View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF17707_low_5 (Length: 310)
Name: NF17707_low_5
Description: NF17707
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17707_low_5 |
 | |
|
Alignment Details
Target: chr4 (Bit Score: 209; Significance: 1e-114; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 300
Target Start/End: Complemental strand, 12888781 - 12888485
Alignment:
| Q |
1 |
tgtttcggttggtgatgttggagtgggggtgttgttagtgtgctgctgtttttggtgaagtttcgaatggaggtgatgcagggagtaatgttgctgtctt |
100 |
Q |
| |
|
|||||||||||||||||||| ||||| | |||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |
|
|
| T |
12888781 |
tgtttcggttggtgatgttgtagtggtgttgttgttaatgtgctgctgtttttggtgaagtttcaaatggaggtgatgcagggagtggtgttgctgtctt |
12888682 |
T |
|
| Q |
101 |
gggggatgtccaagtggtggtgatgcagtttgcatgtggtgatctcagatctaaggtcatggtttattgagttgatggtgattttggtggttgttggtga |
200 |
Q |
| |
|
|| ||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
12888681 |
aggtgatgtccaagtggtggtgatgcagtctgcgtgtggtgatctcaaatctaaggtcatggtttattgagttgatggtaattttggtggttgttggtga |
12888582 |
T |
|
| Q |
201 |
tggatatcacaagtgacggttgttggtgttgagttgggaggcgaagtttactgtctctttcttgtgtggtggtgagctcaagggtgtggcgatgatgatg |
300 |
Q |
| |
|
||| ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| ||||||||||||||||| |
|
|
| T |
12888581 |
tgggtatcacaggtggtggttgttggtgttgagttgggaggcgaagtttactgtctctttcttgtgt-gtggtgagttcaa--gtgtggcgatgatgatg |
12888485 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 158 - 240
Target Start/End: Original strand, 46879468 - 46879551
Alignment:
| Q |
158 |
catggtttattgagttgatggtgattttggtggttgttggtgatggatatcacaag-tgacggttgttggtgttgagttgggag |
240 |
Q |
| |
|
|||| ||||||||||| ||||||||||| ||| ||||| ||||||| |||| |||| || ||||||||||||||||||||||| |
|
|
| T |
46879468 |
catgttttattgagttaatggtgattttagtgattgtttgtgatgggtatctcaagatggtggttgttggtgttgagttgggag |
46879551 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 178; Significance: 5e-96; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 1 - 300
Target Start/End: Complemental strand, 36593435 - 36593140
Alignment:
| Q |
1 |
tgtttcggttggtgatgttggagtgggggtgttgttagtgtgctgctgtttttggtgaagtttcgaatggaggtgatgcagggagtaatgttgctgtctt |
100 |
Q |
| |
|
||||||||||||||||||| |||||| |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||| || |
|
|
| T |
36593435 |
tgtttcggttggtgatgttagagtggtagtgttgttagtgtgctactgttttttgtgaagtttcgaatggaggtgatgcagggagtggtgttgctgtttt |
36593336 |
T |
|
| Q |
101 |
gggggatgtccaagtggtggtgatgcagtttgcatgtggtgatctcagatctaaggtcatggtttattgagttgatggtgattttggtggttgttggtga |
200 |
Q |
| |
|
|| ||||||||||||||||||||| ||| || | |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| |||| |
|
|
| T |
36593335 |
ggatgatgtccaagtggtggtgatgtagtctgtgtttggtgatctcagatctaaggtcatggattattgagttgatggttattttggtggttgtttgtga |
36593236 |
T |
|
| Q |
201 |
tggatatcacaagtgacggttgttggtgttgagttgggaggcgaagtttactgtctctttcttgtgtggtggtgagctcaagggtgtggcgatgatgatg |
300 |
Q |
| |
|
||| |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| || ||||| ||||||||||||| |
|
|
| T |
36593235 |
tgggtatcacaagt---ggtggttggtgttgagttgggaggcgaagtttactgtctctttcttgtg-ggtggggagttcgggggtggggcgatgatgatg |
36593140 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 170; Significance: 3e-91; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 1 - 300
