View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF17705_low_13 (Length: 343)
Name: NF17705_low_13
Description: NF17705
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17705_low_13 |
 |  |
|
| [»] chr3 (14 HSPs) |
 |  |
|
Alignment Details
Target: chr3 (Bit Score: 285; Significance: 1e-160; HSPs: 14)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 285; E-Value: 1e-160
Query Start/End: Original strand, 11 - 343
Target Start/End: Complemental strand, 22367856 - 22367524
Alignment:
| Q |
11 |
agaaaatcttatagatatatcttccaaaattgttgaaaaatgcaatggattaccactcgcaattgtagtcattggtggtattttagcttgcaaagatagg |
110 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22367856 |
agaaaatcttattgatatatcttccaaaattgttgaaaaatgcaatggattaccactcgcaattgtagtcattggtggtattttagcttgcaaagatagg |
22367757 |
T |
 |
| Q |
111 |
aatccaattgaatggtctaagtttagtgaaaatataaatgcagatctgtcaaaggaatattccatgatnnnnnnnnttctaggacttagttaccatgatt |
210 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
22367756 |
aatccaattgaatggtctaagtttagtgaaaatataaatgcagatcagtcaaaggaatattccatgataaaaaaaattctaggacttagttaccatgatt |
22367657 |
T |
 |
| Q |
211 |
tgccttgcaacctcaagtaatgtttcttgtattttggattatatcctgaagactctaatgttcgttcaaatatattgactcatcaatggattgctgaagg |
310 |
Q |
| |
|
|||||||||||||||||| |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
22367656 |
tgccttgcaacctcaagtcatgtttcttgtactttggattatatcctgaagactcaaatgttcgttcaaatatattgactcgtcaatggattgctgaagg |
22367557 |
T |
 |
| Q |
311 |
gtttgtgaaagaagaaaggggaatgacattgga |
343 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |
|
|
| T |
22367556 |
gtttgtgaaagaagaaaggggaatgacattgga |
22367524 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 11 - 341
Target Start/End: Complemental strand, 22431102 - 22430772
Alignment:
| Q |
11 |
agaaaatcttatagatatatcttccaaaattgttgaaaaatgcaatggattaccactcgcaattgtagtcattggtggtattttagcttgcaaagatagg |
110 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22431102 |
agaaaatcttatagatatatcttccaaaattgttgaaaaatgcaatggattaccactcgcaattgtagtcattggtggtattttagcttgcaaagatagg |
22431003 |
T |
 |
| Q |
111 |
aatccaattgaatggtctaagtttagtgaaaatataaatgcagatctgtcaaaggaatattccatgatnnnnnnnnttctaggacttagttaccatgatt |
210 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| | |||| ||| || | |||| | ||||||||||||||||||||| |
|
|
| T |
22431002 |
aatccaattgaatggtctaagtttagtgaaaatataaatgcagatcaggcaaatgaaaatcctgtgataagaaaaactttaggacttagttaccatgatt |
22430903 |
T |
 |
| Q |
211 |
tgccttgcaacctcaagtaatgtttcttgtattttggattatatcctgaagactctaatgttcgttcaaatatattgactcatcaatggattgctgaagg |
310 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||||||||||| |||||| || ||| |||||| | ||| ||| |||||||||||||||||| |
|
|
| T |
22430902 |
tgccttgcaacctcaagtcatgtttcttgtattttggattatatcctaaagactatatagtttattcaaagacattaacttgtcaatggattgctgaagg |
22430803 |
T |
 |
| Q |
311 |
gtttgtgaaagaagaaaggggaatgacattg |
341 |
Q |
| |
|
||||||||||||| ||| ||||| ||||||| |
|
|
| T |
22430802 |
gtttgtgaaagaaaaaacgggaaggacattg |
22430772 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 183; E-Value: 6e-99
Query Start/End: Original strand, 13 - 343
Target Start/End: Complemental strand, 22436561 - 22436231
Alignment:
| Q |
13 |
aaaatcttatagatatatcttccaaaattgttgaaaaatgcaatggattaccactcgcaattgtagtcattggtggtattttagcttgcaaagataggaa |
112 |
Q |
| |
|
