| ||||||||||  || ||||||| | ||||| ||||||||||| |||| |||||||||||||||    
T  32242251 atgtatttcatccttgcaattaggggtcgtttaaaaattgatccctgtaatagctaatcatggcaatttactcttgcattgtttaatcattt 32242342  T

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Target: chr5; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 135 - 226
Target Start/End: Complemental strand, 40150233 - 40150142
Alignment:
Q  135 atgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||||||||||||||||||||||| ||||||| ||||||  || ||||||||||||||||| | || ||||||||  |  ||||||||||||    
T  40150233 atgtgtttcgtccttgcaattaggggtcattttaaaattggtccctgtaatcgttaatcctagaaaattaccctttcaaagtttaatcattt 40150142  T

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Target: chr5; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 17202413 - 17202499
Alignment:
Q  140 tttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||| ||||| |||||||| ||| ||||||||||  || ||||||||| |||||||| ||||||||||||| ||||||||| |||||    
T  17202413 tttcatccttccaattaggggtcgtttaaaaattggtcactgtaatcgctaatcctgacaatttacccttgcattgtttaagcattt 17202499  T

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Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 145 - 226
Target Start/End: Complemental strand, 28771247 - 28771166
Alignment:
Q  145 tccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||||| ||||||| ||| ||||||||||  ||  |||||||| ||||| ||||||||||||| ||||||||||||||||||    
T  28771247 tccttgtaattaggggtcgtttaaaaattggtccatgtaatcgctaatcttggcaatttacccctgtattgtttaatcattt 28771166  T

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Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 125 - 210
Target Start/End: Original strand, 41930515 - 41930600
Alignment:
Q  125 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttg 210  Q
    ||||||||||||||| || ||||||||||||||  ||| ||||||||||  || ||||||| | |||||||||||||||| |||||    
T  41930515 aggcttaatgatgtgattagtccttgcaattagaggtcgtttaaaaatttgtccctgtaattgctaatcctggcaatttagccttg 41930600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 129 - 210
Target Start/End: Complemental strand, 41930910 - 41930829
Alignment:
Q  129 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttg 210  Q
    ||||||||||| || ||||||| ||||||||||||||||||||||  || ||||||| | ||||||| |||||||| |||||    
T  41930910 ttaatgatgtgattagtccttgtaattaggcgtcatttaaaaattcgtccctgtaattgctaatccttgcaatttagccttg 41930829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 197
Target Start/End: Original strand, 297009 - 297085
Alignment:
Q  121 aattaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctgg 197  Q
    ||||||||||| |||||||||| | ||||||||||||||| ||||||||||||  || ||||||| | |||||||||    
T  297009 aattaggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctgg 297085  T

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Target: chr5; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 144 - 204
Target Start/End: Original strand, 6757883 - 6757943
Alignment:
Q  144 gtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaattta 204  Q
    ||||||||||||||||||||||||||||||  || ||||||| | ||||||||||||||||    
T  6757883 gtccttgcaattaggcgtcatttaaaaatttgtccctgtaattgctaatcctggcaattta 6757943  T

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Target: chr5; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 147 - 226
Target Start/End: Original strand, 186440 - 186519
Alignment:
Q  147 cttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||| ||||||| ||| ||||||||||| ||  ||||||||||||| |||| |||||| ||||| |||||||||||||||    
T  186440 cttgaaattaggggtcgtttaaaaattagtcattgtaatcgttaattctggaaatttaaccttgcattgtttaatcattt 186519  T

