View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17698_high_25 (Length: 291)

Name: NF17698_high_25
Description: NF17698
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17698_high_25
NF17698_high_25
[»] chr3 (34 HSPs)
chr3 (114-167)||(23043686-23043740)
chr3 (17-88)||(23043729-23043800)
chr3 (183-216)||(4521556-4521589)
chr3 (183-216)||(20199433-20199466)
chr3 (183-216)||(24397460-24397493)
chr3 (183-216)||(26001281-26001314)
chr3 (183-216)||(28146503-28146536)
chr3 (183-216)||(28146614-28146647)
chr3 (183-216)||(36790174-36790207)
chr3 (183-216)||(47175553-47175586)
chr3 (181-216)||(881809-881844)
chr3 (182-216)||(3732546-3732580)
chr3 (116-210)||(37567238-37567332)
chr3 (116-210)||(44962622-44962716)
chr3 (181-210)||(1326686-1326715)
chr3 (181-210)||(7157331-7157360)
chr3 (181-210)||(14460266-14460295)
chr3 (183-216)||(23043639-23043672)
chr3 (183-216)||(31185718-31185751)
chr3 (181-210)||(36019709-36019738)
chr3 (183-216)||(44568669-44568702)
chr3 (181-210)||(45927305-45927334)
chr3 (181-210)||(48389051-48389080)
chr3 (181-210)||(48925704-48925733)
chr3 (181-210)||(48990397-48990426)
chr3 (181-210)||(49951218-49951247)
chr3 (181-210)||(50560654-50560683)
chr3 (181-210)||(51235606-51235635)
chr3 (181-210)||(52782452-52782481)
chr3 (181-210)||(53376676-53376705)
chr3 (181-210)||(54008990-54009019)
chr3 (181-210)||(55365667-55365696)
chr3 (184-216)||(29384771-29384803)
chr3 (181-213)||(32720070-32720102)
[»] chr8 (40 HSPs)
chr8 (181-216)||(5982473-5982508)
chr8 (182-216)||(36569936-36569970)
chr8 (182-216)||(44637207-44637241)
chr8 (183-216)||(2880216-2880249)
chr8 (183-216)||(17069520-17069553)
chr8 (183-216)||(17578720-17578753)
chr8 (183-216)||(40972352-40972385)
chr8 (183-216)||(41674570-41674603)
chr8 (181-216)||(3052884-3052919)
chr8 (181-216)||(32071527-32071562)
chr8 (181-216)||(38803519-38803554)
chr8 (181-216)||(41571996-41572031)
chr8 (181-215)||(27101099-27101133)
chr8 (181-210)||(196358-196387)
chr8 (181-210)||(311195-311224)
chr8 (181-210)||(464334-464363)
chr8 (181-210)||(1426621-1426650)
chr8 (183-216)||(5215608-5215641)
chr8 (183-216)||(5273145-5273178)
chr8 (181-210)||(7223568-7223597)
chr8 (183-216)||(11360455-11360488)
chr8 (181-210)||(12266369-12266398)
chr8 (181-210)||(28897196-28897225)
chr8 (183-216)||(29604301-29604334)
chr8 (183-216)||(34058117-34058150)
chr8 (181-210)||(36835427-36835456)
chr8 (181-210)||(37404895-37404924)
chr8 (181-210)||(37766595-37766624)
chr8 (181-210)||(38627072-38627101)
chr8 (181-210)||(38971549-38971578)
chr8 (181-210)||(39002647-39002676)
chr8 (183-216)||(40824550-40824583)
chr8 (181-210)||(43183018-43183047)
chr8 (183-216)||(43331830-43331863)
chr8 (183-216)||(44309652-44309685)
chr8 (181-210)||(45393739-45393768)
chr8 (181-210)||(45401233-45401262)
chr8 (181-216)||(2666594-2666630)
chr8 (181-213)||(27970097-27970129)
chr8 (181-216)||(34520654-34520690)
[»] chr7 (32 HSPs)
chr7 (181-216)||(16200815-16200850)
chr7 (182-216)||(8648324-8648358)
chr7 (182-216)||(22904779-22904813)
chr7 (183-216)||(3228327-3228360)
chr7 (183-216)||(11640381-11640414)
chr7 (183-216)||(19345698-19345731)
chr7 (183-216)||(25411913-25411946)
chr7 (183-216)||(45701322-45701355)
chr7 (183-216)||(49079339-49079372)
chr7 (181-216)||(2932868-2932903)
chr7 (181-216)||(7574401-7574436)
chr7 (181-216)||(31311431-31311466)
chr7 (116-210)||(32186718-32186812)
chr7 (116-210)||(41715434-41715528)
chr7 (116-210)||(45197097-45197191)
chr7 (182-216)||(45442140-45442174)
chr7 (181-210)||(2038388-2038417)
chr7 (181-210)||(9923155-9923184)
chr7 (181-210)||(15090753-15090782)
chr7 (181-210)||(18922661-18922690)
chr7 (181-210)||(24505208-24505237)
chr7 (183-216)||(27427419-27427452)
chr7 (181-210)||(39444050-39444079)
chr7 (183-216)||(40331345-40331378)
chr7 (181-210)||(40947266-40947295)
chr7 (183-216)||(41311140-41311173)
chr7 (181-210)||(42039387-42039416)
chr7 (181-210)||(42902679-42902708)
chr7 (183-216)||(43541868-43541901)
chr7 (181-210)||(47069254-47069283)
chr7 (181-210)||(47220040-47220069)
chr7 (181-213)||(1343106-1343138)
[»] chr1 (53 HSPs)
chr1 (181-216)||(22864754-22864789)
chr1 (181-216)||(48313595-48313630)
chr1 (182-216)||(13216383-13216417)
chr1 (182-216)||(41568530-41568564)
chr1 (182-216)||(43536962-43536996)
chr1 (182-216)||(46282027-46282061)
chr1 (183-216)||(14077416-14077449)
chr1 (116-209)||(22821267-22821361)
chr1 (183-216)||(35912919-35912952)
chr1 (183-216)||(39085001-39085034)
chr1 (183-216)||(40868421-40868454)
chr1 (183-216)||(51873561-51873594)
chr1 (181-213)||(1658830-1658862)
chr1 (185-216)||(17202831-17202862)
chr1 (181-216)||(28095035-28095070)
chr1 (181-216)||(33234341-33234376)
chr1 (181-216)||(33771931-33771966)
chr1 (181-216)||(39871672-39871707)
chr1 (181-216)||(49739228-49739263)
chr1 (116-210)||(27801830-27801924)
chr1 (182-216)||(35534159-35534193)
chr1 (180-210)||(41321089-41321119)
chr1 (116-210)||(52274012-52274106)
chr1 (181-210)||(3150478-3150507)
chr1 (181-210)||(5057284-5057313)
chr1 (183-216)||(5957545-5957578)
chr1 (181-210)||(7426953-7426982)
chr1 (181-210)||(8569269-8569298)
chr1 (181-210)||(9223147-9223176)
chr1 (181-210)||(10061242-10061271)
chr1 (181-210)||(10635689-10635718)
chr1 (183-216)||(12227209-12227242)
chr1 (181-210)||(14190975-14191004)
chr1 (181-210)||(17376440-17376469)
chr1 (183-216)||(24677839-24677872)
chr1 (181-210)||(25493583-25493612)
chr1 (181-210)||(27038628-27038657)
chr1 (181-210)||(29171250-29171279)
chr1 (181-210)||(31016160-31016189)
chr1 (181-210)||(31571262-31571291)
chr1 (183-216)||(33082075-33082108)
chr1 (181-210)||(33829158-33829187)
chr1 (181-210)||(33838779-33838808)
chr1 (181-210)||(37765546-37765575)
chr1 (181-210)||(39853042-39853071)
chr1 (181-210)||(40850106-40850135)
chr1 (181-210)||(43224938-43224967)
chr1 (181-210)||(44647538-44647567)
chr1 (183-216)||(47458611-47458644)
chr1 (181-210)||(48480935-48480964)
chr1 (183-216)||(50534171-50534204)
chr1 (116-167)||(9260151-9260203)
chr1 (116-167)||(46872389-46872441)
[»] chr5 (32 HSPs)
chr5 (182-216)||(10118531-10118565)
chr5 (183-216)||(2011345-2011378)
chr5 (183-216)||(9499314-9499347)
chr5 (183-216)||(9499474-9499507)
chr5 (183-216)||(16602649-16602682)
chr5 (183-216)||(18480154-18480187)
chr5 (116-167)||(31236924-31236976)
chr5 (181-216)||(4039758-4039793)
chr5 (181-216)||(32624261-32624296)
chr5 (181-216)||(35162435-35162470)
chr5 (116-210)||(16729744-16729838)
chr5 (116-210)||(23189360-23189454)
chr5 (181-210)||(2148419-2148448)
chr5 (181-210)||(3881916-3881945)
chr5 (183-216)||(6335477-6335510)
chr5 (181-210)||(9530447-9530476)
chr5 (183-216)||(12336300-12336333)
chr5 (181-210)||(13589157-13589186)
chr5 (183-216)||(13593568-13593601)
chr5 (181-210)||(15726030-15726059)
chr5 (181-210)||(19125997-19126026)
chr5 (183-216)||(19238880-19238913)
chr5 (181-210)||(25684158-25684187)
chr5 (181-210)||(28770239-28770268)
chr5 (183-216)||(29666107-29666140)
chr5 (181-210)||(33001740-33001769)
chr5 (183-212)||(36409994-36410023)
chr5 (181-210)||(37314130-37314159)
chr5 (181-210)||(39541012-39541041)
chr5 (181-210)||(40340513-40340542)
chr5 (181-210)||(42534686-42534715)
chr5 (181-210)||(43411809-43411838)
[»] chr4 (31 HSPs)
chr4 (116-210)||(42244830-42244924)
chr4 (183-216)||(1792114-1792147)
chr4 (183-216)||(6882820-6882853)
chr4 (183-216)||(17370563-17370596)
chr4 (183-216)||(32882354-32882387)
chr4 (183-216)||(48207164-48207197)
chr4 (183-216)||(52415059-52415092)
chr4 (181-216)||(27635824-27635859)
chr4 (181-216)||(42080614-42080649)
chr4 (181-216)||(54505852-54505887)
chr4 (116-210)||(46633896-46633991)
chr4 (116-210)||(48549959-48550053)
chr4 (181-215)||(56016881-56016915)
chr4 (183-216)||(3690596-3690629)
chr4 (181-210)||(10779284-10779313)
chr4 (181-210)||(16004826-16004855)
chr4 (183-216)||(19627686-19627719)
chr4 (181-210)||(23639528-23639557)
chr4 (181-210)||(24292062-24292091)
chr4 (183-216)||(25684381-25684414)
chr4 (183-216)||(30168385-30168418)
chr4 (181-210)||(33612608-33612637)
chr4 (181-210)||(36569733-36569762)
chr4 (181-210)||(38955335-38955364)
chr4 (181-210)||(44998495-44998524)
chr4 (181-210)||(45629193-45629222)
chr4 (181-210)||(46630938-46630967)
chr4 (181-210)||(54499659-54499688)
chr4 (116-167)||(24291998-24292050)
chr4 (184-216)||(46688188-46688220)
chr4 (181-213)||(52940566-52940598)
[»] chr2 (38 HSPs)
chr2 (182-216)||(43359189-43359223)
chr2 (183-216)||(4108393-4108426)
chr2 (183-216)||(7069280-7069313)
chr2 (183-216)||(7366593-7366626)
chr2 (183-216)||(16718722-16718755)
chr2 (183-216)||(28318328-28318361)
chr2 (183-216)||(33429219-33429252)
chr2 (183-216)||(36428794-36428827)
chr2 (181-213)||(41839739-41839771)
chr2 (181-216)||(11986477-11986512)
chr2 (181-216)||(19268850-19268885)
chr2 (181-216)||(21425297-21425332)
chr2 (181-216)||(33716581-33716616)
chr2 (181-216)||(37425501-37425536)
chr2 (186-216)||(2283450-2283480)
chr2 (116-210)||(45555402-45555496)
chr2 (181-210)||(490027-490056)
chr2 (181-210)||(1860012-1860041)
chr2 (181-210)||(2317131-2317160)
chr2 (181-210)||(3724234-3724263)
chr2 (181-210)||(5085132-5085161)
chr2 (181-210)||(6657528-6657557)
chr2 (181-210)||(7504316-7504345)
chr2 (183-216)||(8504313-8504346)
chr2 (181-210)||(16815143-16815172)
chr2 (181-210)||(18009247-18009276)
chr2 (181-210)||(26738117-26738146)
chr2 (181-210)||(28394155-28394184)
chr2 (181-210)||(33424025-33424054)
chr2 (181-210)||(36192263-36192292)
chr2 (181-210)||(36947775-36947804)
chr2 (181-210)||(37725636-37725665)
chr2 (181-210)||(39879212-39879241)
chr2 (181-210)||(40533336-40533365)
chr2 (183-216)||(41184573-41184606)
chr2 (182-210)||(18576593-18576621)
chr2 (116-167)||(18576646-18576698)
chr2 (116-167)||(35292530-35292582)
[»] scaffold0325 (1 HSPs)
scaffold0325 (183-216)||(1500-1533)
[»] chr6 (23 HSPs)
chr6 (183-216)||(926627-926660)
chr6 (183-216)||(6295464-6295497)
chr6 (183-216)||(22084909-22084942)
chr6 (182-216)||(14872613-14872647)
chr6 (183-216)||(2138436-2138469)
chr6 (183-216)||(3954191-3954224)
chr6 (181-210)||(6016097-6016126)
chr6 (183-216)||(11273703-11273736)
chr6 (183-216)||(14501112-14501145)
chr6 (183-216)||(14715553-14715586)
chr6 (181-210)||(16989405-16989434)
chr6 (183-216)||(21998700-21998733)
chr6 (183-216)||(24151412-24151445)
chr6 (181-210)||(26810862-26810891)
chr6 (181-210)||(27719297-27719326)
chr6 (181-210)||(32519025-32519054)
chr6 (181-210)||(33954536-33954565)
chr6 (181-210)||(34315417-34315446)
chr6 (181-210)||(34969537-34969566)
chr6 (181-210)||(35225123-35225152)
chr6 (182-210)||(1338940-1338968)
chr6 (182-210)||(18871009-18871037)
chr6 (181-213)||(21181224-21181256)
[»] scaffold0072 (1 HSPs)
scaffold0072 (182-216)||(47862-47896)
[»] scaffold1999 (1 HSPs)
scaffold1999 (181-210)||(1088-1117)
[»] scaffold0493 (1 HSPs)
scaffold0493 (181-210)||(1467-1496)
[»] scaffold0349 (1 HSPs)
scaffold0349 (181-210)||(8719-8748)
[»] scaffold0121 (1 HSPs)
scaffold0121 (181-210)||(13688-13717)
[»] scaffold0067 (1 HSPs)
scaffold0067 (183-216)||(41475-41508)
[»] scaffold0022 (1 HSPs)
scaffold0022 (181-210)||(166710-166739)
[»] scaffold0005 (1 HSPs)
scaffold0005 (181-210)||(291708-291737)


