View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF17707_high_8 (Length: 237)
Name: NF17707_high_8
Description: NF17707
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17707_high_8 |
 |  |
|
| [»] scaffold0005 (1 HSPs) |
 |  |  |
|
| [»] scaffold0087 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr7 (Bit Score: 185; Significance: 1e-100; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 39497282 - 39497062
Alignment:
| Q |
1 |
tgctttggtttttgttccattatctcattttctttatacatcaatggttgtcttataagttgtcattgaaatgattgttcaaataacacaagtcattaaa |
100 |
Q |
| |
|
||||||||||||||| ||||||| ||||||||||| ||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||| |
|
|
| T |
39497282 |
tgctttggtttttgtaccattatttcattttctttgtacattaatggttgtcttataagttatcattgaaatggttgttcaaataacacaactcattaaa |
39497183 |
T |
 |
| Q |
101 |
aaatagcacaattaatttttaataatttaggctgattcaactttccacttgagtgtatttcaagtaatcttaggagaacattgagtttccttcatcatga |
200 |
Q |
| |
|
||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39497182 |
aaatagcccaattaatttttaataacttaggctgattcaactttccacttgagtgtatttcaagtaatcttaggagaacattgagtttccttcatcatga |
39497083 |
T |
 |
| Q |
201 |
ggtaacctctagatcaaatct |
221 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
39497082 |
ggtaacctctagatcaaatct |
39497062 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 91
Target Start/End: Original strand, 39111000 - 39111043
Alignment:
| Q |
48 |
ttgtcttataagttgtcattgaaatgattgttcaaataacacaa |
91 |
Q |
| |
|
|||||| ||||||||||||| |||| |||||||||||||||||| |
|
|
| T |
39111000 |
ttgtctcataagttgtcattaaaataattgttcaaataacacaa |
39111043 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 91
Target Start/End: Original strand, 47356101 - 47356164
Alignment:
| Q |
28 |
ttttctttatacatcaatggttgtcttataagttgtcattgaaatgattgttcaaataacacaa |
91 |
Q |
| |
|
||||||||||| ||||||||||||| ||||||||||| ||||| ||||| ||||||||||| |
|
|
| T |
47356101 |
ttttctttataaatcaatggttgtcccgtaagttgtcatacaaatggttgttaaaataacacaa |
47356164 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 47; Significance: 6e-18; HSPs: 8)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 86
Target Start/End: Complemental strand, 25509157 - 25509075
Alignment:
| Q |
4 |
tttggtttttgttccattatctcattttctttatacatcaatggttgtcttataagttgtcattgaaatgattgttcaaataa |
86 |
Q |
| |
|
|||||||||||| || || |||||||||||| || ||||||| |||||| ||||||||||||| |||||||||||||||||| |
|
|
| T |
25509157 |
tttggtttttgtgtcaatacctcattttctttgtatatcaatgattgtctaataagttgtcattaaaatgattgttcaaataa |
25509075 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 43769736 - 43769796
Alignment:
| Q |
28 |
ttttctttatacatcaatggttgtcttataagttgtcattgaaatgattgttcaaataaca |
88 |
Q |
| |
|
||||||||||| || ||||||||||| ||||||||||| |||||||| ||||||||||| |
|
|
| T |
43769736 |
ttttctttataaattaatggttgtctcataagttgtcaaccaaatgattattcaaataaca |
43769796 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 19947725 - 19947630
Alignment:
| Q |
1 |
tgctttggtttttgttccattatctcattttctttatacatcaatggttgtcttataagttgtcattgaaatgattgttcaaataacacaagtcat |
96 |
Q |
| |
|
||||||||||||||| ||| || ||| ||||||||||| | ||||||||| | |||||||||| |||| | |||||||||||||||| |||| |
|
|
| T |
19947725 |
tgctttggtttttgtcccaatacctccttttctttataaaattttggttgtctcaaaagttgtcatataaataaatgttcaaataacacaactcat |
19947630 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 90
Target Start/End: Complemental strand, 29706658 - 29706595
Alignment:
| Q |
27 |
attttctttatacatcaatggttgtcttataagttgtcattgaaatgattgttcaaataacaca |
90 |
Q |
| |
|
||||||||| || || |||||| ||||| ||||||||| ||||||||||||||||||||||| |
|
|
| T |
29706658 |
attttctttgtaaatttatggttatcttaaaagttgtcacagaaatgattgttcaaataacaca |
29706595 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 44 - 91
Target Start/End: Complemental strand, 52283642 - 52283595
Alignment:
| Q |
44 |
atggttgtcttataagttgtcattgaaatgattgttcaaataacacaa |
