View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF17706_low_4 (Length: 378)
Name: NF17706_low_4
Description: NF17706
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17706_low_4 |
 | |
|
| [»] scaffold0028 (2 HSPs) |
| | |
|
| [»] scaffold0482 (1 HSPs) |
| | |
|
| [»] scaffold0040 (2 HSPs) |
| | |
|
| [»] scaffold0233 (1 HSPs) |
| | |
|
| [»] scaffold0001 (1 HSPs) |
| | |
|
Alignment Details
Target: chr5 (Bit Score: 290; Significance: 1e-163; HSPs: 11)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 290; E-Value: 1e-163
Query Start/End: Original strand, 20 - 372
Target Start/End: Complemental strand, 22489019 - 22488666
Alignment:
| Q |
20 |
gatatagtgcgagagcttggaatttgctttgtttgcgaagagttttgtttgtagtgatgattttcacttagagagatattagcttgcaaaactcttgctt |
119 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22489019 |
gatatagtgagagagcttggaatttgctttgtttgcgaagagctttgtttgtagtgatgattttcacttagagagatattagcttgcaaaactcttgctt |
22488920 |
T |
|
| Q |
120 |
ttgaccttcaaaggcccttgtatttataggtgaggagtgtcttggtgatcaagggagaaaatagagctgttggacacgttttagatagctgtccaaagtc |
219 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
22488919 |
atgaccttcaaagacccttgtatttataggtgaggagtgtcttggtgatcaagggagaaaatagagctgttggacacgtttttgatagctgtccaaagtc |
22488820 |
T |
|
| Q |
220 |
tcagttgatttctcttttcttcttt-aaatagccagaacgttctcataatgttctttctgatttgcatgactttgaaagcactgttgcttgcttgcgcat |
318 |
Q |
| |
|
||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| || |||||||||||||||||||||||||| ||| |
|
|
| T |
22488819 |
tcaattgatttctcttttcttctttaaaatagccagaacgttctcagaatgttctttctgatttgcctggctttgaaagcactgttgcttgcttgcacat |
22488720 |
T |
|
| Q |
319 |
gagatcaccaactgtaatgagctgtataacttgctgcccaatgttgatgatgtc |
372 |
Q |
| |
|
||||| |||| ||||||||||||||||||||||||||| |||| |||||||||| |
|
|
| T |
22488719 |
gagataaccagctgtaatgagctgtataacttgctgcctaatgctgatgatgtc |
22488666 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 20 - 372
Target Start/End: Original strand, 30445184 - 30445538
Alignment:
| Q |
20 |
gatatagtgcgagagcttggaatttgctttgtttgcgaagagttttgtttgtagtgatgattttcacttagagagatattagcttgcaaaactcttgctt |
119 |
Q |
| |
|
||||||||| |||||||||||||||||||||| || |||||| |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |
|
|
| T |
30445184 |
gatatagtgagagagcttggaatttgctttgtatgtgaagagctttgtttgtagtgatgattttcactttgagagatattagctttcaaaactcttgctt |
30445283 |
T |
|
| Q |
120 |
ttgaccttcaaaggcccttgtatttataggtgaggagtgtcttggtgatcaagggagaaaatagagctgttggacacgttttagatagctgtccaaagtc |
219 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
30445284 |
atgaccttcaaaggcccttgtatttataggtgaggagtgtcttggtgaccaagggagaaaatagagctgttggacacgtttttgatagctgtccaaagtc |
30445383 |
T |
|
| Q |
220 |
tcagttgatttctcttttcttctt-taaatagccagaacgttctcataatgttctttctgatttgcatgactttgaaagcactgttgc-ttgcttgcgca |
317 |
Q |
| |
|
||| |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |
|
|
| T |
30445384 |
tcatttgatttctcttttcttcttaaaaatagccagaacgttctcagaatgttctttctgatttgcctgactttgaaagcactgttgctttgcttgcgca |
30445483 |
T |
|
| Q |
318 |
tgagatcaccaactgtaatgagctgtataacttgctgcccaatgttgatgatgtc |
372 |
Q |
| |
|
|||||| |||| ||||||||||||||||||||||| ||||| | |||||||||| |
|
|
| T |
30445484 |
tgagataaccagctgtaatgagctgtataacttgcagcccacttctgatgatgtc |
30445538 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 20 - 372
Target Start/End: Original strand, 30454556 - 30454910
Alignment:
| Q |
20 |
gatatagtgcgagagcttggaatttgctttgtttgcgaagagttttgtttgtagtgatgattttcacttagagagatattagcttgcaaaactcttgctt |
119 |
Q |
| |
|
||||||||| |||||||||||||||||||||| || |||||| |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |
|
|
| T |
30454556 |
gatatagtgagagagcttggaatttgctttgtatgtgaagagctttgtttgtagtgatgattttcactttgagagatattagctttcaaaactcttgctt |
30454655 |
T |
|
| Q |
120 |
ttgaccttcaaaggcccttgtatttataggtgaggagtgtcttggtgatcaagggagaaaatagagctgttggacacgttttagatagctgtccaaagtc |
219 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
30454656 |
atgaccttcaaaggcccttgtatttataggtgaggagtgtcttggtgaccaagggagaaaatagagctgttggacacgtttttgatagctgtccaaagtc |
30454755 |
T |
|
| Q |
220 |
tcagttgatttctcttttcttctt-taaatagccagaacgttctcataatgttctttctgatttgcatgactttgaaagcactgttgc-ttgcttgcgca |
317 |
Q |
| |
|
||| |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |
|
|
| T |
30454756 |
tcatttgatttctcttttcttcttaaaaatagccagaacgttctcagaatgttctttctgatttgcctgactttgaaagcactgttgctttgcttgcgca |
30454855 |
T |
|
| Q |
318 |
tgagatcaccaactgtaatgagctgtataacttgctgcccaatgttgatgatgtc |
372 |
Q |
| |
|
|||||| |||| ||||||||||||||||||||||| ||||| | |||||||||| |
|
|
| T |
30454856 |
tgagataaccagctgtaatgagctgtataacttgcagcccacttctgatgatgtc |
30454910 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 20 - 372
Target Start/End: Original strand, 30459614 - 30459968
Alignment:
| Q |
20 |
gatatagtgcgagagcttggaatttgctttgtttgcgaagagttttgtttgtagtgatgattttcacttagagagatattagcttgcaaaactcttgctt |
119 |
Q |
| |
|
||||||||| |||||||||||||||||||||| || |||||| |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |
|
|
| T |
30459614 |
gatatagtgagagagcttggaatttgctttgtatgtgaagagctttgtttgtagtgatgattttcactttgagagatattagctttcaaaactcttgctt |
30459713 |
T |
|
| Q |
120 |
ttgaccttcaaaggcccttgtatttataggtgaggagtgtcttggtgatcaagggagaaaatagagctgttggacacgttttagatagctgtccaaagtc |
219 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
30459714 |
atgaccttcaaaggcccttgtatttataggtgaggagtgtcttggtgaccaagggagaaaatagagctgttggacacgtttttgatagctgtccaaagtc |
30459813 |
T |
|
| Q |
220 |
tcagttgatttctcttttcttctt-taaatagccagaacgttctcataatgttctttctgatttgcatgactttgaaagcactgttgc-ttgcttgcgca |
317 |
Q |
| |
|
||| |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |
|
|
| T |
30459814 |
tcatttgatttctcttttcttcttaaaaatagccagaacgttctcagaatgttctttctgatttgcctgactttgaaagcactgttgctttgcttgcgca |
30459913 |
T |
|
| Q |
318 |
tgagatcaccaactgtaatgagctgtataacttgctgcccaatgttgatgatgtc |
372 |
Q |
| |
|
|||||| |||| ||||||||||||||||||||||| ||||| | |||||||||| |
|
|
| T |
30459914 |
tgagataaccagctgtaatgagctgtataacttgcagcccacttctgatgatgtc |
30459968 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 20 - 352
Target Start/End: Complemental strand, 18568871 - 18568537
Alignment:
| Q |
20 |
gatatagtgcgagagcttggaatttgctttgtttgcgaagagttttgtttgtagtgatgattttcacttagagagatattagcttgcaaaactcttgctt |
119 |
Q |
| |
|
||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |
|
|
| T |
18568871 |
gatatagtgagagagcttggaatttgctttgtatgcgaagagctttgtttgtagtgatgattttcactttgagagatattagctttcaaaactcttgctt |
18568772 |
T |
|
| Q |
120 |
ttgaccttcaaaggcccttgtatttataggtgaggagtgtcttggtgatcaagggagaaaatagagctgttggacacgttttagatagctgtccaaagtc |
219 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
18568771 |
atgaccttcaaaggcccttgtatttataggtgaggagtgtcttggtgaccaagggagaaaatagagctgttggacacgtttttgatagctgtccaaagtc |
18568672 |
T |
|
| Q |
220 |
tcagttgatttctcttttcttctt-taaatagccagaacgttctcataatgttctttctgatttgcatgactttgaaagcactgttgc-ttgcttgcgca |
317 |
Q |
| |
|
||| |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |
|
|
| T |
18568671 |
tcatttgatttctcttttcttcttaaaaatagccagaacgttctcagaatgttctttctgatttgcctgactttgaaagcactgttgctttgcttgcgca |
18568572 |
T |
|
| Q |
318 |
tgagatcaccaactgtaatgagctgtataacttgc |
352 |
Q |
| |
|
|||||| |||| |||||||||||||| |||||||| |
|
|
| T |
18568571 |
tgagataaccagctgtaatgagctgtgtaacttgc |
18568537 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 20 - 372
Target Start/End: Complemental strand, 24412661 - 24412307
Alignment:
| Q |
20 |
gatatagtgcgagagcttggaatttgctttgtttgcgaagagttttgtttgtagtgatgattttcacttagagagatattagcttgcaaaactcttgctt |
119 |
Q |
| |
|
|||| |||| |||||||||||||||||||||| || |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
24412661 |
gatacagtgagagagcttggaatttgctttgtatgtgaagagctttgtttgtagtgatgattttcactttgagagatattagcttgcaaaactcttgctt |
24412562 |
T |
|
| Q |
120 |
ttgaccttcaaaggcccttgtatttataggtgaggagtgtcttggtgatcaagggagaaaatagagctgttggacacgttttagatagctgtccaaagtc |
219 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
24412561 |
atgaccttcaaaggcccttgtatttataggtgaggagtgtcttggtgaccaagggagaaaatagagctgttggacacgtttttgatagctgtccaaagtc |
24412462 |
T |
|
| Q |
220 |
tcagttgatttctcttttcttcttt-aaatagccagaacgttctcataatgttctttctgatttgcatgactttgaaagcactgttgc-ttgcttgcgca |
317 |
Q |
| |
|
