View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17709_low_6 (Length: 385)
Name: NF17709_low_6
Description: NF17709
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17709_low_6 |
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Alignment Details
Target: chr7 (Bit Score: 290; Significance: 1e-163; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 290; E-Value: 1e-163
Query Start/End: Original strand, 53 - 370
Target Start/End: Original strand, 7324804 - 7325121
Alignment:
| Q |
53 |
tgcataacccgaaagacatccttcgatatgcgaacacttcaaaagggtctgtaaaagttgtcttttcttgatctactagatcaacggcgatttgattcta |
152 |
Q |
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| T |
7324804 |
tgcataacccgaatgacatccttcgatatgcgaacacttcaaaagggtttgtaaaagttgtcttttcttgatcaactagatcaatgacgatttgattcta |
7324903 |
T |
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| Q |
153 |
tcctgggtatatatccatctaagccctttttggctagtctcttaagcatcttatccatgaatggtaatggaaagtggtcttccttattgcaaagttttac |
252 |
Q |
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| T |
7324904 |
tcctgagtatatatccatctaagccctttttggctagtctcttcagcatcttatccatgaatggtaatggaaagtggtcttccttattgcaaagttttac |
7325003 |
T |
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| Q |
253 |
ctttggttatgcacatcctccatcctattactttacatgttgggatcaactcattcttgtcattcttgattacagtcatacgacataactcatttacttg |
352 |
Q |
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| T |
7325004 |
ctttggttatgcacatcctccatcctattactttacatgttgggatcaactcattcttgtcattcttgattacagtcatacgacataactcatttacttg |
7325103 |
T |
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| Q |
353 |
atagctagagttcccact |
370 |
Q |
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|||||||||||||||||| |
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| T |
7325104 |
atagctagagttcccact |
7325121 |
T |
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