Alignment Details
Target: chr3 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 114 - 167
Target Start/End: Complemental strand, 23043740 - 23043686
Alignment:
Q  114 ttcaataaatttggatgtattggtacatc-agtcgttacattaataataaatgag 167  Q
    |||||||||||| |||||||||||||||| ||| |||||||||||||||||||||    
T  23043740 ttcaataaattttgatgtattggtacatcaagttgttacattaataataaatgag 23043686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 88
Target Start/End: Complemental strand, 23043800 - 23043729
Alignment:
Q  17 agaaggtaaccatgactaaagttcaaagagtgggttagataagaaaaattttatggtacatctaataaattt 88  Q
    |||||||||||||||||||||||||||||||| ||||  ||||  ||||| |||||||| |  |||||||||    
T  23043800 agaaggtaaccatgactaaagttcaaagagtgagttatttaaggcaaattatatggtactttcaataaattt 23043729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 4521589 - 4521556
Alignment:
Q  183 aaaaataattattttctatcattgacaattataa 216  Q
    ||||||||||||||||||||||||||||||||||    
T  4521589 aaaaataattattttctatcattgacaattataa 4521556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 20199433 - 20199466
Alignment:
Q  183 aaaaataattattttctatcattgacaattataa 216  Q
    ||||||||||||||||||||||||||||||||||    
T  20199433 aaaaataattattttctatcattgacaattataa 20199466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 24397460 - 24397493
Alignment:
Q  183 aaaaataattattttctatcattgacaattataa 216  Q
    ||||||||||||||||||||||||||||||||||    
T  24397460 aaaaataattattttctatcattgacaattataa 24397493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 26001281 - 26001314
Alignment:
Q  183 aaaaataattattttctatcattgacaattataa 216  Q
    ||||||||||||||||||||||||||||||||||    
T  26001281 aaaaataattattttctatcattgacaattataa 26001314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 28146536 - 28146503
Alignment:
Q  183 aaaaataattattttctatcattgacaattataa 216  Q
    ||||||||||||||||||||||||||||||||||    
T  28146536 aaaaataattattttctatcattgacaattataa 28146503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 28146647 - 28146614
Alignment:
Q  183 aaaaataattattttctatcattgacaattataa 216  Q
    ||||||||||||||||||||||||||||||||||    
T  28146647 aaaaataattattttctatcattgacaattataa 28146614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 36790207 - 36790174
Alignment:
Q  183 aaaaataattattttctatcattgacaattataa 216  Q
    ||||||||||||||||||||||||||||||||||    
T  36790207 aaaaataattattttctatcattgacaattataa 36790174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 47175553 - 47175586
Alignment:
Q  183 aaaaataattattttctatcattgacaattataa 216  Q
    ||||||||||||||||||||||||||||||||||    
T  47175553 aaaaataattattttctatcattgacaattataa 47175586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 216
Target Start/End: Original strand, 881809 - 881844
Alignment:
Q  181 agaaaaataattattttctatcattgacaattataa 216  Q
    |||||||||||||||||||||||||||||| |||||    
T  881809 agaaaaataattattttctatcattgacaactataa 881844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 216
Target Start/End: Complemental strand, 3732580 - 3732546
Alignment:
Q  182 gaaaaataattattttctatcattgacaattataa 216  Q
    ||||||||||||||||||| |||||||||||||||    
T  3732580 gaaaaataattattttctaacattgacaattataa 3732546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 210
Target Start/End: Original strand, 37567238 - 37567332
Alignment:
Q  116 caataaatttggatgtattggtacatca-gtcgttacattaataataaatgagnnnnnnnnnnnatagaaaaataattattttctatcattgacaa 210  Q
    |||||||||||||||||| |||||| || ||||| | ||||||||||||||||           | ||||||||||||||||||||||||||||||    
T  37567238 caataaatttggatgtatcggtacaccaagtcgtaaaattaataataaatgagttgtttttttga-agaaaaataattattttctatcattgacaa 37567332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 210
Target Start/End: Original strand, 44962622 - 44962716
Alignment:
Q  116 caataaatttggatgtattggtacatca-gtcgttacattaataataaatgagnnnnnnnnnnnatagaaaaataattattttctatcattgacaa 210  Q
    |||||||||||| |||||||||||| || ||||| | ||||||||||||||||           | ||||||||||||||||||||||||||||||    
T  44962622 caataaatttgggtgtattggtacaccaagtcgtaaaattaataataaatgagttgtttttttga-agaaaaataattattttctatcattgacaa 44962716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Original strand, 1326686 - 1326715
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  1326686 agaaaaataattattttctatcattgacaa 1326715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Complemental strand, 7157360 - 7157331
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  7157360 agaaaaataattattttctatcattgacaa 7157331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Original strand, 14460266 - 14460295
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  14460266 agaaaaataattattttctatcattgacaa 14460295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 23043672 - 23043639
Alignment:
Q  183 aaaaataattattttctatcattgacaattataa 216  Q
    |||||||||||||||||||||||||||| |||||    
T  23043672 aaaaataattattttctatcattgacaactataa 23043639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 31185751 - 31185718
Alignment:
Q  183 aaaaataattattttctatcattgacaattataa 216  Q
    ||||||||||||||||||||||||| ||||||||    
T  31185751 aaaaataattattttctatcattgataattataa 31185718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Complemental strand, 36019738 - 36019709
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  36019738 agaaaaataattattttctatcattgacaa 36019709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 44568669 - 44568702
Alignment:
Q  183 aaaaataattattttctatcattgacaattataa 216  Q
    |||| |||||||||||||||||||||||||||||    
T  44568669 aaaactaattattttctatcattgacaattataa 44568702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Original strand, 45927305 - 45927334
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  45927305 agaaaaataattattttctatcattgacaa 45927334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Complemental strand, 48389080 - 48389051
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  48389080 agaaaaataattattttctatcattgacaa 48389051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Complemental strand, 48925733 - 48925704
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  48925733 agaaaaataattattttctatcattgacaa 48925704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Original strand, 48990397 - 48990426
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  48990397 agaaaaataattattttctatcattgacaa 48990426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Complemental strand, 49951247 - 49951218
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  49951247 agaaaaataattattttctatcattgacaa 49951218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Complemental strand, 50560683 - 50560654
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  50560683 agaaaaataattattttctatcattgacaa 50560654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Original strand, 51235606 - 51235635
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  51235606 agaaaaataattattttctatcattgacaa 51235635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Complemental strand, 52782481 - 52782452
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  52782481 agaaaaataattattttctatcattgacaa 52782452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Original strand, 53376676 - 53376705
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  53376676 agaaaaataattattttctatcattgacaa 53376705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Original strand, 54008990 - 54009019
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  54008990 agaaaaataattattttctatcattgacaa 54009019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Complemental strand, 55365696 - 55365667
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  55365696 agaaaaataattattttctatcattgacaa 55365667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 216
Target Start/End: Original strand, 29384771 - 29384803
Alignment:
Q  184 aaaataattattttctatcattgacaattataa 216  Q
    |||| ||||||||||||||||||||||||||||    
T  29384771 aaaaaaattattttctatcattgacaattataa 29384803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 213
Target Start/End: Original strand, 32720070 - 32720102
Alignment:
Q  181 agaaaaataattattttctatcattgacaatta 213  Q
    ||||||||||||||||||||||||| |||||||    
T  32720070 agaaaaataattattttctatcattaacaatta 32720102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 36; Significance: 0.00000000003; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 216
Target Start/End: Complemental strand, 5982508 - 5982473
Alignment:
Q  181 agaaaaataattattttctatcattgacaattataa 216  Q
    ||||||||||||||||||||||||||||||||||||    
T  5982508 agaaaaataattattttctatcattgacaattataa 5982473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 182 - 216
Target Start/End: Complemental strand, 36569970 - 36569936
Alignment:
Q  182 gaaaaataattattttctatcattgacaattataa 216  Q
    |||||||||||||||||||||||||||||||||||    
T  36569970 gaaaaataattattttctatcattgacaattataa 36569936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 182 - 216
Target Start/End: Complemental strand, 44637241 - 44637207
Alignment:
Q  182 gaaaaataattattttctatcattgacaattataa 216  Q
    |||||||||||||||||||||||||||||||||||    
T  44637241 gaaaaataattattttctatcattgacaattataa 44637207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 2880249 - 2880216
Alignment:
Q  183 aaaaataattattttctatcattgacaattataa 216  Q
    ||||||||||||||||||||||||||||||||||    
T  2880249 aaaaataattattttctatcattgacaattataa 2880216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 17069553 - 17069520
Alignment:
Q  183 aaaaataattattttctatcattgacaattataa 216  Q
    ||||||||||||||||||||||||||||||||||    
T  17069553 aaaaataattattttctatcattgacaattataa 17069520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 17578720 - 17578753
Alignment:
Q  183 aaaaataattattttctatcattgacaattataa 216  Q
    ||||||||||||||||||||||||||||||||||    
T  17578720 aaaaataattattttctatcattgacaattataa 17578753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 40972385 - 40972352
Alignment:
Q  183 aaaaataattattttctatcattgacaattataa 216  Q
    ||||||||||||||||||||||||||||||||||    
T  40972385 aaaaataattattttctatcattgacaattataa 40972352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 41674570 - 41674603
Alignment:
Q  183 aaaaataattattttctatcattgacaattataa 216  Q
    ||||||||||||||||||||||||||||||||||    
T  41674570 aaaaataattattttctatcattgacaattataa 41674603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 216
Target Start/End: Original strand, 3052884 - 3052919
Alignment:
Q  181 agaaaaataattattttctatcattgacaattataa 216  Q
    |||||||||||||||||||||||||||||| |||||    
T  3052884 agaaaaataattattttctatcattgacaactataa 3052919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 216
Target Start/End: Complemental strand, 32071562 - 32071527
Alignment:
Q  181 agaaaaataattattttctatcattgacaattataa 216  Q
    ||||||| ||||||||||||||||||||||||||||    
T  32071562 agaaaaagaattattttctatcattgacaattataa 32071527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 216
Target Start/End: Original strand, 38803519 - 38803554
Alignment:
Q  181 agaaaaataattattttctatcattgacaattataa 216  Q
    |||||||||||||||||||||||||||||| |||||    
T  38803519 agaaaaataattattttctatcattgacaactataa 38803554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 216
Target Start/End: Complemental strand, 41572031 - 41571996
Alignment:
Q  181 agaaaaataattattttctatcattgacaattataa 216  Q
    |||| |||||||||||||||||||||||||||||||    
T  41572031 agaagaataattattttctatcattgacaattataa 41571996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 215
Target Start/End: Complemental strand, 27101133 - 27101099
Alignment:
Q  181 agaaaaataattattttctatcattgacaattata 215  Q
    |||||||||||||||||||||||||||||| ||||    
T  27101133 agaaaaataattattttctatcattgacaactata 27101099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Complemental strand, 196387 - 196358
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  196387 agaaaaataattattttctatcattgacaa 196358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Complemental strand, 311224 - 311195
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  311224 agaaaaataattattttctatcattgacaa 311195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Original strand, 464334 - 464363
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  464334 agaaaaataattattttctatcattgacaa 464363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Complemental strand, 1426650 - 1426621
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  1426650 agaaaaataattattttctatcattgacaa 1426621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 5215641 - 5215608
Alignment:
Q  183 aaaaataattattttctatcattgacaattataa 216  Q
    |||||| |||||||||||||||||||||||||||    
T  5215641 aaaaatcattattttctatcattgacaattataa 5215608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 5273145 - 5273178
Alignment:
Q  183 aaaaataattattttctatcattgacaattataa 216  Q
    |||||||||||||||||||||||| |||||||||    
T  5273145 aaaaataattattttctatcattggcaattataa 5273178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Original strand, 7223568 - 7223597
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  7223568 agaaaaataattattttctatcattgacaa 7223597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 11360488 - 11360455
Alignment:
Q  183 aaaaataattattttctatcattgacaattataa 216  Q
    |||||||||||||||||||||||| |||||||||    
T  11360488 aaaaataattattttctatcattggcaattataa 11360455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Complemental strand, 12266398 - 12266369
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  12266398 agaaaaataattattttctatcattgacaa 12266369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Complemental strand, 28897225 - 28897196
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  28897225 agaaaaataattattttctatcattgacaa 28897196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 29604334 - 29604301
Alignment:
Q  183 aaaaataattattttctatcattgacaattataa 216  Q
    ||||||||||||||||||||||| ||||||||||    
T  29604334 aaaaataattattttctatcattaacaattataa 29604301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 34058150 - 34058117
Alignment:
Q  183 aaaaataattattttctatcattgacaattataa 216  Q
    |||||||||||||||||||||||||||| |||||    
T  34058150 aaaaataattattttctatcattgacaactataa 34058117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Original strand, 36835427 - 36835456
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  36835427 agaaaaataattattttctatcattgacaa 36835456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Complemental strand, 37404924 - 37404895
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  37404924 agaaaaataattattttctatcattgacaa 37404895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Complemental strand, 37766624 - 37766595
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  37766624 agaaaaataattattttctatcattgacaa 37766595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Original strand, 38627072 - 38627101
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  38627072 agaaaaataattattttctatcattgacaa 38627101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Original strand, 38971549 - 38971578
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  38971549 agaaaaataattattttctatcattgacaa 38971578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Original strand, 39002647 - 39002676
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  39002647 agaaaaataattattttctatcattgacaa 39002676  T