||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||||| ||||||||||| |
|
|
| T |
24412461 |
tcaattgatttctcttttcttctttaaaatagccagaacgttctcagaatgttctttctgatttgcctgacttagaaagcactgttgctttgcttgcgca |
24412362 |
T |
|
| Q |
318 |
tgagatcaccaactgtaatgagctgtataacttgctgcccaatgttgatgatgtc |
372 |
Q |
| |
|
|||||| |||| |||| |||||||||||||||||| ||||| | |||||||||| |
|
|
| T |
24412361 |
tgagataaccagctgtgatgagctgtataacttgcagcccacttctgatgatgtc |
24412307 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 20 - 372
Target Start/End: Complemental strand, 24422110 - 24421767
Alignment:
| Q |
20 |
gatatagtgcgagagcttggaatttgctttgtttgcgaagagttttgtttgtagtgatgattttcacttagagagatattagcttgcaaaactcttgctt |
119 |
Q |
| |
|
|||| |||| |||||||||||||||||||||| || |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
24422110 |
gatacagtgagagagcttggaatttgctttgtatgtgaagagctttgtttgtagtgatgattttcactttgagagatattagcttgcaaaactcttgctt |
24422011 |
T |
|
| Q |
120 |
ttgaccttcaaaggcccttgtatttataggtgaggagtgtcttggtgatcaagggagaaaatagagctgttggacacgttttagatagctgtccaaagtc |
219 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| ||||||||||||||||| |
|
|
| T |
24422010 |
atgaccttcaaaggcccttgtatttataggtgaggagtgtcttggtgaccaagggagaaaatagagctgctggacacgtttttgatagctgtccaaagtc |
24421911 |
T |
|
| Q |
220 |
tcagttgatttctcttttcttcttt-aaatagccagaacgttctcataatgttctttctgatttgcatgactttgaaagcactgttgc-ttgcttgcgca |
317 |
Q |
| |
|
||| ||||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||| |||||||||||||| ||||||||||| |
|
|
| T |
24421910 |
tcaattgatttctcttttcttctttaaaatagccag-----------aatgttctttctgatttgcctgacttagaaagcactgttgctttgcttgcgca |
24421822 |
T |
|
| Q |
318 |
tgagatcaccaactgtaatgagctgtataacttgctgcccaatgttgatgatgtc |
372 |
Q |
| |
|
|||||| |||| |||| |||||||||||||||||| ||||| | |||||||||| |
|
|
| T |
24421821 |
tgagataaccagctgtgatgagctgtataacttgcagcccacttctgatgatgtc |
24421767 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 63 - 372
Target Start/End: Complemental strand, 4635752 - 4635442
Alignment:
| Q |
63 |
tttgtttgtagtgatgattttcacttagagagatattagcttgcaaaactcttgcttttgaccttcaaaggcccttgtatttataggtgaggagtgtctt |
162 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
4635752 |
tttgtttgcagtgatgattttcacttagagagatattagcttgcaaaactctagcttatgaccttcaaagacccttgtatttataggtgaggagtgtctt |
4635653 |
T |
|
| Q |
163 |
ggtgatcaagggagaaaatagagctgttggacacgttttagatagctgtccaaagtctcagttgatttctcttttcttcttt-aaatagccagaacgttc |
261 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||| ||||| |||||||||||||| ||||||| ||||||||||||| ||||||| |||| |||| |
|
|
| T |
4635652 |
ggtgatcaagggagaaaatagagctgttggatgcgtttttgatagttgtccaaagtctcaattgatttttcttttcttctttaaaatagctagaatgttc |
4635553 |
T |
|
| Q |
262 |
tcataatgttctttctgatttgcatgactttgaaagcactgttgcttgcttgcgcatgagatcaccaactgtaatgagctgtataacttgctgcccaatg |
361 |
Q |
| |
|
||| ||||||||||||||||||| || ||||||||||||| |||||||||||||| ||||| |||| ||||||||| ||||||||||| ||| || || |
|
|
| T |
4635552 |
tcaaaatgttctttctgatttgcctggctttgaaagcactattgcttgcttgcgcgtgagagaaccagttgtaatgagttgtataacttgttgcgcactg |
4635453 |
T |
|
| Q |
362 |
ttgatgatgtc |
372 |
Q |
| |
|
|||||||||| |
|
|
| T |
4635452 |
ctgatgatgtc |
4635442 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 171 - 361
Target Start/End: Original strand, 24278813 - 24279004
Alignment:
| Q |
171 |
agggagaaaatagagctgttggacacgtttta-gatagctgtccaaagtctcagttgatttctcttttcttcttt--aaatagccagaacgttctcataa |
267 |
Q |
| |
|
||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||||||||| ||||||||| |||||||||||||||||||| || |
|
|
| T |
24278813 |
agggagaaaatagagttgttggacacgttttttgatagctgtccaaaatctcagttgatttctctcttcttctttaaaaatagccagaacgttctca-aa |
24278911 |
T |
|
| Q |
268 |
tgttctttctgatttgcatgactttgaaagcactgttgcttgcttgcgcatgagatcaccaactgtaatgagctgtataacttgctgcccaatg |
361 |
Q |
| |
|
|||| | |||||||||| | |||||| ||| ||||||||||||| |||||||| |||| |||||||| |||| | ||||| ||||||||| |
|
|
| T |
24278912 |
tgttgtgtctgatttgcctaactttgcttgcattgttgcttgcttgtgcatgagagtaccagttgtaatgaactgt-ttacttgttgcccaatg |
24279004 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 171 - 361
Target Start/End: Complemental strand, 24383401 - 24383210
Alignment:
| Q |
171 |
agggagaaaatagagctgttggacacgtttta-gatagctgtccaaagtctcagttgatttctcttttcttcttt--aaatagccagaacgttctcataa |
267 |
Q |
| |
|
||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||||||||| ||||||||| |||||||||||||||||||| || |
|
|
| T |
24383401 |
agggagaaaatagagttgttggacacgttttttgatagctgtccaaaatctcagttgatttctctcttcttctttaaaaatagccagaacgttctca-aa |
24383303 |
T |
|
| Q |
268 |
tgttctttctgatttgcatgactttgaaagcactgttgcttgcttgcgcatgagatcaccaactgtaatgagctgtataacttgctgcccaatg |
361 |
Q |
| |
|
|||| | |||||||||| | |||||| ||| ||||||||||||| |||||||| |||| |||||||| |||| | ||||| ||||||||| |
|
|
| T |
24383302 |
tgttgtgtctgatttgcctaactttgcttgcattgttgcttgcttgtgcatgagagtaccagttgtaatgaactgt-ttacttgttgcccaatg |
24383210 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 30 - 120
Target Start/End: Original strand, 22118460 - 22118550
Alignment:
| Q |
30 |
gagagcttggaatttgctttgtttgcgaagagttttgtttgtagtgatgattttcactt-agagagatattagcttgcaaaactcttgcttt |
120 |
Q |
| |
|
|||||||||||||||| |||||||| |||||| ||||| |||||||||||||||||||| ||||| ||||| |||| |||||||||| |||| |
|
|
| T |
22118460 |
gagagcttggaatttgatttgtttgtgaagagctttgtatgtagtgatgattttcacttgagaga-atatttgctttcaaaactcttacttt |
22118550 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 290; Significance: 1e-163; HSPs: 9)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 290; E-Value: 1e-163
Query Start/End: Original strand, 20 - 372
Target Start/End: Original strand, 15843252 - 15843605
Alignment:
| Q |
20 |
gatatagtgcgagagcttggaatttgctttgtttgcgaagagttttgtttgtagtgatgattttcacttagagagatattagcttgcaaaactcttgctt |
119 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15843252 |
gatatagtgagagagcttggaatttgctttgtttgcgaagagctttgtttgtagtgatgattttcacttagagagatattagcttgcaaaactcttgctt |
15843351 |
T |
|
| Q |
120 |
ttgaccttcaaaggcccttgtatttataggtgaggagtgtcttggtgatcaagggagaaaatagagctgttggacacgttttagatagctgtccaaagtc |
219 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| |
|
|
| T |
15843352 |
atgaccttcaaaggcccttgtatttataggtgaggagtgtcttggtgatcaagggagaaaatagagctgttggacacgttttttatagctgttcaaagtc |
15843451 |
T |
|
| Q |
220 |
tcagttgatttctcttttcttcttt-aaatagccagaacgttctcataatgttctttctgatttgcatgactttgaaagcactgttgcttgcttgcgcat |
318 |
Q |
| |
|
||| ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||| |
|
|
| T |
15843452 |
tcaattgatttctcttttcttctttaaaatagccataacgttctcataatgttctttctgatttgcctggctttgaaagcactgttgcttgcttgcgcat |
15843551 |
T |
|
| Q |
319 |
gagatcaccaactgtaatgagctgtataacttgctgcccaatgttgatgatgtc |
372 |
Q |
| |
|
||||| |||| |||||||||||||||||| ||||||||||||| |||||||||| |
|
|
| T |
15843552 |
gagataaccagctgtaatgagctgtataatttgctgcccaatgctgatgatgtc |
15843605 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 20 - 372
Target Start/End: Original strand, 3242642 - 3242996
Alignment:
| Q |
20 |
gatatagtgcgagagcttggaatttgctttgtttgcgaagagttttgtttgtagtgatgattttcacttagagagatattagcttgcaaaactcttgctt |
119 |
Q |
| |
|
||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
3242642 |
gatatagtgagagagcttggaatttgctttgtatgcgaagagctttgtttgtagtgatgattttcactttgagagatattagcttgcaaaactcttgctt |
3242741 |
T |
|
| Q |
120 |
ttgaccttcaaaggcccttgtatttataggtgaggagtgtcttggtgatcaagggagaaaatagagctgttggacacgttttagatagctgtccaaagtc |
219 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
3242742 |
atgaccttcaaaggcccttgtatttataggtgaggagtgtcttggtgaccaagggagaaaatagagctgttggacacgtttttgatagctgtccaaagtc |
3242841 |
T |
|
| Q |
220 |
tcagttgatttctcttttcttcttt-aaatagccagaacgttctcataatgttctttctgatttgcatgactttgaaagcactgttgc-ttgcttgcgca |
317 |
Q |
| |
|
||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||||| ||||||||||| |
|
|
| T |
3242842 |
tcaattgatttctcttttcttctttaaaatagccagaacgttctcagaatgttctttctgatttgcctgacttagaaagcactgttgctttgcttgcgca |
3242941 |
T |
|
| Q |
318 |
tgagatcaccaactgtaatgagctgtataacttgctgcccaatgttgatgatgtc |
372 |
Q |
| |
|
|||||| |||| |||| |||||||||||||||||| ||||| | |||||||||| |
|
|
| T |
3242942 |
tgagataaccagctgtgatgagctgtataacttgcagcccacttctgatgatgtc |
3242996 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 20 - 372
