View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17716_high_70 (Length: 267)
Name: NF17716_high_70
Description: NF17716
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17716_high_70 |
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Alignment Details
Target: chr8 (Bit Score: 62; Significance: 7e-27; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 7 - 72
Target Start/End: Complemental strand, 32955567 - 32955502
Alignment:
| Q |
7 |
cttgcttaagaatatggaaagagaattggataattctatttctatacatgttcttaacttcaatta |
72 |
Q |
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| T |
32955567 |
cttgcttaagaatatggaaagagaattggataattctatttctatatatgttcttaacttcaatta |
32955502 |
T |
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Target: chr8; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 206 - 263
Target Start/End: Complemental strand, 32955364 - 32955307
Alignment:
| Q |
206 |
tattgatagtactattttagattggctatgaccatatatgaaatatccctttgctact |
263 |
Q |
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| T |
32955364 |
tattgatagtactcttttagattggctatgaccatatgtgaaatatccctttgatact |
32955307 |
T |
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