View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17718_low_3 (Length: 489)

Name: NF17718_low_3
Description: NF17718
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17718_low_3
NF17718_low_3
[»] chr1 (22 HSPs)
chr1 (140-471)||(12767849-12768180)
chr1 (395-475)||(21096641-21096717)
chr1 (394-476)||(51086565-51086651)
chr1 (392-475)||(25655662-25655741)
chr1 (394-475)||(30838843-30838921)
chr1 (395-475)||(29522050-29522126)
chr1 (408-475)||(7556108-7556171)
chr1 (381-475)||(33704389-33704480)
chr1 (396-475)||(35954226-35954301)
chr1 (385-475)||(36307642-36307729)
chr1 (395-475)||(10772541-10772618)
chr1 (395-475)||(44512524-44512601)
chr1 (395-475)||(30303083-30303159)
chr1 (395-476)||(52404471-52404548)
chr1 (408-475)||(31032056-31032120)
chr1 (408-475)||(35956297-35956360)
chr1 (394-475)||(31029891-31029969)
chr1 (408-475)||(33706550-33706614)
chr1 (400-475)||(9132860-9132931)
chr1 (395-456)||(24780868-24780930)
chr1 (407-476)||(34334463-34334528)
chr1 (408-452)||(36732486-36732530)
[»] chr6 (23 HSPs)
chr6 (189-475)||(21861397-21861683)
chr6 (65-149)||(21861684-21861768)
chr6 (394-475)||(24082990-24083067)
chr6 (393-475)||(11837782-11837861)
chr6 (395-474)||(12142843-12142918)
chr6 (395-475)||(14103784-14103861)
chr6 (395-475)||(23580078-23580155)
chr6 (408-475)||(28578431-28578494)
chr6 (394-475)||(17551012-17551090)
chr6 (394-476)||(25109345-25109423)
chr6 (403-456)||(4590021-4590075)
chr6 (393-475)||(27782257-27782336)
chr6 (395-475)||(11154818-11154895)
chr6 (394-475)||(24178579-24178656)
chr6 (395-475)||(27438205-27438282)
chr6 (408-476)||(5686350-5686414)
chr6 (408-475)||(16922241-16922305)
chr6 (408-475)||(17557585-17557649)
chr6 (408-475)||(14105931-14105995)
chr6 (408-475)||(27784418-27784482)
chr6 (408-475)||(28580952-28581015)
chr6 (408-476)||(4587874-4587939)
chr6 (65-93)||(13167125-13167153)
[»] scaffold0060 (2 HSPs)
scaffold0060 (140-365)||(55972-56197)
scaffold0060 (416-475)||(56204-56263)
[»] chr5 (30 HSPs)
chr5 (140-365)||(35239225-35239449)
chr5 (395-475)||(34401510-34401586)
chr5 (395-475)||(37270239-37270315)
chr5 (390-476)||(27020211-27020294)
chr5 (393-475)||(42612387-42612466)
chr5 (395-475)||(745732-745809)
chr5 (395-475)||(34663572-34663648)
chr5 (394-475)||(12499212-12499290)
chr5 (395-475)||(9591605-9591682)
chr5 (395-475)||(37940120-37940197)
chr5 (395-475)||(31552289-31552362)
chr5 (393-475)||(39588251-39588330)
chr5 (394-471)||(7181213-7181287)
chr5 (395-475)||(19664757-19664834)
chr5 (408-475)||(30128638-30128702)
chr5 (408-475)||(37938505-37938569)
chr5 (408-475)||(39590709-39590773)
chr5 (145-191)||(13610035-13610081)
chr5 (408-475)||(15527413-15527476)
chr5 (408-475)||(19505041-19505104)
chr5 (385-475)||(34857933-34858019)
chr5 (408-475)||(822831-822895)
chr5 (408-475)||(9593827-9593891)
chr5 (408-475)||(12501401-12501465)
chr5 (395-475)||(13305597-13305673)
chr5 (408-475)||(7179672-7179735)
chr5 (408-475)||(9985372-9985435)
chr5 (395-452)||(11076789-11076847)
chr5 (414-475)||(42609923-42609981)
chr5 (395-475)||(20546322-20546399)
[»] chr8 (36 HSPs)
chr8 (395-475)||(38577188-38577264)
chr8 (391-475)||(27911877-27911958)
chr8 (391-475)||(27958296-27958377)
chr8 (395-475)||(3846499-3846575)
chr8 (395-475)||(6093182-6093258)
chr8 (395-475)||(45409286-45409362)
chr8 (397-475)||(17853418-17853493)
chr8 (395-475)||(25583748-25583825)
chr8 (393-476)||(44255951-44256031)
chr8 (389-475)||(15883559-15883642)
chr8 (408-475)||(38576599-38576662)
chr8 (408-475)||(39859940-39860003)
chr8 (395-476)||(276577-276655)