Target Start/End: Complemental strand, 3917899 - 3917545
Alignment:
| Q |
20 |
gatatagtgcgagagcttggaatttgctttgtttgcgaagagttttgtttgtagtgatgattttcacttagagagatattagcttgcaaaactcttgctt |
119 |
Q |
| |
|
||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
3917899 |
gatatagtgagagagcttggaatttgctttgtatgcgaagagctttgtttgtagtgatgattttcactttgagagatattagcttgcaaaactcttgctt |
3917800 |
T |
|
| Q |
120 |
ttgaccttcaaaggcccttgtatttataggtgaggagtgtcttggtgatcaagggagaaaatagagctgttggacacgttttagatagctgtccaaagtc |
219 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
3917799 |
atgaccttcaaaggcccttgtatttataggtgaggagtgtcttggtgaccaagggagaaaatagagctgttggacacgtttttgatagctgtccaaagtc |
3917700 |
T |
|
| Q |
220 |
tcagttgatttctcttttcttcttt-aaatagccagaacgttctcataatgttctttctgatttgcatgactttgaaagcactgttgc-ttgcttgcgca |
317 |
Q |
| |
|
||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||||| ||||||||||| |
|
|
| T |
3917699 |
tcaattgatttctcttttcttctttaaaatagccagaacgttctcagaatgttctttctgatttgcctgacttagaaagcactgttgctttgcttgcgca |
3917600 |
T |
|
| Q |
318 |
tgagatcaccaactgtaatgagctgtataacttgctgcccaatgttgatgatgtc |
372 |
Q |
| |
|
|||||| |||| |||| |||||||||||||||||| ||||| | |||||||||| |
|
|
| T |
3917599 |
tgagataaccagctgtgatgagctgtataacttgcagcccacttctgatgatgtc |
3917545 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 20 - 372
Target Start/End: Complemental strand, 26812341 - 26811987
Alignment:
| Q |
20 |
gatatagtgcgagagcttggaatttgctttgtttgcgaagagttttgtttgtagtgatgattttcacttagagagatattagcttgcaaaactcttgctt |
119 |
Q |
| |
|
||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
26812341 |
gatatagtgagagagcttggaatttgctttgtatgcgaagagctttgtttgtagtgatgattttcactttgagagatattagcttgcaaaactcttgctt |
26812242 |
T |
|
| Q |
120 |
ttgaccttcaaaggcccttgtatttataggtgaggagtgtcttggtgatcaagggagaaaatagagctgttggacacgttttagatagctgtccaaagtc |
219 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
26812241 |
atgaccttcaaaggcccttgtatttataggtgaggagtgtcttggtgaccaagggagaaaatagagctgttggacacgtttttgatagctgtccaaagtc |
26812142 |
T |
|
| Q |
220 |
tcagttgatttctcttttcttcttt-aaatagccagaacgttctcataatgttctttctgatttgcatgactttgaaagcactgttgc-ttgcttgcgca |
317 |
Q |
| |
|
||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||||| ||||||||||| |
|
|
| T |
26812141 |
tcaattgatttctcttttcttctttaaaatagccagaacgttctcagaatgttctttctgatttgcctgacttagaaagcactgttgctttgcttgcgca |
26812042 |
T |
|
| Q |
318 |
tgagatcaccaactgtaatgagctgtataacttgctgcccaatgttgatgatgtc |
372 |
Q |
| |
|
|||||| |||| |||| |||||||||||||||||| ||||| | |||||||||| |
|
|
| T |
26812041 |
tgagataaccagctgtgatgagctgtataacttgcagcccacttctgatgatgtc |
26811987 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 20 - 372
Target Start/End: Complemental strand, 26821808 - 26821454
Alignment:
| Q |
20 |
gatatagtgcgagagcttggaatttgctttgtttgcgaagagttttgtttgtagtgatgattttcacttagagagatattagcttgcaaaactcttgctt |
119 |
Q |
| |
|
||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
26821808 |
gatatagtgagagagcttggaatttgctttgtatgcgaagagctttgtttgtagtgatgattttcactttgagagatattagcttgcaaaactcttgctt |
26821709 |
T |
|
| Q |
120 |
ttgaccttcaaaggcccttgtatttataggtgaggagtgtcttggtgatcaagggagaaaatagagctgttggacacgttttagatagctgtccaaagtc |
219 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
26821708 |
atgaccttcaaaggcccttgtatttataggtgaggagtgtcttggtgaccaagggagaaaatagagctgttggacacgtttttgatagctgtccaaagtc |
26821609 |
T |
|
| Q |
220 |
tcagttgatttctcttttcttcttt-aaatagccagaacgttctcataatgttctttctgatttgcatgactttgaaagcactgttgc-ttgcttgcgca |
317 |
Q |
| |
|
||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||||| ||||||||||| |
|
|
| T |
26821608 |
tcaattgatttctcttttcttctttaaaatagccagaacgttctcagaatgttctttctgatttgcctgacttagaaagcactgttgctttgcttgcgca |
26821509 |
T |
|
| Q |
318 |
tgagatcaccaactgtaatgagctgtataacttgctgcccaatgttgatgatgtc |
372 |
Q |
| |
|
|||||| |||| |||| |||||||||||||||||| ||||| | |||||||||| |
|
|
| T |
26821508 |
tgagataaccagctgtgatgagctgtataacttgcagcccacttctgatgatgtc |
26821454 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 20 - 372
Target Start/End: Complemental strand, 37058920 - 37058566
Alignment:
| Q |
20 |
gatatagtgcgagagcttggaatttgctttgtttgcgaagagttttgtttgtagtgatgattttcacttagagagatattagcttgcaaaactcttgctt |
119 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37058920 |
gatatagtgagagagcttggaatttgctttgtttgcgaagagctctgtttgtagtgatgattttcacttagagagatattagcttgcaaaactcttgctt |
37058821 |
T |
|
| Q |
120 |
ttgaccttcaaaggcccttgtatttataggtgaggagtgtcttggtgatcaagggagaaaatagagctgttggacacgttttagatagctgtccaaagtc |
219 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| |
|
|
| T |
37058820 |
atgaccttcaaaggcccttgtatttataggtgaggagtgtcttggtgatcaagggagaaaatagagttgttggacacgtttttgatagctgtccaaagtc |
37058721 |
T |
|
| Q |
220 |
tcagttgatttctcttttcttcttt-aaatagccagaacgttctcataatgttctttctgatttgcatgactttgaaagcactgttg-cttgcttgcgca |
317 |
Q |
| |
|
||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| || ||||||||||||||||| ||||||||||| |
|
|
| T |
37058720 |
tcaattgatttctcttttcttctttaaaatagccagaacgttctcaaaatgttctttctgatttgcctggctttgaaagcactgttgttttgcttgcgca |
37058621 |
T |
|
| Q |
318 |
tgagatcaccaactgtaatgagctgtataacttgctgcccaatgttgatgatgtc |
372 |
Q |
| |
|
|||||| |||| ||||||||||||||||||||| |||||| | |||||||||| |
|
|
| T |
37058620 |
tgagataaccagctgtaatgagctgtataactttgtgcccacttctgatgatgtc |
37058566 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 20 - 372
Target Start/End: Original strand, 54690268 - 54690622
Alignment:
| Q |
20 |
gatatagtgcgagagcttggaatttgctttgtttgcgaagagttttgtttgtagtgatgattttcacttagagagatattagcttgcaaaactcttgctt |
119 |
Q |
| |
|
||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |
|
|
| T |
54690268 |
gatatagtgagagagcttggaatttgctttgtatgcgaagagctttgtttgtagtgatgattttcactttgagagatattagctttcaaaactcttgctt |
54690367 |
T |
|
| Q |
120 |
ttgaccttcaaaggcccttgtatttataggtgaggagtgtcttggtgatcaagggagaaaatagagctgttggacacgttttagatagctgtccaaagtc |
219 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
54690368 |
atgaccttcaaaggcccttgtatttataggtgaggagtgtcttggtgaccaagggagaaaatagagctgttggacacgtttttgatagctgtccaaagtc |
54690467 |
T |
|
| Q |
220 |
tcagttgatttctcttttcttcttt-aaatagccagaacgttctcataatgttctttctgatttgcatgactttgaaagcactgttgc-ttgcttgcgca |
317 |
Q |
| |
|
||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||||| ||||||||||| |
|
|
| T |
54690468 |
tcaattgatttctcttttcttctttaaaatagccagaacgttctcagaatgttctttctgatttgcctgacttagaaagcactgttgctttgcttgcgca |
54690567 |
T |
|
| Q |
318 |
tgagatcaccaactgtaatgagctgtataacttgctgcccaatgttgatgatgtc |
372 |
Q |
| |
|
|||||| |||| |||| |||||||||||||||||| ||||| | |||||||||| |
|
|
| T |
54690568 |
tgagataaccagctgtgatgagctgtataacttgcagcccacttctgatgatgtc |
54690622 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 20 - 372
Target Start/End: Original strand, 54699699 - 54700053
Alignment:
| Q |
20 |
gatatagtgcgagagcttggaatttgctttgtttgcgaagagttttgtttgtagtgatgattttcacttagagagatattagcttgcaaaactcttgctt |
119 |
Q |
| |
|
||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |
|
|
| T |
54699699 |
gatatagtgagagagcttggaatttgctttgtatgcgaagagctttgtttgtagtgatgattttcactttgagagatattagctttcaaaactcttgctt |
54699798 |
T |
|
| Q |
120 |
ttgaccttcaaaggcccttgtatttataggtgaggagtgtcttggtgatcaagggagaaaatagagctgttggacacgttttagatagctgtccaaagtc |
219 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
54699799 |
atgaccttcaaaggcccttgtatttataggtgaggagtgtcttggtgaccaagggagaaaatagagctgttggacacgtttttgatagctgtccaaagtc |
54699898 |
T |
|
| Q |
220 |
tcagttgatttctcttttcttcttt-aaatagccagaacgttctcataatgttctttctgatttgcatgactttgaaagcactgttgc-ttgcttgcgca |
317 |
Q |
| |
|
||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||||| ||||||||||| |
|
|
| T |
54699899 |
tcaattgatttctcttttcttctttaaaatagccagaacgttctcagaatgttctttctgatttgcctgacttagaaagcactgttgctttgcttgcgca |
54699998 |
T |
|
| Q |
318 |
tgagatcaccaactgtaatgagctgtataacttgctgcccaatgttgatgatgtc |
372 |
Q |
| |
|
|||||| |||| |||| |||||||||||||||||| ||||| | |||||||||| |
|
|
| T |
54699999 |
tgagataaccagctgtgatgagctgtataacttgcagcccacttctgatgatgtc |
54700053 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 243
Target Start/End: Original strand, 18125771 - 18125981
Alignment:
| Q |
30 |
gagagcttggaatttgctttgtttgcgaagagttttgtttgtagtgatgattttcacttagagaga-tattagcttgcaaaactcttgcttttgaccttc |
128 |