|||||||||| ||||||||||||||||||||| |||||||||| |||||||| || ||||||||||||| ||||||| ||||| ||||||||||||| || |
|
|
| T |
22436561 |
aaaatcttattgatatatcttccaaaattgttaaaaaatgcaaaggattacctctagcaattgtagtcactggtggtcttttatcttgcaaagatagaaa |
22436462 |
T |
 |
| Q |
113 |
tccaattgaatggtctaagtttagtgaaaatataaatgcagatctgtcaaaggaatattccatgatnnnnnnnnttctaggacttagttaccatgatttg |
212 |
Q |
| |
|
||| | |||||||| |||||||||||||||||||||||||||| |||||| ||||||||||| || |||||||| ||||||||||||||||| |
|
|
| T |
22436461 |
tcctactgaatggtacaagtttagtgaaaatataaatgcagatcagtcaaatgaatattccataataagaaaaattctaggatttagttaccatgatttg |
22436362 |
T |
 |
| Q |
213 |
ccttgcaacctcaagtaatgtttcttgtattttggattatatcctgaagactctaatgttcgttcaaatatattgactcatcaatggattgctgaagggt |
312 |
Q |
| |
|
|||| | ||||||||| |||||||||||||||||||||||||||||||||| || ||||||||||| | |||||||| ||||||||||||||||||| |
|
|
| T |
22436361 |
ccttactacctcaagtcgtgtttcttgtattttggattatatcctgaagactatatagttcgttcaaaaacattgactcgccaatggattgctgaagggt |
22436262 |
T |
 |
| Q |
313 |
ttgtgaaagaagaaaggggaatgacattgga |
343 |
Q |
| |
|
| ||||||||||| ||||||| ||||||||| |
|
|
| T |
22436261 |
tcgtgaaagaagagaggggaaggacattgga |
22436231 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 13 - 323
Target Start/End: Complemental strand, 22442672 - 22442362
Alignment:
| Q |
13 |
aaaatcttatagatatatcttccaaaattgttgaaaaatgcaatggattaccactcgcaattgtagtcattggtggtattttagcttgcaaagataggaa |
112 |
Q |
| |
|
|||||||||| | |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| || |
|
|
| T |
22442672 |
aaaatcttattggtatatcttccaaaattgttgaaaaatgcaatggattaccactagcaattgtagtcattggtggtattttagctcccaaagatagaaa |
22442573 |
T |
 |
| Q |
113 |
tccaattgaatggtctaagtttagtgaaaatataaatgcagatctgtcaaaggaatattccatgatnnnnnnnnttctaggacttagttaccatgatttg |
212 |
Q |
| |
|
| |||||||||||| | |||||| |||||||||||||||||||| || |||||||||||||| | || ||||||| ||||||||||||||| |
|
|
| T |
22442572 |
tacaattgaatggtatgagtttaatgaaaatataaatgcagatcagtttaaggaatattccatagtaagaaaaattttaggactcagttaccatgatttg |
22442473 |
T |
 |
| Q |
213 |
ccttgcaacctcaagtaatgtttcttgtattttggattatatcctgaagactctaatgttcgttcaaatatattgactcatcaatggattgctgaagggt |
312 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||| ||||||| | | | | ||||||| | |||||||| ||||||||| |||||||||| |
|
|
| T |
22442472 |
ccttgcaacctcaagtcatgtttcttgtattttggattatatcccgaagactatgaagcttgttcaaagacattgactcgtcaatggatagctgaagggt |
22442373 |
T |
 |
| Q |
313 |
ttgtgaaagaa |
323 |
Q |
| |
|
||||||||||| |
|
|
| T |
22442372 |
ttgtgaaagaa |
22442362 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 11 - 320
Target Start/End: Complemental strand, 22357931 - 22357625
Alignment:
| Q |
11 |
agaaaatcttatagatatatcttccaaaattgttgaaaaatgcaatggattaccactcgcaattgtagtcattggtggtattttagcttgcaaagatagg |
110 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
22357931 |
agaaaatcttattgatatatcttccaaaattgttaaaaaatgcaaaggattaccactagcaattgtagtcattggtggtattttagctcccaaagataaa |
22357832 |
T |
 |
| Q |
111 |
aatccaattgaatggtctaagtttagtgaaaatataaatgcagatctgtcaaaggaatattccatgatnnnnnnnnttctaggacttagttaccatgatt |
210 |
Q |
| |
|
| |||||| ||||||| ||||||||||||||||||||||||||| || | ||||||||||||| || || ||||| ||||||||||||||| |
|
|
| T |
22357831 |
attccaatggaatggtataagtttagtgaaaatataaatgcaga---gttagaggaatattccataataagaaaaattttaggatttagttaccatgatt |
22357735 |
T |
 |
| Q |
211 |
tgccttgcaacctcaagtaatgtttcttgtattttggattatatcctgaagactctaatgttcgttcaaatatattgactcatcaatggattgctgaagg |
