View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17704_high_29 (Length: 211)
Name: NF17704_high_29
Description: NF17704
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17704_high_29 |
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Alignment Details
Target: chr3 (Bit Score: 180; Significance: 2e-97; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 180; E-Value: 2e-97
Query Start/End: Original strand, 15 - 194
Target Start/End: Original strand, 42849649 - 42849828
Alignment:
| Q |
15 |
aatatagcaggagaaaaattaaataatggaaagtggccacaagagggagaaggagaggatttaaatatagaagatcctaacaatgaccaatcagctatag |
114 |
Q |
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| T |
42849649 |
aatatagcaggagaaaaattaaataatggaaagtggccacaagagggagaaggagaggatttaaatatagaagatcctaacaatgaccaatcagctatag |
42849748 |
T |
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| Q |
115 |
aggataccaaatctgaagtggacacaacagaaggtactacaacaaaaaatgcaagcaatgagattgtagatacattagat |
194 |
Q |
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| T |
42849749 |
aggataccaaatctgaagtggacacaacagaaggtactacaacaaaaaatgcaagcaatgagattgtagatacattagat |
42849828 |
T |
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