View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17716_low_110 (Length: 202)

Name: NF17716_low_110
Description: NF17716
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17716_low_110
NF17716_low_110
[»] chr6 (12 HSPs)
chr6 (12-169)||(33306912-33307069)
chr6 (24-156)||(33642126-33642258)
chr6 (24-161)||(33403045-33403182)
chr6 (11-168)||(33412345-33412502)
chr6 (12-156)||(33265321-33265465)
chr6 (12-156)||(33274465-33274609)
chr6 (12-168)||(33288002-33288158)
chr6 (12-154)||(31566621-31566763)
chr6 (34-164)||(33390504-33390634)
chr6 (11-164)||(33059986-33060139)
chr6 (23-164)||(33360929-33361070)
chr6 (12-154)||(9169299-9169441)
[»] chr2 (1 HSPs)
chr2 (12-156)||(17438186-17438330)
[»] scaffold1749 (1 HSPs)
scaffold1749 (12-156)||(585-729)
[»] scaffold0428 (1 HSPs)
scaffold0428 (12-156)||(9346-9490)
[»] chr4 (8 HSPs)
chr4 (24-149)||(31496465-31496590)
chr4 (12-149)||(31501623-31501760)
chr4 (32-154)||(31162093-31162213)
chr4 (31-150)||(31020316-31020435)
chr4 (31-150)||(31489117-31489236)
chr4 (31-150)||(31030197-31030316)
chr4 (32-154)||(31150816-31150938)
chr4 (21-154)||(31476522-31476655)


Alignment Details
Target: chr6 (Bit Score: 150; Significance: 2e-79; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 12 - 169
Target Start/End: Complemental strand, 33307069 - 33306912
Alignment:
Q  12 aagcatagggggatttattgtgaagcctttgtcaaacatgaacaaagattccaacaagactttgagatggtgtcaagatggagggaagctctaaaacatg 111  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33307069 aagcaaagtgggatttattgtgaagcctttgtcaaacatgaacaaagattccaacaagactttgagatggtgtcaagatggagggaagctctaaaacatg 33306970  T
Q  112 tggggagtatctctggttgggatctacgtgataagtaagtaatttgtagttttctttc 169  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33306969 tggggagtatctctggttgggatctacgtgataagtaagtaatttgtagttttctttc 33306912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 24 - 156
Target Start/End: Original strand, 33642126 - 33642258
Alignment:
Q  24 atttattgtgaagcctttgtcaaacatgaacaaagattccaacaagactttgagatggtgtcaagatggagggaagctctaaaacatgtggggagtatct 123  Q
    |||||||| ||||| |||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| |||||||||||||    
T  33642126 atttattgggaagcttttgtcaaacatgaacaaagattccaacaagactttcaaatggtgtcaagatggagggaagctctaaaacaagtggggagtatct 33642225  T
Q  124 ctggttgggatctacgtgataagtaagtaattt 156  Q
    |||||||||||||||||||||||||||||||||    
T  33642226 ctggttgggatctacgtgataagtaagtaattt 33642258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 24 - 161
Target Start/End: Complemental strand, 33403182 - 33403045
Alignment:
Q  24 atttattgtgaagcctttgtcaaacatgaacaaagattccaacaagactttgagatggtgtcaagatggagggaagctctaaaacatgtggggagtatct 123  Q
    ||||||||||||||||||||||| |||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| |    
T  33403182 atttattgtgaagcctttgtcaagcatgaaaaaagattccaacaaggctttgagatggtgtcaagatggagggaagctctaaaacaagtggggagtatat 33403083  T
Q  124 ctggttgggatctacgtgataagtaagtaatttgtagt 161  Q
    |||||||||||||| |||||||||||||||||| ||||    
T  33403082 ctggttgggatctatgtgataagtaagtaatttatagt 33403045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 11 - 168
Target Start/End: Complemental strand, 33412502 - 33412345
Alignment:
Q  11 gaagcatagggggatttattgtgaagcctttgtcaaacatgaacaaagattccaacaagactttgagatggtgtcaagatggagggaagctctaaaacat 110  Q