Q |
| |
|
|||||||||| ||||| |||||||| |||||| || || ||||||||||||||| ||| ||||||| | || |||| ||||| |||| ||| | ||| |
|
|
| T |
18125771 |
gagagcttggtatttg-tttgtttgtgaagagctt-gtatgtagtgatgatttttact-agagagaatgtttgctttcaaaattctttatttgaagcttt |
18125867 |
T |
|
| Q |
129 |
aaaggcccttgtatttataggtgaggagtgtcttggtgatcaagggagaaaatagagctgttggacacgttttagatagctgtccaaagtctcagttgat |
228 |
Q |
| |
|
||| | |||||||||||| || |||||| ||| ||||||||| | ||||| |||| |||||||||| |||| | |||||||||||| ||| ||| | |
|
|
| T |
18125868 |
aaaaccacttgtatttatatatgtggagtgacttagtgatcaagtgtgaaaaaagagttgttggacacatttttg-cagctgtccaaagcttcaattggt |
18125966 |
T |
|
| Q |
229 |
ttctcttttcttctt |
243 |
Q |
| |
|
||| ||||||||||| |
|
|
| T |
18125967 |
ttcacttttcttctt |
18125981 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 275; Significance: 1e-154; HSPs: 4)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 20 - 372
Target Start/End: Original strand, 23895971 - 23896325
Alignment:
| Q |
20 |
gatatagtgcgagagcttggaatttgctttgtttgcgaagagttttgtttgtagtgatgattttcacttagagagatattagcttgcaaaactcttgctt |
119 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |
|
|
| T |
23895971 |
gatatagtgagagagcttggaatttgctttgtttgcgaagagctttgtttgtagtgatgattttcactttgagagatattagcttacaaaactcttgctt |
23896070 |
T |
|
| Q |
120 |
ttgaccttcaaaggcccttgtatttataggtgaggagtgtcttggtgatcaagggagaaaatagagctgttggacacgttttagatagctgtccaaagtc |
219 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |
|
|
| T |
23896071 |
atgaccttcaaaggcccttgtatttataggtgaggagtgtcttggtgatcaagggagaaaatagagctgttggacacgtttttgatagttgtccaaagtc |
23896170 |
T |
|
| Q |
220 |
tcagttgatttctcttttcttcttt-aaatagccagaacgttctcataatgttctttctgatttgcatgactttgaaagcactgttgc-ttgcttgcgca |
317 |
Q |
| |
|
||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| || |||||||||||||||||| ||||||||||| |
|
|
| T |
23896171 |
tcaattgatttctcttttcttctttaaaatagccagaacgttctcagaatgttctttctgatttgcctggctttgaaagcactgttgctttgcttgcgca |
23896270 |
T |
|
| Q |
318 |
tgagatcaccaactgtaatgagctgtataacttgctgcccaatgttgatgatgtc |
372 |
Q |
| |
|
|||||| |||| ||||||||||||||||||||||||||||| | |||||||||| |
|
|
| T |
23896271 |
tgagataaccagctgtaatgagctgtataacttgctgcccacttctgatgatgtc |
23896325 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 20 - 372
Target Start/End: Complemental strand, 18420385 - 18420031
Alignment:
| Q |
20 |
gatatagtgcgagagcttggaatttgctttgtttgcgaagagttttgtttgtagtgatgattttcacttagagagatattagcttgcaaaactcttgctt |
119 |
Q |
| |
|
||||||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
18420385 |
gatatagtgagagagctttgaatttgctttgtttgcgaagagctttgtttgtagtgatgattttcactttgagagatattagcttgcaaaactcttgctt |
18420286 |
T |
|
| Q |
120 |
ttgaccttcaaaggcccttgtatttataggtgaggagtgtcttggtgatcaagggagaaaatagagctgttggacacgttttagatagctgtccaaagtc |
219 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
18420285 |
atgaccttcaaaggcccttgtatttataggtgaggagtgtcttggtgaccaagggagaaaatagagctgttggacacgtttttgatagctgtccaaagtc |
18420186 |
T |
|
| Q |
220 |
tcagttgatttctcttttcttcttt-aaatagccagaacgttctcataatgttctttctgatttgcatgactttgaaagcactgttgc-ttgcttgcgca |
317 |
Q |
| |
|
||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||||| ||||||||||| |
|
|
| T |
18420185 |
tcaattgatttctcttttcttctttaaaatagccagaacgttctcagaatgttctttctgatttgcctgacttagaaagcactgttgctttgcttgcgca |
18420086 |
T |
|
| Q |
318 |
tgagatcaccaactgtaatgagctgtataacttgctgcccaatgttgatgatgtc |
372 |
Q |
| |
|
|||||| |||| |||| |||||||||||||||||| ||||| | |||||||||| |
|
|
| T |
18420085 |
tgagataaccagctgtgatgagctgtataacttgcagcccacttctgatgatgtc |
18420031 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 21 - 247
Target Start/End: Complemental strand, 14102022 - 14101797
Alignment:
| Q |
21 |
atatagtgcgagagcttggaatttgctttgtttgcgaagagttttgtttgtagtgatgattttcacttagagaga-tattagcttgcaaaactcttgctt |
119 |
Q |
| |
|
|||||||| ||||| ||||| |||| ||| ||| |||||||||||| |||||||||||||||||||| |||| | |||| |||| ||||||||||| | |
|
|
| T |
14102022 |
atatagtgagagag-ttggagtttgttttaattgtgaagagttttgtatgtagtgatgattttcactt-gagataatatttgctttaaaaactcttgcat |
14101925 |
T |
|
| Q |
120 |
ttgaccttcaaaggcccttgtatttataggtgaggagtgtcttggtgatcaagggagaaaatagagctgttggacacgttttagatagctgtccaaagtc |
219 |
Q |
| |
|
|| || |||||| | |||||||||||||||||||||| ||||||||||||| | |||||||||| ||||||| ||||||| | |||||||||||| |
|
|
| T |
14101924 |
ttaacattcaaaaccaattgtatttataggtgaggagtgccttggtgatcaagagtgaaaatagagttgttggatacgtttttggcagctgtccaaagct |
14101825 |
T |
|
| Q |
220 |
tcagttgatttctcttttcttctttaaa |
247 |
Q |
| |
|
||| |||||||| ||||||||| ||||| |
|
|
| T |
14101824 |
tcaattgatttcacttttcttcattaaa |
14101797 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 12173144 - 12173040
Alignment:
| Q |
138 |
tgtatttataggtgaggagtgtcttggtgatcaagggagaaaatagagctgttggacacgttttagatagctgtccaaagtctcagttgatttctctttt |
237 |
Q |
| |
|
||||||||||| || ||||||| |||||||| || |||||||||| |||||| ||| |||| |||| | |||||||| ||| |||||||| ||||| |
|
|
| T |
12173144 |
tgtatttatagatgtggagtgtgttggtgataaactatgaaaatagagttgttgggcacattttt-atagatatccaaagtttcaattgatttcactttt |
12173046 |
T |
|
| Q |
238 |
cttctt |
243 |
Q |
| |
|
|||||| |
|
|
| T |
12173045 |
cttctt |
12173040 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 271; Significance: 1e-151; HSPs: 4)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 20 - 372
Target Start/End: Complemental strand, 15173152 - 15172798
Alignment:
| Q |
20 |
gatatagtgcgagagcttggaatttgctttgtttgcgaagagttttgtttgtagtgatgattttcacttagagagatattagcttgcaaaactcttgctt |
119 |
Q |
| |
|
||||||||| |||||| |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15173152 |
gatatagtgagagagcatggaattttctttgtttgcgaagagctttgtttgtagtgatgattttcacttagagagatattagcttgcaaaactcttgctt |
15173053 |
T |
|
| Q |
120 |
ttgaccttcaaaggcccttgtatttataggtgaggagtgtcttggtgatcaagggagaaaatagagctgttggacacgttttagatagctgtccaaagtc |
219 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
15173052 |
atgaccttcaaaggcccttgtatttataggtgaggagtgtcttggtgatcaagggagaaaatagagctgttggacacgtttttgatagctgtccaaagtc |
15172953 |
T |
|
| Q |
220 |
tcagttgatttctcttttcttcttt-aaatagccagaacgttctcataatgttctttctgatttgcatgactttgaaagcactgttgc-ttgcttgcgca |
317 |
Q |
| |
|
||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| || |||||||||||||||||| ||||||||||| |
|
|
| T |
15172952 |
tcaattgatttctcttttcttctttaaaatagccagaacgttctcagaatgttctttctgatttgcctggctttgaaagcactgttgctttgcttgcgca |
15172853 |
T |
|
| Q |
318 |
tgagatcaccaactgtaatgagctgtataacttgctgcccaatgttgatgatgtc |
372 |
Q |
| |
|
|||||| |||| || ||||||||||||||||||||||| || | |||||||||| |
|
|
| T |
15172852 |
tgagataaccagctataatgagctgtataacttgctgctcacttctgatgatgtc |
15172798 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 20 - 372
Target Start/End: Complemental strand, 7592839 - 7592485
Alignment:
| Q |
20 |
gatatagtgcgagagcttggaatttgctttgtttgcgaagagttttgtttgtagtgatgattttcacttagagagatattagcttgcaaaactcttgctt |
119 |
Q |
| |
|
||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
7592839 |
gatatagtgagagagcttggaatttgctttgtatgcgaagagctttgtttgtagtgatgattttcactttgagagatattagcttgcaaaactcttgctt |
7592740 |
T |
|
| Q |
120 |
ttgaccttcaaaggcccttgtatttataggtgaggagtgtcttggtgatcaagggagaaaatagagctgttggacacgttttagatagctgtccaaagtc |
219 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
7592739 |
atgaccttcaaaggcccttgtatttataggtgaggagtgtcttggtgaccaagggagaaaatagagctgttggacacgtttttgatagctgtccaaagtc |
7592640 |
T |
|
| Q |
220 |
tcagttgatttctcttttcttcttt-aaatagccagaacgttctcataatgttctttctgatttgcatgactttgaaagcactgttgc-ttgcttgcgca |
317 |
Q |
| |
|
||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||||| ||||||||||| |
|
|
| T |
7592639 |
tcaattgatttctcttttcttctttaaaatagccagaacgttctcagaatgttctttctgatttgcctgacttagaaagcactgttgctttgcttgcgca |
7592540 |
T |
|
| Q |
318 |
tgagatcaccaactgtaatgagctgtataacttgctgcccaatgttgatgatgtc |
372 |
Q |
| |
|
|||||| |||| |||| |||||||||||||||||| ||||| | |||||||||| |
|
|
| T |
7592539 |
tgagataaccagctgtgatgagctgtataacttgcagcccacttctgatgatgtc |
7592485 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 24 - 372
Target Start/End: Complemental strand, 15202571 - 15202224
Alignment:
| Q |
24 |
tagtgcgagagcttggaatttgctttgtttgcgaagagttttgtttgtagtgatgattttcacttagagagatattagcttgcaaaactcttgcttttga |
123 |
Q |
| |
|
||||| ||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| |