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Target: chr5; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 155 - 226
Target Start/End: Original strand, 17544077 - 17544148
Alignment:
Q  155 taggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    ||||||| |||||||||||| || ||||||| | |||||||| |||||||| |||| |||||||||||||||    
T  17544077 taggcgtgatttaaaaattagtccctgtaattgctaatcctgacaatttactcttgcattgtttaatcattt 17544148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 125 - 226
Target Start/End: Original strand, 18670201 - 18670299
Alignment:
Q  125 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcat 224  Q
    ||||||||  |||| |||| ||||||||| |||| ||| ||||||||||  || ||||||||| |||||   |||||||||||||| |||||||||||||    
T  18670201 aggcttaaatatgtatttcatccttgcaagtaggggtcgtttaaaaattggtccctgtaatcgctaatc---gcaatttacccttgcattgtttaatcat 18670297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 125 - 204
Target Start/End: Complemental strand, 31482800 - 31482721
Alignment:
Q  125 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaattta 204  Q
    ||||||| |||||||||| | ||||||||||||||| ||||||||||||  || ||||||| | ||||||||||| ||||    
T  31482800 aggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaatttgtccctgtaattgctaatcctggcatttta 31482721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 135 - 226
Target Start/End: Original strand, 38442077 - 38442168
Alignment:
Q  135 atgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||| |||| || ||||||||||| || |||||||||||  ||  |||||||| |||||||| |||||||| |||| |||||||||||||||    
T  38442077 atgtatttcatcgttgcaattaggggttatttaaaaattggtcattgtaatcgctaatcctgacaatttactcttgcattgtttaatcattt 38442168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 180 - 226
Target Start/End: Original strand, 21287797 - 21287843
Alignment:
Q  180 tgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||||||| |||| |||||||||||||||||||||||||||||||||    
T  21287797 tgtaatcgctaattctggcaatttacccttgtattgtttaatcattt 21287843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 126 - 204
Target Start/End: Original strand, 31482402 - 31482480
Alignment:
Q  126 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaattta 204  Q
    |||||| |||||||||| | ||||||||||||||| ||||||||||||  || ||||||| | ||||||||||| ||||    
T  31482402 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 31482480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 135 - 226
Target Start/End: Original strand, 18247095 - 18247184
Alignment:
Q  135 atgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||| |||| |||||||||||||| ||| ||||||||||  ||  |||||||| ||||  |||||||||||||||| ||| |||||||||||    
T  18247095 atgtatttcatccttgcaattaggggtcgtttaaaaattggtccatgtaatcgctaat--tggcaatttacccttgcattatttaatcattt 18247184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 150 - 226
Target Start/End: Complemental strand, 35920588 - 35920512
Alignment:
Q  150 gcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    ||||||||| ||| ||||||||||  || ||||||||| |||||||| ||||||| ||||  |||||||||||||||    
T  35920588 gcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctgacaatttatccttccattgtttaatcattt 35920512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 204
Target Start/End: Complemental strand, 1506357 - 1506286
Alignment:
Q  133 tgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaattta 204  Q
    |||||||||| | ||||||||||||||| ||||||||||||  || ||||||| | ||||||||||| ||||    
T  1506357 tgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 1506286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 226
Target Start/End: Original strand, 40148907 - 40148998
Alignment:
Q  135 atgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    ||||||||||||| |||||||||   |||||||||||||  ||  |||||||||||||||| |||| ||||||||  |  ||||||||||||    
T  40148907 atgtgtttcgtccctgcaattagagctcatttaaaaattggtccatgtaatcgttaatcctagcaaattaccctttcaaagtttaatcattt 40148998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 125 - 226
Target Start/End: Original strand, 11047437 - 11047537
Alignment:
Q  125 aggcttaatgatgtgtttcgtccttgcaattaggcgtca-tttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatca 223  Q
    ||||||||  |||| ||||  ||||||||||||| |||| ||||||||||  || | ||||||| ||||| |||||||||||||||| ||||||||||||    
T  11047437 aggcttaaatatgtatttcacccttgcaattaggagtcagtttaaaaattg-tccc-gtaatcgctaatcttggcaatttacccttgcattgtttaatca 11047534  T
Q  224 ttt 226  Q
    |||    
T  11047535 ttt 11047537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 124 - 226
Target Start/End: Complemental strand, 14194852 - 14194751
Alignment:
Q  124 taggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatca 223  Q
    |||||||||  |||| |||| |||||| ||||||| ||| ||||||||||   |  ||||||   |||||||||||||||||||||| ||||||||||||    
T  14194852 taggcttaaaaatgtctttcatccttgtaattaggggtcgtttaaaaattggcca-tgtaattactaatcctggcaatttacccttgcattgtttaatca 14194754  T
Q  224 ttt 226  Q
    |||    
T  14194753 ttt 14194751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 180 - 226
Target Start/End: Complemental strand, 29646736 - 29646690
Alignment:
Q  180 tgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||||||| |||||||| ||||||||||||| |||||||||||||||    
T  29646736 tgtaatcgctaatcctgacaatttacccttgcattgtttaatcattt 29646690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 226
Target Start/End: Original strand, 6150453 - 6150554
Alignment:
Q  125 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcat 224  Q
    ||||||||  |||| |||| |||||||||||||| ||| ||||||||||  |   |||||||  |||||||| |||||||  |||| |||||||||||||    
T  6150453 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggttcatgtaatcactaatcctgacaatttagtcttgcattgtttaatcat 6150552  T
Q  225 tt 226  Q
    ||    
T  6150553 tt 6150554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 204
Target Start/End: Complemental strand, 297404 - 297333
Alignment:
Q  133 tgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaattta 204  Q
    |||||||||| | ||||| ||||||||| ||||||||||||  || ||||||| | ||||||||||| ||||    
T  297404 tgatgtgtttagcccttgtaattaggcgacatttaaaaattcgtccctgtaattgctaatcctggcatttta 297333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 193
Target Start/End: Complemental strand, 6150851 - 6150781
Alignment:
Q  123 ttaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatc 193  Q
    ||||||||||  |||| |||| |||||||||||||| ||| ||||||||||| ||  |||| |||||||||    
T  6150851 ttaggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattagtccatgtattcgttaatc 6150781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 200
Target Start/End: Original strand, 14194420 - 14194497
Alignment:
Q  123 ttaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaa 200  Q
    ||||||||||  |||| |||| |||||||||||||| ||| ||||||||||  || ||||| ||| ||||||| ||||    
T  14194420 ttaggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaa 14194497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 135 - 200
Target Start/End: Complemental strand, 42067943 - 42067878
Alignment:
Q  135 atgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaa 200  Q
    ||||||||| ||| |||||||||| ||||||||||| ||  || ||||||| | ||||||||||||    
T  42067943 atgtgtttcatccctgcaattaggggtcatttaaaatttggtccctgtaattgataatcctggcaa 42067878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 173
Target Start/End: Complemental strand, 39453728 - 39453680
Alignment:
Q  125 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaatt 173  Q
    ||||||||  |||| |||| |||||||||||||| ||||||||||||||    
T  39453728 aggcttaaatatgtatttcatccttgcaattaggggtcatttaaaaatt 39453680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 200
Target Start/End: Original strand, 42063288 - 42063328
Alignment:
Q  160 gtcatttaaaaattactctctgtaatcgttaatcctggcaa 200  Q
    ||||||||||||||  |||||||||||| ||||||||||||    
T  42063288 gtcatttaaaaattggtctctgtaatcgctaatcctggcaa 42063328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 87; Significance: 8e-42; HSPs: 103)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 128 - 226
Target Start/End: Original strand, 45463075 - 45463173
Alignment:
Q  128 cttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  45463075 cttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctctgtaatcgctaatcctggcaatttacccttgcattgtttaatcattt 45463173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 124 - 226
Target Start/End: Complemental strand, 50504253 - 50504151
Alignment:
Q  124 taggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatca 223  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  50504253 taggcttaatgatgtgtttcgtccttgtaattaggcgtcatttaaaaattagtctctgtaatcgttaatccaggcaatttacccttgcattgtttaatca 50504154  T
Q  224 ttt 226  Q
    |||    
T  50504153 ttt 50504151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 129 - 226
Target Start/End: Original strand, 11523952 - 11524049
Alignment:
Q  129 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||    
T  11523952 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctctgtaatcgttaatcctggcaatatacccttgcattgtttaatcattt 11524049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 117 - 226
Target Start/End: Complemental strand, 27069345 - 27069236
Alignment:
Q  117 taaaaattaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgt 216  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| | |||||||||||||||||||||| |||||    
T  27069345 taaaaataaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaattgctaatcctggcaatttacccttgcattgt 27069246  T
Q  217 ttaatcattt 226  Q
    ||||||||||    
T  27069245 ttaatcattt 27069236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 125 - 226
Target Start/End: Complemental strand, 54858987 - 54858886
Alignment:
Q  125 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcat 224  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||| |||||||||||||    
T  54858987 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccatgtaatcgttaatcctggcaatttacccttgcattgtttaatcat 54858888  T
Q  225 tt 226  Q
    ||    
T  54858887 tt 54858886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 125 - 226
Target Start/End: Original strand, 3032581 - 3032682
Alignment:
Q  125 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcat 224  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||| |||||||||||||||||||||| |||||||||||||    
T  3032581 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccttgtaatcgctaatcctggcaatttacccttgcattgtttaatcat 3032680  T
Q  225 tt 226  Q
    ||    
T  3032681 tt 3032682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 125 - 226
Target Start/End: Original strand, 54858559 - 54858660
Alignment:
Q  125 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcat 224  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| |||||||| ||||||||||||| |||||||||||||    
T  54858559 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctgacaatttacccttgcattgtttaatcat 54858658  T
Q  225 tt 226  Q
    ||    
T  54858659 tt 54858660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 126 - 226
Target Start/End: Original strand, 10407889 - 10407989
Alignment:
Q  126 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcatt 225  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| |||||||| ||||||||||||| ||||||||||||||    
T  10407889 ggcttaatgatgtgtttcgtccttgcaattaggagtcatttaaaaattactccctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatt 10407988  T
Q  226 t 226  Q
    |    
T  10407989 t 10407989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 126 - 226
Target Start/End: Complemental strand, 10408315 - 10408215
Alignment:
Q  126 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcatt 225  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| || ||||||||| |||||||||||||||||||||| ||||||||||||||    
T  10408315 ggcttaatgttgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatt 10408216  T
Q  226 t 226  Q
    |    
T  10408215 t 10408215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 122 - 226
Target Start/End: Complemental strand, 51859836 - 51859732
Alignment:
Q  122 attaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaat 221  Q
    |||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||| |||||||| |||||||||||||||| ||||||||||||||||    
T  51859836 attaggcttaatgatgtgtttcgtccttgcaattagacgtaatttaaaaattagtctttgtaatcgctaatcctggcaatttatccttgtattgtttaat 51859737  T
Q  222 cattt 226  Q
    |||||    
T  51859736 cattt 51859732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 123 - 226
Target Start/End: Original strand, 27068907 - 27069010
Alignment:
Q  123 ttaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatc 222  Q
    |||||||||| |||||||||||||||||||||||||| |||||||||||||| || ||||||||| |||||||||||||||||||||| |||||||||||    
T  27068907 ttaggcttaaggatgtgtttcgtccttgcaattaggcatcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatc 27069006  T
Q  223 attt 226  Q
    ||||    
T  27069007 attt 27069010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 117 - 226
Target Start/End: Complemental strand, 27149430 - 27149322
Alignment:
Q  117 taaaaattaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgt 216  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| || ||||||| | |||||||||||||||||||||| |||||    
T  27149430 taaaaataaggcttaatgatgtgtttcgtccttgcaattaggcgtcattt-aaaattagtccctgtaattgctaatcctggcaatttacccttgcattgt 27149332  T
Q  217 ttaatcattt 226  Q
    ||||||||||    
T  27149331 ttaatcattt 27149322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 124 - 226
Target Start/End: Complemental strand, 39701337 - 39701235
Alignment:
Q  124 taggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatca 223  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| || ||||||||| ||| ||||||||||||    
T  39701337 taggtttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctatgtaatcgttaatcttgacaatttacctttgcattgtttaatca 39701238  T
Q  224 ttt 226  Q
    |||    
T  39701237 ttt 39701235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 129 - 226
Target Start/End: Complemental strand, 5818198 - 5818101
Alignment:
Q  129 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||| || |||||||||||||||||| ||||||||||||| |||||||||||||||    
T  5818198 ttaatgatgtgtttcgtctttgtaattaggcgtcatttaaaaattagtccctgtaatcgttaatcctgtcaatttacccttgcattgtttaatcattt 5818101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 123 - 226
Target Start/End: Original strand, 52573225 - 52573328
Alignment:
Q  123 ttaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatc 222  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| |  ||||||||| ||||||||||||||||| |||  |||||||||||    
T  52573225 ttaggcttaatgatgtgtttcgtctttgcaattaggcgtcatttaaaaattagtacctgtaatcgctaatcctggcaatttactcttacattgtttaatc 52573324  T
Q  223 attt 226  Q
    ||||    
T  52573325 attt 52573328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 124 - 226
Target Start/End: Original strand, 16605600 - 16605702
Alignment:
Q  124 taggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatca 223  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||| || |||||||||| || |||| ||||||||||||| |||| |||||||    
T  16605600 taggcttaatgatgtgtttcgtccttgcaattaggtgtcatttaaaaattagtccctgtaatcgtcaaacctgccaatttacccttgcattgattaatca 16605699  T
Q  224 ttt 226  Q
    |||    
T  16605700 ttt 16605702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 137 - 226
Target Start/End: Complemental strand, 22718354 - 22718265
Alignment:
Q  137 gtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||||||||||||  |||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| |||||||||||||||    
T  22718354 gtgtttcgtccttttaattaggcgtcatttaaaaattactctctgtaattgttaatcctggcaatttactcttgcattgtttaatcattt 22718265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 137 - 226
Target Start/End: Original strand, 22986862 - 22986951
Alignment:
Q  137 gtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||||||||||||  |||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| |||||||||||||||    
T  22986862 gtgtttcgtccttttaattaggcgtcatttaaaaattactctctgtaattgttaatcctggcaatttactcttgcattgtttaatcattt 22986951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 129 - 226
Target Start/End: Complemental strand, 45463496 - 45463399
Alignment:
Q  129 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| || ||||||| | ||||||||||||| |||||||| |||||||||||||||    
T  45463496 ttaatgatatgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaattgctaatcctggcaatctacccttgcattgtttaatcattt 45463399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 125 - 226
Target Start/End: Complemental strand, 52573655 - 52573554
Alignment:
Q  125 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcat 224  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||  ||||||| |||||||||| ||| |||||||||||||    
T  52573655 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccatgtaatcactaatcctagcaatttaccattgcattgtttaatcat 52573556  T
Q  225 tt 226  Q
    ||    
T  52573555 tt 52573554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 124 - 226
Target Start/End: Original strand, 27891582 - 27891684
Alignment:
Q  124 taggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatca 223  Q
    |||||||||||||||||||||||||||||||||| | | |||||||||||| || ||||||||| ||||  |||||||||||||||| ||||||||||||    
T  27891582 taggcttaatgatgtgtttcgtccttgcaattagacattatttaaaaattagtccctgtaatcgctaattttggcaatttacccttgcattgtttaatca 27891681  T
Q  224 ttt 226  Q
    |||    
T  27891682 ttt 27891684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 125 - 226
Target Start/End: Original strand, 50503824 - 50503925
Alignment:
Q  125 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcat 224  Q
    |||||||||||||||||||||||| |||||||||| |||||||||||| | ||  |||||||||||||| | |||||||||||||| |||||||||||||    
T  50503824 aggcttaatgatgtgtttcgtcctcgcaattaggcatcatttaaaaatcagtccatgtaatcgttaatcttagcaatttacccttgcattgtttaatcat 50503923  T
Q  225 tt 226  Q
    ||    
T  50503924 tt 50503925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 137 - 226
Target Start/End: Original strand, 22923149 - 22923238
Alignment:
Q  137 gtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||||||||||||  |||||| |||||||||||||||| ||||||||||||||||||||| |||||||| |||| |||||||||||||||    
T  22923149 gtgtttcgtccttttaattagacgtcatttaaaaattagtctctgtaatcgttaatcctgacaatttactcttgcattgtttaatcattt 22923238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 137 - 226
Target Start/End: Original strand, 22927802 - 22927891
Alignment:
Q  137 gtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||||||||||||  |||||| |||||||||||||||| ||||||||||||||||||||| |||||||| |||| |||||||||||||||    
T  22927802 gtgtttcgtccttttaattagacgtcatttaaaaattagtctctgtaatcgttaatcctgacaatttactcttgcattgtttaatcattt 22927891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 137 - 226
Target Start/End: Original strand, 22984081 - 22984170
Alignment:
Q  137 gtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||||||||||||  |||||| |||||||||||||||| ||||||||||||||||||||| |||||||| |||| |||||||||||||||    
T  22984081 gtgtttcgtccttttaattagacgtcatttaaaaattagtctctgtaatcgttaatcctgacaatttactcttgcattgtttaatcattt 22984170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 125 - 226
Target Start/End: Complemental strand, 22987278 - 22987177
Alignment:
Q  125 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcat 224  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||||| ||  |||||||| |||||||| |||| ||||||||  ||||||||||||    
T  22987278 aggcttaatgatgtgtttcgtccttacaattagacgtcatttaaaaattagtccatgtaatcgctaatcctgacaatatacccttgctttgtttaatcat 22987179  T
Q  225 tt 226  Q
    ||    
T  22987178 tt 22987177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 137 - 226
Target Start/End: Original strand, 22997669 - 22997758
Alignment:
Q  137 gtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||||||||||||  |||||| |||||||||||||||| ||||||||||||||||||||| |||||||| |||| |||||||||||||||    
T  22997669 gtgtttcgtccttttaattagacgtcatttaaaaattagtctctgtaatcgttaatcctgacaatttactcttgcattgtttaatcattt 22997758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 129 - 226
Target Start/End: Complemental strand, 39667199 - 39667102
Alignment:
Q  129 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||||||||||||||||||||| ||||| | ||||||||||||||  || ||||||||||||||||||| || ||||||||| |||||||||||||||    
T  39667199 ttaatgatgtgtttcgtccttgtaattacgggtcatttaaaaattggtccctgtaatcgttaatcctggtaaattacccttgcattgtttaatcattt 39667102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 125 - 226
Target Start/End: Original strand, 14801735 - 14801836
Alignment:
Q  125 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcat 224  Q
    ||||||||  |||| |||| |||||||||||||| ||| ||||||||||  ||| |||||||| |||||||| |||||||||||||||||||||||||||    
T  14801735 aggcttaaatatgtatttcatccttgcaattaggagtcgtttaaaaattggtctttgtaatcgctaatcctgacaatttacccttgtattgtttaatcat 14801834  T
Q  225 tt 226  Q
    ||    
T  14801835 tt 14801836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 129 - 226
Target Start/End: Original strand, 22717942 - 22718039
Alignment:
Q  129 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    ||||||||||||||||||||| ||||||| |||||||||||||||| ||  |||||||| |||||||| |||| ||||||||  ||||||||||||||    
T  22717942 ttaatgatgtgtttcgtccttacaattagacgtcatttaaaaattagtccatgtaatcgctaatcctgacaatatacccttgctttgtttaatcattt 22718039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 118 - 226
Target Start/End: Original strand, 7451826 - 7451934
Alignment:
Q  118 aaaaattaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtt 217  Q
    |||| ||||||||||  |||| |||  |||||||||||||| ||| ||||||||||  || ||||||||||||||||||||||||||||| || ||||||    
T  7451826 aaaatttaggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatcctggcaatttacccctgcattgtt 7451925  T
Q  218 taatcattt 226  Q
    |||||||||    
T  7451926 taatcattt 7451934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 146 - 226
Target Start/End: Original strand, 37248256 - 37248336
Alignment:
Q  146 ccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    ||||||||||||| ||| ||||||||||  || ||||||||| |||||||||||||||||||||| |||||||||||||||    
T  37248256 ccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcattt 37248336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 123 - 226
Target Start/End: Original strand, 13058034 - 13058137
Alignment:
Q  123 ttaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatc 222  Q
    ||||||||||  |||| |||  |||||||||||||| ||| ||||||||||  |||||||||||| ||||||||| ||||||||| || |||||||||||    
T  13058034 ttaggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcctggtaatttacccctgcattgtttaatc 13058133  T
Q  223 attt 226  Q
    ||||    
T  13058134 attt 13058137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 123 - 226
Target Start/End: Complemental strand, 50751928 - 50751826
Alignment:
Q  123 ttaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatc 222  Q
    |||||||||||||||||||||  || |||||||||||||| ||||||||||  || ||||||||| |||||||| ||| ||| ||||| |||||||||||    
T  50751928 ttaggcttaatgatgtgtttcacccctgcaattaggcgtcgtttaaaaattcgtc-ctgtaatcgctaatcctgacaaattaaccttgcattgtttaatc 50751830  T
Q  223 attt 226  Q
    ||||    
T  50751829 attt 50751826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 125 - 226
Target Start/End: Complemental strand, 11448158 - 11448057
Alignment:
Q  125 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcat 224  Q
    ||||||||  |||| |||||||| || ||||||| ||| ||||||||||  |||||||||||| ||||||| |||| ||||||||| |||||||||||||    
T  11448158 aggcttaaatatgtatttcgtccctgtaattaggggtcgtttaaaaattgatctctgtaatcgctaatccttgcaaattacccttgcattgtttaatcat 11448059  T
Q  225 tt 226  Q
    ||    
T  11448058 tt 11448057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 145 - 226
Target Start/End: Original strand, 24711130 - 24711211
Alignment:
Q  145 tccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||||||||||||| ||| ||||||||||  || ||||||||| |||||||||||||||||| ||| |||||||||||||||    
T  24711130 tccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttaccgttgcattgtttaatcattt 24711211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 145 - 226
Target Start/End: Complemental strand, 49879585 - 49879504
Alignment:
Q  145 tccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||||||||||||| ||| |||||||| |  |||||||||||| |||||||| ||||||||||||| |||||||||||||||    
T  49879585 tccttgcaattaggggtcgtttaaaaactgatctctgtaatcgctaatcctgacaatttacccttgcattgtttaatcattt 49879504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 129 - 226
Target Start/End: Original strand, 50750890 - 50750987
Alignment:
Q  129 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||| ||||||||||  || |||||||||||||| ||||||||||  || ||||||||| |||||||||||| ||| ||||| |||||||||||||||    
T  50750890 ttaaggatgtgtttcacccctgcaattaggcgtcgtttaaaaattcgtccctgtaatcgctaatcctggcaaattaaccttgcattgtttaatcattt 50750987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 126 - 210
Target Start/End: Original strand, 9400519 - 9400603
Alignment:
Q  126 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttg 210  Q
    |||||||||||||| || ||||||||||||||| ||||||||||||||  || ||||||| | |||||||||||||||| |||||    
T  9400519 ggcttaatgatgtgattagtccttgcaattaggtgtcatttaaaaattcgtccctgtaattgctaatcctggcaatttagccttg 9400603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 123 - 210
Target Start/End: Original strand, 42738028 - 42738115
Alignment:
Q  123 ttaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttg 210  Q
    ||||||||| |||||||||| | ||||||||||||||| ||||||||||||  || ||||||| ||||||||||||| |||| |||||    
T  42738028 ttaggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgttaatcctggcattttaaccttg 42738115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 123 - 226
Target Start/End: Complemental strand, 50419068 - 50418965
Alignment:
Q  123 ttaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatc 222  Q
    ||||||||||  |||| |||  |||||||||||||| ||| ||||||||||  || || |||||| ||||||||||||| |||||||| |||||||||||    
T  50419068 ttaggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctctaatcgctaatcctggcaatctacccttgcattgtttaatc 50418969  T
Q  223 attt 226  Q
    ||||    
T  50418968 attt 50418965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 124 - 223
Target Start/End: Original strand, 51692551 - 51692650
Alignment:
Q  124 taggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatca 223  Q
    |||||||||  |||| |||| |||||||||||||  ||| ||||||||||  ||| |||||||| |||||||| ||||||||||||| ||||||||||||    
T  51692551 taggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattgatctatgtaatcgctaatcctgacaatttacccttgcattgtttaatca 51692650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 124 - 226
Target Start/End: Complemental strand, 44967468 - 44967366
Alignment:
Q  124 taggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatca 223  Q
    |||||||||  |||| |||  |||||||||||||  ||| ||||||||||  || ||||||||| ||||||||||||||||||| || ||||||||||||    
T  44967468 taggcttaaatatgtatttgatccttgcaattagaggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccctgcattgtttaatca 44967369  T
Q  224 ttt 226  Q
    |||    
T  44967368 ttt 44967366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 53701826 - 53701912
Alignment:
Q  140 tttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||| |||||||||||||| ||| ||||||||||  |||||||||||  |||||||| ||||||| ||||| |||||||||||||||    
T  53701826 tttcatccttgcaattaggggtcgtttaaaaattgatctctgtaatctctaatcctgacaatttatccttgcattgtttaatcattt 53701912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 145 - 226
Target Start/End: Original strand, 18831368 - 18831449
Alignment:
Q  145 tccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    ||||| |||||||| ||| ||||||||||  || ||||||||| ||||||||| |||||||||||| |||||||||||||||    
T  18831368 tccttacaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggtaatttacccttgcattgtttaatcattt 18831449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 125 - 202
Target Start/End: Complemental strand, 22567184 - 22567107
Alignment:
Q  125 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatt 202  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||  || ||||||| | ||||||| ||||||    
T  22567184 aggcttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaatccttgcaatt 22567107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 125 - 210
Target Start/End: Original strand, 27934531 - 27934616
Alignment:
Q  125 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttg 210  Q
    ||||||||||||||| || ||||||||||||||| ||| ||||||||||  || ||||||| | |||||||||||||||| |||||    
T  27934531 aggcttaatgatgtgattagtccttgcaattaggggtcgtttaaaaatttgtccctgtaattgctaatcctggcaatttagccttg 27934616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 123 - 204
Target Start/End: Complemental strand, 34837474 - 34837393
Alignment:
Q  123 ttaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaattta 204  Q
    ||||||||| |||||||||| | ||||||||||||||| ||||||||||||  |||||||||| | ||||||||||| ||||    
T  34837474 ttaggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtctctgtaattgctaatcctggcatttta 34837393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 122 - 210
Target Start/End: Original strand, 6236827 - 6236914
Alignment:
Q  122 attaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttg 210  Q
    |||||| ||| |||||| ||| |||||||||||||| |||||||||||| ||| ||| ||||||||||||||| || ||||||||||||    
T  6236827 attaggtttattgatgtctttagtccttgcaattagacgtcatttaaaatttagtct-tgtaatcgttaatcccgggaatttacccttg 6236914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 135 - 226
Target Start/End: Complemental strand, 32063755 - 32063664
Alignment:
Q  135 atgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||| ||| |||| |||||||||| ||||||||||||||  | ||||||||||||||| ||||||| ||||||||| |  ||||||||||||    
T  32063755 atgtattttgtccctgcaattaggggtcatttaaaaattggtttctgtaatcgttaatactggcaaattacccttgcaaagtttaatcattt 32063664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 123 - 226
Target Start/End: Complemental strand, 35508671 - 35508568
Alignment:
Q  123 ttaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatc 222  Q
    ||||||||||  |||| |||  || ||||||||||| ||| ||||||||||| ||  ||||||||||||| ||  ||||||||||||| |||||||||||    
T  35508671 ttaggcttaaatatgtattttatcattgcaattaggggtcgtttaaaaattaatccttgtaatcgttaattctaacaatttacccttgcattgtttaatc 35508572  T
Q  223 attt 226  Q
    ||||    
T  35508571 attt 35508568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 135 - 226
Target Start/End: Original strand, 52909262 - 52909353
Alignment:
Q  135 atgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||| |||| || ||||||||||| ||| || |||||||  || ||||||||| |||||||| ||||||||||||| |||||||||||||||    
T  52909262 atgtatttcatctttgcaattaggggtcgttcaaaaattggtcactgtaatcgctaatcctgacaatttacccttgcattgtttaatcattt 52909353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 135 - 226
Target Start/End: Complemental strand, 54087114 - 54087023
Alignment:
Q  135 atgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||| |||| || ||| ||||||| ||| ||||||||||  || ||||||||||||||| || ||||||||||||| |||||||||||||||    
T  54087114 atgtatttcatcattgtaattaggggtcgtttaaaaattggtccctgtaatcgttaatcatgacaatttacccttgcattgtttaatcattt 54087023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 128 - 210
Target Start/End: Complemental strand, 9400914 - 9400832
Alignment:
Q  128 cttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttg 210  Q
    |||||||||||| || ||||||||||||||| ||| ||||||||||  || ||||||| | |||||||||||||||| |||||    
T  9400914 cttaatgatgtgattagtccttgcaattaggggtcgtttaaaaattcgtccctgtaattgctaatcctggcaatttagccttg 9400832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 152 - 226
Target Start/End: Original strand, 16005864 - 16005938
Alignment:
Q  152 aattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    ||||||| ||| ||||||||||| || ||||||||| |||| ||||||||||| || ||||||||||||||||||    
T  16005864 aattaggggtcgtttaaaaattaatccctgtaatcgctaattctggcaatttatccatgtattgtttaatcattt 16005938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 120 - 226
Target Start/End: Original strand, 23613303 - 23613409
Alignment:
Q  120 aaattaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgttta 219  Q
    |||| ||||||||  |||| |||  |||||||||||||| ||| ||||||||||  ||  |||||||| ||||| ||||||||||||| || ||||||||    
T  23613303 aaataaggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccatgtaatcgctaatcttggcaatttacccctgcattgttta 23613402  T
Q  220 atcattt 226  Q
    |||||||    
T  23613403 atcattt 23613409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 124 - 226
Target Start/End: Complemental strand, 34765810 - 34765708
Alignment:
Q  124 taggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatca 223  Q
    |||||||||  |||| |||  |||||||||||||| ||| ||||||||||  |   |||||||| |||||||||||||||||| ||| ||||||||||||    
T  34765810 taggcttaaatatgtattttatccttgcaattaggggtcgtttaaaaattggttcatgtaatcgctaatcctggcaatttacctttgcattgtttaatca 34765711  T
Q  224 ttt 226  Q
    |||    
T  34765710 ttt 34765708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 117 - 226
Target Start/End: Complemental strand, 36009251 - 36009141
Alignment:
Q  117 taaaaattaggcttaatgatgtgtttcgtccttgcaattaggcg-tcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattg 215  Q
    |||| |||||||||||  |||| |||  |||||| ||||||| | || ||||||||||  || ||||||||||||||||||| ||||||||| || ||||    
T  36009251 taaatattaggcttaaatatgtatttgatccttgtaattagggggtcgtttaaaaattggtccctgtaatcgttaatcctggaaatttacccctgcattg 36009152  T
Q  216 tttaatcattt 226  Q
    |||||||||||    
T  36009151 tttaatcattt 36009141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 124 - 226
Target Start/End: Original strand, 39700907 - 39701009
Alignment:
Q  124 taggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatca 223  Q
    |||| |||||| |||||||| | ||||||||||||||| |||||||||||| ||  |||||||| |||||||| |||| |||||||  ||| |||||| |    
T  39700907 taggattaatggtgtgtttcattcttgcaattaggcgttatttaaaaattaatccatgtaatcgctaatcctgacaatatacccttacattatttaatta 39701006  T
Q  224 ttt 226  Q
    |||    
T  39701007 ttt 39701009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 145 - 226
Target Start/End: Original strand, 5368966 - 5369047
Alignment:
Q  145 tccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    ||||||||||||||  || ||||||||||  ||  |||||||| ||||||||||||||||||| || |||||||||||||||    
T  5368966 tccttgcaattagggatcgtttaaaaattggtccttgtaatcgctaatcctggcaatttacccctgcattgtttaatcattt 5369047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 210
Target Start/End: Complemental strand, 4983123 - 4983039
Alignment:
Q  126 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttg 210  Q
    |||||||||||||| || ||||||||||||||||||| ||||||||||  ||  |||||| | ||||||| |||||||| |||||    
T  4983123 ggcttaatgatgtgattagtccttgcaattaggcgtcgtttaaaaattcatccttgtaattgctaatcctcgcaatttagccttg 4983039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 124 - 204
Target Start/End: Original strand, 51203607 - 51203687
Alignment:
Q  124 taggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaattta 204  Q
    |||||||| |||||||||| | ||||||||||||||| ||||||||||||  || ||||||| | ||||||||||| ||||    
T  51203607 taggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 51203687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 135 - 226
Target Start/End: Original strand, 24411367 - 24411458
Alignment:
Q  135 atgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||| |||| |||| ||||||||| ||  ||||||||||  || ||||||||| ||| |||| ||||||||||||| |||||||||||||||    
T  24411367 atgtatttcatcctagcaattaggggtagtttaaaaattggtccctgtaatcgctaaccctgacaatttacccttgcattgtttaatcattt 24411458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 135 - 206
Target Start/End: Complemental strand, 29321324 - 29321253
Alignment:
Q  135 atgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacc 206  Q
    |||||||||||||||||||||| | ||||||||||||||  | ||| ||||||||||| ||||||| |||||    
T  29321324 atgtgtttcgtccttgcaattaagggtcatttaaaaattggtttctataatcgttaattctggcaaattacc 29321253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 125 - 204
Target Start/End: Original strand, 34837073 - 34837152
Alignment:
Q  125 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaattta 204  Q
    ||||||| |||||||||| | ||||||||||||||| ||||||||||||  || ||||||| | ||||||||||| ||||    
T  34837073 aggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 34837152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 128 - 199
Target Start/End: Original strand, 39666772 - 39666843
Alignment:
Q  128 cttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggca 199  Q
    ||||||||||||||||||| ||| ||||||  ||||||||||||||| ||  |||||||| |||||||||||    
T  39666772 cttaatgatgtgtttcgtctttgtaattagaagtcatttaaaaattagtcaatgtaatcgctaatcctggca 39666843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 125 - 204
Target Start/End: Complemental strand, 42738429 - 42738350
Alignment:
Q  125 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaattta 204  Q
    ||||||| |||||||||| | ||||||||||||||| ||||||||||||  || ||||||| | ||||||||||| ||||    
T  42738429 aggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 42738350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 126 - 204
Target Start/End: Complemental strand, 38012567 - 38012489
Alignment:
Q  126 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaattta 204  Q
    |||||| |||||||||| | ||||||||||||||| ||||||||||||  || ||||||| | ||||||||||| ||||    
T  38012567 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 38012489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 152 - 226
Target Start/End: Complemental strand, 43155898 - 43155824
Alignment:
Q  152 aattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    ||||||| ||| ||||||||||  || |||||||||||||||||||||||||| || || ||| |||||||||||    
T  43155898 aattaggggtcgtttaaaaattggtccctgtaatcgttaatcctggcaatttatccctgcattatttaatcattt 43155824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 124 - 226
Target Start/End: Complemental strand, 55867544 - 55867442
Alignment:
Q  124 taggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatca 223  Q
    |||||||||  |||| |||  ||| |||||||||| ||| ||||||||||  ||  |||||||||||||||| ||||  |||||||| ||||||||||||    
T  55867544 taggcttaaatatgtatttgatccctgcaattaggggtcgtttaaaaattggtccatgtaatcgttaatccttgcaaactacccttgcattgtttaatca 55867445  T
Q  224 ttt 226  Q
    |||    
T  55867444 ttt 55867442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 123 - 204
Target Start/End: Complemental strand, 32950542 - 32950461
Alignment:
Q  123 ttaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaattta 204  Q
    ||||||||| |||||||||| | ||||||||||||| | ||||||||||||  || ||||||| | ||||||||||| ||||    
T  32950542 ttaggcttattgatgtgtttagcccttgcaattaggtggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 32950461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 210
Target Start/End: Original strand, 33247293 - 33247358
Alignment:
Q  145 tccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttg 210  Q
    |||||||||||||| ||||||||||||||  || ||||||| | |||||||||||||||| |||||    
T  33247293 tccttgcaattaggtgtcatttaaaaattcgtccctgtaattgctaatcctggcaatttagccttg 33247358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 210
Target Start/End: Original strand, 4982726 - 4982810
Alignment:
Q  126 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttg 210  Q
    |||||||||||||| || |||||||||||||| ||| |||||||||||  ||  |||||| | ||||| |||||||||| |||||    
T  4982726 ggcttaatgatgtgattagtccttgcaattagacgtaatttaaaaattcgtccatgtaattgctaatcttggcaatttagccttg 4982810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 133 - 209
Target Start/End: Complemental strand, 6237241 - 6237165
Alignment:
Q  133 tgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttaccctt 209  Q
    |||||| ||| || ||| |||||||||||||||||||| ||| |||||||||| | ||||||||  |||||||||||    
T  6237241 tgatgtctttagttcttacaattaggcgtcatttaaaatttagtctctgtaattgctaatcctgagaatttaccctt 6237165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 134 - 202
Target Start/End: Complemental strand, 27934907 - 27934839
Alignment:
Q  134 gatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatt 202  Q
    |||||| || ||||||||||||||||||||||||||||||  || ||||||| | ||||||| ||||||    
T  27934907 gatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaatccttgcaatt 27934839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 135 - 206
Target Start/End: Original strand, 30641529 - 30641598
Alignment:
Q  135 atgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacc 206  Q
    ||||||||||||| | |||||||| ||||||||||||||  | |||||||||||||||||| |||| |||||    
T  30641529 atgtgtttcgtccctccaattaggggtcatttaaaaatt--tgtctgtaatcgttaatccttgcaaattacc 30641598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 204
Target Start/End: Original strand, 9144773 - 9144844
Alignment:
Q  133 tgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaattta 204  Q
    |||||||||| | ||||||||||||||| ||||||||||||  || ||||||| | ||||||||||| ||||    
T  9144773 tgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 9144844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 125 - 204
Target Start/End: Complemental strand, 9145164 - 9145085
Alignment:
Q  125 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaattta 204  Q
    ||||||| |||||||||| | ||||||||||||||| |||||||||||   || ||||||| | ||||||||||| ||||    
T  9145164 aggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaatgcgtccctgtaattgctaatcctggcatttta 9145085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 179 - 226
Target Start/End: Complemental strand, 9731585 - 9731538
Alignment:
Q  179 ctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    ||||||||| |||||||| ||||||| |||||||||||||||||||||    
T  9731585 ctgtaatcgctaatcctgacaatttatccttgtattgtttaatcattt 9731538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 210
Target Start/End: Original strand, 11446279 - 11446354
Alignment:
Q  135 atgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttg 210  Q
    ||||||||||||| |||||||||  ||||||||||||||  |   || |||||||||||||||||| |||||||||    
T  11446279 atgtgtttcgtccctgcaattagaggtcatttaaaaattggttcatggaatcgttaatcctggcaaattacccttg 11446354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 226
Target Start/End: Complemental strand, 15508091 - 15508001
Alignment:
Q  135 atgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||| |||| |||||||||||||| ||| ||||||||||   || |||||||| |||||||| ||||||||| ||| || ||||||||||||    
T  15508091 atgtatttcatccttgcaattaggggtcgtttaaaaattgtcct-tgtaatcgctaatcctgacaatttaccattgcatggtttaatcattt 15508001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 226
Target Start/End: Complemental strand, 30642565 - 30642474
Alignment:
Q  135 atgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    ||||||||||||| |||||||| | ||||||||||||||  ||  |||||||||||||||| |||| |||  |||| |  ||||||||||||    
T  30642565 atgtgtttcgtccctgcaattatgggtcatttaaaaattcatcattgtaatcgttaatcctagcaaattagtcttgcaaagtttaatcattt 30642474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 125 - 204
Target Start/End: Original strand, 32950141 - 32950220
Alignment:
Q  125 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaattta 204  Q
    ||||||| |||||||||| | ||||||||||||||| ||||||||||||  || | ||||| | ||||||||||| ||||    
T  32950141 aggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtcccagtaattgctaatcctggcatttta 32950220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 226
Target Start/End: Complemental strand, 37976584 - 37976481
Alignment:
Q  123 ttaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatc 222  Q
    ||||||||||  |||| |||| || | ||||||||| ||| ||||||||||  || ||||||||| |||| ||| ||||||| | ||| |||||||||||    