Target Start/End: Complemental strand, 20519535 - 20519239
Alignment:
| Q |
1 |
tgtttcggttggtgatgttggagtgggggtgttgttagtgtgctgctgtttttggtgaagtttcgaatggaggtgatgcagggagtaatgttgctgtctt |
100 |
Q |
| |
|
||||||||||||||||||| |||||| ||||||||||||||| |||||||||||||||||| |||||||||||||| |||||||| ||||||||| || |
|
|
| T |
20519535 |
tgtttcggttggtgatgttagagtggtagtgttgttagtgtgcaactgtttttggtgaagttttgaatggaggtgatgtagggagtagtgttgctgtttt |
20519436 |
T |
|
| Q |
101 |
gggggatgtccaagtggtggtgatgcagtttgcatgtggtgatctcagatctaaggtcatggtttattgagttgatggtgattttggtggttgttggtga |
200 |
Q |
| |
|
|| |||||||||||||||||||| ||| ||| | | ||||||||||||||||| |||||||| |||| |||||||| ||||||||||||||||||||| |
|
|
| T |
20519435 |
aggtgatgtccaagtggtggtgattgagtctgcgttttgtgatctcagatctaagatcatggttgattgtgttgatggagattttggtggttgttggtga |
20519336 |
T |
|
| Q |
201 |
tggatatcacaagtgacggttgttggtgttgagttgggaggcgaagtttactgtctctttcttgtgtggtggtgagctcaagggtgtggcgatgatgatg |
300 |
Q |
| |
|
||| ||||| |||| ||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || |||| |||||||||||||| |
|
|
| T |
20519335 |
tgggtatcataagt---ggtggttggtgttgagttgggaggcgaagtttattgtctctttcttgtgtggtggtgagttcgggggtatggcgatgatgatg |
20519239 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 1 - 300
Target Start/End: Original strand, 38149051 - 38149348
Alignment:
| Q |
1 |
tgtttcggttggtgatgttggagtgggggtgttgttagtgtgctgctgtttttggtgaagtttcgaatggaggtgatgcagggagtaatgttgctgtctt |
100 |
Q |
| |
|
||||||||||||||||||| || ||| ||||| |||||||||| |||||||| ||||||||| |||||||||||||||||||||| || | |||| || |
|
|
| T |
38149051 |
tgtttcggttggtgatgttagaatggtagtgttattagtgtgctactgttttttgtgaagttttgaatggaggtgatgcagggagtggtgcttctgtttt |
38149150 |
T |
|
| Q |
101 |
gggggatgtccaagtggtggtgatgcagtttgcatgtggtgatctcagatctaaggtcatggtttattgagttgatggtgattttggtggttgttggtga |
200 |
Q |
| |
|
|| ||||| ||||||||||||||||| || | ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
38149151 |
ggatgatgtgacagtggtggtgatgcagtctgtgtttggtgatctcagatctaaggtcatggtttattgagttgatggttattttggtggttgttggtga |
38149250 |
T |
|
| Q |
201 |
tggatatcacaagtgacggttgttggtgttgagttgggaggcgaagtttactgtctctttcttgtgtggtggtgagctc-aagggtgtggcgatgatgat |
299 |
Q |
| |
|
|| |||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || |||||||||||||||||| |
|
|
| T |
38149251 |
tgagtatcacaagt---ggtggttggtgttgagttgggaggcgaagtttattgtctctttcttgtgtggtggtgagttcggggggtgtggcgatgatgat |
38149347 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 1 - 300
Target Start/End: Original strand, 32919047 - 32919341
Alignment:
| Q |
1 |
tgtttcggttggtgatgttggagtgggggtgttgttagtgtgctgctgtttttggtgaagtttcgaatggaggtgatgcagggagtaatgttgctgtctt |
100 |
Q |
| |
|
||||||||||||||||||| |||||| |||||||||||||||| |||||||| |||||||||||||||||||||||||| ||||| || |||||| || |
|
|
| T |
32919047 |
tgtttcggttggtgatgttagagtggcagtgttgttagtgtgctactgttttttgtgaagtttcgaatggaggtgatgcaaggagt-gtgctgctgtttt |
32919145 |
T |
|
| Q |
101 |
gggggatgtccaagtggtggtgatgcagtttgcatgtggtgatctcagatctaaggtcatggtttattgagttgatggtgattttggtggttgttggtga |
200 |
Q |
| |
|
|| ||||| ||||||||||||||||||| || | ||||||||||| |||||||||||| ||||||||||||||||| | |||||||||||||||||| |
|
|
| T |
32919146 |
ggatgatgttcaagtggtggtgatgcagtctgtgtttggtgatctcatatctaaggtcataatttattgagttgatggtta-tttggtggttgttggtga |