|
|
| T |
15202571 |
tagtgagagagcttggaatttcctttgtttgcgaagagctttgtttgtagtgatgattttcacttagagagatat---cttgcaaaactcttgcttatga |
15202475 |
T |
|
| Q |
124 |
ccttcaaaggcccttgtatttataggtgaggagtgtcttggtgatcaagggagaaaatagagctgttggacacgttttagatagctgtccaaagtctcag |
223 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| |
|
|
| T |
15202474 |
ccttcaaaggcccttgtatttataggtgaggagtgtcttggtgatcaagggagaaaatagagttgttggacacgtttttgatagctgtccaaagtctcaa |
15202375 |
T |
|
| Q |
224 |
ttgatttctcttttcttcttt-aaatagccagaacgttctcataatgttctttctgatttgcatgactttgaaagcactgttgc-ttgcttgcgcatgag |
321 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||| || |||| ||||||||||||| ||||||||||||||| |
|
|
| T |
15202374 |
ttgatttctcttttcttctttaaaatagccagaacgttctatgaatgttctttctgatttgtctggctttaaaagcactgttgctttgcttgcgcatgag |
15202275 |
T |
|
| Q |
322 |
atcaccaactgtaatgagctgtataacttgctgcccaatgttgatgatgtc |
372 |
Q |
| |
|
|| |||| |||||||||| |||||||||||||||||| | |||||||||| |
|
|
| T |
15202274 |
ataaccagctgtaatgagttgtataacttgctgcccacttctgatgatgtc |
15202224 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 134 - 372
Target Start/End: Original strand, 4118893 - 4119133
Alignment:
| Q |
134 |
cccttgtatttataggtgaggagtgtcttggtgatcaagggagaaaatagagctgttggacacgttttagatagctgtccaaagtctcagttgatttctc |
233 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| |
|
|
| T |
4118893 |
cccttgtatttataggtgaggagtgtcttggtgatcaagggagaaaatagagctgttggacacgtttttgatagctgtccaaagtctcaattgatttctc |
4118992 |
T |
|
| Q |
234 |
ttttcttcttt-aaatagccagaacgttctcataatgttctttctgatttgcatgactttgaaagcactgttgc-ttgcttgcgcatgagatcaccaact |
331 |
Q |
| |
|
||||||||||| ||||||||| |||||||||| ||||||||||||||||||| || |||||||||||||||||| ||||||||||||||||| |||| || |
|
|
| T |
4118993 |
ttttcttctttaaaatagccaaaacgttctcagaatgttctttctgatttgcctggctttgaaagcactgttgctttgcttgcgcatgagataaccagct |
4119092 |
T |
|
| Q |
332 |
gtaatgagctgtataacttgctgcccaatgttgatgatgtc |
372 |
Q |
| |
|
||||||||||||||||||| ||| || | |||||||||| |
|
|
| T |
4119093 |
ttaatgagctgtataacttgttgctcacttctgatgatgtc |
4119133 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0028 (Bit Score: 267; Significance: 1e-149; HSPs: 2)
Name: scaffold0028
Description:
Target: scaffold0028; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 20 - 372
Target Start/End: Original strand, 94786 - 95140
Alignment:
| Q |
20 |
gatatagtgcgagagcttggaatttgctttgtttgcgaagagttttgtttgtagtgatgattttcacttagagagatattagcttgcaaaactcttgctt |
119 |
Q |
| |
|
||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
94786 |
gatatagtgagagagcttggaatttgctttgtatgcgaagagctttgtttgtagtgatgattttcactttgagagatattagcttgcaaaactcttgctt |
94885 |
T |
|
| Q |
120 |
ttgaccttcaaaggcccttgtatttataggtgaggagtgtcttggtgatcaagggagaaaatagagctgttggacacgttttagatagctgtccaaagtc |
219 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
94886 |
atgaccttcaaaggcccttgtatttataggtgaggagtgtcttggtgaccaagggagaaaatagagctgttggacacgtttttgatagctgtccaaagtc |
94985 |
T |
|
| Q |
220 |
tcagttgatttctcttttcttcttt-aaatagccagaacgttctcataatgttctttctgatttgcatgactttgaaagcactgttgc-ttgcttgcgca |
317 |
Q |
| |
|
||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||||| ||||||||||| |
|
|
| T |
94986 |
tcaattgatttctcttttcttctttaaaatagccagaacgttctcagaatgttctttctgatttgcctgacttagaaagcactgttgctttgcttgcgca |
95085 |
T |
|
| Q |
318 |
tgagatcaccaactgtaatgagctgtataacttgctgcccaatgttgatgatgtc |
372 |
Q |
| |
|
|||||| |||| |||| |||||||||||||||||| ||||| | |||||||||| |
|
|
| T |
95086 |
tgagataaccagctgtgatgagctgtataacttgcagcccacttctgatgatgtc |
95140 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0028; HSP #2
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 20 - 372
Target Start/End: Original strand, 104227 - 104581
Alignment:
| Q |
20 |
gatatagtgcgagagcttggaatttgctttgtttgcgaagagttttgtttgtagtgatgattttcacttagagagatattagcttgcaaaactcttgctt |
119 |
Q |
| |
|
||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
104227 |
gatatagtgagagagcttggaatttgctttgtatgcgaagagctttgtttgtagtgatgattttcactttgagagatattagcttgcaaaactcttgctt |
104326 |
T |
|
| Q |
120 |
ttgaccttcaaaggcccttgtatttataggtgaggagtgtcttggtgatcaagggagaaaatagagctgttggacacgttttagatagctgtccaaagtc |
219 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
104327 |
atgaccttcaaaggcccttgtatttataggtgaggagtgtcttggtgaccaagggagaaaatagagctgttggacacgtttttgatagctgtccaaagtc |
104426 |
T |
|
| Q |
220 |
tcagttgatttctcttttcttcttt-aaatagccagaacgttctcataatgttctttctgatttgcatgactttgaaagcactgttgc-ttgcttgcgca |
317 |
Q |
| |
|
||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||||| ||||||||||| |
|
|
| T |
104427 |
tcaattgatttctcttttcttctttaaaatagccagaacgttctcagaatgttctttctgatttgcctgacttagaaagcactgttgctttgcttgcgca |
104526 |
T |
|
| Q |
318 |
tgagatcaccaactgtaatgagctgtataacttgctgcccaatgttgatgatgtc |
372 |
Q |
| |
|
|||||| |||| |||| |||||||||||||||||| ||||| | |||||||||| |
|
|
| T |
104527 |
tgagataaccagctgtgatgagctgtataacttgcagcccacttctgatgatgtc |
104581 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 263; Significance: 1e-146; HSPs: 10)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 20 - 372
Target Start/End: Original strand, 28352076 - 28352430
Alignment:
| Q |
20 |
gatatagtgcgagagcttggaatttgctttgtttgcgaagagttttgtttgtagtgatgattttcacttagagagatattagcttgcaaaactcttgctt |
119 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
28352076 |
gatatagtgagagagcttggaatttgctttgtttgtgaagagctttgtttgtagtgatgattttcactttgagagatattagcttgcaaaactcttgctt |
28352175 |
T |
|
| Q |
120 |
ttgaccttcaaaggcccttgtatttataggtgaggagtgtcttggtgatcaagggagaaaatagagctgttggacacgttttagatagctgtccaaagtc |
219 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
28352176 |
atgaccttcaaaggcccttgtatttataggtgaggagtgtcttggtgaccaagggagaaaatagagctgttggacacgtttttgatagctgtccaaagtc |
28352275 |
T |
|
| Q |
220 |
tcagttgatttctcttttcttcttt-aaatagccagaacgttctcataatgttctttctgatttgcatgactttgaaagcactgttgc-ttgcttgcgca |
317 |
Q |
| |
|
||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||||| ||||||||||| |
|
|
| T |
28352276 |
tcaattgatttctcttttcttctttaaaatagccagaacgttctcagaatgttctttctgatttgcctgacttagaaagcactgttgctttgcttgcgca |
28352375 |
T |
|
| Q |
318 |
tgagatcaccaactgtaatgagctgtataacttgctgcccaatgttgatgatgtc |
372 |
Q |
| |
|
|||||| |||| |||| ||||| |||||||||||| ||||| | |||||||||| |
|
|
| T |
28352376 |
tgagataaccagctgtgatgagttgtataacttgcagcccacttctgatgatgtc |
28352430 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 20 - 372
Target Start/End: Original strand, 28368009 - 28368362
Alignment:
| Q |
20 |
gatatagtgcgagagcttggaatttgctttgtttgcgaagagttttgtttgtagtgatgattttcacttagagagatattagcttgcaaaactcttgctt |
119 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
28368009 |
gatatagtgagagagcttggaatttgctttgtttgtgaagagctttgtttgtagtgatgattttcactttgagagatattagcttgcaaaactcttgctt |
28368108 |
T |
|
| Q |
120 |
ttgaccttcaaaggcccttgtatttataggtgaggagtgtcttggtgatcaagggagaaaatagagctgttggacacgttttagatagctgtccaaagtc |
219 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
28368109 |
atgaccttcaaaggcccttgtatttataggtgaggagtgtcttggt-accaagggagaaaatagagctgttggacacgtttttgatagctgtccaaagtc |
28368207 |
T |
|
| Q |
220 |
tcagttgatttctcttttcttcttt-aaatagccagaacgttctcataatgttctttctgatttgcatgactttgaaagcactgttgc-ttgcttgcgca |
317 |
Q |
| |
|
||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||||| ||||||||||| |
|
|
| T |
28368208 |
tcaattgatttctcttttcttctttaaaatagccagaacgttctcagaatgttctttctgatttgcctgacttagaaagcactgttgctttgcttgcgca |
28368307 |
T |
|
| Q |
318 |
tgagatcaccaactgtaatgagctgtataacttgctgcccaatgttgatgatgtc |
372 |
Q |
| |
|
|||||| |||| |||| |||||||||||||||||| ||||| | |||||||||| |
|
|
| T |
28368308 |
tgagataaccagctgtgatgagctgtataacttgcagcccacttctgatgatgtc |
28368362 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 20 - 372
Target Start/End: Original strand, 28375827 - 28376180
Alignment:
| Q |
20 |
gatatagtgcgagagcttggaatttgctttgtttgcgaagagttttgtttgtagtgatgattttcacttagagagatattagcttgcaaaactcttgctt |
119 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
28375827 |
gatatagtgagagagcttggaatttgctttgtttgtgaagagctttgtttgtagtgatgattttcactttgagagatattagcttgcaaaactcttgctt |
28375926 |
T |
|
| Q |
120 |
ttgaccttcaaaggcccttgtatttataggtgaggagtgtcttggtgatcaagggagaaaatagagctgttggacacgttttagatagctgtccaaagtc |