T  37976584 ttaggcttaaatatgtatttcatcatggcaattaggggtcgtttaaaaattgatccctgtaatcgctaattctgacaatttatcattgcattgtttaatc 37976485  T
Q  223 attt 226  Q
    ||||    
T  37976484 attt 37976481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 226
Target Start/End: Complemental strand, 39539349 - 39539246
Alignment:
Q  123 ttaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatc 222  Q
    ||||||||||  |||| |||| |||||||||||| | ||| ||||||||||  ||  ||||||||||||| || |||| ||| ||||| ||| |||||||    
T  39539349 ttaggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtcaatgtaatcgttaattcttgcaaattagccttgcattctttaatc 39539250  T
Q  223 attt 226  Q
    ||||    
T  39539249 attt 39539246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 126 - 204
Target Start/End: Original strand, 38012170 - 38012248
Alignment:
Q  126 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaattta 204  Q
    |||||| |||||||||  | ||||||||||||||| ||||||||||||  || ||||||| | ||||||||||| ||||    
T  38012170 ggcttattgatgtgttcagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 38012248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 135 - 209
Target Start/End: Complemental strand, 40317082 - 40317008
Alignment:
Q  135 atgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttaccctt 209  Q
    ||||||||||||| |||| |||||  | |||||||||||   ||||||||||||||||||||| || ||||||||    
T  40317082 atgtgtttcgtccctgcagttagggcttatttaaaaattggcctctgtaatcgttaatcctggaaaattaccctt 40317008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 135 - 209
Target Start/End: Complemental strand, 40327156 - 40327082
Alignment:
Q  135 atgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttaccctt 209  Q
    ||||||||||||| |||| |||||  | |||||||||||   ||||||||||||||||||||| || ||||||||    
T  40327156 atgtgtttcgtccctgcagttagggcttatttaaaaattggcctctgtaatcgttaatcctggaaaattaccctt 40327082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 210
Target Start/End: Complemental strand, 33247667 - 33247586
Alignment:
Q  129 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttg 210  Q
    ||||||||||| || |||||||||||||||  || |||||||||   || ||||||| | |||||||||||||||| |||||    
T  33247667 ttaatgatgtgattagtccttgcaattagggatcgtttaaaaatccgtccctgtaattgctaatcctggcaatttagccttg 33247586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 226
Target Start/End: Complemental strand, 35028427 - 35028326
Alignment:
Q  125 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcat 224  Q
    ||||||||  |||| |||| |||||||||||||| ||  ||||||||||  ||  | |  ||| ||||||| |||||||||||||| |||||||||||||    
T  35028427 aggcttaaatatgtatttcatccttgcaattaggggtattttaaaaattggtccatatgttcgctaatccttgcaatttacccttgcattgtttaatcat 35028328  T
Q  225 tt 226  Q
    ||    
T  35028327 tt 35028326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 135 - 200
Target Start/End: Original strand, 41582456 - 41582521
Alignment:
Q  135 atgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaa 200  Q
    ||||||||| ||| |||||| ||| ||||||||||||||  || || |||||||||||||||||||    
T  41582456 atgtgtttcatccctgcaatcaggggtcatttaaaaattggtccctctaatcgttaatcctggcaa 41582521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 135 - 200
Target Start/End: Complemental strand, 41583650 - 41583585
Alignment:
Q  135 atgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaa 200  Q
    ||||||||| ||| |||||||||| ||||||||||||||  | |||||| ||| ||||||||||||    
T  41583650 atgtgtttcatccctgcaattaggggtcatttaaaaattgatttctgtattcgctaatcctggcaa 41583585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 200
Target Start/End: Original strand, 50418666 - 50418742
Alignment:
Q  124 taggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaa 200  Q
    |||||||||  |||| |||  |||||||||||||| ||| ||||||||||  || ||||||||||||||||| ||||    
T  50418666 taggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatccttgcaa 50418742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 154
Target Start/End: Original strand, 51859441 - 51859473
Alignment:
Q  122 attaggcttaatgatgtgtttcgtccttgcaat 154  Q
    |||||||||||||||||||||||||||||||||    
T  51859441 attaggcttaatgatgtgtttcgtccttgcaat 51859473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 226
Target Start/End: Original strand, 10203630 - 10203721
Alignment:
Q  135 atgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    ||||||||||||| |  ||||| | ||||||||||||||| || |||||||||||||| ||| ||| ||| |||| ||   |||||||||||    
T  10203630 atgtgtttcgtccctataattaagggtcatttaaaaattagtcactgtaatcgttaattctgacaaattatccttataaaatttaatcattt 10203721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 226
Target Start/End: Complemental strand, 17356341 - 17356250
Alignment:
Q  135 atgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||| |||| ||||| |||||| | ||| ||||||||||  || ||||| ||| ||||| ||||||||||| |||| ||||||| |||||||    
T  17356341 atgtatttcatccttccaattacgggtcgtttaaaaattggtccctgtattcgctaatcttggcaatttactcttgcattgtttgatcattt 17356250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 135 - 200
Target Start/End: Original strand, 40387476 - 40387541
Alignment:
Q  135 atgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaa 200  Q
    ||||||||| ||| |||||||||| | ||||||||||||  || ||||| ||| ||||||||||||    
T  40387476 atgtgtttcatccctgcaattaggggccatttaaaaattggtccctgtattcgctaatcctggcaa 40387541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 125 - 218
Target Start/End: Complemental strand, 53129935 - 53129842
Alignment:
Q  125 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgttt 218  Q
    ||||||||  |||| |||| |||||||||| ||| ||| ||||||||||  ||   ||||||| ||||||| |||||||||||| | |||||||    
T  53129935 aggcttaaatatgtatttcatccttgcaatcaggggtcgtttaaaaattgatcctcgtaatcgctaatccttgcaatttaccctcgcattgttt 53129842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #99
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 200
Target Start/End: Complemental strand, 54435528 - 54435451
Alignment:
Q  123 ttaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaa 200  Q
    ||||||||||  |||| |||||| |||||||||||| ||| ||||||||||  ||  ||||||||| |||||| ||||    
T  54435528 ttaggcttaaatatgtatttcgtgcttgcaattaggtgtcgtttaaaaattgatccatgtaatcgtcaatccttgcaa 54435451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #100
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 210
Target Start/End: Original strand, 8438305 - 8438364
Alignment:
Q  150 gcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttg 210  Q
    ||||||||| ||||||||||||||  ||  ||||||||||||||||||||| |||| ||||    
T  8438305 gcaattaggggtcatttaaaaattggtca-tgtaatcgttaatcctggcaaattactcttg 8438364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #101
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 200
Target Start/End: Complemental strand, 51692949 - 51692873
Alignment:
Q  124 taggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaa 200  Q
    |||||||||  |||| |||| |||||||||||||| ||| ||||||||||  || ||||| ||| ||||||| ||||    
T  51692949 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaa 51692873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #102
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 226
Target Start/End: Original strand, 51859471 - 51859507
Alignment:
Q  190 aatcctggcaatttacccttgtattgtttaatcattt 226  Q
    ||||||||||||||||||||| ||| |||||||||||    
T  51859471 aatcctggcaatttacccttgcattatttaatcattt 51859507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #103
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 195
Target Start/End: Original strand, 54086704 - 54086764
Alignment:
Q  135 atgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcct 195  Q
    |||| |||| |||||||||||||| ||| ||||||||||  |||||||| ||| |||||||    
T  54086704 atgtatttcatccttgcaattaggggtcgtttaaaaattggtctctgtattcgctaatcct 54086764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 85; Significance: 1e-40; HSPs: 52)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 126 - 226
Target Start/End: Complemental strand, 28226170 - 28226070
Alignment:
Q  126 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcatt 225  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| |||||||||||||||||||||| ||||||||||||||    
T  28226170 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatt 28226071  T
Q  226 t 226  Q
    |    
T  28226070 t 28226070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 125 - 226
Target Start/End: Original strand, 15604338 - 15604439
Alignment:
Q  125 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcat 224  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||| || ||||||||| |||||||||||||||||||||| |||||||||||||    
T  15604338 aggcttaatgatgtgtttcgtccttgcaattaggtgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcat 15604437  T
Q  225 tt 226  Q
    ||    
T  15604438 tt 15604439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 125 - 226
Target Start/End: Complemental strand, 8710895 - 8710794
Alignment:
Q  125 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcat 224  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||| |||||||| ||||||||||||| |||||||||||||    
T  8710895 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccatgtaatcgctaatcctgacaatttacccttgcattgtttaatcat 8710796  T
Q  225 tt 226  Q
    ||    
T  8710795 tt 8710794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 124 - 226
Target Start/End: Original strand, 8342185 - 8342287
Alignment:
Q  124 taggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatca 223  Q
    |||| |||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||| | |||||||||||||||| ||||| ||||||||||||    
T  8342185 taggtttaatgatgtgtttcgtccttgcaattaagcgtcatttaaaaattagtctatgtaattggtaatcctggcaatttatccttgcattgtttaatca 8342284  T
Q  224 ttt 226  Q
    |||    
T  8342285 ttt 8342287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 129 - 226
Target Start/End: Complemental strand, 8342602 - 8342505
Alignment:
Q  129 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||  |||||||| ||||||||||||| |||||||||| ||||    
T  8342602 ttaatgatgtgtttcgtccttacaattaggcgtcatttaaaaattagtctctgtaatcaataatcctgacaatttacccttgcattgtttaattattt 8342505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 129 - 226
Target Start/End: Complemental strand, 15604762 - 15604665
Alignment:
Q  129 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||||||||||||| ||||||||||||||| |||||||||||| || || ||||||||| |||||||||||||||||||||| |||||||||||||||    
T  15604762 ttaatgatgtgttttgtccttgcaattaggtgtcatttaaaaactagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcattt 15604665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 118 - 226
Target Start/End: Original strand, 6573535 - 6573643
Alignment:
Q  118 aaaaattaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtt 217  Q
    ||||| |||||||||||||||||||| ||| | |||||||||||||||||||||||  ||  |||||||| |||||||||||||||||||||| ||||||    
T  6573535 aaaaaataggcttaatgatgtgtttcatccctccaattaggcgtcatttaaaaattcgtccatgtaatcgctaatcctggcaatttacccttgaattgtt 6573634  T
Q  218 taatcattt 226  Q
    |||||||||    
T  6573635 taatcattt 6573643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 127 - 226
Target Start/End: Original strand, 11830365 - 11830464
Alignment:
Q  127 gcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| || ||||||| | |||||||  ||||||||||||| |||||||||||||||    
T  11830365 gcttaatgatgtgtttcgtccttgcaattagacgtcatttaaaaattagtccctgtaattgctaatcctaacaatttacccttgcattgtttaatcattt 11830464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 125 - 226
Target Start/End: Original strand, 41587234 - 41587334
Alignment:
Q  125 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcat 224  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||  || ||||||||||||||||||| || ||||||||| |||||||||||||    
T  41587234 aggcttaatgatgtgtttcgtccttgcaattaagagtcatttaaaaattggtc-ctgtaatcgttaatcctggaaaattacccttgcattgtttaatcat 41587332  T
Q  225 tt 226  Q
    ||    
T  41587333 tt 41587334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 127 - 226
Target Start/End: Complemental strand, 41588483 - 41588384
Alignment:
Q  127 gcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    ||||||| ||||||||||||||| |||||||||||||||||||||||| || ||||||||| |||| |||||||||||| |||  |||||||||||||||    
T  41588483 gcttaataatgtgtttcgtccttacaattaggcgtcatttaaaaattagtccctgtaatcgctaattctggcaatttacacttacattgtttaatcattt 41588384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 117 - 226
Target Start/End: Original strand, 6573038 - 6573146
Alignment:
Q  117 taaaaattaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgt 216  Q
    |||||| |||| ||||||||||||||||||| |||||||||||||||||||||||||  ||  |||||||| ||||| |||||||||| ||||| |||||    
T  6573038 taaaaaataggtttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaatttgtccatgtaatcgctaatcttggcaattta-ccttgcattgt 6573136  T
Q  217 ttaatcattt 226  Q
    ||||||||||    
T  6573137 ttaatcattt 6573146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 123 - 226
Target Start/End: Complemental strand, 44714191 - 44714089
Alignment:
Q  123 ttaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatc 222  Q
    ||||||||||  |||| |||| |||||||||||||| ||| ||||||||||| || ||||||| | |||||||||||||||||||||| |||||||||||    
T  44714191 ttaggcttaaatatgt-tttcatccttgcaattaggggtcgtttaaaaattagtccctgtaattgctaatcctggcaatttacccttgcattgtttaatc 44714093  T
Q  223 attt 226  Q
    ||||    
T  44714092 attt 44714089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 135 - 226
Target Start/End: Original strand, 15848097 - 15848188
Alignment:
Q  135 atgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||| |||| |||||||||||||| ||| ||||||||||  || ||||||||| ||||||||| |||||||||||| |||||||||||||||    
T  15848097 atgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggtaatttacccttgcattgtttaatcattt 15848188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 120 - 226
Target Start/End: Original strand, 36382155 - 36382261
Alignment:
Q  120 aaattaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgttta 219  Q
    |||||||||||||  |||| |||| ||||||||||||||  || ||||||||||  || || |||||| |||||||| ||||||||||||| ||||||||    
T  36382155 aaattaggcttaagtatgtatttcatccttgcaattagggttcgtttaaaaattggtccctataatcgctaatcctgacaatttacccttgcattgttta 36382254  T
Q  220 atcattt 226  Q
    |||||||    
T  36382255 atcattt 36382261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 125 - 213
Target Start/End: Complemental strand, 14900879 - 14900791
Alignment:
Q  125 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtat 213  Q
    ||||||||||||||| || ||||||||||||||| ||| ||||||||||  || ||||||| | |||||||||||||||| ||||||||    
T  14900879 aggcttaatgatgtgattagtccttgcaattaggggtcgtttaaaaatttgtccctgtaattgctaatcctggcaatttagccttgtat 14900791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 126 - 226
Target Start/End: Complemental strand, 22051421 - 22051321
Alignment:
Q  126 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcatt 225  Q
    |||||||  |||| |||| | |||||||||||  ||  ||||||||||| |||||||||||| ||||||| |||||||||||||| ||||||||||||||    
T  22051421 ggcttaaatatgtatttcattcttgcaattagaggttgtttaaaaattagtctctgtaatcgctaatcctagcaatttacccttgcattgtttaatcatt 22051322  T
Q  226 t 226  Q
    |    
T  22051321 t 22051321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 126 - 226
Target Start/End: Original strand, 25892394 - 25892494
Alignment:
Q  126 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcatt 225  Q
    |||||||||||||||||| ||  || |||||||| |||||||||||||  ||  |||||||| |||||||||||| ||||||||  ||||||||||||||    
T  25892394 ggcttaatgatgtgtttcatctatgaaattaggcttcatttaaaaatttgtccatgtaatcgctaatcctggcaaattacccttccattgtttaatcatt 25892493  T
Q  226 t 226  Q
    |    
T  25892494 t 25892494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 147 - 226
Target Start/End: Original strand, 16099076 - 16099155
Alignment:
Q  147 cttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||||||||||| ||||||||||||||  || ||||||||  ||||||||||||||||||| || |||||||||||||||    
T  16099076 cttgcaattaggggtcatttaaaaattggtccctgtaatcactaatcctggcaatttacccctgcattgtttaatcattt 16099155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 124 - 226
Target Start/End: Complemental strand, 11163453 - 11163351
Alignment:
Q  124 taggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatca 223  Q
    |||||||||  |||| |||  |||||||||||||| ||| ||||||||||  || ||||||||| ||||||||||||||||||  || ||||||||||||    
T  11163453 taggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacctctgcattgtttaatca 11163354  T
Q  224 ttt 226  Q
    |||    
T  11163353 ttt 11163351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 39423529 - 39423615
Alignment:
Q  140 tttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||| |||||| ||||| | ||| ||||||||||  |||||||||||| |||| ||||||||||| |||||||||||||||||||||    
T  39423529 tttcatccttgtaattacgggtcgtttaaaaattggtctctgtaatcgctaattctggcaatttatccttgtattgtttaatcattt 39423615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 145 - 226
Target Start/End: Original strand, 39498329 - 39498410
Alignment:
Q  145 tccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||||| ||||||| ||| ||||||||||  || ||||||||||||||||||||||||||||| |  |||||||||||||||    
T  39498329 tccttgtaattaggggtcgtttaaaaattggtccctgtaatcgttaatcctggcaatttacccctacattgtttaatcattt 39498410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 135 - 226
Target Start/End: Original strand, 2318168 - 2318258
Alignment:
Q  135 atgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||| |||| |||||||||||||| ||  ||||||||||  ||| |||||||| |||| ||||||||||||||||| |||||||||||||||    
T  2318168 atgtatttcatccttgcaattagg-gtagtttaaaaattggtctatgtaatcgctaattctggcaatttacccttgcattgtttaatcattt 2318258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 135 - 226
Target Start/End: Complemental strand, 6589778 - 6589687
Alignment:
Q  135 atgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    ||||||||||||| |||||||| | ||||||||||||||  ||  ||||||||||||| ||||||| ||||||||| |  ||||||||||||    
T  6589778 atgtgtttcgtccctgcaattaagggtcatttaaaaattggtccatgtaatcgttaattctggcaaattacccttgcaaagtttaatcattt 6589687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 135 - 226
Target Start/End: Original strand, 10712732 - 10712823
Alignment:
Q  135 atgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||| |||| ||||||||||||||  || ||||||||||  ||  | ||||| ||||||||||||||||||||||| |||||||||||||||    
T  10712732 atgtatttcatccttgcaattagggttcgtttaaaaattggtccttataatcattaatcctggcaatttacccttgcattgtttaatcattt 10712823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 121 - 204
Target Start/End: Original strand, 13995668 - 13995751
Alignment:
Q  121 aattaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaattta 204  Q
    ||||||||||| |||||||||| | ||||||||||||||| ||||||||||||  || ||||||| | ||||||||||| ||||    
T  13995668 aattaggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 13995751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 135 - 226
Target Start/End: Original strand, 28228679 - 28228770
Alignment:
Q  135 atgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    ||||||||||||| |||||||||| ||||||||||||||  || ||||||||||||||| |||||| |||| |||  |  ||||||||||||    
T  28228679 atgtgtttcgtccctgcaattaggggtcatttaaaaattggtccctgtaatcgttaatcgtggcaaattactctttcaaagtttaatcattt 28228770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 124 - 202
Target Start/End: Original strand, 14900494 - 14900572
Alignment:
Q  124 taggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatt 202  Q
    |||||||||||||||| || |||||||||||||||||||||| |||||||  || ||||||| | ||||||| ||||||    
T  14900494 taggcttaatgatgtgattagtccttgcaattaggcgtcattcaaaaattcgtccctgtaattgctaatccttgcaatt 14900572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 125 - 226
Target Start/End: Original strand, 34447812 - 34447913
Alignment:
Q  125 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcat 224  Q
    ||||||||  |||| |||| |||||| ||||||| ||||||||||||||  || || ||||||  ||||||| ||||||||||||| |||||||||| ||    
T  34447812 aggcttaaatatgtatttcatccttgtaattaggggtcatttaaaaattggtccctataatcgcaaatcctgacaatttacccttgcattgtttaataat 34447911  T
Q  225 tt 226  Q
    ||    
T  34447912 tt 34447913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 145 - 226
Target Start/End: Original strand, 45556131 - 45556212
Alignment:
Q  145 tccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    ||||||||||||||  || ||||||||||  || ||||||||| |||||||||||||||| || || |||||||||||||||    
T  45556131 tccttgcaattagggatcgtttaaaaattggtccctgtaatcgctaatcctggcaatttatccctgcattgtttaatcattt 45556212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 124 - 204
Target Start/End: Complemental strand, 13996072 - 13995992
Alignment:
Q  124 taggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaattta 204  Q
    |||||||| |||||||||| | ||||||||||||||| ||||||||||||  || ||||||| | ||||||||||| ||||    
T  13996072 taggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 13995992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 118 - 226
Target Start/End: Complemental strand, 28230175 - 28230067
Alignment:
Q  118 aaaaattaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtt 217  Q
    |||||| |||||| |  ||||||||||||| || ||||| | ||||||||||||||  || ||||||||||||||||| |||| ||||||||  |  |||    
T  28230175 aaaaataaggctttaatatgtgtttcgtccctgtaattatgggtcatttaaaaattggtccctgtaatcgttaatcctagcaaattaccctttcaaagtt 28230076  T
Q  218 taatcattt 226  Q
    |||||||||    
T  28230075 taatcattt 28230067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 135 - 226
Target Start/End: Complemental strand, 202775 - 202684
Alignment:
Q  135 atgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||||||| |||| || ||||||| ||||||||||||||  ||  ||||||||||||||||||||| ||| ||||| |  ||||||||||||    
T  202775 atgtgttttgtccctgtaattaggggtcatttaaaaattcgtccatgtaatcgttaatcctggcaaattagccttgcagagtttaatcattt 202684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 125 - 204
Target Start/End: Original strand, 1695739 - 1695818
Alignment:
Q  125 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaattta 204  Q
    ||||||| |||||||||| | ||||||||||||||| ||||||||||||  || ||||||| | ||||||||||| ||||    
T  1695739 aggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 1695818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 125 - 204
Target Start/End: Original strand, 33062049 - 33062128
Alignment:
Q  125 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaattta 204  Q
    ||||||| |||||||||| | ||||||||||||||| ||||||||||||  || ||||||| | ||||||||||| ||||    
T  33062049 aggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 33062128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 125 - 204
Target Start/End: Complemental strand, 33062448 - 33062369
Alignment:
Q  125 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaattta 204  Q
    ||||||| |||||||||| | ||||||||||||||| ||||||||||||  || ||||||| | ||||||||||| ||||    
T  33062448 aggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 33062369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 125 - 204
Target Start/End: Original strand, 33739702 - 33739781
Alignment:
Q  125 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaattta 204  Q
    ||||||| |||||||||| | ||||||||||||||| ||||||||||||  || ||||||| | ||||||||||| ||||    
T  33739702 aggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 33739781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 121 - 204
Target Start/End: Complemental strand, 33740105 - 33740022
Alignment:
Q  121 aattaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaattta 204  Q
    ||||||||||| |||||||||| | |||| |||||||||| ||||||||||||  || ||||||| | ||||||||||| ||||    
T  33740105 aattaggcttattgatgtgtttagcccttacaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 33740022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 135 - 226
Target Start/End: Complemental strand, 39936665 - 39936575
Alignment:
Q  135 atgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    ||||||||||||| |||||||||||||  ||||||| ||  ||  ||||||||||||||||||||| ||||||||| |  ||||||||||||    
T  39936665 atgtgtttcgtccctgcaattaggcgtggtttaaaa-ttggtccttgtaatcgttaatcctggcaaattacccttgcaaagtttaatcattt 39936575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 3556423 - 3556337
Alignment:
Q  140 tttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||| |||||||||||| | ||| ||||||||||  |||||||||||||||||||| ||||  || ||||| ||| |||||||||||    
T  3556423 tttcatccttgcaattatgggtcgtttaaaaattggtctctgtaatcgttaatccttgcaaactagccttgcattctttaatcattt 3556337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 124 - 226
Target Start/End: Original strand, 6657876 - 6657978
Alignment:
Q  124 taggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatca 223  Q
    |||||||||  |||| |||  ||||||||||| || ||| ||||||||||  || ||||||||  ||||| ||||||||||||| || ||||||||||||    
T  6657876 taggcttaaatatgtatttgatccttgcaatttggggtcgtttaaaaattggtccctgtaatcactaatcatggcaatttacccctgcattgtttaatca 6657975  T
Q  224 ttt 226  Q
    |||    
T  6657976 ttt 6657978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 125 - 226
Target Start/End: Original strand, 3555249 - 3555350
Alignment:
Q  125 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcat 224  Q
    ||||||||  |||| |||| |||||||||||||| ||| ||||||||||  |||||||| |||||| ||||  ||| ||| ||||| ||| |||||||||    
T  3555249 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtctctgtattcgttattccttacaaattagccttgcattctttaatcat 3555348  T
Q  225 tt 226  Q
    ||    
T  3555349 tt 3555350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 124 - 204
Target Start/End: Original strand, 41248557 - 41248637
Alignment:
Q  124 taggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaattta 204  Q
    |||| ||| |||||||||| | ||||||||||||||| ||||||||||||  || ||||||| | ||||||||||| ||||    
T  41248557 taggtttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcatccctgtaattgctaatcctggcatttta 41248637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 124 - 204
Target Start/End: Complemental strand, 41248958 - 41248878
Alignment:
Q  124 taggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaattta 204  Q
    |||||||| ||||||||||   ||||||||||||||| ||||||||||||  || ||||||| | ||||||||||| ||||    
T  41248958 taggcttattgatgtgtttaacccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 41248878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 226
Target Start/End: Complemental strand, 37895766 - 37895675
Alignment:
Q  135 atgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||| |||| |||||||||||| | ||| |||||||| |  |  | ||||||| ||||||||||||||||| |||| |||||||||||||||    
T  37895766 atgtatttcatccttgcaattatgggtcgtttaaaaaatggttcccgtaatcgctaatcctggcaatttacacttgcattgtttaatcattt 37895675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 148 - 226
Target Start/End: Original strand, 36479740 - 36479818
Alignment:
Q  148 ttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    ||||||||||| ||| ||||||||||  ||  |||||||| ||||| | ||| |||||||||| |||||||||||||||    
T  36479740 ttgcaattaggggtcgtttaaaaattggtccatgtaatcgctaatcttagcattttacccttgcattgtttaatcattt 36479818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 135 - 200
Target Start/End: Original strand, 199030 - 199095
Alignment:
Q  135 atgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaa 200  Q
    |||||||| |||| ||||||||||  |||||||||||||| |  ||||||||||||||||| ||||    
T  199030 atgtgtttagtccctgcaattagggatcatttaaaaattagttcctgtaatcgttaatccttgcaa 199095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 204
Target Start/End: Complemental strand, 1696130 - 1696059
Alignment:
Q  133 tgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaattta 204  Q
    |||||||||| | ||||||||||||||| ||||||||||||  |  ||||||| | ||||||||||| ||||    
T  1696130 tgatgtgtttagcccttgcaattaggcggcatttaaaaattcgttcctgtaattgctaatcctggcatttta 1696059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 226
Target Start/End: Complemental strand, 43742095 - 43742004
Alignment:
Q  135 atgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||| |||||||| ||||||| |  ||||||||||||||  ||  ||||||| ||||||||| ||| ||||||||| |  ||||||||||||    
T  43742095 atgtatttcgtccctgcaattggaggtcatttaaaaattggtccatgtaatcattaatcctgacaaattacccttgcaaagtttaatcattt 43742004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 226
Target Start/End: Complemental strand, 3653496 - 3653408
Alignment:
Q  137 gtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||| |||||| || ||||| | ||||||||||||||  ||  ||||||||||||| ||||||| ||||||||| |  ||||||||||||    
T  3653496 gtgtgtcgtccctgtaattatgggtcatttaaaaattggtccatgtaatcgttaat-ctggcaaattacccttgcaaagtttaatcattt 3653408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 226
Target Start/End: Complemental strand, 6577674 - 6577605
Alignment:
Q  157 ggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||||||||||||||||  || |||||||||  ||||||||||| ||||  ||| |||||||||| ||||    
T  6577674 ggcgtcatttaaaaatttgtccctgtaatcgccaatcctggcaaattactattgcattgtttaattattt 6577605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 226
Target Start/End: Complemental strand, 25893590 - 25893546
Alignment:
Q  182 taatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||||| ||||| || ||||||||||||| |||||||||||||||    
T  25893590 taatcgctaatcttgacaatttacccttgcattgtttaatcattt 25893546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 222
Target Start/End: Original strand, 30729621 - 30729717
Alignment:
Q  126 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatc 222  Q
    |||||||  |||| |||| ||||||||||||| |||| ||||||||||  || || || ||| ||||||| |||| || |||||| ||| |||||||    
T  30729621 ggcttaaatatgtatttcatccttgcaattagacgtcgtttaaaaattggtccctatattcgctaatccttgcaaattgcccttgcattctttaatc 30729717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 84; Significance: 5e-40; HSPs: 74)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 123 - 226
Target Start/End: Original strand, 43266263 - 43266366
Alignment:
Q  123 ttaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatc 222  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||| ||||||||||||| |||||||||||    
T  43266263 ttaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccatgtaatcgttaatcctgacaatttacccttgcattgtttaatc 43266362  T
Q  223 attt 226  Q
    ||||    
T  43266363 attt 43266366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 118 - 226
Target Start/End: Complemental strand, 42618345 - 42618237
Alignment:
Q  118 aaaaattaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtt 217  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| |  ||||||||| |||||||||||||||||||||| ||||||    
T  42618345 aaaaaataggtttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagttcctgtaatcgctaatcctggcaatttacccttgcattgtt 42618246  T
Q  218 taatcattt 226  Q
    |||||||||    
T  42618245 taatcattt 42618237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 123 - 226
Target Start/End: Complemental strand, 33828403 - 33828300
Alignment:
Q  123 ttaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatc 222  Q
    ||||||||||||||| |||||||||||||||||||| ||||||||||||||| |||||||||||| |||||||| ||||||||||||| |||||||||||    
T  33828403 ttaggcttaatgatgagtttcgtccttgcaattaggtgtcatttaaaaattagtctctgtaatcgctaatcctgacaatttacccttgcattgtttaatc 33828304  T
Q  223 attt 226  Q
    ||||    
T  33828303 attt 33828300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 125 - 226
Target Start/End: Complemental strand, 23058856 - 23058755
Alignment:
Q  125 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcat 224  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||| ||  ||||||||||||||||||||||||||||| | |||||||||||||    
T  23058856 aggcttaatgatgtgtttcgtccttgcaattcggcgtcatttaaaaattaatccttgtaatcgttaatcctggcaatttaccctcgcattgtttaatcat 23058757  T
Q  225 tt 226  Q
    ||    
T  23058756 tt 23058755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 117 - 226
Target Start/End: Complemental strand, 43266701 - 43266592
Alignment:
Q  117 taaaaattaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgt 216  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||| |||| ||| ||||||||||||| |||||    
T  43266701 taaaatttaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccatgtaatcgctaattctgacaatttacccttgcattgt 43266602  T
Q  217 ttaatcattt 226  Q
    ||||||||||    
T  43266601 ttaatcattt 43266592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 126 - 226
Target Start/End: Complemental strand, 22081985 - 22081885
Alignment:
Q  126 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcatt 225  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||| | |||||||||| |||||||||||||||||||||| ||||||||||||||    
T  22081985 ggcttaatgatttgtttcgtccttgcaattatgcgtcatttaaaaattagtttctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatt 22081886  T
Q  226 t 226  Q
    |    
T  22081885 t 22081885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 126 - 226
Target Start/End: Complemental strand, 32068522 - 32068422
Alignment:
Q  126 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcatt 225  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||| || ||||||||| |||||||| ||||||||||||| ||||||||||||||    
T  32068522 ggcttaatgatgtgtttcgtccttgcaattaggagtcatttaaaaattaatccctgtaatcgctaatcctgccaatttacccttgcattgtttaatcatt 32068423  T
Q  226 t 226  Q
    |    
T  32068422 t 32068422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 126 - 226
Target Start/End: Original strand, 42617911 - 42618011
Alignment:
Q  126 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcatt 225  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || || |||||| |||||||| ||||||||||||| ||||||||||||||    
T  42617911 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctttaatcgctaatcctgacaatttacccttgcattgtttaatcatt 42618010  T
Q  226 t 226  Q
    |    
T  42618011 t 42618011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 129 - 226
Target Start/End: Original strand, 25628481 - 25628578
Alignment:
Q  129 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| ||  |||||||| |||||||||||||||||||||| |||||||||||||||    
T  25628481 ttaatgatgtgtttcgtgcttgcaattaggcgtcatttaaaaattagtcattgtaatcgataatcctggcaatttacccttgcattgtttaatcattt 25628578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 129 - 226
Target Start/End: Original strand, 32068099 - 32068196
Alignment:
Q  129 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| ||  |||||||| |||||||||||||||||||||| |||||||||||||||    
T  32068099 ttaatgatgtgtttcgtccttgcaattagacgtcatttaaaaattagtccttgtaatcgctaatcctggcaatttacccttgcattgtttaatcattt 32068196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 125 - 226
Target Start/End: Complemental strand, 32934775 - 32934674
Alignment:
Q  125 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcat 224  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| |||||||| |||||||| |||  |||||||||||||    
T  32934775 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctgacaatttactcttacattgtttaatcat 32934676  T
Q  225 tt 226  Q
    ||    
T  32934675 tt 32934674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 126 - 226
Target Start/End: Original strand, 25453128 - 25453228
Alignment:
Q  126 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcatt 225  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || || |||||| |||||||| ||||||||||||| ||| ||||||||||    
T  25453128 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctataatcgctaatcctgacaatttacccttgcattatttaatcatt 25453227  T
Q  226 t 226  Q
    |    
T  25453228 t 25453228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 128 - 226
Target Start/End: Complemental strand, 25628902 - 25628804
Alignment:
Q  128 cttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||| ||| |||||||| |||||||| ||||||||||||| |||||||||||||||    
T  25628902 cttaatgatgtgtctcgtccttgcaattatgcgtcatttaaaaattagtctatgtaatcgctaatcctgacaatttacccttgcattgtttaatcattt 25628804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 125 - 226
Target Start/End: Complemental strand, 27138368 - 27138267
Alignment:
Q  125 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcat 224  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||||| ||  |||||||| |||||||| ||||||||||||| |||||||||||||    
T  27138368 aggcttaatgatgtgtttcgtcctttcaatcaggcgtcatttaaaaattagtccttgtaatcgctaatcctgacaatttacccttgcattgtttaatcat 27138269  T
Q  225 tt 226  Q
    ||    
T  27138268 tt 27138267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 129 - 226
Target Start/End: Original strand, 28890582 - 28890679
Alignment:
Q  129 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| ||  |||||||| ||||||| |||||||||||||| |||||||||||||||    
T  28890582 ttaatgatgtgtttcgtccttgcaattagacgtcatttaaaaattagtccttgtaatcgctaatcctagcaatttacccttgcattgtttaatcattt 28890679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 129 - 226
Target Start/End: Original strand, 32934351 - 32934448
Alignment:
Q  129 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||| || ||||||||| |||||||| ||||||||||||| |||||||||||||||    
T  32934351 ttaatgatgtgtttcatccttgcaattaggtgtcatttaaaaattagtcgctgtaatcgctaatcctgacaatttacccttgcattgtttaatcattt 32934448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 129 - 225
Target Start/End: Complemental strand, 10600372 - 10600276
Alignment:
Q  129 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcatt 225  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| ||  |||||||| |||||||| ||||||||||||| ||||||||||||||    
T  10600372 ttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtccttgtaatcgctaatcctgacaatttacccttgcattgtttaatcatt 10600276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 126 - 226
Target Start/End: Original strand, 22081560 - 22081659
Alignment:
Q  126 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcatt 225  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| || || |||||| |||| ||||||||||||||||| ||||||||||||||    
T  22081560 ggcttaatgatgtgtttcgtccttgcaattatgcgtcatttaaaaattagtc-ctctaatcgctaatgctggcaatttacccttgcattgtttaatcatt 22081658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 124 - 226
Target Start/End: Complemental strand, 25453556 - 25453454
Alignment:
Q  124 taggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatca 223  Q
    |||| |||||||||||||||||| ||| ||||| ||||||||||||||||| || ||| ||||| ||||||| |||||||||||||| ||||||||||||    
T  25453556 taggtttaatgatgtgtttcgtctttgtaattaagcgtcatttaaaaattagtccctgaaatcgctaatcctagcaatttacccttgcattgtttaatca 25453457  T
Q  224 ttt 226  Q
    |||    
T  25453456 ttt 25453454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 124 - 226
Target Start/End: Complemental strand, 28469438 - 28469336
Alignment:
Q  124 taggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatca 223  Q
    |||||||||  |||| |||| |||||||||||||| ||| ||||||||||  || |||||||||||||||||||||||||||||||| ||||||||||||    
T  28469438 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatcctggcaatttacccttgcattgtttaatca 28469339  T
Q  224 ttt 226  Q
    |||    
T  28469338 ttt 28469336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 124 - 226
Target Start/End: Original strand, 39274868 - 39274970
Alignment:
Q  124 taggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatca 223  Q
    |||| |||||||||||||| |||||||||||| ||||| |||||||||||| |||||||||||| ||||||| | |||||||| ||| ||||||||||||    
T  39274868 taggtttaatgatgtgttttgtccttgcaatttggcgttatttaaaaattagtctctgtaatcgctaatcctagtaatttacctttgcattgtttaatca 39274967  T
Q  224 ttt 226  Q
    |||    
T  39274968 ttt 39274970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 129 - 226
Target Start/End: Original strand, 46204424 - 46204521
Alignment:
Q  129 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||| |||| ||||||||| ||| ||| ||| |||||||    
T  46204424 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaaacctgacaatttaccattgcattattttatcattt 46204521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 126 - 202
Target Start/End: Original strand, 10600026 - 10600102
Alignment:
Q  126 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatt 202  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||||    
T  10600026 ggctaaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctataatcgttaatcctggcaatt 10600102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 126 - 226
Target Start/End: Original strand, 23058429 - 23058529
Alignment:
Q  126 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcatt 225  Q
    ||||||||||||||||||||||||||||||| | ||||||||||||||| || |||||||   ||||||||||||| |||| ||| ||||||||||||||    
T  23058429 ggcttaatgatgtgtttcgtccttgcaattaagagtcatttaaaaattagtccctgtaattactaatcctggcaatataccattgcattgtttaatcatt 23058528  T
Q  226 t 226  Q
    |    
T  23058529 t 23058529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 10935808 - 10935894
Alignment:
Q  140 tttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||| |||||||||||||| ||| ||||||||||  || ||||||||| |||||||||||||||||||||| |||||||||||||||    
T  10935808 tttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcattt 10935894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 121 - 226
Target Start/End: Complemental strand, 13050214 - 13050108
Alignment:
Q  121 aattaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttg-tattgttta 219  Q
    |||||||||| |  ||||||||||||||||||||||||||| |||| ||| ||  || ||||||||||||||||||| ||||||||||||  ||||||||    
T  13050214 aattaggctttaatatgtgtttcgtccttgcaattaggcgtaattttaaatttcgtccctgtaatcgttaatcctggtaatttacccttgcaattgttta 13050115  T
Q  220 atcattt 226  Q
    |||||||    
T  13050114 atcattt 13050108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 145 - 226
Target Start/End: Original strand, 6571032 - 6571113
Alignment:
Q  145 tccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||||||||||||| ||| ||||||||||  || |||||||||||||||||| ||||||||||||| |||||||||||||||    
T  6571032 tccttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatcctgacaatttacccttgcattgtttaatcattt 6571113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 145 - 225
Target Start/End: Complemental strand, 32299114 - 32299034
Alignment:
Q  145 tccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcatt 225  Q
    |||||||||||||| ||| ||||||||||  || ||||||||| |||||||||||||||||||||| ||||||||||||||    
T  32299114 tccttgcaattaggagtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatt 32299034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 145 - 226
Target Start/End: Original strand, 6253490 - 6253571
Alignment:
Q  145 tccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||||||||||||| ||| ||||||||||  || ||||||||| ||||||||||||||||||| || |||||||||||||||    
T  6253490 tccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccctgcattgtttaatcattt 6253571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 145 - 226
Target Start/End: Original strand, 17102039 - 17102120
Alignment:
Q  145 tccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||||||||||||| ||| ||||||||||  || ||||||||| ||||||||||||||||||| || |||||||||||||||    
T  17102039 tccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccctgcattgtttaatcattt 17102120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 145 - 226
Target Start/End: Original strand, 19204508 - 19204589
Alignment:
Q  145 tccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||||| ||||||| ||| ||||||||||  || |||||||||||||| ||||||||||||||||| |||||||||||||||    
T  19204508 tccttgaaattaggggtcgtttaaaaattggtccctgtaatcgttaattctggcaatttacccttgcattgtttaatcattt 19204589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 145 - 226
Target Start/End: Complemental strand, 22871686 - 22871605
Alignment:
Q  145 tccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||||||||||||| ||||||||||||||  || ||||||| | ||||||| |||||||||||||| |||||||||||||||    
T  22871686 tccttgcaattaggggtcatttaaaaattggtccctgtaatagctaatccttgcaatttacccttgcattgtttaatcattt 22871605  T