310 |
Q |
| |
|
|||||| | ||||||||| ||||||||||||||||||||||||||||||||||| ||| |||| |||||| | |||||||| ||||||||||||||||| |
|
|
| T |
22357734 |
tgccttactacctcaagtcatgtttcttgtattttggattatatcctgaagactataaagttcattcaaagacattgactcgacaatggattgctgaagg |
22357635 |
T |
 |
| Q |
311 |
gtttgtgaaa |
320 |
Q |
| |
|
|||||||||| |
|
|
| T |
22357634 |
gtttgtgaaa |
22357625 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 16 - 340
Target Start/End: Complemental strand, 22635430 - 22635109
Alignment:
| Q |
16 |
atcttatagatatatcttccaaaattgttgaaaaatgcaatggattaccactcgcaattgtagtcattggtggtattttagcttgcaaagataggaatcc |
115 |
Q |
| |
|
||||||| |||||||||||||||||||| ||||||||||| |||||||| || ||||||||||||||||||| |||| || || ||| ||||| ||| | |
|
|
| T |
22635430 |
atcttattgatatatcttccaaaattgtcgaaaaatgcaaaggattacctctagcaattgtagtcattggtgatattctatctcgcacggatagaaattc |
22635331 |
T |
 |
| Q |
116 |
aattgaatggtctaagtttagtgaaaatataaatgcagatctgtcaaaggaatattccatgatnnnnnnnnttctaggacttagttaccatgatttgcct |
215 |
Q |
| |
|
||| |||||||| |||||||||||||||||||||||||| || | |||||||||||||||| || ||||||||||||||||||||||||| |
|
|
| T |
22635330 |
aatagaatggtcgaagtttagtgaaaatataaatgcaga---gttagaggaatattccatgataagaaaaattttaggacttagttaccatgatttgcca |
22635234 |
T |
 |
| Q |
216 |
tgcaacctcaagtaatgtttcttgtattttggattatatcctgaagactctaatgttcgttcaaatatattgactcatcaatggattgctgaagggtttg |
315 |
Q |
| |
|
||| ||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||||| | |||||||| |||||||||||||||||||| | |
|
|
| T |
22635233 |
tgctacctcaagtcatgtttcttgtattttggattatatcctgaagactatatagttcgttcaaaaacattgactcgccaatggattgctgaagggttcg |
22635134 |
T |
 |
| Q |
316 |
tgaaagaagaaaggggaatgacatt |
340 |
Q |
| |
|
|||||||||| ||||||| |||||| |
|
|
| T |
22635133 |
tgaaagaagacaggggaaggacatt |
22635109 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 11 - 324
Target Start/End: Complemental strand, 22630370 - 22630060
Alignment:
| Q |
11 |
agaaaatcttatagatatatcttccaaaattgttgaaaaatgcaatggattaccactcgcaattgtagtcattggtggtattttagcttgcaaagatagg |
110 |
Q |
| |
|
|||||||||| | || ||||||||||||||||||||||||||||| |||||||| || ||||||||||||| |||| ||||||| || |||||| ||| |
|
|
| T |
22630370 |
agaaaatctttttgacatatcttccaaaattgttgaaaaatgcaaaggattacctctagcaattgtagtcaccggtgatattttatctcgcaaagttaga |
22630271 |
T |
 |
| Q |
111 |
aatccaattgaatggtctaagtttagtgaaaatataaatgcagatctgtcaaaggaatattccatgatnnnnnnnnttctaggacttagttaccatgatt |
210 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||| || | |||||||||||| || | ||||| ||||||||||||||| |
|
|
| T |
22630270 |
aatccaattgaatggtctaagtttagtgaaaatataaatgtaga---gttagaggaatattccacaataagaaaaaatttaggatttagttaccatgatt |
22630174 |
T |
 |
| Q |
211 |
tgccttgcaacctcaagtaatgtttcttgtattttggattatatcctgaagactctaatgttcgttcaaatatattgactcatcaatggattgctgaagg |
310 |
Q |
| |
|
| |||| ||||||||||| ||||||||||||||||||||| ||||||||||||| || ||||||||||| | ||||||| |||||||| |||||||| |
|
|
| T |
22630173 |
taccttacaacctcaagtcatgtttcttgtattttggattctatcctgaagactatatagttcgttcaaaggtgttgactcgccaatggatcgctgaagg |
22630074 |
T |
 |
| Q |
311 |
gtttgtgaaagaag |
324 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
22630073 |
gtttgtgaaagaag |
22630060 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 25 - 323
Target Start/End: Complemental strand, 22353728 - 22353432
Alignment:
| Q |
25 |