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Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 40824550 - 40824583
Alignment:
Q  183 aaaaataattattttctatcattgacaattataa 216  Q
    ||||||||||||||||||||||| ||||||||||    
T  40824550 aaaaataattattttctatcattaacaattataa 40824583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Complemental strand, 43183047 - 43183018
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  43183047 agaaaaataattattttctatcattgacaa 43183018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 43331830 - 43331863
Alignment:
Q  183 aaaaataattattttctatcattgacaattataa 216  Q
    |||||||||||||||||||||||||||| |||||    
T  43331830 aaaaataattattttctatcattgacaactataa 43331863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 44309652 - 44309685
Alignment:
Q  183 aaaaataattattttctatcattgacaattataa 216  Q
    |||||||||||||||||||||||||||| |||||    
T  44309652 aaaaataattattttctatcattgacaactataa 44309685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Complemental strand, 45393768 - 45393739
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  45393768 agaaaaataattattttctatcattgacaa 45393739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Original strand, 45401233 - 45401262
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  45401233 agaaaaataattattttctatcattgacaa 45401262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 216
Target Start/End: Original strand, 2666594 - 2666630
Alignment:
Q  181 agaaaaat-aattattttctatcattgacaattataa 216  Q
    |||||||| ||||||||||||||||||||||||||||    
T  2666594 agaaaaatgaattattttctatcattgacaattataa 2666630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 213
Target Start/End: Original strand, 27970097 - 27970129
Alignment:
Q  181 agaaaaataattattttctatcattgacaatta 213  Q
    |||||||||||| ||||||||||||||||||||    
T  27970097 agaaaaataattgttttctatcattgacaatta 27970129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 216
Target Start/End: Original strand, 34520654 - 34520690
Alignment:
Q  181 agaaaaat-aattattttctatcattgacaattataa 216  Q
    |||||||| ||||||||||||||||||||||||||||    
T  34520654 agaaaaatgaattattttctatcattgacaattataa 34520690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 36; Significance: 0.00000000003; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 216
Target Start/End: Complemental strand, 16200850 - 16200815
Alignment:
Q  181 agaaaaataattattttctatcattgacaattataa 216  Q
    ||||||||||||||||||||||||||||||||||||    
T  16200850 agaaaaataattattttctatcattgacaattataa 16200815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 182 - 216
Target Start/End: Complemental strand, 8648358 - 8648324
Alignment:
Q  182 gaaaaataattattttctatcattgacaattataa 216  Q
    |||||||||||||||||||||||||||||||||||    
T  8648358 gaaaaataattattttctatcattgacaattataa 8648324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 182 - 216
Target Start/End: Complemental strand, 22904813 - 22904779
Alignment:
Q  182 gaaaaataattattttctatcattgacaattataa 216  Q
    |||||||||||||||||||||||||||||||||||    
T  22904813 gaaaaataattattttctatcattgacaattataa 22904779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 3228327 - 3228360
Alignment:
Q  183 aaaaataattattttctatcattgacaattataa 216  Q
    ||||||||||||||||||||||||||||||||||    
T  3228327 aaaaataattattttctatcattgacaattataa 3228360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 11640381 - 11640414
Alignment:
Q  183 aaaaataattattttctatcattgacaattataa 216  Q
    ||||||||||||||||||||||||||||||||||    
T  11640381 aaaaataattattttctatcattgacaattataa 11640414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 19345698 - 19345731
Alignment:
Q  183 aaaaataattattttctatcattgacaattataa 216  Q
    ||||||||||||||||||||||||||||||||||    
T  19345698 aaaaataattattttctatcattgacaattataa 19345731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 25411946 - 25411913
Alignment:
Q  183 aaaaataattattttctatcattgacaattataa 216  Q
    ||||||||||||||||||||||||||||||||||    
T  25411946 aaaaataattattttctatcattgacaattataa 25411913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 45701355 - 45701322
Alignment:
Q  183 aaaaataattattttctatcattgacaattataa 216  Q
    ||||||||||||||||||||||||||||||||||    
T  45701355 aaaaataattattttctatcattgacaattataa 45701322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 49079339 - 49079372
Alignment:
Q  183 aaaaataattattttctatcattgacaattataa 216  Q
    ||||||||||||||||||||||||||||||||||    
T  49079339 aaaaataattattttctatcattgacaattataa 49079372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 216
Target Start/End: Complemental strand, 2932903 - 2932868
Alignment:
Q  181 agaaaaataattattttctatcattgacaattataa 216  Q
    ||||||||||||||||| ||||||||||||||||||    
T  2932903 agaaaaataattattttatatcattgacaattataa 2932868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 216
Target Start/End: Complemental strand, 7574436 - 7574401
Alignment:
Q  181 agaaaaataattattttctatcattgacaattataa 216  Q
    |||||||||||||||||||||||||||||| |||||    
T  7574436 agaaaaataattattttctatcattgacaactataa 7574401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 216
Target Start/End: Original strand, 31311431 - 31311466
Alignment:
Q  181 agaaaaataattattttctatcattgacaattataa 216  Q
    ||||||| ||||||||||||||||||||||||||||    
T  31311431 agaaaaagaattattttctatcattgacaattataa 31311466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 210
Target Start/End: Complemental strand, 32186812 - 32186718
Alignment:
Q  116 caataaatttggatgtattggtacatca-gtcgttacattaataataaatgagnnnnnnnnnnnatagaaaaataattattttctatcattgacaa 210  Q
    |||||||||||||||||| |||||| || ||||| | ||||||||||||||||           | ||||||||||||||||||||||||||||||    
T  32186812 caataaatttggatgtatcggtacaccaagtcgtaaaattaataataaatgagttgttttttaga-agaaaaataattattttctatcattgacaa 32186718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 210
Target Start/End: Complemental strand, 41715528 - 41715434
Alignment:
Q  116 caataaatttggatgtattggtacatca-gtcgttacattaataataaatgagnnnnnnnnnnnatagaaaaataattattttctatcattgacaa 210  Q
    |||||||||||||||||| |||||| || ||||| | ||||||||||||||||           | ||||||||||||||||||||||||||||||    
T  41715528 caataaatttggatgtatcggtacaccaagtcgtaaaattaataataaatgagttgttttttaga-agaaaaataattattttctatcattgacaa 41715434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 210
Target Start/End: Complemental strand, 45197191 - 45197097
Alignment:
Q  116 caataaatttggatgtattggtaca-tcagtcgttacattaataataaatgagnnnnnnnnnnnatagaaaaataattattttctatcattgacaa 210  Q
    |||||||||||||||||| |||||| | |||||| | ||||||||||||||||           | ||||||||||||||||||||||||||||||    
T  45197191 caataaatttggatgtatcggtacactaagtcgtaaaattaataataaatgagttgtttttttga-agaaaaataattattttctatcattgacaa 45197097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 216
Target Start/End: Original strand, 45442140 - 45442174
Alignment:
Q  182 gaaaaataattattttctatcattgacaattataa 216  Q
    ||||||||||||||||||||||||| |||||||||    
T  45442140 gaaaaataattattttctatcattggcaattataa 45442174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Complemental strand, 2038417 - 2038388
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  2038417 agaaaaataattattttctatcattgacaa 2038388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Original strand, 9923155 - 9923184
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  9923155 agaaaaataattattttctatcattgacaa 9923184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Original strand, 15090753 - 15090782
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  15090753 agaaaaataattattttctatcattgacaa 15090782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Original strand, 18922661 - 18922690
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  18922661 agaaaaataattattttctatcattgacaa 18922690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Original strand, 24505208 - 24505237
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  24505208 agaaaaataattattttctatcattgacaa 24505237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 27427452 - 27427419
Alignment:
Q  183 aaaaataattattttctatcattgacaattataa 216  Q
    |||||||||||||||||||||||||||| |||||    
T  27427452 aaaaataattattttctatcattgacaactataa 27427419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Original strand, 39444050 - 39444079
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  39444050 agaaaaataattattttctatcattgacaa 39444079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 40331378 - 40331345
Alignment:
Q  183 aaaaataattattttctatcattgacaattataa 216  Q
    |||||||||||||||||||||||| |||||||||    
T  40331378 aaaaataattattttctatcattggcaattataa 40331345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Complemental strand, 40947295 - 40947266
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  40947295 agaaaaataattattttctatcattgacaa 40947266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 41311140 - 41311173
Alignment:
Q  183 aaaaataattattttctatcattgacaattataa 216  Q
    ||||||||||||||||||||||||| ||||||||    
T  41311140 aaaaataattattttctatcattgataattataa 41311173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Original strand, 42039387 - 42039416
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  42039387 agaaaaataattattttctatcattgacaa 42039416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Complemental strand, 42902708 - 42902679
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  42902708 agaaaaataattattttctatcattgacaa 42902679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 43541868 - 43541901
Alignment:
Q  183 aaaaataattattttctatcattgacaattataa 216  Q
    ||||| ||||||||||||||||||||||||||||    
T  43541868 aaaaagaattattttctatcattgacaattataa 43541901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Complemental strand, 47069283 - 47069254
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  47069283 agaaaaataattattttctatcattgacaa 47069254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Original strand, 47220040 - 47220069