    |||||| || ||||||||||||||| | |||||||||||||||||||||||||||||||||  | | | |||||||||||||||||||||| |||| ||     
T  33412502 gaagcaaagtgggatttattgtgaatcttttgtcaaacatgaacaaagattccaacaagaccctcataaggtgtcaagatggagggaagctttaaaccaa 33412403  T
Q  111 gtggggagtatctctggttgggatctacgtgataagtaagtaatttgtagttttcttt 168  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| | |||||||||    
T  33412402 gtggggagtatctctggttgggatctacgtgataagtaagttatttatggttttcttt 33412345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 12 - 156
Target Start/End: Complemental strand, 33265465 - 33265321
Alignment:
Q  12 aagcatagggggatttattgtgaagcctttgtcaaacatgaacaaagattccaacaagactttgagatggtgtcaagatggagggaagctctaaaacatg 111  Q
    ||||| || ||||||||| ||||||||||| ||||||||||||||||||||||||||||   | ||| |||||||| ||||||||| ||||||||||| |    
T  33265465 aagcaaagtgggatttatggtgaagcctttatcaaacatgaacaaagattccaacaagaacatcagaaggtgtcaaaatggagggacgctctaaaacaag 33265366  T
Q  112 tggggagtatctctggttgggatctacgtgataagtaagtaattt 156  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  33265365 tggggagtatctctggttgggatctacgtgataagtaagtaattt 33265321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 12 - 156
Target Start/End: Complemental strand, 33274609 - 33274465
Alignment:
Q  12 aagcatagggggatttattgtgaagcctttgtcaaacatgaacaaagattccaacaagactttgagatggtgtcaagatggagggaagctctaaaacatg 111  Q
    ||||| || ||||||||| ||||||||||| ||||||||||||||||||||||||||||   | ||| |||||||| ||||||||| ||||||||||| |    
T  33274609 aagcaaagtgggatttatggtgaagcctttatcaaacatgaacaaagattccaacaagaacatcagaaggtgtcaaaatggagggacgctctaaaacaag 33274510  T
Q  112 tggggagtatctctggttgggatctacgtgataagtaagtaattt 156  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  33274509 tggggagtatctctggttgggatctacgtgataagtaagtaattt 33274465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 12 - 168
Target Start/End: Complemental strand, 33288158 - 33288002
Alignment:
Q  12 aagcatagggggatttattgtgaagcctttgtcaaacatgaacaaagattccaacaagactttgagatggtgtcaagatggagggaagctctaaaacatg 111  Q
    ||||| || ||||||||| |||||||||||  || ||||||||||| |||||||||||||| | ||||||||||||||||||||||||| |||||||| |    
T  33288158 aagcaaagtgggatttatggtgaagcctttaccatacatgaacaaacattccaacaagactctcagatggtgtcaagatggagggaagccctaaaacaag 33288059  T
Q  112 tggggagtatctctggttgggatctacgtgataagtaagtaatttgtagttttcttt 168  Q
    ||||||||||| |||||||||||||| |||||||||||||||||| |||||| ||||    
T  33288058 tggggagtatcgctggttgggatctatgtgataagtaagtaatttatagtttacttt 33288002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 12 - 154
Target Start/End: Original strand, 31566621 - 31566763
Alignment:
Q  12 aagcatagggggatttattgtgaagcctttgtcaaacatgaacaaagattccaacaagactttgagatggtgtcaagatggagggaagctctaaaacatg 111  Q
    ||||| || |||||||||| |||||| |||| |||||||||||||||||||| |||||||| | ||||||||||||||||||| |||||||||||||| |    
T  31566621 aagcaaagtgggatttattctgaagcttttgccaaacatgaacaaagattccgacaagactctcagatggtgtcaagatggagagaagctctaaaacaag 31566720  T
Q  112 tggggagtatctctggttgggatctacgtgataagtaagtaat 154  Q
    ||| |||||||| ||||||||||||||||||||||||||||||    
T  31566721 tggcgagtatctttggttgggatctacgtgataagtaagtaat 31566763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 34 - 164
Target Start/End: Complemental strand, 33390634 - 33390504
