View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17699_low_10 (Length: 320)
Name: NF17699_low_10
Description: NF17699
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17699_low_10 |
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Alignment Details
Target: chr8 (Bit Score: 260; Significance: 1e-145; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 10 - 305
Target Start/End: Complemental strand, 40370482 - 40370190
Alignment:
| Q |
10 |
ataattctggaaacttaaatgaaataaaaattaattctaacttaactgtcagttattgaacagttaagttggaaaataacttatgcagtataa-tattca |
108 |
Q |
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| T |
40370482 |
ataattctggaaacttaactgaaataaaaattaattctaacttaactgtcagttattcaacagttaagttggaaaataacttatgcagtataaatattca |
40370383 |
T |
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| Q |
109 |
gtattttggaagagaatagtttctactctctaagacatcaagtgtgtggggttgttattttggttgtaggcaaaatccagggaatgatgtgttttgtatg |
208 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
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| T |
40370382 |
gtattttggaagagaatagtttctactctctaagacatcaagtgtgtggggttgttattttggtcgtaggcaaaatccagggaatgatgtgttttgtatg |
40370283 |
T |
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| Q |
209 |
atttggtgtgataatcctaaatttcttttgttcaaattagtgttctatcagatattattcagtcttaattatttccttatatttaaattgccattat |
305 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
40370282 |
atttggtgtgataatcctaaatttcttttgttcaaattagtgttctatcagatattattcagtc----ttatttccttatatttaaattgccattat |
40370190 |
T |
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