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  47220040 agaaaaataattattttctatcattgacaa 47220069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 213
Target Start/End: Original strand, 1343106 - 1343138
Alignment:
Q  181 agaaaaataattattttctatcattgacaatta 213  Q
    |||||||||||| ||||||||||||||||||||    
T  1343106 agaaaaataattgttttctatcattgacaatta 1343138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 36; Significance: 0.00000000003; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 216
Target Start/End: Original strand, 22864754 - 22864789
Alignment:
Q  181 agaaaaataattattttctatcattgacaattataa 216  Q
    ||||||||||||||||||||||||||||||||||||    
T  22864754 agaaaaataattattttctatcattgacaattataa 22864789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 216
Target Start/End: Complemental strand, 48313630 - 48313595
Alignment:
Q  181 agaaaaataattattttctatcattgacaattataa 216  Q
    ||||||||||||||||||||||||||||||||||||    
T  48313630 agaaaaataattattttctatcattgacaattataa 48313595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 182 - 216
Target Start/End: Complemental strand, 13216417 - 13216383
Alignment:
Q  182 gaaaaataattattttctatcattgacaattataa 216  Q
    |||||||||||||||||||||||||||||||||||    
T  13216417 gaaaaataattattttctatcattgacaattataa 13216383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 182 - 216
Target Start/End: Original strand, 41568530 - 41568564
Alignment:
Q  182 gaaaaataattattttctatcattgacaattataa 216  Q
    |||||||||||||||||||||||||||||||||||    
T  41568530 gaaaaataattattttctatcattgacaattataa 41568564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 182 - 216
Target Start/End: Original strand, 43536962 - 43536996
Alignment:
Q  182 gaaaaataattattttctatcattgacaattataa 216  Q
    |||||||||||||||||||||||||||||||||||    
T  43536962 gaaaaataattattttctatcattgacaattataa 43536996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 182 - 216
Target Start/End: Original strand, 46282027 - 46282061
Alignment:
Q  182 gaaaaataattattttctatcattgacaattataa 216  Q
    |||||||||||||||||||||||||||||||||||    
T  46282027 gaaaaataattattttctatcattgacaattataa 46282061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 14077416 - 14077449
Alignment:
Q  183 aaaaataattattttctatcattgacaattataa 216  Q
    ||||||||||||||||||||||||||||||||||    
T  14077416 aaaaataattattttctatcattgacaattataa 14077449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 116 - 209
Target Start/End: Original strand, 22821267 - 22821361
Alignment:
Q  116 caataaatttggatgtattggtacatc-agtcgttacattaataataaatgagnnnnnnnnnnnatagaaaaataattattttctatcattgaca 209  Q
    |||||||||||||||||| |||||| | |||||||| ||||||||||||||||             |||||||||||||||||||||||||||||    
T  22821267 caataaatttggatgtatcggtacaccaagtcgttaaattaataataaatgagttgttttttttgaagaaaaataattattttctatcattgaca 22821361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 35912952 - 35912919
Alignment:
Q  183 aaaaataattattttctatcattgacaattataa 216  Q
    ||||||||||||||||||||||||||||||||||    
T  35912952 aaaaataattattttctatcattgacaattataa 35912919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 39085034 - 39085001
Alignment:
Q  183 aaaaataattattttctatcattgacaattataa 216  Q
    ||||||||||||||||||||||||||||||||||    
T  39085034 aaaaataattattttctatcattgacaattataa 39085001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 40868454 - 40868421
Alignment:
Q  183 aaaaataattattttctatcattgacaattataa 216  Q
    ||||||||||||||||||||||||||||||||||    
T  40868454 aaaaataattattttctatcattgacaattataa 40868421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 51873594 - 51873561
Alignment:
Q  183 aaaaataattattttctatcattgacaattataa 216  Q
    ||||||||||||||||||||||||||||||||||    
T  51873594 aaaaataattattttctatcattgacaattataa 51873561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 213
Target Start/End: Complemental strand, 1658862 - 1658830
Alignment:
Q  181 agaaaaataattattttctatcattgacaatta 213  Q
    |||||||||||||||||||||||||||||||||    
T  1658862 agaaaaataattattttctatcattgacaatta 1658830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 216
Target Start/End: Original strand, 17202831 - 17202862
Alignment:
Q  185 aaataattattttctatcattgacaattataa 216  Q
    ||||||||||||||||||||||||||||||||    
T  17202831 aaataattattttctatcattgacaattataa 17202862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 216
Target Start/End: Complemental strand, 28095070 - 28095035
Alignment:
Q  181 agaaaaataattattttctatcattgacaattataa 216  Q
    |||||||||||||||||||||||||||||| |||||    
T  28095070 agaaaaataattattttctatcattgacaactataa 28095035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 216
Target Start/End: Complemental strand, 33234376 - 33234341
Alignment:
Q  181 agaaaaataattattttctatcattgacaattataa 216  Q
    |||||||||||||||||||||||||||||| |||||    
T  33234376 agaaaaataattattttctatcattgacaactataa 33234341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 216
Target Start/End: Complemental strand, 33771966 - 33771931
Alignment:
Q  181 agaaaaataattattttctatcattgacaattataa 216  Q
    |||||||||||||||||||||||||||||| |||||    
T  33771966 agaaaaataattattttctatcattgacaactataa 33771931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 216
Target Start/End: Complemental strand, 39871707 - 39871672
Alignment:
Q  181 agaaaaataattattttctatcattgacaattataa 216  Q
    ||||||||| ||||||||||||||||||||||||||    
T  39871707 agaaaaatacttattttctatcattgacaattataa 39871672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 216
Target Start/End: Original strand, 49739228 - 49739263
Alignment:
Q  181 agaaaaataattattttctatcattgacaattataa 216  Q
    |||||||||||||||||||||||||||||| |||||    
T  49739228 agaaaaataattattttctatcattgacaactataa 49739263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 210
Target Start/End: Original strand, 27801830 - 27801924
Alignment:
Q  116 caataaatttggatgtattggtacatca-gtcgttacattaataataaatgagnnnnnnnnnnnatagaaaaataattattttctatcattgacaa 210  Q
    |||||||||||||||||| |||||| || ||||| | ||||||||||||||||           | ||||||||||||||||||||||||||||||    
T  27801830 caataaatttggatgtatcggtacaccaagtcgtaaaattaataataaatgagttgttttttaga-agaaaaataattattttctatcattgacaa 27801924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 216
Target Start/End: Complemental strand, 35534193 - 35534159
Alignment:
Q  182 gaaaaataattattttctatcattgacaattataa 216  Q
    |||||||||||||||| ||||||||||||||||||    
T  35534193 gaaaaataattattttttatcattgacaattataa 35534159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 210
Target Start/End: Original strand, 41321089 - 41321119
Alignment:
Q  180 tagaaaaataattattttctatcattgacaa 210  Q
    |||||||||||||||||||||||||||||||    
T  41321089 tagaaaaataattattttctatcattgacaa 41321119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 210
Target Start/End: Complemental strand, 52274106 - 52274012
Alignment:
Q  116 caataaatttggatgtattggtacatca-gtcgttacattaataataaatgagnnnnnnnnnnnatagaaaaataattattttctatcattgacaa 210  Q
    |||||||||||||||||| |||||| || ||||| | ||||||||||||||||           | ||||||||||||||||||||||||||||||    
T  52274106 caataaatttggatgtatcggtacaccaagtcgtaaaattaataataaatgagttgtttttttga-agaaaaataattattttctatcattgacaa 52274012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Complemental strand, 3150507 - 3150478
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  3150507 agaaaaataattattttctatcattgacaa 3150478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Original strand, 5057284 - 5057313
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  5057284 agaaaaataattattttctatcattgacaa 5057313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 5957578 - 5957545
Alignment:
Q  183 aaaaataattattttctatcattgacaattataa 216  Q
    |||||||||||||||||||||||||||| |||||    
T  5957578 aaaaataattattttctatcattgacaactataa 5957545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Complemental strand, 7426982 - 7426953
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  7426982 agaaaaataattattttctatcattgacaa 7426953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Complemental strand, 8569298 - 8569269
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  8569298 agaaaaataattattttctatcattgacaa 8569269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Complemental strand, 9223176 - 9223147
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  9223176 agaaaaataattattttctatcattgacaa 9223147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Original strand, 10061242 - 10061271
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  10061242 agaaaaataattattttctatcattgacaa 10061271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Complemental strand, 10635718 - 10635689
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  10635718 agaaaaataattattttctatcattgacaa 10635689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 12227209 - 12227242
Alignment:
Q  183 aaaaataattattttctatcattgacaattataa 216  Q
    ||||||||||||||||||||||||| ||||||||    
T  12227209 aaaaataattattttctatcattgataattataa 12227242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Original strand, 14190975 - 14191004
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  14190975 agaaaaataattattttctatcattgacaa 14191004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Original strand, 17376440 - 17376469
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  17376440 agaaaaataattattttctatcattgacaa 17376469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 24677872 - 24677839
Alignment:
Q  183 aaaaataattattttctatcattgacaattataa 216  Q
    ||||||||||||||||||| ||||||||||||||    
T  24677872 aaaaataattattttctattattgacaattataa 24677839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Original strand, 25493583 - 25493612
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  25493583 agaaaaataattattttctatcattgacaa 25493612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Original strand, 27038628 - 27038657