chr8 (395-476)||(639194-639272)
chr8 (395-476)||(825000-825078)
chr8 (402-476)||(41544843-41544913)
chr8 (399-475)||(4622886-4622959)
chr8 (394-456)||(2082431-2082494)
chr8 (408-475)||(3703181-3703245)
chr8 (408-475)||(16097605-16097669)
chr8 (408-475)||(18957397-18957461)
chr8 (408-475)||(26965377-26965441)
chr8 (408-475)||(6096824-6096887)
chr8 (408-474)||(17852402-17852465)
chr8 (413-475)||(40302432-40302490)
chr8 (408-476)||(17946596-17946661)
chr8 (396-452)||(18089527-18089583)
chr8 (408-475)||(278724-278788)
chr8 (408-475)||(637064-637128)
chr8 (408-475)||(822867-822931)
chr8 (408-475)||(4621495-4621559)
chr8 (408-475)||(23345184-23345248)
chr8 (408-475)||(38059256-38059320)
chr8 (390-475)||(38060908-38060990)
chr8 (395-475)||(17948640-17948717)
chr8 (395-475)||(18955093-18955170)
[»] chr7 (38 HSPs)
chr7 (392-475)||(9663694-9663773)
chr7 (397-475)||(17968403-17968477)
chr7 (395-475)||(725628-725705)
chr7 (395-475)||(44459398-44459475)
chr7 (393-476)||(4859569-4859649)
chr7 (395-475)||(48607720-48607795)
chr7 (397-475)||(20119874-20119949)
chr7 (395-475)||(16277668-16277745)
chr7 (394-475)||(33246744-33246821)
chr7 (408-476)||(40013634-40013699)
chr7 (408-475)||(4861905-4861969)
chr7 (393-456)||(41289679-41289741)
chr7 (408-475)||(17286338-17286401)
chr7 (395-435)||(5374615-5374655)
chr7 (390-452)||(8393441-8393501)
chr7 (408-475)||(16273921-16273985)
chr7 (408-475)||(44456908-44456972)
chr7 (408-475)||(23592551-23592614)
chr7 (395-476)||(40015778-40015856)
chr7 (410-476)||(41287568-41287630)
chr7 (396-452)||(41858667-41858724)
chr7 (440-476)||(241551-241587)
chr7 (395-475)||(41336117-41336194)
chr7 (411-475)||(47906961-47907022)
chr7 (391-475)||(23594629-23594708)
chr7 (408-475)||(38179672-38179736)
chr7 (408-475)||(41338275-41338339)
chr7 (411-475)||(48605704-48605763)
chr7 (408-475)||(9659022-9659085)
chr7 (408-475)||(21737439-21737501)
chr7 (404-475)||(48683073-48683140)
chr7 (408-475)||(48684571-48684634)
chr7 (408-452)||(723497-723542)
chr7 (410-475)||(37708365-37708426)
chr7 (395-475)||(38229769-38229843)
chr7 (145-189)||(38644981-38645025)
chr7 (412-476)||(46553450-46553511)
chr7 (395-475)||(46555586-46555663)
[»] chr4 (39 HSPs)
chr4 (392-475)||(13534718-13534797)
chr4 (391-475)||(16664478-16664558)
chr4 (395-475)||(31292755-31292831)
chr4 (396-475)||(34072854-34072929)
chr4 (397-475)||(49873550-49873624)
chr4 (395-476)||(17520083-17520160)
chr4 (395-475)||(20354229-20354305)
chr4 (395-475)||(50496284-50496360)
chr4 (394-475)||(41041596-41041674)
chr4 (395-475)||(4652786-4652863)
chr4 (395-475)||(7487061-7487138)
chr4 (395-475)||(23419460-23419537)
chr4 (408-475)||(46719687-46719750)
chr4 (392-476)||(17360958-17361039)
chr4 (408-476)||(16666657-16666721)
chr4 (395-475)||(20787195-20787271)
chr4 (395-475)||(35824323-35824399)
chr4 (394-456)||(52447198-52447261)
chr4 (408-476)||(8941225-8941290)
chr4 (403-472)||(31309421-31309486)
chr4 (408-475)||(23417211-23417275)
chr4 (140-215)||(45147121-45147196)
chr4 (408-475)||(23931602-23931665)
chr4 (396-475)||(38623612-38623687)
chr4 (408-475)||(43304844-43304907)
chr4 (145-191)||(54131181-54131227)
chr4 (390-475)||(23933709-23933790)
chr4 (408-475)||(20352039-20352103)
chr4 (408-475)||(30823708-30823772)
chr4 (408-475)||(41039585-41039649)
chr4 (408-476)||(47805608-47805672)
chr4 (408-475)||(49970377-49970441)
chr4 (395-434)||(54919226-54919265)
chr4 (408-475)||(54921373-54921437)
chr4 (408-475)||(13530046-13530109)
chr4 (408-475)||(27956539-27956602)
chr4 (416-475)||(28172168-28172223)