Alignment:
Q  34 aagcctttgtcaaacatgaacaaagattccaacaagactttgagatggtgtcaagatggagggaagctctaaaacatgtggggagtatctctggttggga 133  Q
    |||| |||||||||||||||||||||||||||||| ||| | ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  33390634 aagcttttgtcaaacatgaacaaagattccaacaaaactctcagatggtgtcaagatggagagaagctctaaaacaagtggggagtatctctggttggga 33390535  T
Q  134 tctacgtgataagtaagtaatttgtagtttt 164  Q
    |||| |||||||||||| ||||| |||||||    
T  33390534 tctatgtgataagtaagaaatttatagtttt 33390504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 11 - 164
Target Start/End: Complemental strand, 33060139 - 33059986
Alignment:
Q  11 gaagcatagggggatttattgtgaagcctttgtcaaacatgaacaaagattccaacaagactttgagatggtgtcaagatggagggaagctctaaaacat 110  Q
    |||||| || || |||||| ||||||| |||||||||||||||||||||||||||||||||| |  || ||||||||||||||| ||||||||| | ||     
T  33060139 gaagcaaagtggaatttatagtgaagcttttgtcaaacatgaacaaagattccaacaagactctatgaaggtgtcaagatggagagaagctctagagcaa 33060040  T
Q  111 gtggggagtatctctggttgggatctacgtgataagtaagtaatttgtagtttt 164  Q
    ||||||||||| ||||||||||||||||||||| |||||||||||| |||||||    
T  33060039 gtggggagtatatctggttgggatctacgtgatgagtaagtaatttatagtttt 33059986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 23 - 164
Target Start/End: Complemental strand, 33361070 - 33360929
Alignment:
Q  23 gatttattgtgaagcctttgtcaaacatgaacaaagattccaacaagactttgagatggtgtcaagatggagggaagctctaaaacatgtggggagtatc 122  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||| | ||| |||||||| |||||||||||||||| | || ||||||  ||||    
T  33361070 gatttatagtgaagcttttgtcaaacatgaacaaagattccaacaagactctaagaaggtgtcaatatggagggaagctctagagcaagtgggggatatc 33360971  T
Q  123 tctggttgggatctacgtgataagtaagtaatttgtagtttt 164  Q
    |||||||||||||||| |||||||||||||| || |||||||    
T  33360970 tctggttgggatctacatgataagtaagtaacttatagtttt 33360929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 12 - 154
Target Start/End: Complemental strand, 9169441 - 9169299
Alignment:
Q  12 aagcatagggggatttattgtgaagcctttgtcaaacatgaacaaagattccaacaagactttgagatggtgtcaagatggagggaagctctaaaacatg 111  Q
    ||||| || ||||||||||||||||| |||| ||||||||||||||||||| || |||| | | | ||||||||| |||||||| ||| | ||||||| |    
T  9169441 aagcaaagtgggatttattgtgaagcatttgccaaacatgaacaaagattcaaataagattctcacatggtgtcaggatggaggaaaggtttaaaacaag 9169342  T
Q  112 tggggagtatctctggttgggatctacgtgataagtaagtaat 154  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  9169341 tggggagtatctctggttgggacctacgtgataagtaagtaat 9169299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 101; Significance: 3e-50; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 12 - 156
Target Start/End: Original strand, 17438186 - 17438330
Alignment:
Q  12 aagcatagggggatttattgtgaagcctttgtcaaacatgaacaaagattccaacaagactttgagatggtgtcaagatggagggaagctctaaaacatg 111  Q
    ||||| || |||||||||  |||||| ||||||||||||||||||||||||||||||||| || ||| ||||||||||||||||||||||||||| || |    
T  17438186 aagcaaagtgggatttatcatgaagcttttgtcaaacatgaacaaagattccaacaagaccttcagaaggtgtcaagatggagggaagctctaaagcaag 17438285  T
Q  112 tggggagtatctctggttgggatctacgtgataagtaagtaattt 156  Q
    ||||||||||| |||||||||||||||||||||||||||||||||    
T  17438286 tggggagtatcgctggttgggatctacgtgataagtaagtaattt 17438330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1749 (Bit Score: 81; Significance: 2e-38; HSPs: 1)