atatatcttccaaaattgttgaaaaatgcaatggattaccactcgcaattgtagtcattggtggtattttagcttgcaaagataggaatccaattgaatg |
124 |
Q |
| |
|
||||||||||| ||||| ||||||||||||| |||||||| ||||||||||||||||| ||| ||||||| || |||||||||| |||||||||||||| |
|
|
| T |
22353728 |
atatatcttccgaaattattgaaaaatgcaaaggattacctctcgcaattgtagtcataggtaatattttatctcgcaaagatagaaatccaattgaatg |
22353629 |
T |
 |
| Q |
125 |
gtctaagtttagtgaaaatataaatgcagatctgtcaaaggaatattccatgatnnnnnnnnttctaggacttagttaccatgatttgcc-ttgcaacct |
223 |
Q |
| |
|
|||||||||||||||||||||||||||||| || | ||||||||||||| || || ||||| ||||||||||||||||||| || | |||| |
|
|
| T |
22353628 |
gtctaagtttagtgaaaatataaatgcaga---gttagaggaatattccataataagaaaaattttaggatttagttaccatgatttgcctttactacct |
22353532 |
T |
 |
| Q |
224 |
caagtaatgtttcttgtattttggattatatcctgaagactctaatgttcgttcaaatatattgactcatcaatggattgctgaagggtttgtgaaagaa |
323 |
Q |
| |
|
||||| |||||||||||||||||||||||||| ||||||| | ||| |||| ||| |||||||| ||||||||||||||| ||||||||||||||| |
|
|
| T |
22353531 |
caagtcatgtttcttgtattttggattatatctcgaagactacgaagtttattcagatacattgactcgtcaatggattgctgaggggtttgtgaaagaa |
22353432 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 11 - 343
Target Start/End: Complemental strand, 22467880 - 22467551
Alignment:
| Q |
11 |
agaaaatcttatagatatatcttccaaaattgttgaaaaatgcaatggattaccactcgcaattgtagtcattggtggtattttagcttgcaaagatagg |
110 |
Q |
| |
|
|||||||||| | || ||||||||||||||||||||||| ||||| |||||||| || |||||||| |||| |||| ||||||| || ||||| |||| |
|
|
| T |
22467880 |
agaaaatctttttgacatatcttccaaaattgttgaaaactgcaaaggattacctctagcaattgttgtcaccggtgatattttatctcgcaaaaataga |
22467781 |
T |
 |
| Q |
111 |
aatccaattgaatggtctaagtttagtgaaaatataaatgcagatctgtcaaaggaatattccatgatnnnnnnnnttctaggacttagttaccatgatt |
210 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||| ||| || | ||| |||||||| || || ||||| ||||||||||| ||| |
|
|
| T |
22467780 |
aatccaattgaatggtctaaatttagtgaaaatataaatgtaga---gttagagggatattccacaataagaaaaattttaggatttagttaccataatt |
22467684 |
T |
 |
| Q |
211 |
tgccttgcaacctcaagtaatgtttcttgtattttggattatatcctgaagactctaatgttcgttcaaatatattgactcatcaatggattgctgaagg |
310 |
Q |
| |
|
| |||| ||||||||||| ||||||||||||||||||||||||||||||||||| || |||| |||||| | ||||||| ||||||||||||||||| |
|
|
| T |
22467683 |
taccttacaacctcaagtcatgtttcttgtattttggattatatcctgaagactatatagttcattcaaagacgttgactcgccaatggattgctgaagg |
22467584 |
T |
 |
| Q |
311 |
gtttgtgaaagaagaaaggggaatgacattgga |
343 |
Q |
| |
|
||||||||| ||||| ||||| | ||||||||| |
|
|
| T |
22467583 |
gtttgtgaaggaagacagggggaggacattgga |
22467551 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 11 - 322
Target Start/End: Complemental strand, 22458418 - 22458110
Alignment:
| Q |
11 |
agaaaatcttatagatatatcttccaaaattgttgaaaaatgcaatggattaccactcgcaattgtagtcattggtggtattttagcttgcaaagatagg |
110 |
Q |
| |
|
|||||||||||| |||||||||| |||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
22458418 |
agaaaatcttattgatatatcttttaaaattgttgaaaaatgcaatggattgccactagcaattgtactcattggtggtattttatcttgcaaagataga |
22458319 |
T |
 |
| Q |
111 |
aatccaattgaatggtctaagtttagtgaaaatataaatgcagatctgtcaaaggaatattccatgatnnnnnnnnttctaggacttagttaccatgatt |
210 |
Q |
| |
|
||| || ||||||| |||||||||||||||| ||||| ||| || ||| ||| ||| | ||| || |||| || ||||||||||| |
|
|
| T |
22458318 |
aatacatcagaatggtataagtttagtgaaaatctaaatataga---gttaaaagaagatttgaagataaaaaaaattgtaggtctcggttaccatgatc |
