View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17716_low_107 (Length: 213)
Name: NF17716_low_107
Description: NF17716
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17716_low_107 |
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Alignment Details
Target: chr7 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 33504868 - 33505067
Alignment:
| Q |
1 |
gaaccattattgatctcttcctctatgttacggcacatttgagttagagccttcccactaccaaattcaactaaatttttgcaatagtttcctgcatctg |
100 |
Q |
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| T |
33504868 |
gaaccattattgatctcttcctctatgttacggcacatttgagttagagccttcccactaccaaattcaactaaatttttgcaatagtttcctgcatctg |
33504967 |
T |
|
| Q |
101 |
gagtccatccttgttcaaaatcttccaccaatttctctaccgagattttcagtttcctaataatttagtaaccaaaatattaattaatatttgcatatat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33504968 |
gagtccatccttgttcaaaatcttccaccaatttctctaccgagatttccagtttcctaataatttagtaaccaaaatattaattaatatttgcatatat |
33505067 |
T |
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