View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17697_low_11 (Length: 252)
Name: NF17697_low_11
Description: NF17697
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17697_low_11 |
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Alignment Details
Target: chr2 (Bit Score: 238; Significance: 1e-132; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 2 - 247
Target Start/End: Original strand, 3420706 - 3420951
Alignment:
| Q |
2 |
tagaagcagttcaatattctcgtaaatattttcttctttaagcatgcgcataaattcctgcaacatgttacaggaaattagttttaaaaacgaccatacc |
101 |
Q |
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| T |
3420706 |
tagaagcagttcaatattctcgtaaatattttattctttaagcatgcccataaattcctgcaacatgttacaggaaattagttttaaaaacgaccatacc |
3420805 |
T |
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| Q |
102 |
ttatatcagtaatatgtttaattagtaccaaaaacaattagttaatttctaacttactttaattttgtttatacttcataataaataaatggcaattctg |
201 |
Q |
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| T |
3420806 |
ttatatcagtaatatgtttaattagtaccaaaaacaattagttaatttctaacttactttaattttgtttatacttcataataaataaatggcaattctg |
3420905 |
T |
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| Q |
202 |
aacatggagaataagtaaaccacaaaaatactcatttgtaaagaat |
247 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3420906 |
aacatggagaataagtaaaccacaaaaatactcatttgtaaagaat |
3420951 |
T |
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