32919244 |
T |
|
| Q |
201 |
tggatatcacaagtgacggttgttggtgttgagttgggaggcgaagtttactgtctctttcttgtgtggtggtgagctcaagggtgtggcgatgatgatg |
300 |
Q |
| |
|
||| |||||||||| ||| ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| || ||||||||| ||||||||| |
|
|
| T |
32919245 |
tgggtatcacaagt---ggtggttggtgttgagttgggaggcgaagttcactatctctttcttgtgtggtggtgagttcgtgggtgtggcaatgatgatg |
32919341 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 165; Significance: 3e-88; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 1 - 300
Target Start/End: Complemental strand, 49359092 - 49358794
Alignment:
| Q |
1 |
tgtttcggttggtgatgttggagtgggggtgttgttagtgtgctgctgtttttggtgaagtttcgaatggaggtgatgcagggagtaatgttgctgtctt |
100 |
Q |
| |
|
|||||| |||||||||||||||||| ||||||||||||||| || ||||||||||||||||||||||| |||||||| ||||| | | || ||||||| |
|
|
| T |
49359092 |
tgtttctgttggtgatgttggagtgttggtgttgttagtgtgatgttgtttttggtgaagtttcgaatgaaggtgatgtagggaatggtcttcctgtctt |
49358993 |
T |
|
| Q |
101 |
gggggatgtccaagtggtggtgatgcagtttgcatgtggtgatctcagatctaaggtcatggtttattgagttgatggtgattttggtggttgttggtga |
200 |
Q |
| |
|
||| ||||||||||||||| ||||||||||| ||||||||| ||||||||||||| |||||||||| |||| |||||||||||||||||||||||||| |
|
|
| T |
49358992 |
gggtgatgtccaagtggtg---atgcagtttgcgtgtggtgatatcagatctaaggttatggtttattaagttcatggtgattttggtggttgttggtga |
49358896 |
T |
|
| Q |
201 |
tggatatcacaagtgacggttgttggtgttgagttgggaggcgaa--gtttactgtctctttcttgtgtggtggtgagctcaagggtgtggcgatgatga |
298 |
Q |
| |
|
||| ||||||||||| |||| ||||||||||| ||| ||||||| ||| |||||||||||||||||||| |||||| ||| ||||||||||||||||| |
|
|
| T |
49358895 |
tgggtatcacaagtggtggtttttggtgttgaggtggaaggcgaaatgttcactgtctctttcttgtgtggcggtgagttcaggggtgtggcgatgatga |
49358796 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 152; Significance: 2e-80; HSPs: 3)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 2 - 296
Target Start/End: Complemental strand, 22697077 - 22696786
Alignment:
| Q |
2 |
gtttcggttggtgatgttggagtgggggtgttgtt-agtgtgctgctgtttttggtgaagtttcgaatggaggtgatgcagggagtaatgttgctgtctt |
100 |
Q |
| |
|
||||||| ||||||||||| ||||| ||||||||| |||| ||| |||||||||||||||||| |||||||||||||| |||||| | |||||||||||| |
|
|
| T |
22697077 |
gtttcggctggtgatgttgaagtggtggtgttgtttagtgagctactgtttttggtgaagttttgaatggaggtgatgtagggagcagtgttgctgtctt |
22696978 |
T |
|
| Q |
101 |
gggggatgtccaagtggtggtgatgcagtttgcatgtggtgatctcagatctaaggtcatggtttattgagttgatggtgattttggtggttgttggtga |
200 |
Q |
| |
|
||| ||||||||||||| ||||||||||| | | |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| |
|
|
| T |
22696977 |
gggtgatgtccaagtggcggtgatgcagtctacgtgtggtgatctcagatctaaggtcatggattattgagttgatggtga------tggttgttggtga |
22696884 |
T |
|
| Q |
201 |
tggatatcacaagtgacggttgttggtgttgagttgggaggcgaa--gtttactgtctctttcttgtgtggtggtgagctcaagggtgtggcgatgat |
296 |
Q |
| |
|
| | ||||||||||| ||||||||||||| || ||||||||||| ||| ||||||||||||||||||||||||||| | ||||||||||||||| |
|
|
| T |
22696883 |
tcggtatcacaagtggtggttgttggtgtttagctgggaggcgaaatgttcactgtctctttcttgtgtggtggtgagtttgggggtgtggcgatgat |
22696786 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 34501226 - 34501420
Alignment:
| Q |
1 |
tgtttcggttggtgatgttggagtgggggtgttgttagtgtgctgctgtttttggtgaagtttcgaatggaggtgatgcagggagtaatgttgctgtctt |
