View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17712_low_32 (Length: 229)
Name: NF17712_low_32
Description: NF17712
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17712_low_32 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 10502872 - 10503100
Alignment:
| Q |
1 |
gagtgaatggtttctgcaccaatgcctgagacagtttcatggttaggatttcagagagtcaaaggttgttggtttggaaaatgtagaagaatttttgtgt |
100 |
Q |
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| T |
10502872 |
gagtgaatggtttctgcaccaatgcctgagacagtttcatggttaggatttcagagagtcaaaggttgttggtttggaaaatgtagaagaatttttgtgt |
10502971 |
T |
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| Q |
101 |
gtgtgcatgtatgtgtctgaaaagtatcaatgtcaaacacaaggatggaaatttgagatgaatttgcttctctgtctggttttggtgccactagttgttt |
200 |
Q |
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| T |
10502972 |
gtgtgcatgtatgtgtctgaaaagtatcaatgtcaaacacaaggatggaaatttgagatgaatttgcttctttgtctggttttggtgccactagttgttt |
10503071 |
T |
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| Q |
201 |
ggagagaattgtgtgagtcattgtctttc |
229 |
Q |
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||||||||||||||||||||||||||||| |
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| T |
10503072 |
ggagagaattgtgtgagtcattgtctttc |
10503100 |
T |
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