22458222 |
T |
 |
| Q |
211 |
tgccttgcaacctcaagtaatgtttcttgtattttggattatatcctgaagactctaatgttcgttcaaatatattgactcatcaatggattgctgaagg |
310 |
Q |
| |
|
|| ||| ||| ||||||| |||||| ||||||||||||||||||||||||| | || |||| | |||||||| ||| || |||||||| |||||||| |
|
|
| T |
22458221 |
tgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaaggttgtatagttcctacaaatatactgattcggcaatggatggctgaagg |
22458122 |
T |
 |
| Q |
311 |
gtttgtgaaaga |
322 |
Q |
| |
|
||||||||||| |
|
|
| T |
22458121 |
atttgtgaaaga |
22458110 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 11 - 322
Target Start/End: Complemental strand, 22481399 - 22481091
Alignment:
| Q |
11 |
agaaaatcttatagatatatcttccaaaattgttgaaaaatgcaatggattaccactcgcaattgtagtcattggtggtattttagcttgcaaagatagg |
110 |
Q |
| |
|
|||||||||||| |||||||||| |||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
22481399 |
agaaaatcttattgatatatcttttaaaattgttgaaaaatgcaatggattgccactagcaattgtactcattggtggtattttatcttgcaaagataga |
22481300 |
T |
 |
| Q |
111 |
aatccaattgaatggtctaagtttagtgaaaatataaatgcagatctgtcaaaggaatattccatgatnnnnnnnnttctaggacttagttaccatgatt |
210 |
Q |
| |
|
||| || ||||||| |||||||||||||||| ||||| ||| || ||| ||| ||| | ||| || |||| || ||||||||||| |
|
|
| T |
22481299 |
aatacatcagaatggtataagtttagtgaaaatctaaatataga---gttaaaagaagatttgaagataaaaaaaattgtaggtctcggttaccatgatc |
22481203 |
T |
 |
| Q |
211 |
tgccttgcaacctcaagtaatgtttcttgtattttggattatatcctgaagactctaatgttcgttcaaatatattgactcatcaatggattgctgaagg |
310 |
Q |
| |
|
|| ||| ||| ||||||| |||||| ||||||||||||||||||||||||| | || |||| | |||||||| ||| || |||||||| |||||||| |
|
|
| T |
22481202 |
tgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaaggttgtatagttcctacaaatatactgattcggcaatggatggctgaagg |
22481103 |
T |
 |
| Q |
311 |
gtttgtgaaaga |
322 |
Q |
| |
|
||||||||||| |
|
|
| T |
22481102 |
atttgtgaaaga |
22481091 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 230 - 331
Target Start/End: Complemental strand, 22620597 - 22620496
Alignment:
| Q |
230 |
atgtttcttgtattttggattatatcctgaagactctaatgttcgttcaaatatattgactcatcaatggattgctgaagggtttgtgaaagaagaaagg |
329 |
Q |
| |
|
|||||| |||||||||||||||||||| ||||| | ||| ||| |||||| | ||||| || |||||||| |||||||||||||| |||||||||||| |
|
|
| T |
22620597 |
atgtttattgtattttggattatatccagaagattataaagttgattcaaagagattgattcggcaatggatagctgaagggtttgtaaaagaagaaagg |
22620498 |
T |
 |
| Q |
330 |
gg |
331 |
Q |
| |
|
|| |
|
|
| T |
22620497 |
gg |
22620496 |
T |
 |
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Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 24 - 95
Target Start/End: Complemental strand, 22620827 - 22620756
Alignment:
| Q |
24 |
gatatatcttccaaaattgttgaaaaatgcaatggattaccactcgcaattgtagtcattggtggtatttta |
95 |
Q |
| |
|
|||||||||||| |||||| | ||||||||| || |||||||| |||||||||| | |||||||| ||||| |
|
|
| T |
22620827 |
gatatatcttccgaaattgctagaaaatgcaagggtttaccactagcaattgtagccgttggtggtctttta |
22620756 |
T |
 |
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Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 331
Target Start/End: Complemental strand, 22656703 - 22656666
Alignment:
| Q |
294 |
caatggattgctgaagggtttgtgaaagaagaaagggg |
331 |
Q |
| |
|
|||||||| |||||||| |||||||||||||||||||| |
|
|
| T |
22656703 |
caatggatagctgaaggttttgtgaaagaagaaagggg |
22656666 |
T |
 |
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