100 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||||||||||||| |||||| |||||||||||| |
|
|
| T |
34501226 |
tgtttcggttggtgatgttggagtggtggtgttgttagtgtgctactatttttggtgaagtttcgaatggaggtgatgttgggagtggtgttgctgtctt |
34501325 |
T |
|
| Q |
101 |
gggggatgtccaagtggtggtgatgcagtttgcatgtggtgatctcagatctaaggtcatggtttattgagttgatggtgattttggtggttgttggtga |
200 |
Q |
| |
|
||| |||||||||||||| |||||||||| ||| |||||| ||| |||||||||||| ||||||||||||||||||||| |||||||||||||| |
|
|
| T |
34501326 |
gggtgatgtccaagtggtagtgatgcagtctgcgtgtggt-------gatataaggtcatggtatattgagttgatggtgattttagtggttgttggtga |
34501418 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 205 - 300
Target Start/End: Original strand, 34502715 - 34502810
Alignment:
| Q |
205 |
tatcacaagtgacggttgttggtgttgagttgggaggcgaagtttactgtctctttcttgtgtggtggtgagctcaagggtgtggcgatgatgatg |
300 |
Q |
| |
|
||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| | ||||||||| |||||||||| |
|
|
| T |
34502715 |
tatcacaagtggtggttgttgctgttgagttgggaggcgaagtttactgtctctttcttctgtggtggtgagtttgagggtgtggagatgatgatg |
34502810 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 137; Significance: 1e-71; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 2 - 299
Target Start/End: Complemental strand, 36934776 - 36934480
Alignment:
| Q |
2 |
gtttcggttggtgatgttggagtgggggtgttgttagtgtgctgctgttttt-ggtgaagtttcgaatggaggtgatgcagggagtaatgttgctgtctt |
100 |
Q |
| |
|
||||||||||||||||| ||||||| ||||||||||||| |||| ||||||| |||||||||||||| |||||||||||||||||| || |||| |||| |
|
|
| T |
36934776 |
gtttcggttggtgatgtcggagtggtggtgttgttagtgcgctgttgttttttggtgaagtttcgaagggaggtgatgcagggagtggtgctgctatctt |
36934677 |
T |
|
| Q |
101 |
gggggatgtccaagtggtggtgatgcagtttgcatgtggtgatc-tcagatctaaggtcatggtttattgagttgatggtgattttggtggttgttggtg |
199 |
Q |
| |
|
||| |||||||||||||||||||||||| || |||||||||| ||||||| |||||||||||||||| ||||||||| ||||||||||||||||||| |
|
|
| T |
36934676 |
gggtgatgtccaagtggtggtgatgcagcctgagtgtggtgatcttcagatcgaaggtcatggtttatt--gttgatggtaattttggtggttgttggtg |
36934579 |
T |
|
| Q |
200 |
atggatatcacaagtgacggttgttggtgttgagttgggaggcgaa--gtttactgtctctttcttgtgtggtggtgagctcaagggtgtggcgatgatg |
297 |
Q |
| |
|
|||| ||||||||||| ||| ||||||||||||||||||||||| || |||||||| |||| |||||||||||| || ||||||||||||||| |
|
|
| T |
36934578 |
atgggtatcacaagtggtggtgtttggtgttgagttgggaggcgaaatattcactgtctc-ttct--tgtggtggtgagttcggaggtgtggcgatgatg |
36934482 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 2 - 164
Target Start/End: Original strand, 5888769 - 5888932
Alignment:
| Q |
2 |
gtttcggttggtgatgttggagtgggggtgttgttagtgtgctgctgtttttggtgaagtttcgaatggaggtgatgcagggagtaatgttgctgtcttg |
101 |
Q |
| |
|
||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| ||||||| ||||| |
|
|
| T |
5888769 |
gtttcggttggtgatgtcggagtgttggtgttgttagtgtgctgctgtttttggtgaagtttcgaatggaggtgctgcatagagtggtgttgctatcttg |
5888868 |
T |
|
| Q |
102 |
ggggatgtccaagtggtggtgatgcagtttgcatgtggtgatc-tcagatctaaggtcatggtt |
164 |
Q |
| |
|
|| ||||||||||||||||||||| ||| |||||||||||||| ||| |||||||||| ||||| |
|
|
| T |
5888869 |
ggtgatgtccaagtggtggtgatgtagtctgcatgtggtgatcttcatatctaaggtcgtggtt |
5888932 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 160 - 276
Target Start/End: Original strand, 5892651 - 5892769
Alignment:
| Q |
160 |