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  27038628 agaaaaataattattttctatcattgacaa 27038657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Original strand, 29171250 - 29171279
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  29171250 agaaaaataattattttctatcattgacaa 29171279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Complemental strand, 31016189 - 31016160
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  31016189 agaaaaataattattttctatcattgacaa 31016160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Complemental strand, 31571291 - 31571262
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  31571291 agaaaaataattattttctatcattgacaa 31571262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 33082075 - 33082108
Alignment:
Q  183 aaaaataattattttctatcattgacaattataa 216  Q
    ||||||||||||||||||||||||| ||||||||    
T  33082075 aaaaataattattttctatcattgataattataa 33082108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Complemental strand, 33829187 - 33829158
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  33829187 agaaaaataattattttctatcattgacaa 33829158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Original strand, 33838779 - 33838808
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  33838779 agaaaaataattattttctatcattgacaa 33838808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Complemental strand, 37765575 - 37765546
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  37765575 agaaaaataattattttctatcattgacaa 37765546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Original strand, 39853042 - 39853071
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  39853042 agaaaaataattattttctatcattgacaa 39853071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Original strand, 40850106 - 40850135
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  40850106 agaaaaataattattttctatcattgacaa 40850135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Complemental strand, 43224967 - 43224938
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  43224967 agaaaaataattattttctatcattgacaa 43224938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Complemental strand, 44647567 - 44647538
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  44647567 agaaaaataattattttctatcattgacaa 44647538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 47458611 - 47458644
Alignment:
Q  183 aaaaataattattttctatcattgacaattataa 216  Q
    ||||||||||||||| ||||||||||||||||||    
T  47458611 aaaaataattattttttatcattgacaattataa 47458644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Original strand, 48480935 - 48480964
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  48480935 agaaaaataattattttctatcattgacaa 48480964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 50534204 - 50534171
Alignment:
Q  183 aaaaataattattttctatcattgacaattataa 216  Q
    |||||||||||||||||||||||||||| |||||    
T  50534204 aaaaataattattttctatcattgacaactataa 50534171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 167
Target Start/End: Complemental strand, 9260203 - 9260151
Alignment:
Q  116 caataaatttggatgtattggtacatc-agtcgttacattaataataaatgag 167  Q
    |||| ||||||||||||| |||||||| |||||| | ||||||||||||||||    
T  9260203 caatgaatttggatgtatcggtacatcaagtcgtaaaattaataataaatgag 9260151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 167
Target Start/End: Original strand, 46872389 - 46872441
Alignment:
Q  116 caataaatttggatgtattggtacatc-agtcgttacattaataataaatgag 167  Q
    |||||||||||| |||||||||||| | |||||| | ||||||||||||||||    
T  46872389 caataaatttgggtgtattggtacaccaagtcgtaaaattaataataaatgag 46872441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 35; Significance: 0.0000000001; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 182 - 216
Target Start/End: Complemental strand, 10118565 - 10118531
Alignment:
Q  182 gaaaaataattattttctatcattgacaattataa 216  Q
    |||||||||||||||||||||||||||||||||||    
T  10118565 gaaaaataattattttctatcattgacaattataa 10118531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 2011378 - 2011345
Alignment:
Q  183 aaaaataattattttctatcattgacaattataa 216  Q
    ||||||||||||||||||||||||||||||||||    
T  2011378 aaaaataattattttctatcattgacaattataa 2011345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 9499314 - 9499347
Alignment:
Q  183 aaaaataattattttctatcattgacaattataa 216  Q
    ||||||||||||||||||||||||||||||||||    
T  9499314 aaaaataattattttctatcattgacaattataa 9499347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 9499474 - 9499507
Alignment:
Q  183 aaaaataattattttctatcattgacaattataa 216  Q
    ||||||||||||||||||||||||||||||||||    
T  9499474 aaaaataattattttctatcattgacaattataa 9499507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 16602682 - 16602649
Alignment:
Q  183 aaaaataattattttctatcattgacaattataa 216  Q
    ||||||||||||||||||||||||||||||||||    
T  16602682 aaaaataattattttctatcattgacaattataa 16602649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 18480154 - 18480187
Alignment:
Q  183 aaaaataattattttctatcattgacaattataa 216  Q
    ||||||||||||||||||||||||||||||||||    
T  18480154 aaaaataattattttctatcattgacaattataa 18480187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 167
Target Start/End: Complemental strand, 31236976 - 31236924
Alignment:
Q  116 caataaatttggatgtattggtacatc-agtcgttacattaataataaatgag 167  Q
    |||||||||||||||||| |||||||| |||||| | ||||||||||||||||    
T  31236976 caataaatttggatgtatcggtacatcaagtcgtaaaattaataataaatgag 31236924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 216
Target Start/End: Complemental strand, 4039793 - 4039758
Alignment:
Q  181 agaaaaataattattttctatcattgacaattataa 216  Q
    ||||||| ||||||||||||||||||||||||||||    
T  4039793 agaaaaagaattattttctatcattgacaattataa 4039758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 216
Target Start/End: Original strand, 32624261 - 32624296
Alignment:
Q  181 agaaaaataattattttctatcattgacaattataa 216  Q
    |||||||||||||||||||||||||||||| |||||    
T  32624261 agaaaaataattattttctatcattgacaactataa 32624296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 216
Target Start/End: Original strand, 35162435 - 35162470
Alignment:
Q  181 agaaaaataattattttctatcattgacaattataa 216  Q
    ||||||||||||||||| ||||||||||||||||||    
T  35162435 agaaaaataattattttttatcattgacaattataa 35162470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 210
Target Start/End: Original strand, 16729744 - 16729838
Alignment:
Q  116 caataaatttggatgtattggtacatca-gtcgttacattaataataaatgagnnnnnnnnnnnatagaaaaataattattttctatcattgacaa 210  Q
    |||||||||||||||||| |||||| || ||||| | ||||||||||||||||           | ||||||||||||||||||||||||||||||    
T  16729744 caataaatttggatgtatcggtacaccaagtcgtaaaattaataataaatgagttatttttttga-agaaaaataattattttctatcattgacaa 16729838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 210
Target Start/End: Complemental strand, 23189454 - 23189360
Alignment:
Q  116 caataaatttggatgtattggtacatca-gtcgttacattaataataaatgagnnnnnnnnnnnatagaaaaataattattttctatcattgacaa 210  Q
    |||||||||||| ||||| ||||||||| ||||| | ||||||||||||||||           | ||||||||||||||||||||||||||||||    
T  23189454 caataaatttgggtgtatcggtacatcaagtcgtaaaattaataataaatgagttgtttttttga-agaaaaataattattttctatcattgacaa 23189360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Complemental strand, 2148448 - 2148419
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  2148448 agaaaaataattattttctatcattgacaa 2148419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Original strand, 3881916 - 3881945
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  3881916 agaaaaataattattttctatcattgacaa 3881945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 6335477 - 6335510
Alignment:
Q  183 aaaaataattattttctatcattgacaattataa 216  Q
    |||||||||||||||||||||||||||| |||||    
T  6335477 aaaaataattattttctatcattgacaactataa 6335510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Original strand, 9530447 - 9530476
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  9530447 agaaaaataattattttctatcattgacaa 9530476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 12336300 - 12336333
Alignment:
Q  183 aaaaataattattttctatcattgacaattataa 216  Q
    |||||||||||||||||||||||||||| |||||    
T  12336300 aaaaataattattttctatcattgacaactataa 12336333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Complemental strand, 13589186 - 13589157
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  13589186 agaaaaataattattttctatcattgacaa 13589157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 13593601 - 13593568
Alignment:
Q  183 aaaaataattattttctatcattgacaattataa 216  Q
    |||||||||||||||||||||||||||| |||||    
T  13593601 aaaaataattattttctatcattgacaactataa 13593568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Original strand, 15726030 - 15726059
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  15726030 agaaaaataattattttctatcattgacaa 15726059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Original strand, 19125997 - 19126026
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  19125997 agaaaaataattattttctatcattgacaa 19126026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 19238880 - 19238913
Alignment:
Q  183 aaaaataattattttctatcattgacaattataa 216  Q
    |||||||||||||||||||||||||| |||||||    
T  19238880 aaaaataattattttctatcattgactattataa 19238913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Original strand, 25684158 - 25684187
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  25684158 agaaaaataattattttctatcattgacaa 25684187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Complemental strand, 28770268 - 28770239
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  28770268 agaaaaataattattttctatcattgacaa 28770239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 29666140 - 29666107
Alignment:
Q  183 aaaaataattattttctatcattgacaattataa 216  Q
    ||||| ||||||||||||||||||||||||||||    
T  29666140 aaaaaaaattattttctatcattgacaattataa 29666107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Complemental strand, 33001769 - 33001740
