View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17712_high_32 (Length: 215)
Name: NF17712_high_32
Description: NF17712
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17712_high_32 |
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Alignment Details
Target: chr5 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 14856503 - 14856291
Alignment:
| Q |
1 |
caaattgcaattgatactatgggaaaaggttagtttattcatagattttacttgtttgcatgtgtggttatgctttgtttgaattatgtcggcttcgatt |
100 |
Q |
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| T |
14856503 |
caaattgcaattgatactatgggaaaaggttagtttattcatagattttacttgtttgcatgtgtggttatgctttgtttgaattatgtcggcttcgatt |
14856404 |
T |
|
| Q |
101 |
gtgaccaatatttcatcctcataaaatgttaaattagtaatttttaatatcatgatgattttcttcttcttttgttagcaaaatattccaccatatatta |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
14856403 |
gtgaccaatatttcatcctcataaaatgttaaattagtaatttttaatatcatgatgattttcttcttcttttgttagcaaaatattccaccatatatta |
14856304 |
T |
|
| Q |
201 |
tacacacatatat |
213 |
Q |
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||||||||||||| |
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| T |
14856303 |
tacacacatatat |
14856291 |
T |
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