chr4 (393-475)||(48952774-48952852)
chr4 (408-476)||(49875716-49875781)
[»] chr2 (24 HSPs)
chr2 (384-475)||(15152360-15152447)
chr2 (395-475)||(2292479-2292555)
chr2 (397-475)||(28391939-28392013)
chr2 (395-475)||(27551734-27551810)
chr2 (395-476)||(14006185-14006263)
chr2 (395-475)||(3907041-3907118)
chr2 (394-474)||(3851813-3851889)
chr2 (395-475)||(4738400-4738476)
chr2 (394-457)||(15398807-15398870)
chr2 (393-475)||(38282399-38282478)
chr2 (394-475)||(77735-77813)
chr2 (395-475)||(39775187-39775261)
chr2 (408-475)||(39965191-39965255)
chr2 (408-471)||(2290397-2290456)
chr2 (394-475)||(6644536-6644613)
chr2 (408-476)||(1053147-1053211)
chr2 (403-475)||(3767892-3767960)
chr2 (408-475)||(25225383-25225447)
chr2 (395-475)||(37726056-37726131)
chr2 (403-475)||(38932511-38932579)
chr2 (408-475)||(3849805-3849868)
chr2 (408-452)||(3904932-3904977)
chr2 (416-456)||(39067062-39067102)
chr2 (394-475)||(42080885-42080962)
[»] chr3 (58 HSPs)
chr3 (395-476)||(37220241-37220319)
chr3 (394-475)||(53845125-53845203)
chr3 (397-475)||(44843334-44843409)
chr3 (399-456)||(3892835-3892892)
chr3 (395-475)||(8852286-8852363)
chr3 (395-475)||(13213286-13213363)
chr3 (395-475)||(22604711-22604788)
chr3 (395-475)||(23019678-23019755)
chr3 (395-475)||(30043627-30043704)
chr3 (392-475)||(4233184-4233264)
chr3 (397-475)||(45169817-45169892)
chr3 (393-475)||(50548630-50548709)
chr3 (395-476)||(6177346-6177424)
chr3 (395-477)||(10827775-10827853)
chr3 (395-475)||(2217871-2217948)
chr3 (395-475)||(15084707-15084784)
chr3 (396-475)||(41101505-41101581)
chr3 (408-475)||(45172698-45172762)
chr3 (401-475)||(18410058-18410129)
chr3 (396-475)||(40423500-40423574)
chr3 (398-475)||(11121075-11121149)
chr3 (392-474)||(55411091-55411169)
chr3 (408-476)||(13243556-13243621)
chr3 (395-475)||(27320852-27320929)
chr3 (394-475)||(51722959-51723036)
chr3 (408-452)||(55219885-55219929)
chr3 (408-475)||(23022009-23022073)
chr3 (400-475)||(27239198-27239270)
chr3 (408-475)||(27330126-27330190)
chr3 (408-475)||(37218180-37218244)
chr3 (408-475)||(37785292-37785356)
chr3 (408-475)||(40908473-40908537)
chr3 (403-475)||(43338223-43338291)
chr3 (412-475)||(47910968-47911028)
chr3 (408-475)||(38698793-38698856)
chr3 (408-475)||(50535968-50536031)
chr3 (408-471)||(51720873-51720932)
chr3 (408-472)||(11123632-11123693)
chr3 (399-475)||(40905999-40906072)
chr3 (403-475)||(47913091-47913160)
chr3 (408-475)||(2219960-2220024)
chr3 (408-475)||(27128153-27128217)
chr3 (408-476)||(31311679-31311743)
chr3 (395-434)||(37785253-37785292)
chr3 (399-475)||(38696695-38696767)
chr3 (408-475)||(41695927-41695991)
chr3 (408-475)||(44841237-44841301)
chr3 (408-475)||(50546484-50546548)
chr3 (408-475)||(53583688-53583752)
chr3 (408-475)||(18763898-18763961)
chr3 (408-452)||(4230859-4230904)
chr3 (408-452)||(30438278-30438323)
chr3 (410-475)||(52745669-52745731)
chr3 (407-475)||(8849764-8849829)
chr3 (403-475)||(27126047-27126116)
chr3 (398-475)||(32001218-32001291)
chr3 (395-475)||(42825855-42825932)
chr3 (408-456)||(42827988-42828036)
[»] scaffold0115 (1 HSPs)
scaffold0115 (397-475)||(20718-20793)
[»] scaffold0779 (1 HSPs)
scaffold0779 (408-476)||(139-204)
[»] scaffold0003 (1 HSPs)
scaffold0003 (395-475)||(49080-49157)
[»] scaffold0006 (1 HSPs)
scaffold0006 (408-475)||(56484-56548)
[»] scaffold0208 (2 HSPs)
scaffold0208 (408-475)||(3873-3936)
scaffold0208 (404-475)||(5877-5944)


Alignment Details
Target: chr1 (Bit Score: 268; Significance: 1e-149; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 140 - 471