219 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
28375927 |
atgaccttcaaaggcccttgtatttataggtgaggagtgtcttggt-accaagggagaaaatagagctgttggacacgtttttgatagctgtccaaagtc |
28376025 |
T |
|
| Q |
220 |
tcagttgatttctcttttcttcttt-aaatagccagaacgttctcataatgttctttctgatttgcatgactttgaaagcactgttgc-ttgcttgcgca |
317 |
Q |
| |
|
||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||||| ||||||||||| |
|
|
| T |
28376026 |
tcaattgatttctcttttcttctttaaaatagccagaacgttctcagaatgttctttctgatttgcctgacttagaaagcactgttgctttgcttgcgca |
28376125 |
T |
|
| Q |
318 |
tgagatcaccaactgtaatgagctgtataacttgctgcccaatgttgatgatgtc |
372 |
Q |
| |
|
|||||| |||| |||| |||||||||||||||||| ||||| | |||||||||| |
|
|
| T |
28376126 |
tgagataaccagctgtgatgagctgtataacttgcagcccacttctgatgatgtc |
28376180 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 20 - 372
Target Start/End: Original strand, 28383649 - 28384002
Alignment:
| Q |
20 |
gatatagtgcgagagcttggaatttgctttgtttgcgaagagttttgtttgtagtgatgattttcacttagagagatattagcttgcaaaactcttgctt |
119 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
28383649 |
gatatagtgagagagcttggaatttgctttgtttgtgaagagctttgtttgtagtgatgattttcactttgagagatattagcttgcaaaactcttgctt |
28383748 |
T |
|
| Q |
120 |
ttgaccttcaaaggcccttgtatttataggtgaggagtgtcttggtgatcaagggagaaaatagagctgttggacacgttttagatagctgtccaaagtc |
219 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
28383749 |
atgaccttcaaaggcccttgtatttataggtgaggagtgtcttggt-accaagggagaaaatagagctgttggacacgtttttgatagctgtccaaagtc |
28383847 |
T |
|
| Q |
220 |
tcagttgatttctcttttcttcttt-aaatagccagaacgttctcataatgttctttctgatttgcatgactttgaaagcactgttgc-ttgcttgcgca |
317 |
Q |
| |
|
||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||||| ||||||||||| |
|
|
| T |
28383848 |
tcaattgatttctcttttcttctttaaaatagccagaacgttctcagaatgttctttctgatttgcctgacttagaaagcactgttgctttgcttgcgca |
28383947 |
T |
|
| Q |
318 |
tgagatcaccaactgtaatgagctgtataacttgctgcccaatgttgatgatgtc |
372 |
Q |
| |
|
|||||| |||| |||| |||||||||||||||||| ||||| | |||||||||| |
|
|
| T |
28383948 |
tgagataaccagctgtgatgagctgtataacttgcagcccacttctgatgatgtc |
28384002 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 52 - 372
Target Start/End: Original strand, 38529524 - 38529846
Alignment:
| Q |
52 |
ttgcgaagagttttgtttgtagtgatgattttcacttagagagatattagcttgcaaaactcttgcttttgaccttcaaaggcccttgtatttataggtg |
151 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | ||||||||||||||||||||||||| | |
|
|
| T |
38529524 |
ttgcgaagagctttgtttgtagtgatgattttcacttagagagatattagcttgcaaaactcttgcttataatcttcaaaggcccttgtatttataggcg |
38529623 |
T |
|
| Q |
152 |
aggagtgtcttggtgatcaagggagaaaatagagctgttggacacgttttagatagctgtccaaagtctcagttgatttc-tcttttcttcttt-aaata |
249 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||| |||||||| | ||||||||||| ||||| |
|
|
| T |
38529624 |
aggagtgtcttggtgatcaagggagaaaatagagttgttggacacgttttttatagttgtccaaagtctcaattgatttctttttttcttctttaaaata |
38529723 |
T |
|
| Q |
250 |
gccagaacgttctcataatgttctttctgatttgcatgactttgaaagcactgttgcttgcttgcgcatgagatcaccaactgtaatgagctgtataact |
349 |
Q |
| |
|
|||||| |||||||| |||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||| |||| |||||||||| ||| ||||| |
|
|
| T |
38529724 |
gccagaccgttctcagaatgttctttctgaattgtctgactttgaaagcactgttgcttgcttgcgcgtgagagaaccagctgtaatgagttgtttaact |
38529823 |
T |
|
| Q |
350 |
tgctgcccaatgttgatgatgtc |
372 |
Q |
| |
|
|| |||||||||||||||||||| |
|
|
| T |
38529824 |
tgttgcccaatgttgatgatgtc |
38529846 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 23 - 286
Target Start/End: Complemental strand, 4951426 - 4951162
Alignment:
| Q |
23 |
atagtgcgagagcttggaatttgctttgtttgcgaagagttttgtttgtagtgatgattttcacttagagaga-tattagcttgcaaaactcttgctttt |
121 |
Q |
| |
|
|||||| |||| ||||||||||||||||||||| ||||||||||||||||||| |||||||||||| |||||| |||| ||||||||||| | ||| |
|
|
| T |
4951426 |
atagtgagagaacttggaatttgctttgtttgcaaagagttttgtttgtagtggtgattttcactt-gagagaatatttacttgcaaaacttctatcttt |
4951328 |
T |
|
| Q |
122 |
gaccttcaaaggcccttgtatttataggtgaggagtgtcttggtgatcaagggagaaaatagagctgttggacacgttttagatagctgtccaaagtctc |
221 |
Q |
| |
|
||||||||| | |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| |||| ||||| |||||||| |
|
|
| T |
4951327 |
aaccttcaaaaccacttgtatttataggtgaggagtgtcttggtgatcaagggagaaactagagttgttggacacgtttttgataactgtctaaagtctc |
4951228 |
T |
|
| Q |
222 |
agttgatttctcttttcttctt-taaatagccagaacgttctcataatgttctttctgatttgcat |
286 |
Q |
| |
|
| |||||||||||||||||||| |||||| ||||||||||||||||||| | |||||||||||| |
|
|
| T |
4951227 |
aattgatttctcttttcttcttaaaaataggaagaacgttctcataatgttatgtctgatttgcat |
4951162 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 70 - 273
Target Start/End: Original strand, 7784561 - 7784764
Alignment:
| Q |
70 |
gtagtgatgattttcacttagagaga-tattagcttgcaaaactcttgcttttgaccttcaaaggcccttgtatttataggtgaggagtgtcttggtgat |
168 |
Q |
| |
|
||||||||||||||||||| |||||| || | |||| ||||||||| |||| ||||||| | | |||||||||||||||||| |||| ||||||||| |
|
|
| T |
7784561 |
gtagtgatgattttcactt-gagagaatacttgcttttaaaactcttactttcaaccttcataaccacttgtatttataggtgagcagtgccttggtgat |
7784659 |
T |
|
| Q |
169 |
caagggagaaaatagagctgttggacacgttttagatagctgtccaaagtctcagttgatttctcttttcttctttaaatagccagaacgttctcataat |
268 |
Q |
| |
|
|||| | |||||||| | ||||||||| ||||| | |||| ||||||| ||| |||||||| ||||||||||||||| || ||||| ||||| | ||| |
|
|
| T |
7784660 |
caagagtgaaaatagtgttgttggacatgtttttggcagctttccaaagcttcaattgatttcacttttcttctttaaacagacagaatgttcttagaat |
7784759 |
T |
|
| Q |
269 |
gttct |
273 |
Q |
| |
|
||||| |
|
|
| T |
7784760 |
gttct |
7784764 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 136 - 243
Target Start/End: Complemental strand, 27169090 - 27168983
Alignment:
| Q |
136 |
cttgtatttataggtgaggagtgtcttggtgatcaagggagaaaatagagctgttggacacgttttagatagctgtccaaagtctcagttgatttctctt |
235 |
Q |
| |
|
||||| ||||||||||||||||| ||||||||||||| | |||||||||| |||||||||||||| |||||||||| | ||| |||||||| ||| |
|
|
| T |
27169090 |
cttgtgtttataggtgaggagtgacttggtgatcaagagtgaaaatagaggtgttggacacgtttagtgcagctgtccaacgattcaattgatttcactt |
27168991 |
T |
|
| Q |
236 |
ttcttctt |
243 |
Q |
| |
|
|||||||| |
|
|
| T |
27168990 |
ttcttctt |
27168983 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 243
Target Start/End: Original strand, 4361875 - 4362085
Alignment:
| Q |
30 |
gagagcttggaatttgctttgtttgcgaagagttttgtttgtagtgatgattttcacttagagaga-tattagcttgcaaaactcttgcttttgaccttc |
128 |
Q |
| |
|
|||||||||| ||||| |||||||| |||||| || || ||||||||||||||| ||| ||||||| | || |||| ||||| |||| ||| | ||| |
|
|
| T |
4361875 |
gagagcttggtatttg-tttgtttgtgaagagctt-gtatgtagtgatgatttttact-agagagaatgtttgctttcaaaattctttatttgaagcttt |
4361971 |
T |
|
| Q |
129 |
aaaggcccttgtatttataggtgaggagtgtcttggtgatcaagggagaaaatagagctgttggacacgttttagatagctgtccaaagtctcagttgat |
228 |
Q |
| |
|
||| | |||||||||||| || |||||| ||| ||||||||| | ||||| |||| |||||||||| |||| | |||||||||||| ||| ||| | |
|
|
| T |
4361972 |
aaaaccacttgtatttatatatgtggagtgacttagtgatcaagtgtgaaaaaagagttgttggacacatttttg-cagctgtccaaagcttcaattggt |
4362070 |
T |
|
| Q |
229 |
ttctcttttcttctt |
243 |
Q |
| |
|
||| ||||||||||| |
|
|
| T |
4362071 |
ttcacttttcttctt |
4362085 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 88
Target Start/End: Complemental strand, 27169205 - 27169138
Alignment:
| Q |
20 |
gatatagtgcgagagcttggaatttgctttgtttgcgaagagttttgtttgtagtgatgattttcactt |
88 |
Q |
| |
|
|||||| || ||||||||| ||||| |||||||| ||||| ||||| |||||||||||||||||||| |
|
|
| T |
27169205 |
gatataatgagagagcttgaaatttt-tttgtttgtgaagaactttgtatgtagtgatgattttcactt |
27169138 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0482 (Bit Score: 255; Significance: 1e-142; HSPs: 1)
Name: scaffold0482
Description:
Target: scaffold0482; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 20 - 372
Target Start/End: Complemental strand, 3366 - 3012
Alignment:
| Q |
20 |
gatatagtgcgagagcttggaatttgctttgtttgcgaagagttttgtttgtagtgatgattttcacttagagagatattagcttgcaaaactcttgctt |
119 |
Q |
| |
|
||||||||| |||||||||||||||||||||| || |||||| |||||||||||||||||||||||||| || |||||||||||| |||||||||||||| |
|
|
| T |
3366 |
gatatagtgagagagcttggaatttgctttgtatgtgaagagctttgtttgtagtgatgattttcactttgacagatattagcttacaaaactcttgctt |
3267 |
T |
|
| Q |
120 |
ttgaccttcaaaggcccttgtatttataggtgaggagtgtcttggtgatcaagggagaaaatagagctgttggacacgttttagatagctgtccaaagtc |