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Target: chr7; HSP #33
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 122 - 223
Target Start/End: Original strand, 24388815 - 24388916
Alignment:
Q  122 attaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaat 221  Q
    ||||| |||||  |||| |||| |||||||||||| | ||| ||||||||||  |||||||| ||| ||||| |||||||||||||||||||||||||||    
T  24388815 attagacttaaatatgtatttcatccttgcaattatgggtcgtttaaaaattggtctctgtattcgctaatcatggcaatttacccttgtattgtttaat 24388914  T
Q  222 ca 223  Q
    ||    
T  24388915 ca 24388916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 138 - 226
Target Start/End: Complemental strand, 18856070 - 18855982
Alignment:
Q  138 tgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||||||||| |||||||||| ||||||||||||||  || ||||||||||||||| |||||| ||||||||| |  ||||||||||||    
T  18856070 tgtttcgtccctgcaattaggggtcatttaaaaattggtccctgtaatcgttaatcttggcaaattacccttgcaaagtttaatcattt 18855982  T

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Target: chr7; HSP #35
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 122 - 210
Target Start/End: Original strand, 32680591 - 32680679
Alignment:
Q  122 attaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttg 210  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||||||  |  ||||||| | |||||||| ||||||| |||||    
T  32680591 attaggcttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgttcctgtaattgctaatcctgacaatttagccttg 32680679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 135 - 226
Target Start/End: Original strand, 40379778 - 40379869
Alignment:
Q  135 atgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||| |||| |||||||||||||| ||| ||||||||||  ||| |||| ||| ||||||| |||||||||| |||||||||||||||||||    
T  40379778 atgtatttcatccttgcaattaggggtcgtttaaaaattggtctttgtattcgctaatccttgcaatttacctttgtattgtttaatcattt 40379869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 119 - 226
Target Start/End: Complemental strand, 46205742 - 46205635
Alignment:
Q  119 aaaattaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgttt 218  Q
    ||||| ||| ||||||||||||||||| ||||||||||    ||||||||| |||  |  |||||||||||||||||| ||| ||||||||| |||||||    
T  46205742 aaaataaggtttaatgatgtgtttcgttcttgcaattaatgatcatttaaagattggttcctgtaatcgttaatcctgacaaattacccttgcattgttt 46205643  T
Q  219 aatcattt 226  Q
    ||||||||    
T  46205642 aatcattt 46205635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 124 - 210
Target Start/End: Complemental strand, 32680994 - 32680908
Alignment:
Q  124 taggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttg 210  Q
    |||||||||||||||| || ||||||||||||||||||| ||||||||||  ||  |||||| | |||||||||||||||| |||||    
T  32680994 taggcttaatgatgtgattagtccttgcaattaggcgtcgtttaaaaattcgtccatgtaattgctaatcctggcaatttagccttg 32680908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 145 - 226
Target Start/End: Complemental strand, 16804054 - 16803973
Alignment:
Q  145 tccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||||||||||||| ||| ||||||||||  || |||||||||  |||||| |||||||||||||| |||||||||||||||    
T  16804054 tccttgcaattaggggtcgtttaaaaattggtccctgtaatcgccaatcctagcaatttacccttgcattgtttaatcattt 16803973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 145 - 226
Target Start/End: Original strand, 27991758 - 27991839
Alignment:
Q  145 tccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||||||||||||| ||| |||| |||||  || ||||||||| ||||||||||||||||||| || |||||||||||||||    
T  27991758 tccttgcaattaggggtcgtttagaaattgatccctgtaatcgctaatcctggcaatttacccctgcattgtttaatcattt 27991839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 145 - 226
Target Start/End: Original strand, 42731438 - 42731519
Alignment:
Q  145 tccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||||||||||||| ||| ||||||||||  ||  |||||||| ||||||||||||||||||| || |||||||||||||||    
T  42731438 tccttgcaattaggggtcgtttaaaaattggtccttgtaatcgctaatcctggcaatttacccctgcattgtttaatcattt 42731519  T

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Target: chr7; HSP #42
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 135 - 226
Target Start/End: Complemental strand, 2640597 - 2640506
Alignment:
Q  135 atgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||| |||| |||||  ||||||| ||| ||||||||||   ||||||||||| |||| ||||||||||||||||| |||||||||||||||    
T  2640597 atgtatttcatccttataattaggggtcgtttaaaaattggcctctgtaatcgctaattctggcaatttacccttgcattgtttaatcattt 2640506  T