tggtttattgagttgatggtgattttggtggttgttggtgatggatatcacaagtgacggttgttggtgttgagttgggaggcgaa--gtttactgtctc |
257 |
Q |
| |
|
|||| ||||||||||||||||||||||||| | ||| ||||||| ||||||||||| ||| |||||||| |||||||||||||| ||| |||||||| |
|
|
| T |
5892651 |
tggtgtattgagttgatggtgattttggtgttcgttagtgatgggtatcacaagtggtggtgtttggtgttaagttgggaggcgaaatgttcactgtctc |
5892750 |
T |
|
| Q |
258 |
tttcttgtgtggtggtgag |
276 |
Q |
| |
|
||||||||||||| ||||| |
|
|
| T |
5892751 |
tttcttgtgtggttgtgag |
5892769 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 122; Significance: 1e-62; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 6 - 199
Target Start/End: Original strand, 27631784 - 27631977
Alignment:
| Q |
6 |
cggttggtgatgttggagtgggggtgttgttagtgtgctgctgtttttggtgaagtttcgaatggaggtgatgcagggagtaatgttgctgtcttggggg |
105 |
Q |
| |
|
||||||||||||||||||| | |||||||||||||||||||| |||||||||| |||| ||||||||||| |||||||||| || ||| ||||||| | |
|
|
| T |
27631784 |
cggttggtgatgttggagtagtggtgttgttagtgtgctgctatttttggtgatgttttgaatggaggtggtgcagggagtggtgatgccatcttgggtg |
27631883 |
T |
|
| Q |
106 |
atgtccaagtggtggtgatgcagtttgcatgtggtgatctcagatctaaggtcatggtttattgagttgatggtgattttggtggttgttggtg |
199 |
Q |
| |
|
||||||| ||||||||||| ||| ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27631884 |
atgtccacatggtggtgatgtagtctgcatgtggtgatctcagatctaaggtaatgatttattgagttgatggtgattttggtggttgttggtg |
27631977 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 179 - 300
Target Start/End: Original strand, 36607593 - 36607717
Alignment:
| Q |
179 |
tgattttggtggttgttggtgatggatatcacaagtgacggt-tgttggtgttgagttgggaggcgaa--gtttactgtctctttcttgtgtggtggtga |
275 |
Q |
| |
|
||||||||||||||||| ||||||| |||||| |||| ||| | ||||||||||||||||||||||| ||| | ||||||||||| ||||| | |||| |
|
|
| T |
36607593 |
tgattttggtggttgttagtgatgggtatcacgagtggtggtgttttggtgttgagttgggaggcgaaatgttcaatgtctctttctcgtgtgatagtga |
36607692 |
T |
|
| Q |
276 |
gctcaagggtgtggcgatgatgatg |
300 |
Q |
| |
|
| || |||||||| |||||||||| |
|
|
| T |
36607693 |
gttcgggggtgtggtgatgatgatg |
36607717 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 267
Target Start/End: Original strand, 27631967 - 27632018
Alignment:
| Q |
218 |
ggttgttggtgttgagttgggaggcgaa--gtttactgtctctttcttgtgt |
267 |
Q |
| |
|
|||||||||||||||||||||||||||| ||| | |||||||||||||||| |
|
|
| T |
27631967 |
ggttgttggtgttgagttgggaggcgaaatgttcattgtctctttcttgtgt |
27632018 |
T |
|
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Target: chr1 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 156 - 299
Target Start/End: Original strand, 32946613 - 32946756
Alignment:
| Q |
156 |
gtcatggtttattgagttgatggtgattttggtggttgttggtgatggatatcacaagtgacggttgttggtgttgagttgggaggcgaagtttactgtc |
255 |
Q |
| |
|
|||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||| |||||||| |||||| |||||||||||| | | | |
|
|
| T |
32946613 |
gtcatggtttattgagttaatggtaattttggtggttgttggtgatatgtatcacaagtggtggttgttgatgttgatttgggaggcgaaatgttcaccg |
32946712 |
T |
|
| Q |
256 |
tctttcttgtgtggtggtgagctcaagggtgtggcgatgatgat |
299 |
Q |
| |
|
||||||||||||||||||||| || |||||||| || |||||| |
|
|
| T |
32946713 |
tctttcttgtgtggtggtgagttcgtgggtgtggtgacgatgat |
32946756 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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