View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17718_low_22 (Length: 204)
Name: NF17718_low_22
Description: NF17718
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17718_low_22 |
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Alignment Details
Target: chr1 (Bit Score: 173; Significance: 3e-93; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 173; E-Value: 3e-93
Query Start/End: Original strand, 12 - 188
Target Start/End: Complemental strand, 34669672 - 34669496
Alignment:
| Q |
12 |
tgagaagaatgtttgtcttgaaatgaaactctgtccatattttgcaatgaagtcaattctgtatcttgaactacgctgctagcaaatgaagttgaaacat |
111 |
Q |
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| T |
34669672 |
tgagaagaatgtttgtcttgaaatgaaactctgtccatattttgcaatgaagtcaattctgtatcttgaactatgctgctagcaaatgaagttgaaacat |
34669573 |
T |
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| Q |
112 |
ctgcaacttcctgtgccattatttcagatacaaattgttgctccaatgactcaaaacaagatttttcaccaaaaaga |
188 |
Q |
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| T |
34669572 |
ctgcaacttcctgtgccattatttcagatacaaattgttgctccaatgactcaaaacaagatttttcaccaaaaaga |
34669496 |
T |
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