View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17709_low_14 (Length: 282)
Name: NF17709_low_14
Description: NF17709
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17709_low_14 |
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Alignment Details
Target: chr7 (Bit Score: 169; Significance: 1e-90; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 18 - 238
Target Start/End: Original strand, 2470465 - 2470686
Alignment:
| Q |
18 |
atgataatacttatattacatctaaagttatgattaatgaaatgaattaattgttttt-ctgttnnnnnnngaggggtgggaagagttatcaattaaaga |
116 |
Q |
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| T |
2470465 |
atgataatacttatattatatctaaagttatgattaatgaaatgaattaattgttttttctgttaaaaaaagaggggtgggaagagttatcaattaaaga |
2470564 |
T |
|
| Q |
117 |
tacatcattttacatcttttttcgaagatattttgaattatgtcacttgaatttacaaaatcaaagtcttaccaataagttgactaatcaaactcaagta |
216 |
Q |
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| T |
2470565 |
tacatcattttacatcttttttcgaagatattttgaattatgtcacttgaatttacaaaattaaagtcttaccaataagttgactaatcaagctcaagta |
2470664 |
T |
|
| Q |
217 |
cacccagctacaacaaaactca |
238 |
Q |
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|||||| || ||||||||||| |
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| T |
2470665 |
cacccacttataacaaaactca |
2470686 |
T |
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