Target Start/End: Original strand, 12767849 - 12768180
Alignment:
Q  140 gctcgggctagcgtgagcgaccaacatagatctctcacagtgcaaattgaatggtgtccattagatatattattattaaatgctgcgttcaagatgtttt 239  Q
    |||| ||||||||||||| |||||||||| |||||||| ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  12767849 gctcaggctagcgtgagcaaccaacataggtctctcacggtgcaaactgattggtgtccattagatatattattattaaatgctgcgttcaagatgtttt 12767948  T
Q  240 acttgaaaccttttgcaacagtgtttgttaggcattaaaaattctattaaaagtaacaggtcataaattcagataaatcatttgcaaaattagtgggttg 339  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  12767949 acttgaaaccttttgcaacagtgtttgttaggcattacaaattctattaaaagtaccaggtcataaattcagataaatcatttgcaaaattagtgggttg 12768048  T
Q  340 gcacgtgttgcaaataaagacaaaaagatttagtcttaaagaatgataaaaaattggtgaggcctacgttaccctctcttatttagagggtaattactct 439  Q
    |||||  ||||||||||||||||||| || ||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||| ||    
T  12768049 gcacgcattgcaaataaagacaaaaaaatatagtcttaaagaatgataaaaaattagtgaggcttacgttaacctctcttatttagagggtaattaccct 12768148  T
Q  440 ctcatgatatcaatcaaccaatcaaaatgtaa 471  Q
    ||||||||||||||||||||||||||||||||    
T  12768149 ctcatgatatcaatcaaccaatcaaaatgtaa 12768180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 395 - 475
Target Start/End: Original strand, 21096641 - 21096717
Alignment:
Q  395 ggtgaggcctacgttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||||||||||||||||||||| |||||||||||| ||||||||||||||    ||||||||||||||||||||||||    
T  21096641 ggtgaggcctacgttaccctctcttgtttagagggtaaatactctctcatgat----atcaaccaatcaaaatgtaatata 21096717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 394 - 476
Target Start/End: Original strand, 51086565 - 51086651
Alignment:
Q  394 tggtgaggcctacgttaccctctcttatttagagggtaattactctctcatgatatca----atcaaccaatcaaaatgtaatatat 476  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||  | |||    |||||||||||||||||||||||||    
T  51086565 tggtgaggcctacgttaccctctcttatttagagggtaattaccctctcattctctcatgatatcaaccaatcaaaatgtaatatat 51086651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 392 - 475
Target Start/End: Original strand, 25655662 - 25655741
Alignment:
Q  392 attggtgaggcctacgttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    |||||||||| |||||||||||| |||| |||||||||||||||| || |||||||||||||    ||||||||||||||||||    
T  25655662 attggtgaggtctacgttaccctttcttgtttagagggtaattaccctttcatgatatcaat----caatcaaaatgtaatata 25655741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 394 - 475
Target Start/End: Complemental strand, 30838921 - 30838843
Alignment:
Q  394 tggtgaggcctacgttaccctctcttatttagagggtaa-ttactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||||||||||||||||||||||||||||||||||| |||| |||| |||||    ||||||||||||||||||| ||||    
T  30838921 tggtgaggcctacgttaccctctcttatttagagggtaatttaccctcttatgat----atcaaccaatcaaaatgtactata 30838843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 395 - 475
Target Start/End: Complemental strand, 29522126 - 29522050
Alignment:
Q  395 ggtgaggcctacgttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||| ||| ||||||||||||| |||||||||||||||| || ||||||||    |||||||||||||||||||||||    
T  29522126 ggtgaggtctaggttaccctctcttgtttagagggtaattaccctgtcatgata----tcaaccaatcaaaatgtaatata 29522050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 408 - 475
Target Start/End: Original strand, 7556108 - 7556171
Alignment:
Q  408 ttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    |||||||||||| |||||||||||||||| ||||||||||||||||    ||||||||||||||||||    