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Target: chr7; HSP #43
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 135 - 226
Target Start/End: Original strand, 13044681 - 13044772
Alignment:
Q  135 atgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||||| ||||||||||||||||||| ||||||||| ||  || | ||||||| || ||||| ||||||||| ||| |||||||||||||||    
T  13044681 atgtgtctcgtccttgcaattaggcgccatttaaaatttcgtcccagtaatcgctactcctgacaatttaccattgcattgtttaatcattt 13044772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 123 - 226
Target Start/End: Complemental strand, 27397026 - 27396923
Alignment:
Q  123 ttaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatc 222  Q
    ||||||||||  |||| |||| |||||||||||||| ||| ||||||||||  || ||||||||| |||||||| ||||| |||  || |||||||||||    
T  27397026 ttaggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctgacaattcaccactgcattgtttaatc 27396927  T
Q  223 attt 226  Q
    ||||    
T  27396926 attt 27396923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 123 - 226
Target Start/End: Complemental strand, 45011035 - 45010932
Alignment:
Q  123 ttaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatc 222  Q
    ||||||||||  |||| |||| |||||||||||||| ||| ||||||||||  |   |||| ||| ||||||| |||||||||||||| |||||||||||    
T  45011035 ttaggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggttcatgtattcgctaatccttgcaatttacccttgcattgtttaatc 45010936  T
Q  223 attt 226  Q
    ||||    
T  45010935 attt 45010932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 124 - 204
Target Start/End: Complemental strand, 34929049 - 34928969
Alignment:
Q  124 taggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaattta 204  Q
    |||||||| |||||||||| | ||||||||||||||| ||||||||||||  || ||||||| | ||||||||||| ||||    
T  34929049 taggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 34928969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 219
Target Start/End: Original strand, 37656861 - 37656945
Alignment:
Q  135 atgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgttta 219  Q
    |||| |||| ||||||||||||||  || ||||||||||  |||||||||||| ||||||| ||||||||| |||| ||||||||    
T  37656861 atgtatttcatccttgcaattaggaatcgtttaaaaattggtctctgtaatcgctaatcctcgcaatttacgcttgcattgttta 37656945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 124 - 204
Target Start/End: Complemental strand, 39686933 - 39686853
Alignment:
Q  124 taggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaattta 204  Q
    |||||||| |||||||||| | ||||||||||||||| ||||||||||||  || ||||||| | ||||||||||| ||||    
T  39686933 taggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 39686853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 226
Target Start/End: Original strand, 42362450 - 42362550
Alignment:
Q  126 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcatt 225  Q
    |||||||  |||| |||| |||||||||||||| ||| ||||||||||  ||  |||| ||||||||||| |||| ||||||||| ||| ||||||||||    
T  42362450 ggcttaaatatgtatttcatccttgcaattaggtgtcgtttaaaaattggtccttgtattcgttaatccttgcaaattacccttgcattctttaatcatt 42362549  T
Q  226 t 226  Q
    |    
T  42362550 t 42362550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 123 - 226
Target Start/End: Complemental strand, 5457338 - 5457235
Alignment:
Q  123 ttaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatc 222  Q
    ||||||||||  |||| |||| |||||||||||||| ||| ||||||||||  ||  |||| ||||||||||| |||| ||||||||  | |||||||||    
T  5457338 ttaggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccttgtattcgttaatccttgcaaattaccctttcaatgtttaatc 5457239  T
Q  223 attt 226  Q
    ||||    
T  5457238 attt 5457235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 135 - 226
Target Start/End: Complemental strand, 23181413 - 23181322
Alignment:
Q  135 atgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||| |||| || ||||||||||| ||| |||||| |||  ||  |||||||| ||||| |||||||||||||||| |||||||||||||||    
T  23181413 atgtatttcatcattgcaattaggggtcgtttaaatattggtccatgtaatcgctaatcttggcaatttacccttgcattgtttaatcattt 23181322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 125 - 204
Target Start/End: Complemental strand, 30948558 - 30948479
Alignment:
Q  125 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaattta 204  Q
    ||||||| |||||||||| | ||||||||||||||| ||||||||||||  || ||||||| | ||||||||||| ||||    
T  30948558 aggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 30948479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 135 - 210
Target Start/End: Original strand, 32687406 - 32687481
Alignment:
Q  135 atgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttg 210  Q
    |||||||| ||||||| ||||||| ||||||||||| ||  || |||||||||||||||||||||| || ||||||    
T  32687406 atgtgttttgtccttgtaattaggggtcatttaaaatttggtccctgtaatcgttaatcctggcaaattgcccttg 32687481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 125 - 204
Target Start/End: Original strand, 34928649 - 34928728
Alignment:
Q  125 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaattta 204  Q
    ||||||| |||||||||| | ||||||||||||||| ||||||||||||  || ||||||| | ||||||||||| ||||    
T  34928649 aggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 34928728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 179 - 226
Target Start/End: Complemental strand, 48789178 - 48789131
Alignment:
Q  179 ctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||    
T  48789178 ctgtaatcgttaattctggcaatttacccttgcattgtttaatcattt 48789131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 135 - 200
Target Start/End: Complemental strand, 18087757 - 18087692
Alignment:
Q  135 atgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaa 200  Q
    |||||||| ||||||||||||||| ||||||||||||||  || ||||||||| ||||||| ||||    
T  18087757 atgtgtttagtccttgcaattaggggtcatttaaaaattggtcactgtaatcgctaatccttgcaa 18087692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 120 - 226
Target Start/End: Complemental strand, 29144416 - 29144310
Alignment:
Q  120 aaattaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcg-ttaatcctggcaatttacccttgtattgttt 218  Q
    |||||||||||||  |||| |||||||| |||||||||| ||| ||||||||||  ||  | |||||| |||||||| |||| ||||| ||| |||||||    
T  29144416 aaattaggcttaaatatgtatttcgtccctgcaattaggggtcgtttaaaaattggtc-atataatcgtttaatccttgcaacttacctttgcattgttt 29144318  T
Q  219 aatcattt 226  Q
    ||||||||    
T  29144317 aatcattt 29144310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 207
Target Start/End: Complemental strand, 10092287 - 10092215
Alignment:
Q  135 atgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttaccc 207  Q
    ||||||||||||| || ||||||| ||||| |||||||   || || ||||||||||||||||||| ||||||    
T  10092287 atgtgtttcgtccctgtaattaggggtcatgtaaaaatcggtccctataatcgttaatcctggcaaattaccc 10092215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 207
Target Start/End: Complemental strand, 22828237 - 22828165
Alignment:
Q  135 atgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttaccc 207  Q
    ||||||||| |||||| ||||||| ||||||||||||||  ||  |||||||||||||| || ||| ||||||    
T  22828237 atgtgtttcatccttgtaattaggggtcatttaaaaattggtccttgtaatcgttaatcttgacaaattaccc 22828165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 41899234 - 41899274
Alignment:
Q  123 ttaggcttaatgatgtgtttcgtccttgcaattaggcgtca 163  Q
    ||||| ||||||||||||||||||||||||||||| |||||    
T  41899234 ttaggtttaatgatgtgtttcgtccttgcaattagacgtca 41899274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 210
Target Start/End: Original strand, 18086298 - 18086373
Alignment:
Q  135 atgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttg 210  Q
    |||||||| ||||||||||||||| ||| ||||||||||  || |||||| || ||||||| |||| ||| |||||    
T  18086298 atgtgtttagtccttgcaattaggagtcgtttaaaaattggtccctgtaaacgataatccttgcaaattagccttg 18086373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 204
Target Start/End: Original strand, 30948167 - 30948238
Alignment:
Q  133 tgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaattta 204  Q
    ||||||||||   ||||||||||||||| ||||||||||||  || ||||||| | ||||||||||| ||||    
T  30948167 tgatgtgtttaacccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 30948238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 210
Target Start/End: Complemental strand, 32688637 - 32688562
Alignment:
Q  135 atgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttg 210  Q
    |||||||||| ||||||||||||| ||||||||||| ||  ||  |||||||| |||||||| ||| || ||||||    
T  32688637 atgtgtttcgcccttgcaattaggggtcatttaaaatttggtccttgtaatcgctaatcctgacaaattgcccttg 32688562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 125 - 204
Target Start/End: Original strand, 39686533 - 39686612
Alignment:
Q  125 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaattta 204  Q
    ||||||| |||||| |||   ||||||||||||||| ||||||||||||  || ||||||| | ||||||||||| ||||    
T  39686533 aggcttattgatgtatttaacccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 39686612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 226
Target Start/End: Complemental strand, 42020016 - 42019925
Alignment:
Q  135 atgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||| |||| |||||||||||||| ||  ||||||||||  |  || |||||| ||||| ||||||||||| |||| |||||||||| ||||    
T  42020016 atgtatttcatccttgcaattaggggttgtttaaaaattggttcctataatcgctaatcttggcaatttactcttgcattgtttaattattt 42019925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 210
Target Start/End: Complemental strand, 17886920 - 17886834
Alignment:
Q  124 taggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttg 210  Q
    |||||||||  |||| |||| ||||||||||||||  |||||||||||||  ||  |||| ||||||||||| ||||  ||||||||    
T  17886920 taggcttaaatatgtatttcatccttgcaattagggatcatttaaaaattgatccatgtattcgttaatccttgcaaactacccttg 17886834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 226
Target Start/End: Complemental strand, 43124546 - 43124480
Alignment:
Q  160 gtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    ||||||||||||||  || ||||||||| |||||||  |||  |||||||| |||||||||||||||    
T  43124546 gtcatttaaaaattggtccctgtaatcgctaatccttacaaactacccttgcattgtttaatcattt 43124480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 226
Target Start/End: Original strand, 45010652 - 45010698
Alignment:
Q  180 tgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||||||| ||||| ||||||||||| |||| |||||||||||||||    
T  45010652 tgtaatcgctaatcttggcaatttacgcttgcattgtttaatcattt 45010698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 208
Target Start/End: Complemental strand, 20426761 - 20426676
Alignment:
Q  123 ttaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttaccct 208  Q
    ||||||||||  |||| |||| ||| |||||||||  ||| ||||||||||  || ||||| ||| ||||||||||| ||||||||    
T  20426761 ttaggcttaaatatgtatttcatccctgcaattagaggtcgtttaaaaattggtccctgtattcgctaatcctggcattttaccct 20426676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 135 - 208
Target Start/End: Original strand, 23608817 - 23608890
Alignment:
Q  135 atgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttaccct 208  Q
    |||||||| |||||||||| |||| ||||||||||||||  || ||||| |  |||||||||||| ||| ||||    
T  23608817 atgtgtttagtccttgcaaataggggtcatttaaaaattggtccctgtatttcttaatcctggcattttgccct 23608890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 125 - 158
Target Start/End: Original strand, 33828188 - 33828221
Alignment:
Q  125 aggcttaatgatgtgtttcgtccttgcaattagg 158  Q
    ||||||||| ||||||||||||||||||||||||    
T  33828188 aggcttaataatgtgtttcgtccttgcaattagg 33828221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 173
Target Start/End: Original strand, 28105492 - 28105548
Alignment:
Q  117 taaaaattaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaatt 173  Q
    ||||||||||||||||  |||| |||| |||||||||||| | ||| ||||||||||    
T  28105492 taaaaattaggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaatt 28105548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 226
Target Start/End: Complemental strand, 32053515 - 32053471
Alignment:
Q  182 taatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||||||||||||| |||||||| | ||| |||||||||||||||    
T  32053515 taatcgttaatcctagcaatttatcattgcattgtttaatcattt 32053471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 226
Target Start/End: Original strand, 33808323 - 33808423
Alignment:
Q  126 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcatt 225  Q
    |||||||  |||| |||| | |||| ||||| ||||| ||||||||||  |||||||| ||| ||||||| |||| |||  |||| ||| ||||||||||    
T  33808323 ggcttaaatatgtatttcattcttgaaattacgcgtcgtttaaaaattggtctctgtattcgctaatccttgcaaattagtcttgcattctttaatcatt 33808422  T
Q  226 t 226  Q
    |    
T  33808423 t 33808423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 83; Significance: 2e-39; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 124 - 226
Target Start/End: Complemental strand, 11568 - 11466
Alignment:
Q  124 taggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatca 223  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||| ||||||||||||    
T  11568 taggcttaatgatgtgtttcatccttgcaattaggcgtcatttaaaaattagtccatgtaatcgttaatcctggcaatttacccttgcattgtttaatca 11469  T
Q  224 ttt 226  Q
    |||    
T  11468 ttt 11466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 124 - 226
Target Start/End: Original strand, 11138 - 11240
Alignment:
Q  124 taggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatca 223  Q
    |||| |||||||||||||||||| |||||||||| |||||| ||||||||| ||||||| |||| ||||| |||||||||||||||| ||||||||||||    
T  11138 taggtttaatgatgtgtttcgtcgttgcaattagtcgtcatctaaaaattagtctctgtgatcgctaatcttggcaatttacccttgcattgtttaatca 11237  T
Q  224 ttt 226  Q
    |||    
T  11238 ttt 11240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 83; Significance: 2e-39; HSPs: 73)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 124 - 226
Target Start/End: Complemental strand, 234168 - 234066
Alignment:
Q  124 taggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatca 223  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||||| |||||||||||||||||||||||| ||||||||||||    
T  234168 taggcttaatgatgtgtttcgtccttgcaattaggcatcatttaaaaattagtccctgtaattgttaatcctggcaatttacccttgcattgtttaatca 234069  T
Q  224 ttt 226  Q
    |||    
T  234068 ttt 234066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 124 - 226
Target Start/End: Complemental strand, 710579 - 710477
Alignment:
Q  124 taggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatca 223  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||||| |||||||||||||||||||||||| ||||||||||||    
T  710579 taggcttaatgatgtgtttcgtccttgcaattaggcatcatttaaaaattagtccctgtaattgttaatcctggcaatttacccttgcattgtttaatca 710480  T
Q  224 ttt 226  Q
    |||    
T  710479 ttt 710477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 124 - 226
Target Start/End: Complemental strand, 747791 - 747689
Alignment:
Q  124 taggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatca 223  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||||| |||||||||||||||||||||||| ||||||||||||    
T  747791 taggcttaatgatgtgtttcgtccttgcaattaggcatcatttaaaaattagtccctgtaattgttaatcctggcaatttacccttgcattgtttaatca 747692  T
Q  224 ttt 226  Q
    |||    
T  747691 ttt 747689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 124 - 226
Target Start/End: Complemental strand, 871686 - 871584
Alignment:
Q  124 taggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatca 223  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||||| |||||||||||||||||||||||| ||||||||||||    
T  871686 taggcttaatgatgtgtttcgtccttgcaattaggcatcatttaaaaattagtccctgtaattgttaatcctggcaatttacccttgcattgtttaatca 871587  T
Q  224 ttt 226  Q
    |||    
T  871586 ttt 871584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 124 - 226
Target Start/End: Original strand, 7983426 - 7983528
Alignment:
Q  124 taggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatca 223  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||| || ||||||||| |||||||||||||||||||||| ||||||||||||    
T  7983426 taggcttaattatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatca 7983525  T
Q  224 ttt 226  Q
    |||    
T  7983526 ttt 7983528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 128 - 226
Target Start/End: Complemental strand, 44664932 - 44664834
Alignment:
Q  128 cttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| ||||||||||||| |||||||||||||||    
T  44664932 cttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctctgtaatcgctaatcctgacaatttacccttgcattgtttaatcattt 44664834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 126 - 226
Target Start/End: Original strand, 15229931 - 15230031
Alignment:
Q  126 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcatt 225  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||||| |||||||||||||||||||||| ||||||||||||||    
T  15229931 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttggattgtttaatcatt 15230030  T
Q  226 t 226  Q
    |    
T  15230031 t 15230031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 126 - 226
Target Start/End: Original strand, 44664508 - 44664608
Alignment:
Q  126 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcatt 225  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| ||||| ||||||||||||||    
T  44664508 ggcttaattatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgttaatcctggcaatttaaccttgcattgtttaatcatt 44664607  T
Q  226 t 226  Q
    |    
T  44664608 t 44664608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 123 - 226
Target Start/End: Original strand, 6471687 - 6471790
Alignment:
Q  123 ttaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatc 222  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| | ||||| |||||| |||||||||||||||||||||| |||||||||||    
T  6471687 ttaggtttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaatgagtctctataatcgctaatcctggcaatttacccttgcattgtttaatc 6471786  T
Q  223 attt 226  Q
    ||||    
T  6471787 attt 6471790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 124 - 226
Target Start/End: Complemental strand, 10445763 - 10445661
Alignment:
Q  124 taggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatca 223  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||||| || ||||||||| |||||||||||||||||||||| ||||||||||||    
T  10445763 taggtttaatgatgtgtttcgtccttgcaattaggtgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatca 10445664  T
Q  224 ttt 226  Q
    |||    
T  10445663 ttt 10445661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 124 - 226
Target Start/End: Complemental strand, 35634527 - 35634425
Alignment:
Q  124 taggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatca 223  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||| |||||||| ||||||||||||| ||||||||||||    
T  35634527 taggcttaatgatgtgtttcgtccttgcaattaagcgtcatttaaaaattagtccctgtaatcgctaatcctgacaatttacccttgcattgtttaatca 35634428  T
Q  224 ttt 226  Q
    |||    
T  35634427 ttt 35634425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 126 - 226
Target Start/End: Complemental strand, 25124989 - 25124889
Alignment:
Q  126 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcatt 225  Q
    |||||||| |||||||||||||||||||||||| ||||||||||||||| |||||||||||| |||| ||||||||||||||||| ||||||||||||||    
T  25124989 ggcttaatcatgtgtttcgtccttgcaattaggtgtcatttaaaaattagtctctgtaatcgctaattctggcaatttacccttgcattgtttaatcatt 25124890  T
Q  226 t 226  Q
    |    
T  25124889 t 25124889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 129 - 226
Target Start/End: Original strand, 37542227 - 37542324
Alignment:
Q  129 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| || || |||||| |||||||||||||||||||||| |||||||||||||||    
T  37542227 ttaatgatgtgtttcgtctttgcaattaggcgtcatttaaaaattagtccctttaatcgctaatcctggcaatttacccttgcattgtttaatcattt 37542324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 125 - 226
Target Start/End: Complemental strand, 15230358 - 15230257
Alignment:
Q  125 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcat 224  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||||||| || ||||||||| ||||| || ||||||||||||| |||||||||||||    
T  15230358 aggcttaatgatgtgttttgtccttgcaattaggtgtcatttaaaaattagtccctgtaatcgctaatcttgacaatttacccttgcattgtttaatcat 15230259  T
Q  225 tt 226  Q
    ||    
T  15230258 tt 15230257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 129 - 226
Target Start/End: Original strand, 25124566 - 25124663
Alignment:
Q  129 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||||||||| |||||| |||||||||||||||||||||||||||| ||  |||||||| |||||||||||||||||||||| |||||||||||||||    
T  25124566 ttaatgatgtatttcgttcttgcaattaggcgtcatttaaaaattagtccatgtaatcgctaatcctggcaatttacccttgcattgtttaatcattt 25124663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 128 - 226
Target Start/End: Complemental strand, 8998113 - 8998015
Alignment:
Q  128 cttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |   |||||||| ||||| || ||||||||||||| |||||||||||||||    
T  8998113 cttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagttcatgtaatcgctaatcatgacaatttacccttgcattgtttaatcattt 8998015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 129 - 210
Target Start/End: Complemental strand, 38003829 - 38003748
Alignment:
Q  129 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttg 210  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||| |||||||||||| ||||||||||||||||||||||    
T  38003829 ttaatgatgtgtttcgtccttgcaattagtcgtaatttaaaaattagtctctgtaatcgctaatcctggcaatttacccttg 38003748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 129 - 226
Target Start/End: Original strand, 41353577 - 41353674
Alignment:
Q  129 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||||||| |||||||||||| |||||||||||||||||||||||| | |||||||||| |||||||  ||||||||||||| |||||||||||||||    
T  41353577 ttaatgatatgtttcgtccttacaattaggcgtcatttaaaaattagtttctgtaatcgctaatcctaacaatttacccttgcattgtttaatcattt 41353674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 129 - 226
Target Start/End: Complemental strand, 42945537 - 42945440
Alignment:
Q  129 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| |  ||||||||| |||||||| |||||||| |||| |||||||||||||||    
T  42945537 ttaatgatgtgtttcgttcttgcaattaggcgtcatttaaaaattagttcctgtaatcgctaatcctgacaatttactcttgcattgtttaatcattt 42945440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 129 - 216
Target Start/End: Original strand, 8997859 - 8997946
Alignment:
Q  129 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgt 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || ||| ||||| |||||||| ||||||||||||| |||||    
T  8997859 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgcaatcgctaatcctgacaatttacccttgcattgt 8997946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 128 - 226
Target Start/End: Original strand, 21432695 - 21432793
Alignment:
Q  128 cttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||| |||||||||||  ||||  || ||||||||||||| |||||||||||||||    
T  21432695 cttaatgatgtgtttcgtccttgcaattagacgtcatataaaaattagtctctgtaatcactaattttgacaatttacccttgcattgtttaatcattt 21432793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 125 - 226
Target Start/End: Complemental strand, 41354000 - 41353899
Alignment:
Q  125 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcat 224  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||| || ||||||||  |||||||| ||||||||||| | ||| |||||||||    
T  41354000 aggcttaatgatgtgtttcgtccttataattaggcgtcatttaaaaattagtccctgtaatcactaatcctgacaatttaccctagcattatttaatcat 41353901  T
Q  225 tt 226  Q
    ||    
T  41353900 tt 41353899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 124 - 226
Target Start/End: Complemental strand, 23663944 - 23663842
Alignment:
Q  124 taggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatca 223  Q
    |||||||||  |||| |||  |||||||||||||| ||| ||||||||||  |||||||||||| |||||||||||||||||||||| ||||||||||||    
T  23663944 taggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcctggcaatttacccttgcattgtttaatca 23663845  T
Q  224 ttt 226  Q
    |||    
T  23663844 ttt 23663842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 129 - 210
Target Start/End: Complemental strand, 36325628 - 36325547
Alignment:
Q  129 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttg 210  Q
    ||||||||||| || ||||||||||||||||||||||||||||||  |||||||||| |||||||||||||||||| |||||    
T  36325628 ttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtctctgtaattgttaatcctggcaatttagccttg 36325547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 123 - 210
Target Start/End: Original strand, 11674692 - 11674779
Alignment:
Q  123 ttaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttg 210  Q
    ||||||||||||||||| || ||||||||||||||||||| ||||||||||  || ||||||| |||||||||||||||||| |||||    
T  11674692 ttaggcttaatgatgtgattagtccttgcaattaggcgtcgtttaaaaattcgtccctgtaattgttaatcctggcaatttagccttg 11674779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 124 - 210
Target Start/End: Complemental strand, 11675093 - 11675007
Alignment:
Q  124 taggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttg 210  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||||  || ||||||| | |||||||||||||||| |||||    
T  11675093 taggcttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaatcctggcaatttagccttg 11675007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 125 - 226
Target Start/End: Complemental strand, 4995085 - 4994985
Alignment:
Q  125 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcat 224  Q
    ||||||||  |||| |||| |||||||||||||| ||||||||||||||  || ||||||||| |||||||| ||||||||||||| |||||||||||||    
T  4995085 aggcttaaatatgtatttcatccttgcaattaggggtcatttaaaaattggtc-ctgtaatcgctaatcctgacaatttacccttgcattgtttaatcat 4994987  T
Q  225 tt 226  Q
    ||    
T  4994986 tt 4994985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 125 - 226
Target Start/End: Complemental strand, 40318393 - 40318292
Alignment:
Q  125 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcat 224  Q
    ||||||||  |||| |||| |||||||||||||| ||  ||||||||||| ||  |||||||| |||||||||||||||||||||| |||||||||||||    
T  40318393 aggcttaaatatgtatttcatccttgcaattaggggttgtttaaaaattagtccatgtaatcgctaatcctggcaatttacccttgcattgtttaatcat 40318294  T
Q  225 tt 226  Q
    ||    
T  40318293 tt 40318292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 126 - 226
Target Start/End: Original strand, 39071676 - 39071776
Alignment:
Q  126 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcatt 225  Q
    |||||||  |||| |||| |||||||||||||| ||| ||||||||||  || ||||||||| |||||||| ||||||||||||| ||||||||||||||    
T  39071676 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatt 39071775  T
Q  226 t 226  Q
    |    
T  39071776 t 39071776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 115 - 210
Target Start/End: Original strand, 23505041 - 23505136
Alignment:
Q  115 actaaaaattaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttg 210  Q
    |||||||  |||||||||||||||| || ||||||||||||||||||||||||||||||  ||  |||||| | ||||| ||||||||||||||||    
T  23505041 actaaaatctaggcttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccatgtaattgctaatcttggcaatttacccttg 23505136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 123 - 210
Target Start/End: Complemental strand, 23507856 - 23507769
Alignment:
Q  123 ttaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttg 210  Q
    ||||||||||||||||| || |||||||||||||||||||||||||||||   || ||||||| | ||||||| ||||||||||||||    
T  23507856 ttaggcttaatgatgtgattagtccttgcaattaggcgtcatttaaaaatacgtccctgtaattgctaatccttgcaatttacccttg 23507769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 123 - 226
Target Start/End: Complemental strand, 23698675 - 23698572
Alignment:
Q  123 ttaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatc 222  Q
    ||||||||||  |||| |||  |||||| ||||||| ||| ||||||||||  || ||||||||| |||||||||||||||||||||| |||||||||||    
T  23698675 ttaggcttaaatatgtatttgatccttgtaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatc 23698576  T
Q  223 attt 226  Q
    ||||    
T  23698575 attt 23698572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 145 - 226
Target Start/End: Complemental strand, 8316997 - 8316916
Alignment:
Q  145 tccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||||||||||||| ||| ||||||||||  ||  |||||||| |||||||||||||||||||||| |||||||||||||||    
T  8316997 tccttgcaattaggggtcgtttaaaaattggtccttgtaatcgctaatcctggcaatttacccttgcattgtttaatcattt 8316916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 145 - 226
Target Start/End: Complemental strand, 12273262 - 12273181
Alignment:
Q  145 tccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||||||||||||| ||| ||||||||||  || |||||||||||||||| | ||||||||||||| |||||||||||||||    
T  12273262 tccttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatcccgtcaatttacccttgcattgtttaatcattt 12273181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 129 - 226
Target Start/End: Complemental strand, 37542648 - 37542551
Alignment:
Q  129 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    ||||| ||||||||| ||||| |||||||||||||||||||||||  |  |||| ||||||||| |||  |||||||||||| |||||||||||||||    
T  37542648 ttaataatgtgtttcatccttacaattaggcgtcatttaaaaattggttcctgttatcgttaattctgataatttacccttgcattgtttaatcattt 37542551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 126 - 226
Target Start/End: Complemental strand, 16388954 - 16388854
Alignment:
Q  126 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcatt 225  Q
    |||||||  |||| |||| |||||||||||||| ||||||||||||||  |   |||||| | |||||||||||||||||||||| ||||||||||||||    
T  16388954 ggcttaaatatgtatttcatccttgcaattaggggtcatttaaaaattggttcatgtaattgctaatcctggcaatttacccttgcattgtttaatcatt 16388855  T
Q  226 t 226  Q
    |    
T  16388854 t 16388854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 135 - 226
Target Start/End: Complemental strand, 2535969 - 2535878
Alignment:
Q  135 atgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||| |||||||| |||||||||| ||||||||||||||  || |||||||||||||||||||||| ||||||||  |  ||||||||||||    
T  2535969 atgtatttcgtccctgcaattaggggtcatttaaaaattggtccctgtaatcgttaatcctggcaaattacccttacaaagtttaatcattt 2535878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 126 - 172
Target Start/End: Complemental strand, 6472441 - 6472395
Alignment:
Q  126 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaat 172  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  6472441 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaat 6472395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 125 - 210
Target Start/End: Original strand, 36325233 - 36325318
Alignment:
Q  125 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttg 210  Q
    ||||||||||||||| || |||||| |||||||| ||| ||||||||||  || ||||||| |||||||||||||||||| |||||    
T  36325233 aggcttaatgatgtgattagtccttacaattaggggtcgtttaaaaattcgtccctgtaattgttaatcctggcaatttagccttg 36325318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 125 - 204
Target Start/End: Original strand, 2266491 - 2266570
Alignment:
Q  125 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaattta 204  Q
    ||||||| |||||||||| | ||||||||||||||| ||||||||||||  |||||||||| | ||||||||||| ||||    
T  2266491 aggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtctctgtaattgctaatcctggcatttta 2266570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 135 - 210
Target Start/End: Complemental strand, 10749927 - 10749852
Alignment:
Q  135 atgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttg 210  Q
    ||||||||||||||||||||||||  |||||||||||||  ||  ||||||||||||||||| ||| |||||||||    
T  10749927 atgtgtttcgtccttgcaattagggatcatttaaaaattggtccatgtaatcgttaatcctgtcaaattacccttg 10749852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 125 - 226
Target Start/End: Original strand, 13186059 - 13186160
Alignment:
Q  125 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcat 224  Q
    ||||||||  |||| |||| ||||||||||||||  || ||||||||||  |   |||||||| |||||||| ||||||||||||| |||||||||||||    
T  13186059 aggcttaaatatgtatttcatccttgcaattagggatcgtttaaaaattggttcatgtaatcgctaatcctgacaatttacccttgcattgtttaatcat 13186158  T
Q  225 tt 226  Q
    ||    
T  13186159 tt 13186160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 145 - 226
Target Start/End: Original strand, 36928495 - 36928576
Alignment:
Q  145 tccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    ||||| |||||| | ||| ||||||||||  ||| |||||||| |||||||| ||||||||||||| |||||||||||||||    
T  36928495 tcctttcaattaagggtcgtttaaaaattggtctatgtaatcgctaatcctgacaatttacccttgcattgtttaatcattt 36928576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 123 - 204
Target Start/End: Complemental strand, 38845699 - 38845618
Alignment:
Q  123 ttaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaattta 204  Q
    ||||||||| |||||||||| | ||||||||||||||| ||||||||||||  || ||||||| | ||||||||||| ||||    
T  38845699 ttaggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 38845618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 158 - 226
Target Start/End: Original strand, 38003487 - 38003555
Alignment:
Q  158 gcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    ||||||||||||||||| | |||||||||| ||||  || ||||||| |||||||||||||||||||||    
T  38003487 gcgtcatttaaaaattagtttctgtaatcgctaattatgacaatttaaccttgtattgtttaatcattt 38003555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 125 - 204
Target Start/End: Complemental strand, 2266890 - 2266811
Alignment:
Q  125 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaattta 204  Q
    ||||||| |||||||||| | ||||||||||||||| ||||||||||||  || ||||||| | ||||||||||| ||||    
T  2266890 aggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 2266811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 129 - 224
Target Start/End: Original strand, 27500092 - 27500187
Alignment:
Q  129 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcat 224  Q
    |||||||| |||||||||||||||||||  |||||||||||||||| ||  || ||||| |||| ||| ||| |||| | || |||||||||||||    
T  27500092 ttaatgatatgtttcgtccttgcaattaaacgtcatttaaaaattagtccatgcaatcgctaattctgacaaattactcatgcattgtttaatcat 27500187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 159 - 226
Target Start/End: Original strand, 39474579 - 39474646
Alignment:
Q  159 cgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||||||||||||||| |   |||||||| ||||| |||||||||||||||| |||||||||||||||    
T  39474579 cgtcatttaaaaattaattcttgtaatcgctaatcttggcaatttacccttgcattgtttaatcattt 39474646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 125 - 204
Target Start/End: Original strand, 40775649 - 40775728
Alignment:
Q  125 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaattta 204  Q
    ||||||| |||||||||| | ||||||||||||||| ||||||||||||  |  ||||||| ||||||||||||| ||||    
T  40775649 aggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgttcctgtaattgttaatcctggcatttta 40775728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 226
Target Start/End: Complemental strand, 22915767 - 22915686
Alignment:
Q  145 tccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    ||||||||| ||||  || ||||||||||  ||  |||||||| ||||| |||||||||||||||| |||||||||||||||    
T  22915767 tccttgcaactagggatcgtttaaaaattggtccatgtaatcgctaatcttggcaatttacccttgcattgtttaatcattt 22915686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 123 - 204
Target Start/End: Original strand, 44406854 - 44406935
Alignment:
Q  123 ttaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaattta 204  Q
    ||||| ||| |||||||||| | ||||||||||||||| ||||||||||||  || ||||||| | ||||||||||| ||||    
T  44406854 ttaggtttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 44406935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 210
Target Start/End: Original strand, 8746324 - 8746408
Alignment:
Q  126 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttg 210  Q
    |||||||  ||||||||| ||| |||||||||| |||||||||||||   || ||||||||||||||| || ||| |||||||||    
T  8746324 ggcttaagtatgtgtttcctccctgcaattaggggtcatttaaaaatcggtcactgtaatcgttaatcgtgacaaattacccttg 8746408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 226
Target Start/End: Complemental strand, 42803646 - 42803546
Alignment:
Q  126 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcatt 225  Q
    |||||||  |||| |||| |||||||||||||  ||| ||||||||||  || || |||||   |||| |||||||||||||||| ||||||||||||||    
T  42803646 ggcttaaatatgtatttcatccttgcaattagaagtcgtttaaaaattggtccctataatcaccaatcgtggcaatttacccttgcattgtttaatcatt 42803547  T
Q  226 t 226  Q
    |    
T  42803546 t 42803546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 138 - 196
Target Start/End: Complemental strand, 27500492 - 27500434
Alignment:
Q  138 tgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctg 196  Q
    ||||||||||||||||||| | ||||||||||||||  ||  |||||||||||||||||    
T  27500492 tgtttcgtccttgcaattatgggtcatttaaaaattggtccatgtaatcgttaatcctg 27500434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 31608927 - 31608841
Alignment:
Q  140 tttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||| |||||||||||| | ||| ||||||||||  ||  |||| ||| ||||||| |||||||||||||| ||||| |||||||||    
T  31608927 tttcatccttgcaattaagggtcgtttaaaaattggtccatgtattcgctaatccttgcaatttacccttgcattgtctaatcattt 31608841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 126 - 204
Target Start/End: Complemental strand, 44407254 - 44407176
Alignment:
Q  126 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaattta 204  Q
    |||||| |||||||||| | ||||||||||||||| ||||||||||||  || ||||||| | ||||||| ||| ||||    
T  44407254 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcatccctgtaattgctaatcctagcatttta 44407176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 226
Target Start/End: Complemental strand, 1425430 - 1425350
Alignment:
Q  145 tccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||||| ||||||  ||| ||||||||||  || ||||||||  ||||||||||||||||||| || |||||||||||||||    
T  1425430 tccttgtaattagaggtcgtttaaaaattggtc-ctgtaatcactaatcctggcaatttacccctgcattgtttaatcattt 1425350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 204
Target Start/End: Complemental strand, 3041856 - 3041775
Alignment:
Q  123 ttaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaattta 204  Q
    ||||||||| |||||||||| |  |||||||||||||| |||||||||| |  || ||||||| | ||||||||||| ||||    
T  3041856 ttaggcttattgatgtgtttagctcttgcaattaggcggcatttaaaaactcgtccctgtaattgctaatcctggcatttta 3041775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 226
Target Start/End: Original strand, 35756606 - 35756682
Alignment:
Q  149 tgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||||||||| ||||||||||||||  ||| | |||||  |||||||| ||||||| ||||| |||||||||||||||    
T  35756606 tgcaattaggggtcatttaaaaattggtct-tataatcactaatcctgacaatttatccttgaattgtttaatcattt 35756682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 226
Target Start/End: Original strand, 38955722 - 38955803
Alignment:
Q  145 tccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    ||||||||||| ||  || ||||||||||  ||  |||||||| ||||||||| ||||||||| || |||||||||||||||    
T  38955722 tccttgcaattggggatcgtttaaaaattggtcattgtaatcgctaatcctggtaatttacccctgcattgtttaatcattt 38955803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 226
Target Start/End: Complemental strand, 4406088 - 4405988
Alignment:
Q  126 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcatt 225  Q
    |||||||  |||| |||| |||||| ||||||| ||  ||||||||||  ||  |||| | ||||||||| |||||||||||||| | ||||||||||||    
T  4406088 ggcttaaatatgtatttcatccttgtaattaggggttgtttaaaaattggtccatgtatttgttaatccttgcaatttacccttgcaatgtttaatcatt 4405989  T
Q  226 t 226  Q
    |    
T  4405988 t 4405988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 226
Target Start/End: Original strand, 42945158 - 42945214
Alignment:
Q  170 aattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    ||||| || ||||||| | |||||||| |||||||||||| ||||||||||||||||    
T  42945158 aattagtccctgtaattgctaatcctgacaatttacccttatattgtttaatcattt 42945214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 226
Target Start/End: Original strand, 34060482 - 34060589
Alignment:
Q  119 aaaattaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgttt 218  Q
    ||||||||||||||  |||| |||| ||||||||||||  |||| ||||||||||  ||  |||||||| ||||||| |||| ||  | ||| ||| |||    
T  34060482 aaaattaggcttaaatatgtatttcatccttgcaattaaacgtcgtttaaaaattggtccatgtaatcgctaatccttgcaaattgtcgttgcattcttt 34060581  T
Q  219 aatcattt 226  Q
    ||||||||    
T  34060582 aatcattt 34060589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 204
Target Start/End: Original strand, 38845306 - 38845377
Alignment:
Q  133 tgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaattta 204  Q
    ||||||||||   ||||||||||||||| ||||||||||||  || ||||||| | ||||||||||| ||||    
T  38845306 tgatgtgtttaacccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 38845377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 6472078 - 6472016
Alignment:
Q  164 tttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    ||||||||||| |   ||||||||  ||||||| ||||||||||||| |||||||||||||||    
T  6472078 tttaaaaattagttcatgtaatcgccaatcctgacaatttacccttgcattgtttaatcattt 6472016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 226
Target Start/End: Complemental strand, 21433065 - 21433019
Alignment:
Q  180 tgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||||||||||||  || ||||||||||||| |||||||||||||||    
T  21433065 tgtaatcgttaattttgacaatttacccttgcattgtttaatcattt 21433019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 196
Target Start/End: Complemental strand, 40776047 - 40775977
Alignment:
Q  126 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctg 196  Q
    |||||| ||||||||||   ||||||||||||||| ||||||||||||  || ||||||| | ||||||||    
T  40776047 ggcttattgatgtgtttaacccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctg 40775977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 223
Target Start/End: Original strand, 30459371 - 30459468
Alignment:
Q  126 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatca 223  Q
    |||||||  |||| |||| ||||| |||||||||||| ||||||||||| ||| |||| ||  ||||||| |||| ||||  ||| ||| ||||||||    
T  30459371 ggcttaaatatgtatttcatccttacaattaggcgtcgtttaaaaattagtctatgtattcactaatccttgcaaattacaattgcattctttaatca 30459468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 226
Target Start/End: Complemental strand, 34061737 - 34061656
Alignment:
Q  145 tccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    ||||||||||||| |||| ||||||||||  ||  |||| ||| ||||||| |||| || |||||| ||| |||||||||||    
T  34061737 tccttgcaattagacgtcgtttaaaaattgatccatgtattcgctaatccttgcaaattgcccttgcattctttaatcattt 34061656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 204
Target Start/End: Complemental strand, 35450009 - 35449928
Alignment:
Q  123 ttaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaattta 204  Q
    ||||||||| |||||| |||   ||||||||||||||| ||||||||||||  ||  |||||| | ||||||||||| ||||    
T  35450009 ttaggcttattgatgtatttatcccttgcaattaggcggcatttaaaaattcgtccatgtaattgctaatcctggcatttta 35449928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 226
Target Start/End: Complemental strand, 36186495 - 36186395
Alignment:
Q  123 ttaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatc 222  Q
    ||||||||||  |||| |||| |||||||||||| | ||| ||||||| |     ||| |||||| |||||||| ||||||||| ||| |||||||||||    
T  36186495 ttaggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaattgg---tctataatcgctaatcctgacaatttacctttgcattgtttaatc 36186399  T
Q  223 attt 226  Q
    ||||    
T  36186398 attt 36186395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 135 - 200
Target Start/End: Complemental strand, 38862982 - 38862917
Alignment:
Q  135 atgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaa 200  Q
    |||| |||| |||||||||||||| ||| ||||||||||  |||||||| ||| ||||||| ||||    
T  38862982 atgtatttcatccttgcaattaggggtcgtttaaaaattggtctctgtattcgctaatccttgcaa 38862917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 135 - 200
Target Start/End: Original strand, 40317973 - 40318038
Alignment:
Q  135 atgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaa 200  Q
    |||| |||| |||||||||||||| ||| ||||||||||  |||||||| ||| ||||||| ||||    
T  40317973 atgtatttcatccttgcaattaggggtcgtttaaaaatttgtctctgtattcgctaatccttgcaa 40318038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 83; Significance: 2e-39; HSPs: 50)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 124 - 226
Target Start/End: Original strand, 7160802 - 7160904
Alignment:
Q  124 taggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatca 223  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||| ||||||||||||    
T  7160802 taggtttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctctgtaatcgctaatcctggcaatttactcttgcattgtttaatca 7160901  T
Q  224 ttt 226  Q
    |||    
T  7160902 ttt 7160904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 127 - 226
Target Start/End: Original strand, 7905244 - 7905343
Alignment:
Q  127 gcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||| ||| |||||||||||    
T  7905244 gcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccttgtaatcgttaatcctggcaatttacccttgcattatttaatcattt 7905343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 117 - 226
Target Start/End: Complemental strand, 22503209 - 22503100
Alignment:
Q  117 taaaaattaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgt 216  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| ||  |||||||| |||||||||||||||| ||||| |||||    
T  22503209 taaaaataaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccttgtaatcgctaatcctggcaatttatccttgcattgt 22503110  T
Q  217 ttaatcattt 226  Q
    ||||||||||    
T  22503109 ttaatcattt 22503100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 126 - 226
Target Start/End: Original strand, 6517503 - 6517602
Alignment:
Q  126 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcatt 225  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||| ||||| ||||||||||||||    
T  6517503 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctttgtaatcgctaatcctggcaattta-ccttgcattgtttaatcatt 6517601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 123 - 222
Target Start/End: Original strand, 10781144 - 10781243
Alignment:
Q  123 ttaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatc 222  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| || ||| |||||||| || ||||||||||||||||||||||||||||    
T  10781144 ttaggcttaatgatgtgtttcgtccttacaattaggcgtcatttaaaaattagtccctgcaatcgttattcgtggcaatttacccttgtattgtttaatc 10781243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 123 - 226
Target Start/End: Original strand, 22502771 - 22502874
Alignment:
Q  123 ttaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatc 222  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||| |||||||| ||||||||||||| |||||||||||    
T  22502771 ttaggtttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccttgtaatcgctaatcctgacaatttacccttgcattgtttaatc 22502870  T
Q  223 attt 226  Q
    ||||    
T  22502871 attt 22502874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 129 - 226
Target Start/End: Original strand, 21836035 - 21836131
Alignment:
Q  129 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||||||| |||||||||||||||    
T  21836035 ttaatgatgtgtttcgttcttgcaattaggcgtcatttaaaaattagtct-tgtaatcgctaatcctggcaatttacccttgcattgtttaatcattt 21836131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 129 - 226
Target Start/End: Complemental strand, 31407301 - 31407204
Alignment:
Q  129 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| || ||||||||| |||||||| ||||||||||||| |||||||||||||||    
T  31407301 ttaatgatgtgcttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctgacaatttacccttgcattgtttaatcattt 31407204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 123 - 226
Target Start/End: Complemental strand, 21836459 - 21836356
Alignment:
Q  123 ttaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatc 222  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||| |   |||||||| |||||||| ||||||||||||| |||||||||||    
T  21836459 ttaggcttaatgatgtgtttcatccttgcaattaggcgtcatttaaaaattagttcttgtaatcgctaatcctgacaatttacccttgcattgtttaatc 21836360  T
Q  223 attt 226  Q
    ||||    
T  21836359 attt 21836356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 126 - 226
Target Start/End: Original strand, 31406878 - 31406978
Alignment:
Q  126 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcatt 225  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| |||||  ||||| ||| ||||||||||    
T  31406878 ggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgttaatcctggtaatttgtccttgcattatttaatcatt 31406977  T
Q  226 t 226  Q
    |    
T  31406978 t 31406978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 123 - 226
Target Start/End: Complemental strand, 7161233 - 7161130
Alignment:
Q  123 ttaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatc 222  Q
    |||||||||||||| | ||||||||||||||||||||||||||||||||||| || || |||||  |||||||| ||||||||||||| |||||||||||    
T  7161233 ttaggcttaatgatatatttcgtccttgcaattaggcgtcatttaaaaattagtccctataatcactaatcctgacaatttacccttgcattgtttaatc 7161134  T
Q  223 attt 226  Q
    ||||    
T  7161133 attt 7161130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 124 - 226
Target Start/End: Original strand, 15913546 - 15913648
Alignment:
Q  124 taggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatca 223  Q
    |||| |||||||||||||||||  ||||||||||||||||||||||||||| ||| |||||| | |||| |||| |||||||||||| ||||||||||||    
T  15913546 taggtttaatgatgtgtttcgttattgcaattaggcgtcatttaaaaattagtctttgtaattgctaattctggtaatttacccttgcattgtttaatca 15913645  T
Q  224 ttt 226  Q
    |||    
T  15913646 ttt 15913648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 124 - 226
Target Start/End: Original strand, 32593488 - 32593590
Alignment:
Q  124 taggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatca 223  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||||||| || || |||||| |||||||| ||||||||||||| |||  |||||||    
T  32593488 taggcttaatgatgtgtttagtcctttcaattaggcgtcatttaaaaattagtccctataatcgctaatcctgacaatttacccttgcatttgttaatca 32593587  T
Q  224 ttt 226  Q
    |||    
T  32593588 ttt 32593590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 129 - 226
Target Start/End: Complemental strand, 7905666 - 7905569
Alignment:
Q  129 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||||||||||||||||||||||||||||| |||||||| |||||  || || |||||| |||| ||||||||||||||||| |||||||||||||||    
T  7905666 ttaatgatgtgtttcgtccttgcaattaggtgtcatttataaatttgtccctataatcgctaattctggcaatttacccttgcattgtttaatcattt 7905569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 123 - 226
Target Start/End: Complemental strand, 15913977 - 15913874
Alignment:
Q  123 ttaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatc 222  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||||||  ||  | |||||||||||| ||| || |||||| |||||||||||||     
T  15913977 ttaggcttaatgatgtgtttcgtccttgcaattaagggtcatttaaaaatttgtccatataatcgttaatcttggaaaattacccctgtattgtttaata 15913878  T
Q  223 attt 226  Q
    ||||    
T  15913877 attt 15913874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 121 - 226
Target Start/End: Original strand, 12065215 - 12065320
Alignment:
Q  121 aattaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattg-ttta 219  Q
    ||||||| ||||||||| ||||| || |||||||||||| |||||||||||||| ||  |||||||| |||| |||||||||||||||||||||| ||||    
T  12065215 aattaggtttaatgatgcgtttcatctttgcaattaggcatcatttaaaaattagtc-atgtaatcgctaattctggcaatttacccttgtattgtttta 12065313  T
Q  220 atcattt 226  Q
    |||||||    
T  12065314 atcattt 12065320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 135 - 226
Target Start/End: Original strand, 30803870 - 30803961
Alignment:
Q  135 atgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||| |||| ||||||||| |||| ||| ||||||||||  ||| ||||||||||||||||||||||||||||||  |||||||||||||||    
T  30803870 atgtatttcatccttgcaactaggtgtcgtttaaaaattgatctatgtaatcgttaatcctggcaatttacccttacattgtttaatcattt 30803961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 12080650 - 12080736
Alignment:
Q  140 tttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||| |||||||||||||| ||| |||||||||| ||| ||||||||| ||||| ||||||||||||| || |||||||||||||||    
T  12080650 tttcatccttgcaattaggggtcgtttaaaaattgctccctgtaatcgctaatcatggcaatttacccctgcattgtttaatcattt 12080736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 120 - 210
Target Start/End: Complemental strand, 14197018 - 14196928
Alignment:
Q  120 aaattaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttg 210  Q
    |||||| ||||||||||||| || ||||||||||||||||||| ||||||||||  || ||||||| | |||||||||||||||| |||||    
T  14197018 aaattaagcttaatgatgtgattagtccttgcaattaggcgtcgtttaaaaattcgtccctgtaattgctaatcctggcaatttagccttg 14196928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 124 - 226
Target Start/End: Original strand, 30337447 - 30337549
Alignment:
Q  124 taggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatca 223  Q
    |||||||||  |||| |||  |||||||||||||| ||| ||||||||||  || ||||||||| |||||||||||||||||||||| |||| |||||||    
T  30337447 taggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattggttaatca 30337546  T
Q  224 ttt 226  Q
    |||    
T  30337547 ttt 30337549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 125 - 226
Target Start/End: Complemental strand, 21628142 - 21628041
Alignment:
Q  125 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcat 224  Q
    ||||||||  |||| |||| |||||||||||||| |||  |||||||||  || ||||||||| |||||||| ||||||||||||| |||||||||||||    
T  21628142 aggcttaaatatgtatttcatccttgcaattaggggtcgcttaaaaattggtccctgtaatcgctaatcctgacaatttacccttgcattgtttaatcat 21628043  T
Q  225 tt 226  Q
    ||    
T  21628042 tt 21628041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 125 - 204
Target Start/End: Original strand, 14196614 - 14196693
Alignment:
Q  125 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaattta 204  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||  || ||||||| | |||| |||||||||||    
T  14196614 aggcttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaattctggcaattta 14196693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 123 - 210
Target Start/End: Original strand, 25485950 - 25486037
Alignment:
Q  123 ttaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttg 210  Q
    ||||| ||||||||||| || ||||||||||||| ||||||||||||||||  || ||||||| | |||||||||||||||| |||||    
T  25485950 ttaggtttaatgatgtgattagtccttgcaattaagcgtcatttaaaaattcgtccctgtaattgctaatcctggcaatttagccttg 25486037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 135 - 226
Target Start/End: Original strand, 33517543 - 33517634
Alignment:
Q  135 atgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||| |||| |||||| |||||||  || ||||||||||  || ||||||||| |||||||||||||||||||||| |||||||||||||||    
T  33517543 atgtatttcatccttgtaattagggatcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcattt 33517634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 126 - 226
Target Start/End: Original strand, 30725760 - 30725859
Alignment:
Q  126 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcatt 225  Q
    |||||||  |||| |||| | |||||||||||| ||| ||||||||||  |||||||||||| |||||||| ||||||||||||| | ||||||||||||    
T  30725760 ggcttaaatatgtatttcattcttgcaattagg-gtcgtttaaaaattggtctctgtaatcgctaatcctgccaatttacccttgcactgtttaatcatt 30725858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 125 - 204
Target Start/End: Original strand, 362869 - 362948
Alignment:
Q  125 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaattta 204  Q
    ||||||| |||||||||| | ||||||||||||||| ||||||||||||  || ||||||| ||||||||||||| ||||    
T  362869 aggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgttaatcctggcatttta 362948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 149 - 226
Target Start/End: Original strand, 8089466 - 8089543
Alignment:
Q  149 tgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||||||||| ||| ||||||||||  || || |||||||||||||| |||| ||||||||| |||||||||||||||    
T  8089466 tgcaattaggggtcgtttaaaaattggtccctataatcgttaatccttgcaaattacccttgcattgtttaatcattt 8089543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 125 - 210
Target Start/End: Complemental strand, 28000783 - 28000698
Alignment:
Q  125 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttg 210  Q
    ||||||| |||| ||||| | ||||||||||||||| ||||||||||||  |||||||||| | |||| ||||||||||| |||||    
T  28000783 aggcttattgatctgtttagcccttgcaattaggcggcatttaaaaatttgtctctgtaattgctaattctggcaatttagccttg 28000698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 138 - 226
Target Start/End: Original strand, 24210543 - 24210631
Alignment:
Q  138 tgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||||||||| || ||||||| ||||||||||||||  |||||||||| ||||||| | |||| ||||||||| |  ||||||||||||    
T  24210543 tgtttcgtccctgtaattaggggtcatttaaaaattggtctctgtaattgttaatcatagcaaattacccttgcaaagtttaatcattt 24210631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 121 - 204
Target Start/End: Complemental strand, 363232 - 363149
Alignment:
Q  121 aattaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaattta 204  Q
    |||| |||||| |||||||||| | ||||||||||||||| ||||||||||||  || ||||||| | ||||||||||| ||||    
T  363232 aatttggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 363149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 6640104 - 6639997
Alignment:
Q  14 atatcacgcccagtgtttgaaataaaattttgaaaactcagacagacttgaaggattgagttgatataacaggcagtttgaattttttctcattttctca 113  Q
    ||||| ||||||||| || |||   |||||||||||||||| ||||||||||||||| |||| || |||||| ||| ||||||| |||||   |||||||    
T  6640104 atatctcgcccagtggtttaaactgaattttgaaaactcagtcagacttgaaggatttagtttatgtaacagtcagcttgaattctttcttgctttctca 6640005  T
Q  114 tactaaaa 121  Q
    ||| ||||    
T  6640004 taccaaaa 6639997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 123 - 226
Target Start/End: Original strand, 26463176 - 26463279
Alignment:
Q  123 ttaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatc 222  Q
    ||||||||||  |||| |||  ||| |||||||||| ||| ||||||||||  || ||||| |||||||||||||||| ||||||||| |  ||||||||    
T  26463176 ttaggcttaaatatgtatttgatccctgcaattaggggtcgtttaaaaattggtccctgtattcgttaatcctggcaaattacccttgcaaagtttaatc 26463275  T
Q  223 attt 226  Q
    ||||    
T  26463276 attt 26463279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 210
Target Start/End: Complemental strand, 141159 - 141084
Alignment:
Q  135 atgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttg 210  Q
    |||||||||||||||||||||||  || |||||||||||  |  ||||||||||||||||| |||| |||| ||||    
T  141159 atgtgtttcgtccttgcaattagatgttatttaaaaatttgttcctgtaatcgttaatccttgcaaattactcttg 141084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 210
Target Start/End: Complemental strand, 149180 - 149105
Alignment:
Q  135 atgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttg 210  Q
    |||||||||||||||||||||||  || |||||||||||  |  ||||||||||||||||| |||| |||| ||||    
T  149180 atgtgtttcgtccttgcaattagatgttatttaaaaatttgttcctgtaatcgttaatccttgcaaattactcttg 149105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 226
Target Start/End: Original strand, 3059266 - 3059357
Alignment:
Q  135 atgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||| |||| |||||||||||| | ||| |||||||  |  ||  |||||||| ||||||| |||||||||||||| |||||||||||||||    
T  3059266 atgtatttcatccttgcaattaagggtcgtttaaaatattgtccatgtaatcgctaatcctagcaatttacccttgcattgtttaatcattt 3059357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 125 - 204
Target Start/End: Complemental strand, 22373086 - 22373007
Alignment:
Q  125 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaattta 204  Q
    ||||||| |||||| ||| | ||||||||||||||| ||||||||||||  || ||||||| | ||||||||||| ||||    
T  22373086 aggcttattgatgttttttgcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 22373007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 200
Target Start/End: Complemental strand, 33647388 - 33647305
Alignment:
Q  117 taaaaattaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaa 200  Q
    ||||||||||||||||  |||| |||| |||||||||||||| ||| ||||||||||  || ||||| ||| ||||||| ||||    
T  33647388 taaaaattaggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaa 33647305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 160 - 226
Target Start/End: Complemental strand, 10781550 - 10781484
Alignment:
Q  160 gtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||||||||||||||  |  ||||||||||||||||| ||||||| ||||| |||||||||| ||||    
T  10781550 gtcatttaaaaattagccattgtaatcgttaatcctgacaatttatccttgcattgtttaattattt 10781484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 226
Target Start/End: Complemental strand, 17734572 - 17734491
Alignment:
Q  145 tccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    ||||| |||||| | ||| ||||||||||  ||  |||||||| |||||||  ||||||||||||| |||||||||||||||    
T  17734572 tccttacaattatgggtcgtttaaaaattgatccatgtaatcgctaatcctatcaatttacccttgcattgtttaatcattt 17734491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 210
Target Start/End: Complemental strand, 25486324 - 25486239
Alignment:
Q  125 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttg 210  Q
    |||||||||||| || || |||||||||| || ||||| ||||||||||  || ||||||| | |||||| ||||||||| |||||    
T  25486324 aggcttaatgatatggttagtccttgcaactaagcgtcgtttaaaaattcgtccctgtaattgctaatcccggcaatttagccttg 25486239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 135 - 200
Target Start/End: Complemental strand, 28498444 - 28498379
Alignment:
Q  135 atgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaa 200  Q
    ||||||||||||| ||||||||||  |||||||||||||  ||  |||||||| ||||||||||||    
T  28498444 atgtgtttcgtccctgcaattagggctcatttaaaaattggtccttgtaatcgctaatcctggcaa 28498379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 208
Target Start/End: Complemental strand, 26464636 - 26464545
Alignment:
Q  117 taaaaattaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttaccct 208  Q
    |||||||  |||||||  |||| |||| ||| |||||||||| |||||||||||| |  || ||||| | ||||||||||||||||| ||||    
T  26464636 taaaaatatggcttaaatatgtatttcatccctgcaattaggggtcatttaaaaaatggtccctgtatttgttaatcctggcaattttccct 26464545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 200
Target Start/End: Complemental strand, 30337827 - 30337772
Alignment:
Q  145 tccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaa 200  Q
    |||||||||||||| ||||||||||||||  || ||||||||| ||||||| ||||    
T  30337827 tccttgcaattaggggtcatttaaaaattggtccctgtaatcgctaatccttgcaa 30337772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 173
Target Start/End: Original strand, 28000382 - 28000432
Alignment:
Q  123 ttaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaatt 173  Q
    ||||| ||| |||||||||| | ||||||||||||||| ||||||||||||    
T  28000382 ttaggtttattgatgtgtttagcccttgcaattaggcggcatttaaaaatt 28000432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 33646977 - 33647063
Alignment:
Q  140 tttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||| ||||| |||||| | ||| |||||||| |  || ||||||||| ||||| || ||||||||||||| ||| |||||||||||    
T  33646977 tttcatccttacaattaagggtcgtttaaaaagtgatccctgtaatcgctaatcttgccaatttacccttgcattatttaatcattt 33647063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 200
Target Start/End: Complemental strand, 12081067 - 12080990
Alignment:
Q  123 ttaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaa 200  Q
    ||||||||||  |||| |||| |||||||||||||| ||| ||||||||||  || ||||| ||| ||||||| ||||    
T  12081067 ttaggcttaaatatgtatttcatccttgcaattaggagtcgtttaaaaatttgtccctgtattcgctaatccttgcaa 12080990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 200
Target Start/End: Complemental strand, 30726194 - 30726113
Alignment:
Q  119 aaaattaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaa 200  Q
    |||| |||||||||  |||| |||| |||||||||||||| ||| ||||||||||  || ||||| ||| ||||||| ||||    
T  30726194 aaaaataggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaa 30726113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 200
Target Start/End: Complemental strand, 681158 - 681082
Alignment:
Q  124 taggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaa 200  Q
    |||||||||  |||| |||  |||||||||||||| ||| ||||||||||  |||||||| ||| ||||||| ||||    
T  681158 taggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtctctgtattcgctaatccttgcaa 681082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 11392866 - 11392938
Alignment:
Q  154 ttaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    ||||| ||| ||||||||||  ||  |||||||| |||||||   |||||||||||| |||||||||||||||    
T  11392866 ttaggagtcgtttaaaaattggtccttgtaatcgctaatcctaataatttacccttgcattgtttaatcattt 11392938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 226
Target Start/End: Original strand, 15115339 - 15115439
Alignment:
Q  126 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcatt 225  Q
    |||||||  |||| |||| |||||||||||||   || ||||||||||  || || |||||||||||||| |||| ||| ||||| |  |||||||||||    
T  15115339 ggcttaaatatgtatttcatccttgcaattagagatcgtttaaaaattggtccctataatcgttaatccttgcaaattagccttgcaaagtttaatcatt 15115438  T
Q  226 t 226  Q
    |    
T  15115439 t 15115439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 82; Significance: 8e-39; HSPs: 73)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 125 - 226
Target Start/End: Complemental strand, 37778700 - 37778599
Alignment:
Q  125 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcat 224  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| | |||||||||||||||||||||| |||||||||||||    
T  37778700 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaattgctaatcctggcaatttacccttgcattgtttaatcat 37778601  T
Q  225 tt 226  Q
    ||    
T  37778600 tt 37778599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 123 - 226
Target Start/End: Complemental strand, 3469629 - 3469526
Alignment:
Q  123 ttaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatc 222  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||| |  ||||||||| |||||||||||||||||||||| |||||||||||    
T  3469629 ttaggcttaatgatctgtttcgtccttgcaattaggcgtcatttaaaaattagttcctgtaatcgctaatcctggcaatttacccttgcattgtttaatc 3469530  T
Q  223 attt 226  Q
    ||||    
T  3469529 attt 3469526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 125 - 226
Target Start/End: Complemental strand, 29118965 - 29118864
Alignment:
Q  125 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcat 224  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| |||||||||||||||||| ||| |||||||||||||    
T  29118965 aggcataatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtcactgtaatcgctaatcctggcaatttaccattgcattgtttaatcat 29118866  T
Q  225 tt 226  Q
    ||    
T  29118865 tt 29118864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 129 - 226
Target Start/End: Complemental strand, 32306847 - 32306750
Alignment:
Q  129 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||| |||||||||||||||||||||| |||||||||||||||    
T  32306847 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgctaatcctggcaatttacccttgcattgtttaatcattt 32306750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 125 - 222
Target Start/End: Complemental strand, 40788847 - 40788750
Alignment:
Q  125 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatc 222  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||||||||||||||||| |||| |||||||||||    
T  40788847 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttactcttgcattgtttaatc 40788750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 125 - 226
Target Start/End: Complemental strand, 52032566 - 52032465
Alignment:
Q  125 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcat 224  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| || ||||||||| ||||||||||||| |||||||| |||||||||||||    
T  52032566 aggcttaatgatgtgtttcgtccttgcaattagacgtcatttaaaaattagtccctgtaatcgctaatcctggcaatatacccttgcattgtttaatcat 52032467  T
Q  225 tt 226  Q
    ||    
T  52032466 tt 52032465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 126 - 226
Target Start/End: Original strand, 10294567 - 10294667
Alignment:
Q  126 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcatt 225  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| | ||||| || ||||||||||||||||||||||||||||    
T  10294567 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaattgctaatcatgacaatttacccttgtattgtttaatcatt 10294666  T
Q  226 t 226  Q
    |    
T  10294667 t 10294667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 123 - 226
Target Start/End: Original strand, 11910696 - 11910799
Alignment:
Q  123 ttaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatc 222  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||||| || ||||||||| ||||||| |||||||||||||| |||||||||||    
T  11910696 ttagtcttaatgatgtgtttcgtccttgcaattagacgtcatttaaaaattaatccctgtaatcgctaatcctagcaatttacccttgcattgtttaatc 11910795  T
Q  223 attt 226  Q
    ||||    
T  11910796 attt 11910799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 123 - 226
Target Start/End: Original strand, 13948777 - 13948880
Alignment:
Q  123 ttaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatc 222  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||  |||||||| ||||| |||||||||||||||| |||||||||||    
T  13948777 ttaggcttaatgatgtgtttcgtccttgcaattaggcatcatttaaaaattagtccatgtaatcgctaatcttggcaatttacccttgcattgtttaatc 13948876  T
Q  223 attt 226  Q
    ||||    
T  13948877 attt 13948880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 124 - 226
Target Start/End: Complemental strand, 33156424 - 33156322
Alignment:
Q  124 taggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatca 223  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||||||||| |||||||||||||||  ||||||||||||    
T  33156424 taggtttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtcattgtaatcgttaatcttggcaatttaccctttcattgtttaatca 33156325  T
Q  224 ttt 226  Q
    |||    
T  33156324 ttt 33156322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 120 - 226
Target Start/End: Original strand, 52032132 - 52032238
Alignment:
Q  120 aaattaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgttta 219  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||||||||| ||  |||||||| ||||||| |||||||||||||| ||||||||    
T  52032132 aaattaggtttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattaatccttgtaatcgctaatcctagcaatttacccttgcattgttta 52032231  T
Q  220 atcattt 226  Q
    |||||||    
T  52032232 atcattt 52032238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 125 - 226
Target Start/End: Original strand, 3469199 - 3469300
Alignment:
Q  125 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcat 224  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||| ||  |||||||  |||||||||||||||||||||| |||||||||||||    
T  3469199 aggcttaatgatgtgtttcgtctttgcaattaggcgtcatttaaaaattagtccatgtaatcactaatcctggcaatttacccttgcattgtttaatcat 3469298  T
Q  225 tt 226  Q
    ||    
T  3469299 tt 3469300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 125 - 226
Target Start/End: Original strand, 47551492 - 47551593
Alignment:
Q  125 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcat 224  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||| || ||||||||| |||| ||||||||||||||||| |||||||||||||    
T  47551492 aggcttaatgatgtgtttcgtccttgcaattagatgtcatttaaaaattagtccctgtaatcgctaatactggcaatttacccttgcattgtttaatcat 47551591  T
Q  225 tt 226  Q
    ||    
T  47551592 tt 47551593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 128 - 226
Target Start/End: Original strand, 29685943 - 29686041
Alignment:
Q  128 cttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||| |||||||| ||||||| ||||| |||||||||||||||    
T  29685943 cttaatgatgtatttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctgacaatttatccttgcattgtttaatcattt 29686041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 128 - 226
Target Start/End: Complemental strand, 29686364 - 29686266
Alignment:
Q  128 cttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| ||  |||||||  |||||||||||||||||||||| |||||||||||||||    
T  29686364 cttaatgatgtgtttcgtccttgcaattaggcgtcattttaaaattagtcattgtaatcactaatcctggcaatttacccttgcattgtttaatcattt 29686266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 125 - 226
Target Start/End: Original strand, 32306423 - 32306524
Alignment:
Q  125 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcat 224  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |   |||||||| ||||| || ||||||||||||| |||||||||||||    
T  32306423 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagttcatgtaatcgctaatcttgacaatttacccttgcattgtttaatcat 32306522  T
Q  225 tt 226  Q
    ||    
T  32306523 tt 32306524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 125 - 226
Target Start/End: Complemental strand, 33506377 - 33506276
Alignment:
Q  125 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcat 224  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||||| || ||||||||| ||||||||||||||||| |||  |||||||||||||    
T  33506377 aggcttaatgatgtgtttcgtcctttcaattaggcgttatttaaaaattagtccctgtaatcgctaatcctggcaatttactcttacattgtttaatcat 33506278  T
Q  225 tt 226  Q
    ||    
T  33506277 tt 33506276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 123 - 226
Target Start/End: Original strand, 41421969 - 41422072
Alignment:
Q  123 ttaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatc 222  Q
    ||||| ||||||||||||||||||||||||||||||||||| |||||||||| |  ||||||||||||||| || ||||||||||||  |||||||||||    
T  41421969 ttaggtttaatgatgtgtttcgtccttgcaattaggcgtcagttaaaaattagttcctgtaatcgttaatcttgacaatttacccttacattgtttaatc 41422068  T
Q  223 attt 226  Q
    ||||    
T  41422069 attt 41422072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 35643865 - 35643951
Alignment:
Q  140 tttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    ||||||||||||||||||||||||||||||||||| || ||||||||| ||||||||||||||||||| || |||||||||||||||    
T  35643865 tttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccgtgcattgtttaatcattt 35643951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 125 - 226
Target Start/End: Complemental strand, 10294986 - 10294885
Alignment:
Q  125 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcat 224  Q
    |||||||||||||||||||||||||||||| || ||| |||||||||||| |  ||||||||| ||||||| |||||||||||||| |||||||||||||    
T  10294986 aggcttaatgatgtgtttcgtccttgcaatcagacgtaatttaaaaattagttcctgtaatcgctaatcctcgcaatttacccttgcattgtttaatcat 10294887  T
Q  225 tt 226  Q
    ||    
T  10294886 tt 10294885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 128 - 216
Target Start/End: Original strand, 29118529 - 29118617
Alignment:
Q  128 cttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgt 216  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||| |||| ||||||||||||||||| |||||    
T  29118529 cttaatgatgtgtttcgtccttgcaattatgcgtcatttaaaaattagtccctgtaatcgctaattctggcaatttacccttgcattgt 29118617  T