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  33001769 agaaaaataattattttctatcattgacaa 33001740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 212
Target Start/End: Original strand, 36409994 - 36410023
Alignment:
Q  183 aaaaataattattttctatcattgacaatt 212  Q
    ||||||||||||||||||||||||||||||    
T  36409994 aaaaataattattttctatcattgacaatt 36410023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Complemental strand, 37314159 - 37314130
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  37314159 agaaaaataattattttctatcattgacaa 37314130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Complemental strand, 39541041 - 39541012
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  39541041 agaaaaataattattttctatcattgacaa 39541012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Original strand, 40340513 - 40340542
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  40340513 agaaaaataattattttctatcattgacaa 40340542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Complemental strand, 42534715 - 42534686
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  42534715 agaaaaataattattttctatcattgacaa 42534686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Complemental strand, 43411838 - 43411809
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  43411838 agaaaaataattattttctatcattgacaa 43411809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 35; Significance: 0.0000000001; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 210
Target Start/End: Complemental strand, 42244924 - 42244830
Alignment:
Q  116 caataaatttggatgtattggtacatc-agtcgttacattaataataaatgagnnnnnnnnnnnatagaaaaataattattttctatcattgacaa 210  Q
    |||||||||||||||||| |||||||| |||||| | ||||||||||||||||           | ||||||||||||||||||||||||||||||    
T  42244924 caataaatttggatgtatcggtacatcaagtcgtaaaattaataataaatgagttgtttttttga-agaaaaataattattttctatcattgacaa 42244830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 1792147 - 1792114
Alignment:
Q  183 aaaaataattattttctatcattgacaattataa 216  Q
    ||||||||||||||||||||||||||||||||||    
T  1792147 aaaaataattattttctatcattgacaattataa 1792114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 6882853 - 6882820
Alignment:
Q  183 aaaaataattattttctatcattgacaattataa 216  Q
    ||||||||||||||||||||||||||||||||||    
T  6882853 aaaaataattattttctatcattgacaattataa 6882820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 17370596 - 17370563
Alignment:
Q  183 aaaaataattattttctatcattgacaattataa 216  Q
    ||||||||||||||||||||||||||||||||||    
T  17370596 aaaaataattattttctatcattgacaattataa 17370563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 32882354 - 32882387
Alignment:
Q  183 aaaaataattattttctatcattgacaattataa 216  Q
    ||||||||||||||||||||||||||||||||||    
T  32882354 aaaaataattattttctatcattgacaattataa 32882387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 48207164 - 48207197
Alignment:
Q  183 aaaaataattattttctatcattgacaattataa 216  Q
    ||||||||||||||||||||||||||||||||||    
T  48207164 aaaaataattattttctatcattgacaattataa 48207197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 52415059 - 52415092
Alignment:
Q  183 aaaaataattattttctatcattgacaattataa 216  Q
    ||||||||||||||||||||||||||||||||||    
T  52415059 aaaaataattattttctatcattgacaattataa 52415092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 216
Target Start/End: Original strand, 27635824 - 27635859
Alignment:
Q  181 agaaaaataattattttctatcattgacaattataa 216  Q
    |||||||||||||||||||||||||||||| |||||    
T  27635824 agaaaaataattattttctatcattgacaactataa 27635859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 216
Target Start/End: Complemental strand, 42080649 - 42080614
Alignment:
Q  181 agaaaaataattattttctatcattgacaattataa 216  Q
    |||||||||||||||||||||||||||||| |||||    
T  42080649 agaaaaataattattttctatcattgacaactataa 42080614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 216
Target Start/End: Complemental strand, 54505887 - 54505852
Alignment:
Q  181 agaaaaataattattttctatcattgacaattataa 216  Q
    |||||||||||||||||||||||||||||| |||||    
T  54505887 agaaaaataattattttctatcattgacaactataa 54505852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 210
Target Start/End: Complemental strand, 46633991 - 46633896
Alignment:
Q  116 caataaatttggatgtattggtacatca-gtcgttacattaataataaatgagnnnnnnnnnnnatagaaaaataattattttctatcattgacaa 210  Q
    |||||||||||||||||| |||||| || ||||| | ||||||||||||||||             ||||||||||||||||||||||||||||||    
T  46633991 caataaatttggatgtatcggtacaccaagtcgtaaaattaataataaatgagttgttttttttgaagaaaaataattattttctatcattgacaa 46633896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 210
Target Start/End: Complemental strand, 48550053 - 48549959
Alignment:
Q  116 caataaatttggatgtattggtacatca-gtcgttacattaataataaatgagnnnnnnnnnnnatagaaaaataattattttctatcattgacaa 210  Q
    |||||||||||||||||| |||||| || ||||| | ||||||||||||||||           | ||||||||||||||||||||||||||||||    
T  48550053 caataaatttggatgtatcggtacaccaagtcgtaaaattaataataaatgagttgttttttaga-agaaaaataattattttctatcattgacaa 48549959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 215
Target Start/End: Original strand, 56016881 - 56016915
Alignment:
Q  181 agaaaaataattattttctatcattgacaattata 215  Q
    |||||||||||||||||||||||||||||| ||||    
T  56016881 agaaaaataattattttctatcattgacaactata 56016915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 3690596 - 3690629
Alignment:
Q  183 aaaaataattattttctatcattgacaattataa 216  Q
    ||||||||||||||| ||||||||||||||||||    
T  3690596 aaaaataattattttttatcattgacaattataa 3690629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Complemental strand, 10779313 - 10779284
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  10779313 agaaaaataattattttctatcattgacaa 10779284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Complemental strand, 16004855 - 16004826
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  16004855 agaaaaataattattttctatcattgacaa 16004826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 19627686 - 19627719
Alignment:
Q  183 aaaaataattattttctatcattgacaattataa 216  Q
    ||||||||||||||||||||||| ||||||||||    
T  19627686 aaaaataattattttctatcattaacaattataa 19627719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Complemental strand, 23639557 - 23639528
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  23639557 agaaaaataattattttctatcattgacaa 23639528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Original strand, 24292062 - 24292091
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  24292062 agaaaaataattattttctatcattgacaa 24292091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 25684414 - 25684381
Alignment:
Q  183 aaaaataattattttctatcattgacaattataa 216  Q
    ||||||||||| ||||||||||||||||||||||    
T  25684414 aaaaataattagtttctatcattgacaattataa 25684381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 30168418 - 30168385
Alignment:
Q  183 aaaaataattattttctatcattgacaattataa 216  Q
    ||||| ||||||||||||||||||||||||||||    
T  30168418 aaaaagaattattttctatcattgacaattataa 30168385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Original strand, 33612608 - 33612637
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  33612608 agaaaaataattattttctatcattgacaa 33612637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Original strand, 36569733 - 36569762
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  36569733 agaaaaataattattttctatcattgacaa 36569762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Complemental strand, 38955364 - 38955335
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  38955364 agaaaaataattattttctatcattgacaa 38955335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Original strand, 44998495 - 44998524
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  44998495 agaaaaataattattttctatcattgacaa 44998524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Original strand, 45629193 - 45629222
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  45629193 agaaaaataattattttctatcattgacaa 45629222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Complemental strand, 46630967 - 46630938
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  46630967 agaaaaataattattttctatcattgacaa 46630938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Original strand, 54499659 - 54499688
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  54499659 agaaaaataattattttctatcattgacaa 54499688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 167
Target Start/End: Original strand, 24291998 - 24292050
Alignment:
Q  116 caataaatttggatgtattggtacatc-agtcgttacattaataataaatgag 167  Q
    |||||||||||| |||||||||||| | |||||| | ||||||||||||||||    
T  24291998 caataaatttgggtgtattggtacaccaagtcgtaaaattaataataaatgag 24292050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 216
Target Start/End: Original strand, 46688188 - 46688220
Alignment:
Q  184 aaaataattattttctatcattgacaattataa 216  Q
    |||| ||||||||||||||||||||||||||||    
T  46688188 aaaaaaattattttctatcattgacaattataa 46688220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 213
Target Start/End: Original strand, 52940566 - 52940598
Alignment:
Q  181 agaaaaataattattttctatcattgacaatta 213  Q
    |||||||||||| ||||||||||||||||||||    
T  52940566 agaaaaataattgttttctatcattgacaatta 52940598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 35; Significance: 0.0000000001; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 182 - 216
Target Start/End: Original strand, 43359189 - 43359223
Alignment:
Q  182 gaaaaataattattttctatcattgacaattataa 216  Q
    |||||||||||||||||||||||||||||||||||    
T  43359189 gaaaaataattattttctatcattgacaattataa 43359223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 4108393 - 4108426
Alignment:
Q  183 aaaaataattattttctatcattgacaattataa 216  Q
    ||||||||||||||||||||||||||||||||||    
T  4108393 aaaaataattattttctatcattgacaattataa 4108426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 7069280 - 7069313
Alignment:
Q  183 aaaaataattattttctatcattgacaattataa 216  Q
    ||||||||||||||||||||||||||||||||||    
T  7069280 aaaaataattattttctatcattgacaattataa 7069313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 7366593 - 7366626
Alignment:
Q  183 aaaaataattattttctatcattgacaattataa 216  Q
    ||||||||||||||||||||||||||||||||||    
T  7366593 aaaaataattattttctatcattgacaattataa 7366626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 16718722 - 16718755
Alignment:
Q  183 aaaaataattattttctatcattgacaattataa 216  Q
    ||||||||||||||||||||||||||||||||||    
T  16718722 aaaaataattattttctatcattgacaattataa 16718755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 28318361 - 28318328
Alignment:
Q  183 aaaaataattattttctatcattgacaattataa 216  Q
    ||||||||||||||||||||||||||||||||||    
T  28318361 aaaaataattattttctatcattgacaattataa 28318328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 33429219 - 33429252
Alignment:
Q  183 aaaaataattattttctatcattgacaattataa 216  Q
    ||||||||||||||||||||||||||||||||||    
T  33429219 aaaaataattattttctatcattgacaattataa 33429252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 36428827 - 36428794
Alignment:
Q  183 aaaaataattattttctatcattgacaattataa 216  Q
    ||||||||||||||||||||||||||||||||||    
T  36428827 aaaaataattattttctatcattgacaattataa 36428794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 213
Target Start/End: Original strand, 41839739 - 41839771
Alignment:
Q  181 agaaaaataattattttctatcattgacaatta 213  Q
    |||||||||||||||||||||||||||||||||    
T  41839739 agaaaaataattattttctatcattgacaatta 41839771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 216
Target Start/End: Complemental strand, 11986512 - 11986477
Alignment:
Q  181 agaaaaataattattttctatcattgacaattataa 216  Q
    ||||||||||||||||| ||||||||||||||||||    
T  11986512 agaaaaataattattttttatcattgacaattataa 11986477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 216
Target Start/End: Complemental strand, 19268885 - 19268850
Alignment:
Q  181 agaaaaataattattttctatcattgacaattataa 216  Q
    ||||||| ||||||||||||||||||||||||||||    
T  19268885 agaaaaagaattattttctatcattgacaattataa 19268850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 216
Target Start/End: Original strand, 21425297 - 21425332
Alignment:
Q  181 agaaaaataattattttctatcattgacaattataa 216  Q
    |||||||||||||||||||||||||||||| |||||    
T  21425297 agaaaaataattattttctatcattgacaactataa 21425332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 216
Target Start/End: Complemental strand, 33716616 - 33716581
Alignment:
Q  181 agaaaaataattattttctatcattgacaattataa 216  Q
    |||||||||||||||||||||||||||||| |||||    
T  33716616 agaaaaataattattttctatcattgacaactataa 33716581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 216
Target Start/End: Complemental strand, 37425536 - 37425501
Alignment:
Q  181 agaaaaataattattttctatcattgacaattataa 216  Q
    ||||||||||||||||||||||||| ||||||||||    
T  37425536 agaaaaataattattttctatcatttacaattataa 37425501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 216
Target Start/End: Complemental strand, 2283480 - 2283450
Alignment:
Q  186 aataattattttctatcattgacaattataa 216  Q
    |||||||||||||||||||||||||||||||    
T  2283480 aataattattttctatcattgacaattataa 2283450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 210
Target Start/End: Original strand, 45555402 - 45555496
Alignment:
Q  116 caataaatttggatgtattggtacatca-gtcgttacattaataataaatgagnnnnnnnnnnnatagaaaaataattattttctatcattgacaa 210  Q
    |||||||||||||||||| |||||| || ||||| | ||||||||||||||||           | ||||||||||||||||||||||||||||||    
T  45555402 caataaatttggatgtatcggtacaccaagtcgtaaaattaataataaatgagttttttttttga-agaaaaataattattttctatcattgacaa 45555496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Complemental strand, 490056 - 490027
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  490056 agaaaaataattattttctatcattgacaa 490027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Original strand, 1860012 - 1860041
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  1860012 agaaaaataattattttctatcattgacaa 1860041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Complemental strand, 2317160 - 2317131
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  2317160 agaaaaataattattttctatcattgacaa 2317131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Complemental strand, 3724263 - 3724234
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  3724263 agaaaaataattattttctatcattgacaa 3724234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Complemental strand, 5085161 - 5085132
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  5085161 agaaaaataattattttctatcattgacaa 5085132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Original strand, 6657528 - 6657557
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  6657528 agaaaaataattattttctatcattgacaa 6657557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Complemental strand, 7504345 - 7504316
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  7504345 agaaaaataattattttctatcattgacaa 7504316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 8504346 - 8504313
Alignment:
Q  183 aaaaataattattttctatcattgacaattataa 216  Q
    ||||| ||||||||||||||||||||||||||||    
T  8504346 aaaaaaaattattttctatcattgacaattataa 8504313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Complemental strand, 16815172 - 16815143
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  16815172 agaaaaataattattttctatcattgacaa 16815143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Complemental strand, 18009276 - 18009247
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  18009276 agaaaaataattattttctatcattgacaa 18009247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Original strand, 26738117 - 26738146
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  26738117 agaaaaataattattttctatcattgacaa 26738146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Original strand, 28394155 - 28394184
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  28394155 agaaaaataattattttctatcattgacaa 28394184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Complemental strand, 33424054 - 33424025
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  33424054 agaaaaataattattttctatcattgacaa 33424025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Complemental strand, 36192292 - 36192263
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  36192292 agaaaaataattattttctatcattgacaa 36192263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Complemental strand, 36947804 - 36947775
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  36947804 agaaaaataattattttctatcattgacaa 36947775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Original strand, 37725636 - 37725665
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  37725636 agaaaaataattattttctatcattgacaa 37725665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Complemental strand, 39879241 - 39879212
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  39879241 agaaaaataattattttctatcattgacaa 39879212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Original strand, 40533336 - 40533365
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  40533336 agaaaaataattattttctatcattgacaa 40533365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 41184573 - 41184606
Alignment:
Q  183 aaaaataattattttctatcattgacaattataa 216  Q
    ||||||||||||||||||||||| ||||||||||    
T  41184573 aaaaataattattttctatcattaacaattataa 41184606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 210
Target Start/End: Complemental strand, 18576621 - 18576593
Alignment:
Q  182 gaaaaataattattttctatcattgacaa 210  Q
    |||||||||||||||||||||||||||||    
T  18576621 gaaaaataattattttctatcattgacaa 18576593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 167
Target Start/End: Complemental strand, 18576698 - 18576646
Alignment:
Q  116 caataaatttggatgtattggtacatc-agtcgttacattaataataaatgag 167  Q
    |||||||||||| |||||||||||| | |||||| | ||||||||||||||||    
T  18576698 caataaatttgggtgtattggtacaccaagtcgtaaaattaataataaatgag 18576646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 167
Target Start/End: Original strand, 35292530 - 35292582
Alignment:
Q  116 caataaatttggatgtattggtacatc-agtcgttacattaataataaatgag 167  Q
    |||||||||||||||||| |||||| | |||||| | ||||||||||||||||    
T  35292530 caataaatttggatgtatcggtacaccaagtcgtaaaattaataataaatgag 35292582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0325 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 1533 - 1500
Alignment:
Q  183 aaaaataattattttctatcattgacaattataa 216  Q
    ||||||||||||||||||||||||||||||||||    
T  1533 aaaaataattattttctatcattgacaattataa 1500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 34; Significance: 0.0000000004; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 926627 - 926660
Alignment:
Q  183 aaaaataattattttctatcattgacaattataa 216  Q
    ||||||||||||||||||||||||||||||||||    
T  926627 aaaaataattattttctatcattgacaattataa 926660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 6295464 - 6295497
Alignment:
Q  183 aaaaataattattttctatcattgacaattataa 216  Q
    ||||||||||||||||||||||||||||||||||    
T  6295464 aaaaataattattttctatcattgacaattataa 6295497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 22084909 - 22084942
Alignment:
Q  183 aaaaataattattttctatcattgacaattataa 216  Q
    ||||||||||||||||||||||||||||||||||    
T  22084909 aaaaataattattttctatcattgacaattataa 22084942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 216
Target Start/End: Complemental strand, 14872647 - 14872613
Alignment:
Q  182 gaaaaataattattttctatcattgacaattataa 216  Q
    ||||||||| |||||||||||||||||||||||||    
T  14872647 gaaaaataaatattttctatcattgacaattataa 14872613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 2138436 - 2138469
Alignment:
Q  183 aaaaataattattttctatcattgacaattataa 216  Q
    ||||||||||||||||||||||||| ||||||||    
T  2138436 aaaaataattattttctatcattgataattataa 2138469  T