T  7556108 ttaccctctcttgtttagagggtaattaccctctcatgatatcaat----caatcaaaatgtaatata 7556171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 381 - 475
Target Start/End: Original strand, 33704389 - 33704480
Alignment:
Q  381 aatgataaaaaattggtgaggcctacgttaccctctcttatttagagggtaa-ttactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    |||||||| ||  |||||| ||||||||||||||||||| |||||||||||| |||| |||||||| |    ||||||||||||||||||||||||    
T  33704389 aatgataataatatggtgaagcctacgttaccctctcttgtttagagggtaatttaccctctcatgtt----atcaaccaatcaaaatgtaatata 33704480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 396 - 475
Target Start/End: Original strand, 35954226 - 35954301
Alignment:
Q  396 gtgaggcctacgttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    |||||||||| ||||||||||||| |||||||||||||||| || |||||||    ||||||||||| ||||||||||||    
T  35954226 gtgaggcctatgttaccctctcttgtttagagggtaattaccctatcatgat----atcaaccaatcgaaatgtaatata 35954301  T

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Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 385 - 475
Target Start/End: Original strand, 36307642 - 36307729
Alignment:
Q  385 ataaaaaattggtgaggcctacgttaccctctcttatttagagggtaa-ttactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||||| ||||||| ||| ||||||||||||| |||||||||||| |||  ||||||||||    ||||||||||||||||||||||||    
T  36307642 ataaaaaataggtgaggtctatgttaccctctcttgtttagagggtaatttatcctctcatgat----atcaaccaatcaaaatgtaatata 36307729  T

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Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 395 - 475
Target Start/End: Original strand, 10772541 - 10772618
Alignment:
Q  395 ggtgaggcctacgttaccctctcttatttagagggtaa-ttactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||| |||||||||| |||||||| |||||||||||| |||| ||||||||||    ||||||||||||||||||||||||    
T  10772541 ggtgaagcctacgttatcctctcttgtttagagggtaatttaccctctcatgat----atcaaccaatcaaaatgtaatata 10772618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 395 - 475
Target Start/End: Complemental strand, 44512601 - 44512524
Alignment:
Q  395 ggtgaggcctacgttaccctctcttatttagagggtaatt-actctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    |||||||||||| |||| ||||||| |||||||| ||||| ||||||||||||||||||    |||||||||||||||||||    
T  44512601 ggtgaggcctacattactctctcttgtttagaggttaatttactctctcatgatatcaa----ccaatcaaaatgtaatata 44512524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 395 - 475
Target Start/End: Complemental strand, 30303159 - 30303083
Alignment:
Q  395 ggtgaggcctacgttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    |||||| |||||||||||||||||| ||||| || ||||||  |||||||||||    |||||||||||||||||||||||    
T  30303159 ggtgagacctacgttaccctctcttgtttaggggataattatcctctcatgata----tcaaccaatcaaaatgtaatata 30303083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 395 - 476
Target Start/End: Original strand, 52404471 - 52404548
Alignment:
Q  395 ggtgaggcctacgttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatatat 476  Q
    |||||||| ||||||||||| |||| ||||  |||||||||| ||||||||||    |||||||||||||||| ||||||||    
T  52404471 ggtgaggcttacgttaccctatcttgtttatggggtaattaccctctcatgat----atcaaccaatcaaaatataatatat 52404548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 408 - 475
Target Start/End: Complemental strand, 31032120 - 31032056
Alignment:
Q  408 ttaccctctcttatttagagggtaatt-actctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    |||||||||||||||||||||||| || || |||||||||||||||    |||||||||||||||||||    
