View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17702_low_9 (Length: 240)
Name: NF17702_low_9
Description: NF17702
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17702_low_9 |
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Alignment Details
Target: chr4 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 11 - 222
Target Start/End: Original strand, 26859421 - 26859632
Alignment:
| Q |
11 |
aatatgaaaatcaaactgcgcaatcaaatttgatatcagaaaatacaatcctacgaaaattaaacaaaaagtaacgattcaattgctctcaaattcatac |
110 |
Q |
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| T |
26859421 |
aatacgaaaatcaaactgcgcaatcaaatttgatatcagaaaatacaatcctacgaaaattaaacaaaaagtaacgattcaattgctctcaaattcatac |
26859520 |
T |
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| Q |
111 |
gaaacgcagatctaagcaattacctcaacggtctaaaccgaatcgtcaccgaaatactatccctcggagtggaagaatccacctcctccaccggagaacc |
210 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26859521 |
gaaacgcagatctaagcaattacctcaacggtctaaaccgaatcgtcaccgaaatactatccctcggagtggaagaatccacctcctccaccggagaacc |
26859620 |
T |
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| Q |
211 |
ataactgtgcac |
222 |
Q |
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|||||||||||| |
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| T |
26859621 |
ataactgtgcac |
26859632 |
T |
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