219 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
3266 |
atgaccttcaaaggcccttgtatttataggtgaggagtgtcttggtgaccaagggagaaaatagagctgttggacacgtttttgatagctgtccaaagta |
3167 |
T |
|
| Q |
220 |
tcagttgatttctcttttcttcttt-aaatagccagaacgttctcataatgttctttctgatttgcatgactttgaaagcactgttgc-ttgcttgcgca |
317 |
Q |
| |
|
|| ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |
|
|
| T |
3166 |
tcttttgatttctcttttcttctttaaaatagccagaacgttctcagaatgttctttctgatttgcctgactttgaaagcactgttgctttgcttgcgca |
3067 |
T |
|
| Q |
318 |
tgagatcaccaactgtaatgagctgtataacttgctgcccaatgttgatgatgtc |
372 |
Q |
| |
|
|||||| |||| ||||||||||||||||||||||| ||||| | |||||||||| |
|
|
| T |
3066 |
tgagataaccagctgtaatgagctgtataacttgcagcccacttctgatgatgtc |
3012 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 255; Significance: 1e-142; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 20 - 372
Target Start/End: Original strand, 7789433 - 7789787
Alignment:
| Q |
20 |
gatatagtgcgagagcttggaatttgctttgtttgcgaagagttttgtttgtagtgatgattttcacttagagagatattagcttgcaaaactcttgctt |
119 |
Q |
| |
|
||||||||| |||||||||||||||||||||| || |||||| |||||||||||||||||||||||||| || |||||||||||| |||||||||||||| |
|
|
| T |
7789433 |
gatatagtgagagagcttggaatttgctttgtatgtgaagagctttgtttgtagtgatgattttcactttgacagatattagcttacaaaactcttgctt |
7789532 |
T |
|
| Q |
120 |
ttgaccttcaaaggcccttgtatttataggtgaggagtgtcttggtgatcaagggagaaaatagagctgttggacacgttttagatagctgtccaaagtc |
219 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
7789533 |
atgaccttcaaaggcccttgtatttataggtgaggagtgtcttggtgaccaagggagaaaatagagctgttggacacgtttttgatagctgtccaaagta |
7789632 |
T |
|
| Q |
220 |
tcagttgatttctcttttcttcttt-aaatagccagaacgttctcataatgttctttctgatttgcatgactttgaaagcactgttgc-ttgcttgcgca |
317 |
Q |
| |
|
|| ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |
|
|
| T |
7789633 |
tcttttgatttctcttttcttctttaaaatagccagaacgttctcagaatgttctttctgatttgcctgactttgaaagcactgttgctttgcttgcgca |
7789732 |
T |
|
| Q |
318 |
tgagatcaccaactgtaatgagctgtataacttgctgcccaatgttgatgatgtc |
372 |
Q |
| |
|
|||||| |||| ||||||||||||||||||||||| ||||| | |||||||||| |
|
|
| T |
7789733 |
tgagataaccagctgtaatgagctgtataacttgcagcccacttctgatgatgtc |
7789787 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 20 - 105
Target Start/End: Complemental strand, 20713903 - 20713818
Alignment:
| Q |
20 |
gatatagtgcgagagcttggaatttgctttgtttgcgaagagttttgtttgtagtgatgattttcacttagagagatattagcttg |
105 |
Q |
| |
|
||||||||| ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20713903 |
gatatagtgagagagcttggaattttctttgtttgcgaagagctttgtttgtagtgatgattttcacttagagagatattagcttg |
20713818 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 197
Target Start/End: Complemental strand, 15827475 - 15827294
Alignment:
| Q |
20 |
gatatagtgcgagagcttggaatttgctttgtttgcgaagagttttgtttgtagtgatgattttcactt-agagagatattagcttgcaaaactcttgc- |
117 |
Q |
| |
|
|||||| || || ||||||||||||| |||||||| ||| | ||||| |||||||||||||||||||| ||||| || | |||| |||||||||||| |
|
|
| T |
15827475 |
gatataatgagatagcttggaatttg-tttgtttgtgaaaaactttgtatgtagtgatgattttcacttgagaga-atgcttgctttcaaaactcttgct |
15827378 |
T |
|
| Q |
118 |
----ttttgaccttcaaaggcccttgtatttataggtgaggagtgtcttggtgatcaagggagaaaatagagctgttggacacg |
197 |
Q |
| |
|
||| |||||||| | ||||||||||||||||||||||| ||| | |||||| | ||||||||| |||||| |||| |
|
|
| T |
15827377 |
ttaatttcaaccttcaagaccacttgtatttataggtgaggagtgatttgttaatcaagagtgaaaatagatttgttggtcacg |
15827294 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 88
Target Start/End: Complemental strand, 15833787 - 15833720
Alignment:
| Q |
20 |
gatatagtgcgagagcttggaatttgctttgtttgcgaagagttttgtttgtagtgatgattttcactt |
88 |
Q |
| |
|
|||||| || ||| ||||| |||||| |||||||| || ||| ||||| |||||||||||||||||||| |
|
|
| T |
15833787 |
gatataatgagagggcttgcaatttg-tttgtttgtgaggagctttgtatgtagtgatgattttcactt |
15833720 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0040 (Bit Score: 244; Significance: 1e-135; HSPs: 2)
Name: scaffold0040
Description:
Target: scaffold0040; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 63 - 372
Target Start/End: Original strand, 31205 - 31516
Alignment:
| Q |
63 |
tttgtttgtagtgatgattttcacttagagagatattagcttgcaaaactcttgcttttgaccttcaaaggcccttgtatttataggtgaggagtgtctt |
162 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31205 |
tttgtttgtagtgatgattttcacttagagagatattagcttgcaaaactcttgcttatgaccttcaaaggcccttgtatttataggtgaggagtgtctt |
31304 |
T |
|
| Q |
163 |
ggtgatcaagggagaaaatagagctgttggacacgttttagatagctgtccaaagtctcagttgatttctcttttcttcttt-aaatagccagaacgttc |
261 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
31305 |
ggtgaacaagggagaaaatagagctgttggacacgtttttgatagctgtccaaagtctcaattgatttctcttttcttctttaaaatagccagaacgttc |
31404 |
T |
|
| Q |
262 |
tcataatgttctttctgatttgcatgactttgaaagcactgttgc-ttgcttgcgcatgagatcaccaactgtaatgagctgtataacttgctgcccaat |
360 |
Q |
| |
|
||| ||||||||||||||||||| || |||||||||||||||||| |||||||| |||||||| |||| ||||||||||||||||||||||||||||| | |
|
|
| T |
31405 |
tcagaatgttctttctgatttgcctggctttgaaagcactgttgctttgcttgcacatgagataaccagctgtaatgagctgtataacttgctgcccact |
31504 |
T |
|
| Q |
361 |
gttgatgatgtc |
372 |
Q |
| |
|
|||||||||| |
|
|
| T |
31505 |
tctgatgatgtc |
31516 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0040; HSP #2
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 20 - 315
Target Start/End: Complemental strand, 9879 - 9583
Alignment:
| Q |
20 |
gatatagtgcgagagcttggaatttgctttgtttgcgaagagttttgtttgtagtgatgattttcacttagagaga-tattagcttgcaaaactcttgct |
118 |
Q |
| |
|
||||||||| ||||||||| |||||||||||||||||||||| |||||||||||||||| ||||||||| |||||| |||| ||| |||||||||||| |
|
|
| T |
9879 |
gatatagtgagagagcttgaaatttgctttgtttgcgaagagctttgtttgtagtgatgtttttcactt-gagagaatattttctttcaaaactcttgcc |
9781 |
T |
|
| Q |
119 |
tttgaccttcaaaggcccttgtatttataggtgaggagtgtcttggtgatcaagggagaaaatagagctgttggacacgttttagatagctgtccaaagt |
218 |
Q |
| |
|
||| ||||||||| |||||| ||||||||||||||||||||||||||||||| |||||||||| || ||||||| |||| |||||||||||||||| |
|
|
| T |
9780 |
tttaaccttcaaaactatttgtatatataggtgaggagtgtcttggtgatcaagggtgaaaatagagttgatggacacatttttgatagctgtccaaagt |
9681 |
T |
|
| Q |
219 |
ctcagttgatttctcttttcttctt-taaatagccagaacgttctcataatgttctttctgatttgcatgactttgaaagcactgttgcttgcttgcg |
315 |
Q |
| |
|
|||| ||| |||| ||||||||||| ||||||| |||||||||||| |||||||| |||||||||| | ||||| || |||||||||||||||| |
|
|
| T |
9680 |
ctcatttgttttcacttttcttcttaaaaatagctagaacgttctcagaatgttctgtctgatttgcctagctttgcttgctctgttgcttgcttgcg |
9583 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0233 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: scaffold0233
Description:
Target: scaffold0233; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 63 - 372
Target Start/End: Original strand, 26502 - 26812
Alignment:
| Q |
63 |
tttgtttgtagtgatgattttcacttagagagatattagcttgcaaaactcttgcttttgaccttcaaaggcccttgtatttataggtgaggagtgtctt |
162 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26502 |
tttgtttgtagtgatgattttcacttagagagatattagcttgcaaaactcttacttatgaccttcaaaggcccttgtatttataggtgaggagtgtctt |
26601 |
T |
|
| Q |
163 |
ggtgatcaagggagaaaatagagctgttggacacgttttagatagctgtccaaagtctcagttgatttctcttttcttcttt-aaatagccagaacgttc |
261 |
Q |
| |
|
||||||||||||||||||||||| |||||||||| |||| ||||||| |||||||||||| ||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
26602 |
ggtgatcaagggagaaaatagagatgttggacacatttttgatagctatccaaagtctcaattgatttctcttttcttctttaaaatagccagaacgttc |
26701 |
T |
|
| Q |
262 |
tcataatgttctttctgatttgcatgactttgaaagcactgttgcttgcttgcgcatgagatcaccaactgtaatgagctgtataacttgctgcccaatg |
361 |
Q |
| |
|
||| |||||||||||||||||| || ||||||||||||||||||||| |||||||||| | | || |||||||||||||||||||||||||||||||| |
|
|
| T |
26702 |
tcagaatgttctttctgatttgtctggctttgaaagcactgttgcttgtatgcgcatgagttaatcagctgtaatgagctgtataacttgctgcccaatg |
26801 |
T |
|
| Q |
362 |
ttgatgatgtc |
372 |
Q |
| |
|
|||||||||| |
|
|
| T |
26802 |
ctgatgatgtc |
26812 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0001 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: scaffold0001
Description:
Target: scaffold0001; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 65 - 372
Target Start/End: Complemental strand, 413086 - 412777
Alignment:
| Q |
65 |
