View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17702_low_5 (Length: 416)
Name: NF17702_low_5
Description: NF17702
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17702_low_5 |
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Alignment Details
Target: chr7 (Bit Score: 392; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 392; E-Value: 0
Query Start/End: Original strand, 1 - 400
Target Start/End: Original strand, 35146014 - 35146413
Alignment:
| Q |
1 |
gaagtctttaccctaaataattgagctggaaaccagaacttgccactctctagtgacaaatagaaagccatcttaaagttatttgacaataataaactct |
100 |
Q |
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| T |
35146014 |
gaagtctttaccctaaataattgagctggaaaccagaacttgccactctctagtgacaaatacaaagccatcttaaagttatttgacaataataaactct |
35146113 |
T |
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| Q |
101 |
taagatgtgtgcattcttcaaaatatgatccaaggcatagcattggccaagcaccactaaaagaaccaagtgatccattctgaatattattgatttgttg |
200 |
Q |
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| T |
35146114 |
taagatgtgtgcattcttcaaaatatgatccaaggcatagcataggccaagcaccactaaaagaaccaagtgatccattctgaatattattgatttgttg |
35146213 |
T |
|
| Q |
201 |
attcaaaacactcccttcctctgctgttattgatgttacatgccattgccactcctttagggcaacatgaccaatgactcttccccacttttgcttcatg |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35146214 |
attcaaaacactcccttcctctgctgttattgatgttacatgccattgccactcctttagggcaacatgaccaatgactcttccccacttttgcttcatg |
35146313 |
T |
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| Q |
301 |
tgaatttcccaaaaatgatcacttctacatttatttcttagacaaatgcatacttcagacattttgatgagttctattggtgaaagacgttcgagaattc |
400 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35146314 |
tgaatttcccaaaaatgatcacttctacatttatttcttagacaaatgcatacttcagacattttgatgagttctattggtgaaagacgttcgagaattc |
35146413 |
T |
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