View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17712_low_26 (Length: 247)
Name: NF17712_low_26
Description: NF17712
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17712_low_26 |
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Alignment Details
Target: chr6 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 1217186 - 1216952
Alignment:
| Q |
1 |
cgtcacgagatccaggatgcaacttaacggcatcttcttcaggtgagtttttgagctttaaaacacatgagaatttctctagtgatatacacataagcag |
100 |
Q |
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| T |
1217186 |
cgtcacgagatccaggatgcaacttaacggcatcttcttcaggtgagtttttgagctttaaaacacatgagaatttctctagtgatatacacataagcag |
1217087 |
T |
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| Q |
101 |
aaaataagataaatggaaaatttgaagttcaaatcttgcatgacttgagatcacatggaattccttttaattataatgcagactgcattttcacatacct |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1217086 |
aaaataagataaatggaaaatttgaagttcaaatcttgcacgacttgagatcacatggaattccttttaattataatgcagactgcattttcacatacct |
1216987 |
T |
|
| Q |
201 |
tgcaaaacttcagatcgcaaggattttgttttaat |
235 |
Q |
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||||||||||||||| ||||||||||||||||||| |
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| T |
1216986 |
tgcaaaacttcagattgcaaggattttgttttaat |
1216952 |
T |
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