Name: scaffold1749
Description:

Target: scaffold1749; HSP #1
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 12 - 156
Target Start/End: Complemental strand, 729 - 585
Alignment:
Q  12 aagcatagggggatttattgtgaagcctttgtcaaacatgaacaaagattccaacaagactttgagatggtgtcaagatggagggaagctctaaaacatg 111  Q
    ||||| || ||||||||||| || |  |||| ||||||||||||||||||| ||||||||  | | | ||||||||||||||||||||||||||| || |    
T  729 aagcaaagtgggatttattgggacgattttgccaaacatgaacaaagattcaaacaagaccctcataaggtgtcaagatggagggaagctctaaaccaag 630  T
Q  112 tggggagtatctctggttgggatctacgtgataagtaagtaattt 156  Q
    ||||||||||| |||||||||||||||||||||||||||||||||    
T  629 tggggagtatcgctggttgggatctacgtgataagtaagtaattt 585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0428 (Bit Score: 81; Significance: 2e-38; HSPs: 1)
Name: scaffold0428
Description:

Target: scaffold0428; HSP #1
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 12 - 156
Target Start/End: Complemental strand, 9490 - 9346
Alignment:
Q  12 aagcatagggggatttattgtgaagcctttgtcaaacatgaacaaagattccaacaagactttgagatggtgtcaagatggagggaagctctaaaacatg 111  Q
    ||||| || ||||||||||| || |  |||| ||||||||||||||||||| ||||||||  | | | ||||||||||||||||||||||||||| || |    
T  9490 aagcaaagtgggatttattgggacgattttgccaaacatgaacaaagattcaaacaagaccctcataaggtgtcaagatggagggaagctctaaaccaag 9391  T
Q  112 tggggagtatctctggttgggatctacgtgataagtaagtaattt 156  Q
    ||||||||||| |||||||||||||||||||||||||||||||||    
T  9390 tggggagtatcgctggttgggatctacgtgataagtaagtaattt 9346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 66; Significance: 2e-29; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 24 - 149
Target Start/End: Original strand, 31496465 - 31496590
Alignment:
Q  24 atttattgtgaagcctttgtcaaacatgaacaaagattccaacaagactttgagatggtgtcaagatggagggaagctctaaaacatgtggggagtatct 123  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||||| | ||||||||  |||||||||||||||||||| ||| || |    | |||    
T  31496465 atttatggtgaagcatttgtcaaacatgaacaaagattccaacaagactctcagatggtgcaaagatggagggaagctctaatacaagtcgctgatctct 31496564  T
Q  124 ctggttgggatctacgtgataagtaa 149  Q
    ||||||||||||||| ||||||||||    
T  31496565 ctggttgggatctacatgataagtaa 31496590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 12 - 149
Target Start/End: Original strand, 31501623 - 31501760
Alignment:
Q  12 aagcatagggggatttattgtgaagcctttgtcaaacatgaacaaagattccaacaagactttgagatggtgtcaagatggagggaagctctaaaacatg 111  Q
    ||||| || ||||||||||||||||| ||||||||||||||||||| |||||||||||||| | ||||||||  |||||||||||||||||| | ||| |    
T  31501623 aagcaaagtgggatttattgtgaagcatttgtcaaacatgaacaaatattccaacaagactctcagatggtgctaagatggagggaagctctgacacaag 31501722  T
Q  112 tggggagtatctctggttgggatctacgtgataagtaa 149  Q
    | |   || | |||||||| ||||||||||||||||||    
T  31501723 tcgccggtctatctggttgcgatctacgtgataagtaa 31501760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 32 - 154
Target Start/End: Complemental strand, 31162213 - 31162093
Alignment:
Q  32 tgaagcctttgtcaaacatgaacaaagattccaacaagactttgagatggtgtcaagatggagggaagctctaaaacatgtggggagtatctctggttgg 131  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||| || ||| || |  |  ||||||||||||    