91 |
Q |
| |
|
|||||||||| ||||||||||||||||||||| || ||||||||||| |
|
|
| T |
52283642 |
atggttgtctcataagttgtcattgaaatgatcttttaaataacacaa |
52283595 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 89
Target Start/End: Original strand, 5486029 - 5486074
Alignment:
| Q |
44 |
atggttgtcttataagttgtcattgaaatgattgttcaaataacac |
89 |
Q |
| |
|
|||||||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
5486029 |
atggttgttttataagttgtcaagtaaatgattgttcaaataacac |
5486074 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 49 - 90
Target Start/End: Complemental strand, 34974770 - 34974729
Alignment:
| Q |
49 |
tgtcttataagttgtcattgaaatgattgttcaaataacaca |
90 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
34974770 |
tgtcttataagttgtcacataaatgattgttcaaataacaca |
34974729 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 88
Target Start/End: Complemental strand, 51436724 - 51436664
Alignment:
| Q |
28 |
ttttctttatacatcaatggttgtcttataagttgtcattgaaatgattgttcaaataaca |
88 |
Q |
| |
|
|||||||| || ||| ||||||||| |||||||||||| |||| ||||||||||||||| |
|
|
| T |
51436724 |
ttttctttgtaaatctatggttgtcatataagttgtcaaccaaattattgttcaaataaca |
51436664 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 46; Significance: 2e-17; HSPs: 10)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 52418330 - 52418395
Alignment:
| Q |
25 |
tcattttctttatacatcaatggttgtcttataagttgtcattgaaatgattgttcaaataacaca |
90 |
Q |
| |
|
||||||||||| || ||||||||||||| ||||| |||||||||||||| |||||||||||||||| |
|
|
| T |
52418330 |
tcattttctttgtaaatcaatggttgtcatataacttgtcattgaaatggttgttcaaataacaca |
52418395 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 91
Target Start/End: Original strand, 30185638 - 30185705
Alignment:
| Q |
24 |
ctcattttctttatacatcaatggttgtcttataagttgtcattgaaatgattgttcaaataacacaa |
91 |
Q |
| |
|
|||||||||||| || |||||| |||||| |||| ||||| |||||||| ||||||||||||||||| |
|
|
| T |
30185638 |
ctcattttctttgtaaatcaataattgtctcataaattgtctttgaaatggttgttcaaataacacaa |
30185705 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 52564630 - 52564543
Alignment:
| Q |
1 |
tgctttggtttttgttccattatctcattttctttatacatcaatggttgtcttataagttgtcattgaaatgattgttcaaataaca |
88 |
Q |
| |
|
|||||||||||| || ||| || || |||||||| || ||| ||||||||| |||||||||||| |||||| |||||||||||||| |
|
|
| T |
52564630 |
tgctttggttttagtgccaatacctacttttctttgtaaatctatggttgtcccataagttgtcatagaaatggttgttcaaataaca |
52564543 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 21 - 91
Target Start/End: Complemental strand, 34627842 - 34627772
Alignment:
| Q |
21 |
tatctcattttctttatacatcaatggttgtcttataagttgtcattgaaatgattgttcaaataacacaa |
91 |
Q |
| |
|
||||| ||||||||| || || |||||||||||||||||| |||| |||| |||||||||||||||||| |
|
|
| T |
34627842 |
tatcttattttctttgtaaatttatggttgtcttataagttatcataaaaataattgttcaaataacacaa |
34627772 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 55361214 - 55361124
Alignment:
| Q |
1 |
tgctttggtttttgttccattatctcattttctttatacatcaatggttgtcttataagttgtcattgaaatgattgttcaaataacacaa |
91 |
Q |
| |
|
||||||||||||||| || || ||||||||||| || ||||||||||||| ||||||| ||||| |||| |||||||||||| |||| |
|
|
| T |
55361214 |
tgctttggtttttgtgtcaatacttcattttctttgtaaatcaatggttgtcacataagttttcattcaaatagttgttcaaataaaacaa |
55361124 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 90
Target Start/End: Complemental strand, 42672795 - 42672727
Alignment:
| Q |
21 |
tatctcattttctttatacatcaatggttgtcttataagttgtcattgaaatgattgttcaaataacaca |
90 |
Q |
| |
|
||||||||||||||| || |||| |||||||| ||||||| | |||| ||||||||||||||||||||| |
|
|
| T |
42672795 |
tatctcattttctttttaaatca-tggttgtcccataagttataattgcaatgattgttcaaataacaca |
42672727 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 35299855 - 35299765
Alignment:
| Q |
1 |
tgctttggtttttgttccattatctcattttctttatacatcaatggttgtcttataagttgtcattgaaatgattgttcaaataacacaa |