tgtttgtagtgatgattttcacttagagagatattagcttgcaaaactcttgcttttgaccttcaaaggcccttgtatttataggtgaggagtgtcttgg |
164 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
413086 |
tgtttgtagtgatgattttcactttgagagatattagcttgcaaaactcttgcttatgaccttcaaaggcccttgtatttataggtgaggagtgtcttgg |
412987 |
T |
|
| Q |
165 |
tgatcaagggagaaaatagagctgttggacacgttttagatagctgtccaaagtctcagttgatttctcttttcttcttt-aaatagccagaacgttctc |
263 |
Q |
| |
|
||||||||||||||||||||| |||||||| | |||| |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
412986 |
tgatcaagggagaaaatagagttgttggactcttttttgatagctgtccaaagtctcaattgatttctcttttcttctttaaaatagccagaacgttctc |
412887 |
T |
|
| Q |
264 |
ataatgttctttctgatttgcatgactttgaaagcactgttgc-ttgcttgcgcatgagatcaccaactgtaatgagctgtataacttgctgcccaatgt |
362 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||| |||| |||||||| |||||||| |||| ||||||||||||||||||||||||||||| | |
|
|
| T |
412886 |
ataatgttctttctgatttgtctgactttgaaagcactattgctttgcttgcacatgagataaccagctgtaatgagctgtataacttgctgcccacttc |
412787 |
T |
|
| Q |
363 |
tgatgatgtc |
372 |
Q |
| |
|
|||||||||| |
|
|
| T |
412786 |
tgatgatgtc |
412777 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 229; Significance: 1e-126; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 20 - 351
Target Start/End: Original strand, 24023096 - 24023428
Alignment:
| Q |
20 |
gatatagtgcgagagcttggaatttgctttgtttgcgaagagttttgtttgtagtgatgattttcacttagagagatattagcttgcaaaactcttgctt |
119 |
Q |
| |
|
||||||||| |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| || |
|
|
| T |
24023096 |
gatatagtgagagagcttggaatttgctttatttgcgaagagctttgtttgtagtgatgattttcacttagagagatattagcttgcaaaagtcttggtt |
24023195 |
T |
|
| Q |
120 |
ttgaccttcaaaggcccttgtatttataggtgaggagtgtcttggtgatcaagggagaaaatagagctgttggacacgttttagatagctgtccaaagtc |
219 |
Q |
| |
|
| ||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||| |
|
|
| T |
24023196 |
ataaccttcaaaagcccttgtatttataggtgaggagtgtcttagtgatcaagggagaaaatagagttgttggacacgtttttgatagctatccaaagtc |
24023295 |
T |
|
| Q |
220 |
tcagttgatttctcttttcttcttt-aaatagccagaacgttctcataatgttctttctgatttgcatgactttgaaagcactgttgcttgcttgcgcat |
318 |
Q |
| |
|
||| ||||||||||||||||||||| |||||||||||||||||| | |||||||| ||||| |||| | ||||||||||||||||||||| ||||||| | |
|
|
| T |
24023296 |
tcaattgatttctcttttcttctttaaaatagccagaacgttcttagaatgttctgtctgaattgccttactttgaaagcactgttgctttcttgcgcgt |
24023395 |
T |
|
| Q |
319 |
gagatcaccaactgtaatgagctgtataacttg |
351 |
Q |
| |
|
|||| ||||||||||||||||||| ||||||| |
|
|
| T |
24023396 |
gagagaaccaactgtaatgagctgtttaacttg |
24023428 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 20 - 372
Target Start/End: Original strand, 31710820 - 31711162
Alignment:
| Q |
20 |
gatatagtgcgagagcttggaatttgctttgtttgcgaagagttttgtttgtagtgatgattttcacttagagagatattagcttgcaaaactcttgctt |
119 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
31710820 |
gatatagtgagagagcttggaatttgctttgtttgcgaagagctttgtttgtagtgatgattttcacttagagagatattagcttgcaaaactcttactt |
31710919 |
T |
|
| Q |
120 |
ttgaccttcaaaggcccttgtatttataggtgaggagtgtcttggtgatcaagggagaaaatagagctgttggacacgttttagatagctgtccaaagtc |
219 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| |||||| ||||| ||||||||||| |
|
|
| T |
31710920 |
atgaccttcaaaggcccttgtatttataggtgaggagtgtcttggtgatcaagtgagaaaatagagttgttggacgcgtttttgatagttgtccaaagtc |
31711019 |
T |
|
| Q |
220 |
tcagttgatttctcttttcttctt-taaatagccagaacgttctcataatgttctttctgatttgcatgactttgaaagcactgttgcttgcttgcgcat |
318 |
Q |
| |
|
||| |||||||||||||||||||| |||||||||| ||||||||||||||||| | || |||||||||||||||||||||||||||| | |
|
|
| T |
31711020 |
tcaattgatttctcttttcttcttaaaaatagccag-----------aatgttctttctgattttcctggctttgaaagcactgttgcttgcttgcgcgt |
31711108 |
T |
|
| Q |
319 |
gagatcaccaactgtaatgagctgtataacttgctgcccaatgttgatgatgtc |
372 |
Q |
| |
|
|||| |||| ||||||||||||||||||||| ||||||||| |||||||||| |
|
|
| T |
31711109 |
gagagaaccagttgtaatgagctgtataacttgttgcccaatgctgatgatgtc |
31711162 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 20 - 372
Target Start/End: Complemental strand, 14272888 - 14272537
Alignment:
| Q |
20 |
gatatagtgcgagagcttggaatttgctttgtttgcgaagagttttgtttgtagtgatgattttcacttagagaga-tattagcttgcaaaactcttgct |
118 |
Q |
| |
|
||||||||| ||||| ||||| |||| |||||||| |||||||||||| ||||||||||||||||| | | ||||| | || |||| |||||||||| | |
|
|
| T |
14272888 |
gatatagtgagagag-ttggagtttgttttgtttgtgaagagttttgtatgtagtgatgattttcattca-agagaatgtttgctttcaaaactcttacc |
14272791 |
T |
|
| Q |
119 |
tttgaccttcaaaggcccttgtatttataggtgaggagtgtcttggtgatcaagggagaaaatagagctgttggacacgttttagatagctgtccaaagt |
218 |
Q |
| |
|
||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| |
|
|
| T |
14272790 |
tttaaccttcaaagacccttgtatttataggtgaggagtgtcttggtgatcaagggagaaaatagagttgttggacacgtttttgatagctgtccaaagt |
14272691 |
T |
|
| Q |
219 |
ctcagttgatttctcttttcttctt-taaatagccagaacgttctcataatgttctttctgatttgcatgactttgaaagcactgttgcttgcttgcgca |
317 |
Q |
| |
|
|||| |||||||||||||||| ||| ||||||||||||||||| ||| |||||||| ||||| |||| | |||||||||||| ||||||||||||||| |
|
|
| T |
14272690 |
ctcaattgatttctcttttctacttataaatagccagaacgttttcagaatgttctgtctgaattgcctaactttgaaagcattgttgcttgcttgcgag |
14272591 |
T |
|
| Q |
318 |
tgagatcaccaactgtaatgagctgtataacttgctgcccaatgttgatgatgtc |
372 |
Q |
| |
|
| || ||||||||||||||| ||| | ||||| |||||||||||||| ||||| |
|
|
| T |
14272590 |
ggggagaaccaactgtaatgagttgt-ttacttgttgcccaatgttgattatgtc |
14272537 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 131; Significance: 7e-68; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 20 - 360
Target Start/End: Original strand, 15810335 - 15810676
Alignment:
| Q |
20 |
gatatagtgcgagagcttggaatttgctttgtttgcgaagagttttgtttgtagtgatgattttcacttagagaga-tattagcttgcaaaactcttgct |
118 |
Q |
| |
|
||||||||| ||||||||| |||||||||||||||||| ||| |||||||||||||||| ||||||||| |||||| |||| ||| |||||||||||| |
|
|
| T |
15810335 |
gatatagtgagagagcttgaaatttgctttgtttgcgaggagctttgtttgtagtgatgtttttcactt-gagagaatattttctttcaaaactcttgcc |
15810433 |
T |
|
| Q |
119 |
tttgaccttcaaaggcccttgtatttataggtgaggagtgtcttggtgatcaagggagaaaatagagctgttggacacgttttagatagctgtccaaagt |
218 |
Q |
| |
|
||| | |||||| | ||||||||||||||||| |||||||||||||||||| || | |||||||| |||||||||| |||| |||||||||||||||| |
|
|
| T |
15810434 |
tttaaaattcaaaaccacttgtatttataggtgatgagtgtcttggtgatcaatggtgcaaatagagttgttggacacatttttgatagctgtccaaagt |
15810533 |
T |
|
| Q |
219 |
ctcagttgatttctcttttcttctt-taaatagccagaacgttctcataatgttctttctgatttgcatgactttgaaagcactgttgcttgcttgcgca |
317 |
Q |
| |
|
| | |||||||| |||||||||| |||||| ||||| | ||||| |||||| | |||||||||||| |||||| ||||||||||||||||||| |
|
|
| T |
15810534 |
cctaattgatttcatttttcttcttaaaaatagacagaatgatctcagaatgttatgtctgatttgcataactttgcttgcactgttgcttgcttgcgag |
15810633 |
T |
|
| Q |
318 |
tgagatcaccaactgtaatgagctgtataacttgctgcccaat |
360 |
Q |
| |
|
||||| |||| |||||||||||||| | ||||| ||| |||| |
|
|
| T |
15810634 |
tgagagaaccagctgtaatgagctgttttacttgttgctcaat |
15810676 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 109 - 284
Target Start/End: Original strand, 41000821 - 41001000
Alignment:
| Q |
109 |
aactcttgcttttgaccttcaaaggcccttgtatttataggtgaggagtgtcttggtgatcaagggagaaaatagagctgttggacacgttttag---at |
205 |
Q |
| |
|
||||| |||||| ||||||||| | ||||||||||||||||||||||| ||||||||||||| | |||||||||| ||||||||||||||| || |
|
|
| T |
41000821 |
aactcatgctttcaaccttcaaaaccacttgtatttataggtgaggagtgccttggtgatcaagagtgaaaatagagatgttggacacgtttttttttat |
41000920 |
T |
|
| Q |
206 |
agctgtccaaagtctcagttgatttctcttttcttctttaaa-tagccagaacgttctcataatgttctttctgatttgc |
284 |
Q |
| |
|
|| |||||||||||||| |||||||| ||||||||||| ||| | | ||||| | ||||| |||||| | |||||||||| |
|
|
| T |
41000921 |
agatgtccaaagtctcatttgatttcacttttcttcttaaaattgggcagaaagatctcagaatgttatgtctgatttgc |
41001000 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 20 - 88
Target Start/End: Original strand, 40999387 - 40999455
Alignment:
| Q |
20 |
gatatagtgcgagagcttggaatttgctttgtttgcgaagagttttgtttgtagtgatgattttcactt |
88 |
Q |
| |
|
||||||||| ||||||||||||||| |||||||||||||||| ||||| |||||||||| ||||||||| |
|
|
| T |
40999387 |
gatatagtgagagagcttggaatttactttgtttgcgaagagctttgtatgtagtgatgtttttcactt |
40999455 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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