View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17697_low_9 (Length: 322)
Name: NF17697_low_9
Description: NF17697
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17697_low_9 |
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Alignment Details
Target: chr1 (Bit Score: 284; Significance: 1e-159; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 11 - 306
Target Start/End: Complemental strand, 4132932 - 4132637
Alignment:
| Q |
11 |
caaaggtcgctataaagttttggtgtgtataactatgctattttgcggtcttgtattctggcgcagcacgttgatgtctttctcagcagagtgcagaaac |
110 |
Q |
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| T |
4132932 |
caaaggtcgctataaagttttggtgtgtataactatgctattttgcggtcttgtattttggcgcagcatgttgatgtctttctcagcagagtgcagaaac |
4132833 |
T |
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| Q |
111 |
gattgggaatatttgtgctctgactattggattatttctctttatggagggtgtgactttgagccaatagttctcaaacttcaatgaatgtgattcgtga |
210 |
Q |
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| T |
4132832 |
gattgggaatatttgtgctctgactattggattatttctctttatggagggtgtgactttgagccaatagttctcaaacttcaatgaatgtgattcgtga |
4132733 |
T |
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| Q |
211 |
gaattggaagtagctagcttttcattttgtgattgtagttcgttctgttttctctgctcaatttctctgcataactacagatttctagtgtgtggg |
306 |
Q |
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||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4132732 |
gaattggaagtagctagcttttcattttgcgattgtagttcgttctgttttctctgctcaatttctctgcataactacagatttctagtgtgtggg |
4132637 |
T |
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