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Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 3954224 - 3954191
Alignment:
Q  183 aaaaataattattttctatcattgacaattataa 216  Q
    ||||| ||||||||||||||||||||||||||||    
T  3954224 aaaaagaattattttctatcattgacaattataa 3954191  T

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Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Complemental strand, 6016126 - 6016097
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  6016126 agaaaaataattattttctatcattgacaa 6016097  T

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Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 11273736 - 11273703
Alignment:
Q  183 aaaaataattattttctatcattgacaattataa 216  Q
    |||||||||||||||||||||||||||| |||||    
T  11273736 aaaaataattattttctatcattgacaactataa 11273703  T

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Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 14501112 - 14501145
Alignment:
Q  183 aaaaataattattttctatcattgacaattataa 216  Q
    ||||||||||||||| ||||||||||||||||||    
T  14501112 aaaaataattattttttatcattgacaattataa 14501145  T

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Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 14715586 - 14715553
Alignment:
Q  183 aaaaataattattttctatcattgacaattataa 216  Q
    |||||||||||||||||||||||||||| |||||    
T  14715586 aaaaataattattttctatcattgacaactataa 14715553  T

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Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Complemental strand, 16989434 - 16989405
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  16989434 agaaaaataattattttctatcattgacaa 16989405  T

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Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 21998700 - 21998733
Alignment:
Q  183 aaaaataattattttctatcattgacaattataa 216  Q
    |||||||| |||||||||||||||||||||||||    
T  21998700 aaaaataactattttctatcattgacaattataa 21998733  T

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Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 24151445 - 24151412
Alignment:
Q  183 aaaaataattattttctatcattgacaattataa 216  Q
    |||||||||||||||||||||||||||| |||||    
T  24151445 aaaaataattattttctatcattgacaactataa 24151412  T

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Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Original strand, 26810862 - 26810891
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  26810862 agaaaaataattattttctatcattgacaa 26810891  T

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Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Complemental strand, 27719326 - 27719297
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  27719326 agaaaaataattattttctatcattgacaa 27719297  T

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Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Complemental strand, 32519054 - 32519025
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  32519054 agaaaaataattattttctatcattgacaa 32519025  T

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Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Original strand, 33954536 - 33954565
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  33954536 agaaaaataattattttctatcattgacaa 33954565  T

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Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Complemental strand, 34315446 - 34315417
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  34315446 agaaaaataattattttctatcattgacaa 34315417  T

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Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Original strand, 34969537 - 34969566
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  34969537 agaaaaataattattttctatcattgacaa 34969566  T

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Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Complemental strand, 35225152 - 35225123
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  35225152 agaaaaataattattttctatcattgacaa 35225123  T

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Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 210
Target Start/End: Original strand, 1338940 - 1338968
Alignment:
Q  182 gaaaaataattattttctatcattgacaa 210  Q
    |||||||||||||||||||||||||||||    
T  1338940 gaaaaataattattttctatcattgacaa 1338968  T

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Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 210
Target Start/End: Original strand, 18871009 - 18871037
Alignment:
Q  182 gaaaaataattattttctatcattgacaa 210  Q
    |||||||||||||||||||||||||||||    
T  18871009 gaaaaataattattttctatcattgacaa 18871037  T

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Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 213
Target Start/End: Original strand, 21181224 - 21181256
Alignment:
Q  181 agaaaaataattattttctatcattgacaatta 213  Q
    |||||||||||| ||||||||||||||||||||    
T  21181224 agaaaaataattgttttctatcattgacaatta 21181256  T

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Target: scaffold0072 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 216
Target Start/End: Complemental strand, 47896 - 47862
Alignment:
Q  182 gaaaaataattattttctatcattgacaattataa 216  Q
    |||||||||||||||| ||||||||||||||||||    
T  47896 gaaaaataattattttttatcattgacaattataa 47862  T

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Target: scaffold1999 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1999
Description:

Target: scaffold1999; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Original strand, 1088 - 1117
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  1088 agaaaaataattattttctatcattgacaa 1117  T

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Target: scaffold0493 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0493
Description:

Target: scaffold0493; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Original strand, 1467 - 1496
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  1467 agaaaaataattattttctatcattgacaa 1496  T

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Target: scaffold0349 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Complemental strand, 8748 - 8719
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  8748 agaaaaataattattttctatcattgacaa 8719  T

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Target: scaffold0121 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Original strand, 13688 - 13717
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  13688 agaaaaataattattttctatcattgacaa 13717  T

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Target: scaffold0067 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 41475 - 41508
Alignment:
Q  183 aaaaataattattttctatcattgacaattataa 216  Q
    ||||||||||||||||||||||||| ||||||||    
T  41475 aaaaataattattttctatcattgataattataa 41508  T

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Target: scaffold0022 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Complemental strand, 166739 - 166710
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  166739 agaaaaataattattttctatcattgacaa 166710  T

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Target: scaffold0005 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Original strand, 291708 - 291737
Alignment:
Q  181 agaaaaataattattttctatcattgacaa 210  Q
    ||||||||||||||||||||||||||||||    
T  291708 agaaaaataattattttctatcattgacaa 291737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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