91 |
Q |
| |
|
||||||| ||||||| || || ||||||||||||||| || || |||||| || || |||||||| ||||| ||||| ||||||||||| |
|
|
| T |
35299855 |
tgctttgatttttgtgtcaatacctcattttctttataaattcattgttgtcctaaaaattgtcattaaaatgcttgttgaaataacacaa |
35299765 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 91
Target Start/End: Original strand, 46361568 - 46361634
Alignment:
| Q |
25 |
tcattttctttatacatcaatggttgtcttataagttgtcattgaaatgattgttcaaataacacaa |
91 |
Q |
| |
|
||||||||||| | |||||||||||| ||||||||||||| ||||| || |||||||||||||| |
|
|
| T |
46361568 |
tcattttctttgtgaatcaatggttgttcaataagttgtcattaaaatggttattcaaataacacaa |
46361634 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 90
Target Start/End: Original strand, 42997395 - 42997464
Alignment:
| Q |
21 |
tatctcattttctttatacatcaatggttgtcttataagttgtcattgaaatgattgttcaaataacaca |
90 |
Q |
| |
|
||||| |||||||||||||| ||||||||||| |||||||||| |||||| |||| |||||||||| |
|
|
| T |
42997395 |
tatcttattttctttatacaattttggttgtcttaaaagttgtcatataaatgaatgtttaaataacaca |
42997464 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 54007579 - 54007640
Alignment:
| Q |
28 |
ttttctttatacatcaatggttgtcttataagttgtcattgaaatgattgttcaaataacac |
89 |
Q |
| |
|
||||||||||| || ||||||||||||||||||||||| | ||| | ||||||||||||| |
|
|
| T |
54007579 |
ttttctttataaatttatggttgtcttataagttgtcatacagatggtcgttcaaataacac |
54007640 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 26 - 91
Target Start/End: Complemental strand, 17154490 - 17154425
Alignment:
| Q |
26 |
cattttctttatacatcaatggttgtcttataagttgtcattgaaatgattgttcaaataacacaa |
91 |
Q |
| |
|
||||||||||||| ||||||| || || | |||||||||||||||||| ||||||||||||||||| |
|
|
| T |
17154490 |
cattttctttataaatcaatgtttatcctttaagttgtcattgaaatggttgttcaaataacacaa |
17154425 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 55 - 90
Target Start/End: Complemental strand, 35649916 - 35649881
Alignment:
| Q |
55 |
ataagttgtcattgaaatgattgttcaaataacaca |
90 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||| |
|
|
| T |
35649916 |
ataaattgtcattgaaatgattgttcaaataacaca |
35649881 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 36; Significance: 0.00000000002; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 91
Target Start/End: Original strand, 32752517 - 32752584
Alignment:
| Q |
24 |
ctcattttctttatacatcaatggttgtcttataagttgtcattgaaatgattgttcaaataacacaa |
91 |
Q |
| |
|
|||||||||||| || ||||||| ||||| |||| || ||||||||||| ||||||||||||||||| |
|
|
| T |
32752517 |
ctcattttctttgtaaatcaatgattgtcccataaattatcattgaaatggttgttcaaataacacaa |
32752584 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 86
Target Start/End: Original strand, 40517391 - 40517433
Alignment:
| Q |
44 |
atggttgtcttataagttgtcattgaaatgattgttcaaataa |
86 |
Q |
| |
|
|||||||||||||||| |||||| |||||||||||||||||| |
|
|
| T |
40517391 |
atggttgtcttataagatgtcataaaaatgattgttcaaataa |
40517433 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 89
Target Start/End: Original strand, 37597371 - 37597416
Alignment:
| Q |
44 |
atggttgtcttataagttgtcattgaaatgattgttcaaataacac |
89 |
Q |
| |
|
|||||||||||||||||||||| | ||||||||||||||||||| |
|
|
| T |
37597371 |
atggttgtcttataagttgtcaactatatgattgttcaaataacac |
37597416 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0005 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0005
Description:
Target: scaffold0005; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 28 - 90
Target Start/End: Complemental strand, 213804 - 213742
Alignment:
| Q |
28 |
ttttctttatacatcaatggttgtcttataagttgtcattgaaatgattgttcaaataacaca |
90 |
Q |
| |
|
||||||||||| || |||||||||| | || ||||||| ||||||||||||||||||||||| |
|
|
| T |
213804 |
ttttctttataaatttatggttgtctcaaaaattgtcatggaaatgattgttcaaataacaca |
213742 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 35; Significance: 0.00000000008; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 28 - 90