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Target: chr3; HSP #22
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 129 - 226
Target Start/End: Original strand, 3596112 - 3596209
Alignment:
Q  129 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| ||  |||||||| |||||||| ||||||||| ||| ||| |||||||||||    
T  3596112 ttaatgatgtgtttcgtccttgcaattaggcgtgatttaaaaattagtcaatgtaatcgctaatcctgacaatttacctttgcattatttaatcattt 3596209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 124 - 226
Target Start/End: Original strand, 2796177 - 2796279
Alignment:
Q  124 taggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatca 223  Q
    |||||||||  |||| |||  |||||||||||||| ||||||||||||||  || ||||||||| |||||||||||||||||||||| ||||||||||||    
T  2796177 taggcttaaatatgtatttgatccttgcaattaggggtcatttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatca 2796276  T
Q  224 ttt 226  Q
    |||    
T  2796277 ttt 2796279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 121 - 210
Target Start/End: Complemental strand, 48322779 - 48322690
Alignment:
Q  121 aattaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttg 210  Q
    ||||||||||||||||||| || ||||||||||||||||||| ||||||||||  || ||||||| |||||||||||||||||| |||||    
T  48322779 aattaggcttaatgatgtgattagtccttgcaattaggcgtcgtttaaaaattcgtccctgtaattgttaatcctggcaatttagccttg 48322690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 123 - 226
Target Start/End: Complemental strand, 23458410 - 23458307
Alignment:
Q  123 ttaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatc 222  Q
    ||||||||||  |||| |||| |||||||||||| | ||| ||||||||||  |||||||||||| ||||||| |||||||||||||| |||||||||||    
T  23458410 ttaggcttaaatatgtatttcatccttgcaattatgggtcgtttaaaaattggtctctgtaatcgctaatccttgcaatttacccttgcattgtttaatc 23458311  T
Q  223 attt 226  Q
    ||||    
T  23458310 attt 23458307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 123 - 210
Target Start/End: Original strand, 36314295 - 36314382
Alignment:
Q  123 ttaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttg 210  Q
    ||||||||||||||||| || ||||||||||||||||||||||||||||||  || ||||||| | |||||||||||||||| |||||    
T  36314295 ttaggcttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaatcctggcaatttagccttg 36314382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 145 - 226
Target Start/End: Complemental strand, 19741301 - 19741220
Alignment:
Q  145 tccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||||||||||||| ||| ||||||||||  || ||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  19741301 tccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcttggcaatttacccttgtattgtttaatcattt 19741220  T

