View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17716_low_24 (Length: 466)
Name: NF17716_low_24
Description: NF17716
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17716_low_24 |
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Alignment Details
Target: chr5 (Bit Score: 257; Significance: 1e-143; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 25 - 293
Target Start/End: Original strand, 16627616 - 16627884
Alignment:
| Q |
25 |
agacttctatcatatcattctatttttgcgtatttattatattttggtgaaaataacaaaagaaataaatgtgaaagagacaaaggaagttgcatgacaa |
124 |
Q |
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| T |
16627616 |
agacttctgtcatatcattctatttttgcgtatttattatatttaggtgaaaataataaaagaaataaatgtgaaagagacaaaggaagttgcatgacaa |
16627715 |
T |
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| Q |
125 |
aaattaatatgcataaaacaaagacgatgatgtcacatcagaaaatggatctatgacaagattttatgtgcaacaaaataagctgagctgaattgtgaat |
224 |
Q |
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| T |
16627716 |
aaattaatatgcataaaacaaagacgatgatgtcacatcagaaaatggatctatgacaagattttatgtgcaacaaaataagctgagctgaattgtgaat |
16627815 |
T |
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| Q |
225 |
tccactaactgaattttttattatcctcgttttgtttaaaatttatgtatattgttacttttactacat |
293 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
16627816 |
tccactaactgaattttttattatcctcgttttgtttaaaatttatgtatattgttacttttactacat |
16627884 |
T |
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