View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17712_high_27 (Length: 229)
Name: NF17712_high_27
Description: NF17712
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17712_high_27 |
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Alignment Details
Target: chr5 (Bit Score: 142; Significance: 1e-74; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 26 - 207
Target Start/End: Complemental strand, 14643010 - 14642829
Alignment:
| Q |
26 |
gagatagcatgaaaataaatcctgaccggtgattggatgaagatcattgaacctatacatatactaaatattttatggccccaatattttgaagacacaa |
125 |
Q |
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| T |
14643010 |
gagatagcatgaaaataaatcctcactcatgattggatgaagatgattgaacctatacatatactaaatattttaaggccgcaatattttgaagacacaa |
14642911 |
T |
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| Q |
126 |
ttccatagagctctttgcatcctccgaaggacaaccctgacctcaatcaatcataactaacttttctaaacataagcaaagt |
207 |
Q |
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|| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
14642910 |
ctctatagagctctttgcatcctcctaaggacaaccctgacctcaatcaatcataactaacttttctaaacataagcaaagt |
14642829 |
T |
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