T  31162213 tgaagcctttttcaaacatgaacaaagattccaacaagactctgagatggtgcaaagatggagggaagctcaaacacaagtcgcca--atctctggttgg 31162116  T
Q  132 gatctacgtgataagtaagtaat 154  Q
    ||| | ||| |||||||||||||    
T  31162115 gatgtgcgtcataagtaagtaat 31162093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 31 - 150
Target Start/End: Complemental strand, 31020435 - 31020316
Alignment:
Q  31 gtgaagcctttgtcaaacatgaacaaagattccaacaagactttgagatggtgtcaagatggagggaagctctaaaacatgtggggagtatctctggttg 130  Q
    |||||||||||  |||||||||||||| ||||||||| |||| | |  ||||   ||| |||||||||||||| | ||| ||||||| ||||||||| ||    
T  31020435 gtgaagccttttccaaacatgaacaaacattccaacatgactctcatgtggtacaaagttggagggaagctctgacacaagtggggaatatctctggctg 31020336  T
Q  131 ggatctacgtgataagtaag 150  Q
    |||||| |||||||||||||    
T  31020335 ggatcttcgtgataagtaag 31020316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 31 - 150
Target Start/End: Original strand, 31489117 - 31489236
Alignment:
Q  31 gtgaagcctttgtcaaacatgaacaaagattccaacaagactttgagatggtgtcaagatggagggaagctctaaaacatgtggggagtatctctggttg 130  Q
    |||||||||||  |||||||||||||| ||||||||| |||| | |  ||||   |||||||||||||||||| | ||| ||||||| |||||| || ||    
T  31489117 gtgaagccttttccaaacatgaacaaacattccaacatgactctcatgtggtacaaagatggagggaagctctgacacaagtggggaatatctcaggctg 31489216  T
Q  131 ggatctacgtgataagtaag 150  Q
    |||||| |||||||||||||    
T  31489217 ggatcttcgtgataagtaag 31489236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 31 - 150
Target Start/End: Complemental strand, 31030316 - 31030197
Alignment:
Q  31 gtgaagcctttgtcaaacatgaacaaagattccaacaagactttgagatggtgtcaagatggagggaagctctaaaacatgtggggagtatctctggttg 130  Q
    |||||||||||  |||||||||||||| ||||||||| || | | |  ||||   ||| |||||||||||||| | ||| ||||||| ||||||||| ||    
T  31030316 gtgaagccttttccaaacatgaacaaacattccaacatgaatctcatgtggtacaaagttggagggaagctctgacacaagtggggaatatctctggctg 31030217  T
Q  131 ggatctacgtgataagtaag 150  Q
    |||||| |||||||||||||    
T  31030216 ggatcttcgtgataagtaag 31030197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 32 - 154
Target Start/End: Complemental strand, 31150938 - 31150816
Alignment:
Q  32 tgaagcctttgtcaaacatgaacaaagattccaacaagactttgagatggtgtcaagatggagggaagctctaaaacatgtggggagtatctctggttgg 131  Q
    ||||||||| |  ||||||||| |||||||||||||| ||||||| || |||  ||||||||||||||| || | ||| ||||  | | ||||||| |||    
T  31150938 tgaagccttagctaaacatgaagaaagattccaacaaaactttgaaattgtgcaaagatggagggaagcactgacacaagtggccaatctctctggatgg 31150839  T
Q  132 gatctacgtgataagtaagtaat 154  Q
    ||| ||||| |||||||||||||    
T  31150838 gatgtacgttataagtaagtaat 31150816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 21 - 154
Target Start/End: Original strand, 31476522 - 31476655
Alignment:
Q  21 gggatttattgtgaagcctttgtcaaacatgaacaaagattccaacaagactttgagatggtgtcaagatggagggaagctctaaaacatgtggggagta 120  Q
    ||||||||| ||||||| |||||| |||||| ||| |||||| ||||||||| | | ||||||  | ||||||||| |||||| | ||| || |    |     
T  31476522 gggatttatagtgaagcatttgtccaacatggacacagattcaaacaagactctcaaatggtgctacgatggagggcagctctgacacaagtcgccgatc 31476621  T
Q  121 tctctggttgggatctacgtgataagtaagtaat 154  Q
    ||||||||||||||||||||||||||||| ||||    
T  31476622 tctctggttgggatctacgtgataagtaaataat 31476655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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