Target Start/End: Original strand, 14603574 - 14603636
Alignment:
| Q |
28 |
ttttctttatacatcaatggttgtcttataagttgtcattgaaatgattgttcaaataacaca |
90 |
Q |
| |
|
||||||||||| || |||||||||| | || ||||||| ||||||||||||||||||||||| |
|
|
| T |
14603574 |
ttttctttataaatttatggttgtctcaaaaattgtcatggaaatgattgttcaaataacaca |
14603636 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 91
Target Start/End: Original strand, 32866416 - 32866450
Alignment:
| Q |
57 |
aagttgtcattgaaatgattgttcaaataacacaa |
91 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||| |
|
|
| T |
32866416 |
aagttgtcattaaaatgattgttcaaataacacaa |
32866450 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 35; Significance: 0.00000000008; HSPs: 6)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 44977480 - 44977390
Alignment:
| Q |
1 |
tgctttggtttttgttccattatctcattttctttatacatcaatggttgtcttataagttgtcattgaaatgattgttcaaataacacaa |
91 |
Q |
| |
|
||||||||||||||| || || | |||||||||| || || |||||||||| ||||||| || || ||||| ||||||||||||||||| |
|
|
| T |
44977480 |
tgctttggtttttgtgtcaataccccattttctttgtaaatttatggttgtctcataagttttcgttcaaatggttgttcaaataacacaa |
44977390 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 88
Target Start/End: Original strand, 43520991 - 43521035
Alignment:
| Q |
44 |
atggttgtcttataagttgtcattgaaatgattgttcaaataaca |
88 |
Q |
| |
|
|||||||||||||| |||||||| |||||||||||||||||||| |
|
|
| T |
43520991 |
atggttgtcttataggttgtcatgtaaatgattgttcaaataaca |
43521035 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 44 - 91
Target Start/End: Complemental strand, 1907701 - 1907654
Alignment:
| Q |
44 |
atggttgtcttataagttgtcattgaaatgattgttcaaataacacaa |
91 |
Q |
| |
|
||||||||| || |||||||||| ||||||||||||||||||||||| |
|
|
| T |
1907701 |
atggttgtcatacaagttgtcatctaaatgattgttcaaataacacaa |
1907654 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 91
Target Start/End: Original strand, 34215409 - 34215443
Alignment:
| Q |
57 |
aagttgtcattgaaatgattgttcaaataacacaa |
91 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||| |
|
|
| T |
34215409 |
aagttatcattgaaatgattgttcaaataacacaa |
34215443 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 48 - 97
Target Start/End: Complemental strand, 30339798 - 30339749
Alignment:
| Q |
48 |
ttgtcttataagttgtcattgaaatgattgttcaaataacacaagtcatt |
97 |
Q |
| |
|
|||||| ||||||| ||||| ||||| ||||||||||||||||| ||||| |
|
|
| T |
30339798 |
ttgtctcataagttctcatttaaatggttgttcaaataacacaactcatt |
30339749 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 91
Target Start/End: Complemental strand, 21313410 - 21313378
Alignment:
| Q |
59 |
gttgtcattgaaatgattgttcaaataacacaa |
91 |
Q |
| |
|
|||||||||||||||||| |||||||||||||| |
|
|
| T |
21313410 |
gttgtcattgaaatgattattcaaataacacaa |
21313378 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 89
Target Start/End: Original strand, 31749498 - 31749543
Alignment:
| Q |
44 |
atggttgtcttataagttgtcattgaaatgattgttcaaataacac |
89 |
Q |
| |
|
|||||||||| |||||||||| | ||||||||||||||||||||| |
|
|
| T |
31749498 |
atggttgtctcttaagttgtcaatcaaatgattgttcaaataacac |
31749543 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0087 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0087
Description:
Target: scaffold0087; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 100
Target Start/End: Complemental strand, 53335 - 53243
Alignment:
| Q |
8 |
gtttttgttccattatctcattttctttatacatcaatggttgtcttataagttgtcattgaaatgattgttcaaataacacaagtcattaaa |
100 |
Q |
| |
|
|||||||| || |||||||||||||||||| || ||||||||| | || || |||| |||| | |||||||||||||||| |||||||| |
|
|
| T |
53335 |
gtttttgtgtcaatatctcattttctttataaatttttggttgtctaaaaacttatcatataaataaatgttcaaataacacaactcattaaa |
53243 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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