View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17716_low_74 (Length: 290)
Name: NF17716_low_74
Description: NF17716
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17716_low_74 |
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Alignment Details
Target: chr7 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 46287770 - 46287503
Alignment:
| Q |
1 |
cgatgatatttatgtcttagggtaacatcggtggaagaaaaattagggagaagaaaactatttgagaggctgtgggttttccaaaactggaactattaaa |
100 |
Q |
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| T |
46287770 |
cgatgatatttatgtcttagggtaacatcggtgaaagaaaaattagggagaagaaaactatttgagaggttgtgggttttccaaaactggaactattaaa |
46287671 |
T |
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| Q |
101 |
tttggggttgaatttttattatctttatatgtagtcatgacatgacatctatgttggcaagtagccagggtaatttgcacattccagccagctatattaa |
200 |
Q |
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| T |
46287670 |
tttggggttgaatttttattatctttatatgtagtcatgacatgacatctatgttggcaagtagccagggtaatttgcacattccagccaactatattaa |
46287571 |
T |
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| Q |
201 |
attggtaatttgatttataat---aatagccatctttaactatggatggttaaatatggagcaaatag |
265 |
Q |
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| T |
46287570 |
attggtaatttgatttataataataatagccatctttaacgttggatggttaaatattgaacaaatag |
46287503 |
T |
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