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Target: chr3; HSP #28
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 129 - 226
Target Start/End: Original strand, 43998148 - 43998245
Alignment:
Q  129 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    ||||||| ||||||| || ||| ||||| | ||||||||||||||| ||  ||||||||||||| ||||||||||||||||| |||||||||||||||    
T  43998148 ttaatgacgtgtttcatcattgtaattatgtgtcatttaaaaattagtccttgtaatcgttaattctggcaatttacccttgcattgtttaatcattt 43998245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 126 - 226
Target Start/End: Complemental strand, 9294386 - 9294286
Alignment:
Q  126 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcatt 225  Q
    |||||||  |||| |||| |||||||||||||| ||| ||||||||||  || || |||||| |||||||||||||||||||||| ||||||||||||||    
T  9294386 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctataatcgctaatcctggcaatttacccttgcattgtttaatcatt 9294287  T
Q  226 t 226  Q
    |    
T  9294286 t 9294286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 162 - 226
Target Start/End: Complemental strand, 10307765 - 10307701
Alignment:
Q  162 catttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    ||||||||||||| |||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  10307765 catttaaaaattagtctctgtaatcgctaatcctggcaatttacccttgcattgtttaatcattt 10307701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 126 - 226
Target Start/End: Original strand, 33154877 - 33154977
Alignment:
Q  126 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcatt 225  Q
    |||||||  ||||||||||||| |||||||||| ||||||||||||||  || |||||||||||||||||| ||| ||| |||||||  |||||||||||    
T  33154877 ggcttaagtatgtgtttcgtccatgcaattaggggtcatttaaaaattggtccctgtaatcgttaatcctgacaaattatccttgtaaagtttaatcatt 33154976  T
Q  226 t 226  Q
    |    
T  33154977 t 33154977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 126 - 210
Target Start/End: Complemental strand, 36314695 - 36314611
Alignment:
Q  126 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttg 210  Q
    |||||||||||||| || ||||||||||||||||||| ||||||||||  || ||||||| |||||||||||||||||| |||||    
T  36314695 ggcttaatgatgtgattagtccttgcaattaggcgtcgtttaaaaattcgtccctgtaattgttaatcctggcaatttagccttg 36314611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 123 - 226
Target Start/End: Original strand, 4322589 - 4322691
Alignment:
Q  123 ttaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatc 222  Q
    |||||||||||||||||||||  || |||||||||||||| ||||||||||  || ||||||||| |||||||| ||| ||| ||||| |||||||||||    
T  4322589 ttaggcttaatgatgtgtttcacccctgcaattaggcgtcgtttaaaaattcgtc-ctgtaatcgctaatcctgacaaattaaccttgcattgtttaatc 4322687  T
Q  223 attt 226  Q
    ||||    
T  4322688 attt 4322691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 123 - 210
Target Start/End: Original strand, 10770487 - 10770574
Alignment:
Q  123 ttaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttg 210  Q
    ||||| ||||||||||| || ||||||||||||||||||||||||||||||  || ||||||| | |||||||||||||||| |||||    
T  10770487 ttaggtttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaatcctggcaatttagccttg 10770574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 124 - 210
Target Start/End: Complemental strand, 10770890 - 10770804
Alignment:
Q  124 taggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttg 210  Q
    |||| ||||||||||| || |||||| |||||||||||||||||||||||  || ||||||| |||||||||||||||||| |||||    
T  10770890 taggtttaatgatgtgattagtccttacaattaggcgtcatttaaaaattcgtccctgtaattgttaatcctggcaatttagccttg 10770804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 124 - 226
Target Start/End: Complemental strand, 40033886 - 40033784
Alignment:
Q  124 taggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatca 223  Q
    |||||||||  |||| |||| |||||||||||||| ||| ||||||||||  | ||| |||| | |||||||||||||||||||||| ||||||||||||    
T  40033886 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtttctataattgctaatcctggcaatttacccttgcattgtttaatca 40033787  T
Q  224 ttt 226  Q
    |||    
T  40033786 ttt 40033784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 124 - 226
Target Start/End: Original strand, 40788418 - 40788520
Alignment:
Q  124 taggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatca 223  Q
    |||| ||||||||||||||| |||||||||||| |||| |||||||||||| || || |||||| |||| ||| ||||||||| ||| ||| ||||||||    
T  40788418 tagggttaatgatgtgtttcttccttgcaattaagcgttatttaaaaattagtccctctaatcgctaattctgacaatttacctttgcattatttaatca 40788517  T
Q  224 ttt 226  Q
    |||    
T  40788518 ttt 40788520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 129 - 226
Target Start/End: Complemental strand, 4323627 - 4323530
Alignment:
Q  129 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||| ||||||||||  || |||||||||||||| ||||||||||  || ||||||||| |||||||||||| ||| ||||| |||||||||||||||    
T  4323627 ttaaggatgtgtttcacccctgcaattaggcgtcgtttaaaaattcgtccctgtaatcgctaatcctggcaaattaaccttgcattgtttaatcattt 4323530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 117 - 174
Target Start/End: Complemental strand, 13949130 - 13949073
Alignment:
Q  117 taaaaattaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaatta 174  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  13949130 taaaattttggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaatta 13949073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 128 - 200
Target Start/End: Original strand, 33506180 - 33506252
Alignment:
Q  128 cttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaa 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |  || |||||| |||| |||||||    
T  33506180 cttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagttcctataatcgctaattctggcaa 33506252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 126 - 226
Target Start/End: Complemental strand, 42855733 - 42855633
Alignment:
Q  126 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcatt 225  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||| ||  |||| ||| ||||||| ||||  || ||||| ||| ||||||||||    
T  42855733 ggcttaatgatgtgtttagcccttgcaattaggcgtcatttaaaaattagtccatgtattcgctaatccttgcaaactagccttgcattctttaatcatt 42855634  T
Q  226 t 226  Q
    |    
T  42855633 t 42855633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 135 - 210
Target Start/End: Original strand, 6956257 - 6956332
Alignment:
Q  135 atgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttg 210  Q
    ||||||||||||| ||||||||||  |||||||||||||| || || ||||||||||||||||||| |||||||||    
T  6956257 atgtgtttcgtccctgcaattagggatcatttaaaaattagtccctataatcgttaatcctggcaaattacccttg 6956332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 135 - 226
Target Start/End: Original strand, 46474824 - 46474915
Alignment:
Q  135 atgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||| |||| || ||||||||||| ||| ||||||||||  |||||||||||| ||||| |||||||||||| ||| |||||||||||||||    
T  46474824 atgtatttcatctttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcttggcaatttaccattgcattgtttaatcattt 46474915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 124 - 210
Target Start/End: Original strand, 48322375 - 48322461
Alignment:
Q  124 taggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttg 210  Q
    |||||||||||||||| || |||||||||||||| | |||||||||||||  || ||||||| | |||||||||||||||| |||||    
T  48322375 taggcttaatgatgtgattagtccttgcaattagacatcatttaaaaattcgtccctgtaattgctaatcctggcaatttagccttg 48322461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 135 - 210
Target Start/End: Complemental strand, 1079640 - 1079565
Alignment:
Q  135 atgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttg 210  Q
    ||||||||| ||| |||||||||| ||||||||||||||  || |||||||||||||||||||||| ||| |||||    
T  1079640 atgtgtttcatccctgcaattaggggtcatttaaaaattggtccctgtaatcgttaatcctggcaaattagccttg 1079565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 135 - 226
Target Start/End: Complemental strand, 9368720 - 9368629
Alignment:
Q  135 atgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||| ||||||||||||||||||| ||| ||||||||||  || |||||||| |||||||| |||| |||| |||  |||||||||||||||    
T  9368720 atgtatttcgtccttgcaattaggggtcgtttaaaaattggtccctgtaatcattaatccttgcaaattactcttacattgtttaatcattt 9368629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 123 - 226
Target Start/End: Complemental strand, 33689810 - 33689707
Alignment:
Q  123 ttaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatc 222  Q
    ||||||||||  |||| |||| || ||||||||||| ||| ||||||||||  |   |||||||| |||||||||||||||||||||| ||| |||||||    
T  33689810 ttaggcttaaatatgtatttcatctttgcaattaggggtcgtttaaaaattggttcatgtaatcgctaatcctggcaatttacccttgcattatttaatc 33689711  T
Q  223 attt 226  Q
    ||||    
T  33689710 attt 33689707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 124 - 226
Target Start/End: Original strand, 42342789 - 42342891
Alignment:
Q  124 taggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatca 223  Q
    |||||||||  |||| |||| ||||| |||||||| ||| ||||||||||  ||  |||||| | || ||||||||||||||||||| ||||||||||||    
T  42342789 taggcttaaatatgtatttcatccttacaattaggggtcgtttaaaaattggtccatgtaattgctagtcctggcaatttacccttgcattgtttaatca 42342888  T
Q  224 ttt 226  Q
    |||    
T  42342889 ttt 42342891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 123 - 204
Target Start/End: Original strand, 8041613 - 8041694
Alignment:
Q  123 ttaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaattta 204  Q
    ||||||||| |||||||||| | ||||||||||||||| ||||||||||||  || ||||||| | ||||||||||| ||||    
T  8041613 ttaggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 8041694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 135 - 200
Target Start/End: Original strand, 43607789 - 43607854
Alignment:
Q  135 atgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaa 200  Q
    ||||||||||||| |||||||| ||||||||||||||||  || ||||||||||||||||| ||||    
T  43607789 atgtgtttcgtccctgcaattaagcgtcatttaaaaattggtccctgtaatcgttaatccttgcaa 43607854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 123 - 204
Target Start/End: Original strand, 54466420 - 54466501
Alignment:
Q  123 ttaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaattta 204  Q
    ||||| ||| |||||||||| | ||||||||||||||| ||||||||||||  || ||||||| ||||||||||||| ||||    
T  54466420 ttaggtttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgttaatcctggcatttta 54466501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 135 - 226
Target Start/End: Original strand, 1078546 - 1078636
Alignment:
Q  135 atgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||| |||||||| |||||||||| ||||||||||||||  || |||||||||||||| |||| || ||| |||||||  ||||||||||||    
T  1078546 atgtttttcgtccatgcaattaggggtcatttaaaaattggtccctgtaatcgttaat-ctggtaaattaaccttgtaaagtttaatcattt 1078636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 139 - 194
Target Start/End: Complemental strand, 3596486 - 3596432
Alignment:
Q  139 gtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcc 194  Q
    ||||||||||||||||||||||| |||||||||||| ||| |||||||||||||||    
T  3596486 gtttcgtccttgcaattaggcgtgatttaaaaattagtct-tgtaatcgttaatcc 3596432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 135 - 210
Target Start/End: Complemental strand, 21186114 - 21186039
Alignment:
Q  135 atgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttg 210  Q
    |||||||| |||| |||||||||| ||||||||||||||  |   ||||||||||||||||||||| |||||||||    
T  21186114 atgtgttttgtccatgcaattaggggtcatttaaaaattggtacatgtaatcgttaatcctggcaaattacccttg 21186039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 125 - 200
Target Start/End: Original strand, 25107212 - 25107287
Alignment:
Q  125 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaa 200  Q
    ||||||||  ||||||||| ||| |||||||||| ||||||||||||||  ||||| |||||| ||||||||||||    
T  25107212 aggcttaagtatgtgtttcatccctgcaattaggggtcatttaaaaattggtctctctaatcgctaatcctggcaa 25107287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 135 - 226
Target Start/End: Original strand, 47856396 - 47856487
Alignment:
Q  135 atgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    ||||||||||||| |||||||| ||||| ||||||||||  ||  ||||||||||||||||| ||| |||| |||| |  ||||||||||||    
T  47856396 atgtgtttcgtccctgcaattaagcgtcgtttaaaaattggtccttgtaatcgttaatcctgacaaattactcttgcaaagtttaatcattt 47856487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 43384321 - 43384383
Alignment:
Q  164 tttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    ||||||||||  || ||||||||| |||||||| ||||||||||||| |||||||||||||||    
T  43384321 tttaaaaattggtccctgtaatcgctaatcctgacaatttacccttgcattgtttaatcattt 43384383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 43608896 - 43608810
Alignment:
Q  140 tttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||||||| ||||||||||  |||||||||||||  |||||||||||||||||||| | || ||| ||||| |  ||||||||||||    
T  43608896 tttcgtccctgcaattagggatcatttaaaaattggtctctgtaatcgttaatcctcgtaaattaaccttgcaaagtttaatcattt 43608810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 226
Target Start/End: Complemental strand, 51994295 - 51994214
Alignment:
Q  145 tccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    ||||||||||||||  || ||||||||||  ||  |||||||| |||| |||||||||||||| || |||||||||||||||    
T  51994295 tccttgcaattagggatcgtttaaaaattggtccttgtaatcgctaattctggcaatttacccctgcattgtttaatcattt 51994214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 135 - 207
Target Start/End: Complemental strand, 23276402 - 23276330
Alignment:
Q  135 atgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttaccc 207  Q
    ||||||||| ||| |||||||||| ||||||||||||||  || ||||||||| |||||| ||||| ||||||    
T  23276402 atgtgtttcatccctgcaattaggggtcatttaaaaattggtccctgtaatcgctaatcccggcaaattaccc 23276330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 135 - 226
Target Start/End: Complemental strand, 40506207 - 40506115
Alignment:
Q  135 atgtgtttcgtccttgcaatta-ggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||| |||| |||||||||||| || ||||||||||| ||  |  |||||||||||||||||| ||||||||||||  ||| |||||||||||    
T  40506207 atgtatttcatccttgcaattatggggtcatttaaaagttggttcctgtaatcgttaatcctgacaatttacccttacattatttaatcattt 40506115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 226
Target Start/End: Complemental strand, 47857664 - 47857573
Alignment:
Q  135 atgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    ||||||||||||| || ||||||| ||| ||||||||||  ||| ||||||||||||| |||| || ||| ||||| |  ||||||||||||    
T  47857664 atgtgtttcgtccctgtaattaggtgtcgtttaaaaattgatctttgtaatcgttaattctggtaaattatccttgcaaagtttaatcattt 47857573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 226
Target Start/End: Original strand, 53756753 - 53756844
Alignment:
Q  135 atgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||| |||| || ||||||||||| ||| ||||||||||  |   |||||||||||||| | | |||||||||||| |||||||||||||||    
T  53756753 atgtatttcatctttgcaattaggggtcgtttaaaaattgattcatgtaatcgttaatcttagtaatttacccttgcattgtttaatcattt 53756844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 204
Target Start/End: Complemental strand, 54466813 - 54466742
Alignment:
Q  133 tgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaattta 204  Q
    |||||||||| | ||||||||||||||| ||||||||||||  || ||||||| | ||||||||||| ||||    
T  54466813 tgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattggtaatcctggcatttta 54466742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 117 - 226
Target Start/End: Original strand, 40758138 - 40758244
Alignment:
Q  117 taaaaattaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgt 216  Q
    |||| ||| |||||||  |||| |||| |||||||||||||| ||| ||||||||||  ||  |||||||| ||||||| |||||||||||  | |||||    
T  40758138 taaacatttggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccatgtaatcgctaatcct-gcaatttaccc--gcattgt 40758234  T
Q  217 ttaatcattt 226  Q
    ||||||||||    
T  40758235 ttaatcattt 40758244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 126 - 204
Target Start/End: Original strand, 47921466 - 47921544
Alignment:
Q  126 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaattta 204  Q
    |||||| ||||||||||   ||||||||||||||| ||||||||||||  || ||||||| ||||||| ||||| ||||    
T  47921466 ggcttattgatgtgtttaacccttgcaattaggcggcatttaaaaattcgtccctgtaattgttaatcttggcatttta 47921544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 200
Target Start/End: Complemental strand, 40758541 - 40758464
Alignment:
Q  123 ttaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaa 200  Q
    ||||||||||  |||| |||| |||||||||||||| ||||||||||||||  ||| |||| ||| ||||||| ||||    
T  40758541 ttaggcttaaatatgtatttcatccttgcaattaggggtcatttaaaaattggtctatgtattcgctaatccttgcaa 40758464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 204
Target Start/End: Complemental strand, 8042015 - 8041935
Alignment:
Q  124 taggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaattta 204  Q
    |||| ||| |||||||||| | ||||||||||||||| |||||||| |||  || ||||||| | ||||||||||| ||||    
T  8042015 taggtttattgatgtgtttagcccttgcaattaggcggcatttaaatattcgtccctgtaattgctaatcctggcatttta 8041935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 210
Target Start/End: Complemental strand, 32431611 - 32431536
Alignment:
Q  135 atgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttg 210  Q
    |||| |||||||| || ||||||| ||||||||||||||  || ||| |||||||||||||| ||| ||| |||||    
T  32431611 atgtatttcgtccctgtaattaggggtcatttaaaaattggtccctgcaatcgttaatcctgacaaattagccttg 32431536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 226
Target Start/End: Complemental strand, 55052622 - 55052576
Alignment:
Q  180 tgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||||||||||||| ||||||||||||  || |||||||||||||||    
T  55052622 tgtaatcgttaatcatggcaatttacctctgcattgtttaatcattt 55052576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 135 - 200
Target Start/End: Complemental strand, 25108514 - 25108449
Alignment:
Q  135 atgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaa 200  Q
    ||||||||| ||| |||||||||| ||||||||||| ||  || ||||||| | ||||||||||||    
T  25108514 atgtgtttcatccctgcaattaggggtcatttaaaatttggtccctgtaattgctaatcctggcaa 25108449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 226
Target Start/End: Complemental strand, 26463954 - 26463926
Alignment:
Q  198 caatttacccttgtattgtttaatcattt 226  Q
    |||||||||||||||||||||||||||||    
T  26463954 caatttacccttgtattgtttaatcattt 26463926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 34142627 - 34142575
Alignment:
Q  145 tccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctgg 197  Q
    |||||||||||||| ||| ||||||||||  || |||||||||||||| ||||    
T  34142627 tccttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatactgg 34142575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0771 (Bit Score: 76; Significance: 3e-35; HSPs: 2)
Name: scaffold0771
Description:

Target: scaffold0771; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 123 - 226
Target Start/End: Original strand, 917 - 1020
Alignment:
Q  123 ttaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatc 222  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||  |||||||| ||||| |||||||||||||||| |||||||||||    
T  917 ttaggcttaatgatgtgtttcgtccttgcaattaggcatcatttaaaaattagtccatgtaatcgctaatcttggcaatttacccttgcattgtttaatc 1016  T
Q  223 attt 226  Q
    ||||    
T  1017 attt 1020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0771; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 117 - 174
Target Start/End: Complemental strand, 1270 - 1213
Alignment:
Q  117 taaaaattaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaatta 174  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  1270 taaaattttggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaatta 1213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 123 - 226
Target Start/End: Original strand, 2390 - 2493
Alignment:
Q  123 ttaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatc 222  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||||| || ||||||||| ||||||| |||||||||||||| |||||||||||    
T  2390 ttagtcttaatgatgtgtttcgtccttgcaattagacgtcatttaaaaattaatccctgtaatcgctaatcctagcaatttacccttgcattgtttaatc 2489  T
Q  223 attt 226  Q
    ||||    
T  2490 attt 2493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 76; Significance: 3e-35; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 123 - 226
Target Start/End: Complemental strand, 222218 - 222115
Alignment:
Q  123 ttaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatc 222  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |   |||||||| |||||||| ||||||||||||| |||||||||||    
T  222218 ttaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtacatgtaatcgctaatcctgacaatttacccttgcattgtttaatc 222119  T
Q  223 attt 226  Q
    ||||    
T  222118 attt 222115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 129 - 226
Target Start/End: Original strand, 221794 - 221890
Alignment:
Q  129 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||||||| |||||||||||||||    
T  221794 ttaatgatgtgtttcgttcttgcaattaggcgtcatttaaaaattagtct-tgtaatcgctaatcctggcaatttacccttgcattgtttaatcattt 221890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 128 - 226
Target Start/End: Complemental strand, 12204 - 12106
Alignment:
Q  128 cttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||||||||||||||||||||||||||||  |||||||||||||||| || | ||||||| ||||||| |||||||||||||| |||||||||||||||    
T  12204 cttaatgatgtgtttcgtccttgcaattaaacgtcatttaaaaattaatcccagtaatcgctaatcctagcaatttacccttgcattgtttaatcattt 12106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 125 - 226
Target Start/End: Complemental strand, 37992 - 37891
Alignment:
Q  125 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcat 224  Q
    ||||||||  |||| |||| |||||||||||||| ||| ||||||||||  ||| |||||||| |||||||| |||||||||||||||||||||||||||    
T  37992 aggcttaaatatgtatttcatccttgcaattaggagtcgtttaaaaattggtctttgtaatcgctaatcctgacaatttacccttgtattgtttaatcat 37893  T
Q  225 tt 226  Q
    ||    
T  37892 tt 37891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 126 - 226
Target Start/End: Original strand, 68965 - 69065
Alignment:
Q  126 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcatt 225  Q
    |||||||  |||| |||| |||||||||||||| ||||||||||||||  || ||||||||  |||||||||||||||||||||| ||||||||||||||    
T  68965 ggcttaaatatgtatttcatccttgcaattaggggtcatttaaaaattggtccctgtaatcactaatcctggcaatttacccttgcattgtttaatcatt 69064  T
Q  226 t 226  Q
    |    
T  69065 t 69065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 50; Significance: 9e-20; HSPs: 2)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 125 - 210
Target Start/End: Original strand, 21008 - 21093
Alignment:
Q  125 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttg 210  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||  || ||||||| | ||||||| |||||||| |||||    
T  21008 aggcttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaatccttgcaatttagccttg 21093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 126 - 204
Target Start/End: Complemental strand, 21366 - 21288
Alignment:
Q  126 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaattta 204  Q
    |||||||||||||| || ||||||||||||||  ||| ||||||||||  || ||||||| | ||||| ||||||||||    
T  21366 ggcttaatgatgtgattagtccttgcaattagaggtcgtttaaaaattcgtccctgtaattgctaatcatggcaattta 21288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 124 - 226
Target Start/End: Original strand, 1767 - 1869
Alignment:
Q  124 taggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatca 223  Q
    |||||||||  |||| |||  |||||||||||||| ||| || |||||||  || ||||||||| ||||| |||||||||||||||| ||||||||||||    
T  1767 taggcttaaatatgtatttgatccttgcaattaggggtcgttaaaaaattggtccctgtaatcgctaatcttggcaatttacccttgcattgtttaatca 1866  T
Q  224 ttt 226  Q
    |||    
T  1867 ttt 1869  T

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Target: scaffold0020 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 145 - 226
Target Start/End: Original strand, 139691 - 139772
Alignment:
Q  145 tccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||||||||||||| ||| ||||||||||  || ||||||||| ||||||||||||||||||| || |||| ||||||||||    
T  139691 tccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccatgaattgattaatcattt 139772  T

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Target: scaffold0008 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 135 - 226
Target Start/End: Complemental strand, 239970 - 239879
Alignment:
Q  135 atgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||||||||||||||||| ||||| ||||||||||||||  |  ||||||||| |||||||||||| ||||||||  |  ||||||||||||    
T  239970 atgtgtttcgtccttgcacttaggggtcatttaaaaattggttcctgtaatcgataatcctggcaaattacccttccaaagtttaatcattt 239879  T

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Target: scaffold0024 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 124 - 204
Target Start/End: Complemental strand, 141993 - 141913
Alignment:
Q  124 taggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaattta 204  Q
    |||||||| |||||||||| | ||||||||||||||| ||||||||||||  || ||||||| | ||||||||||| ||||    
T  141993 taggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcatccctgtaattgctaatcctggcatttta 141913  T

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Target: scaffold0024; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 204
Target Start/End: Original strand, 141592 - 141672
Alignment:
Q  124 taggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaattta 204  Q
    |||| ||| |||||||||| | |||||||||||| || ||||||||||||  || ||||||| | ||||||||||| ||||    
T  141592 taggtttattgatgtgtttagcccttgcaattagacggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 141672  T

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Target: scaffold0075 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 140 - 207
Target Start/End: Complemental strand, 14804 - 14737
Alignment:
Q  140 tttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttaccc 207  Q
    |||| |||||||||||||| ||| ||||||||||  ||||| |||||| |||||||||||||||||||    
T  14804 tttcatccttgcaattaggggtcgtttaaaaattggtctctctaatcgctaatcctggcaatttaccc 14737  T

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Target: scaffold0775 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0775
Description:

Target: scaffold0775; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 226
Target Start/End: Complemental strand, 6397 - 6306
Alignment:
Q  135 atgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    ||||||||| |||||| ||||||| |||| |||||||||  ||  | |||||| ||||||| |||| ||||||||| | |||||||||||||    
T  6397 atgtgtttcttccttgaaattaggggtcacttaaaaattggtccttataatcgataatccttgcaaattacccttgcaatgtttaatcattt 6306  T

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Target: scaffold0128 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 226
Target Start/End: Original strand, 19866 - 19957
Alignment:
Q  135 atgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctggcaatttacccttgtattgtttaatcattt 226  Q
    |||| ||||||||||||||||| | ||| ||||||||||  || |||| |||| ||||||| |||| ||||| ||| ||| |||||||||||    
T  19866 atgtatttcgtccttgcaattatgggtcgtttaaaaattggtccctgtgatcgctaatccttgcaaattacctttgcattctttaatcattt 19957  T

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Target: scaffold0559 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0559
Description:

Target: scaffold0559; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 196
Target Start/End: Original strand, 1233 - 1303
Alignment:
Q  126 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattactctctgtaatcgttaatcctg 196  Q
    |||||| ||||||||||   ||||||||||||||| ||||||||||||  || ||||||| | ||||||||    
T  1233 ggcttattgatgtgtttaacccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctg 1303  T

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