T  31032120 ttaccctctcttatttagagggtattttaccctctcatgatatcaa----ccaatcaaaatgtaatata 31032056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 408 - 475
Target Start/End: Complemental strand, 35956360 - 35956297
Alignment:
Q  408 ttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    |||||||||||| ||||||||||| |||| |||||||||||    ||||||||||||||| |||||||    
T  35956360 ttaccctctcttgtttagagggtatttaccctctcatgata----tcaaccaatcaaaatataatata 35956297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 394 - 475
Target Start/End: Original strand, 31029891 - 31029969
Alignment:
Q  394 tggtgaggcctacgttaccctctcttatttagagggtaa-ttactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    |||||| | ||| |||| |||||||| |||||||||||| |||| ||||||||||||||||    ||||||||||||||||||    
T  31029891 tggtgaagtctatgttatcctctcttgtttagagggtaatttaccctctcatgatatcaat----caatcaaaatgtaatata 31029969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 408 - 475
Target Start/End: Complemental strand, 33706614 - 33706550
Alignment:
Q  408 ttaccctctcttatttagagggtaatt-actctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||| |||||||||||||||| || || |||||||||||||||    |||||||||||||||||||    
T  33706614 ttaccctatcttatttagagggtattttaccctctcatgatatcaa----ccaatcaaaatgtaatata 33706550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 400 - 475
Target Start/End: Original strand, 9132860 - 9132931
Alignment:
Q  400 ggcctacgttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||| ||||| |||||| |||||  ||||||||| ||||||||||    || |||||||||||||||||||||    
T  9132860 ggcctacattaccttctcttgtttaggaggtaattaccctctcatgat----attaaccaatcaaaatgtaatata 9132931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 395 - 456
Target Start/End: Original strand, 24780868 - 24780930
Alignment:
Q  395 ggtgaggcctacgttaccctctcttatttagagggtaa-ttactctctcatgatatcaatcaa 456  Q
    |||||||| ||| ||||||| |||| |||||||||||| ||||  ||||||||||||||||||    
T  24780868 ggtgaggcatactttaccctatcttgtttagagggtaatttaccgtctcatgatatcaatcaa 24780930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 407 - 476
Target Start/End: Complemental strand, 34334528 - 34334463
Alignment:
Q  407 gttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatatat 476  Q
    |||| |||||||||||||   ||||||||||||||||| ||    |||||||||||||||| ||||||||    
T  34334528 gttatcctctcttatttaagaggtaattactctctcatcat----atcaaccaatcaaaatataatatat 34334463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 408 - 452
Target Start/End: Complemental strand, 36732530 - 36732486
Alignment:
Q  408 ttaccctctcttatttagagggtaattactctctcatgatatcaa 452  Q
    |||||||| ||||||||||||||| |||| || ||||||||||||    
T  36732530 ttaccctcgcttatttagagggtatttaccctttcatgatatcaa 36732486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 259; Significance: 1e-144; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 189 - 475
Target Start/End: Complemental strand, 21861683 - 21861397
Alignment:
Q  189 aatggtgtccattagatatattattattaaatgctgcgttcaagatgttttacttgaaaccttttgcaacagtgtttgttaggcattaaaaattctatta 288  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21861683 aatggtgtccattagatatattattattaaatgttgcgttcaagatgttttacttgaaaccttttgcaacagtgtttgttaggcattaaaaattctatta 21861584  T
Q  289 aaagtaacaggtcataaattcagataaatcatttgcaaaattagtgggttggcacgtgttgcaaataaagacaaaaagatttagtcttaaagaatgataa 388  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||    
T  21861583 aaagtaacaggtcataaattcagataaatcatttgcaaaattagtgggttggcacgtgttacaaataaagacaaaaagatttagtcttaaagaatgacaa 21861484  T
Q  389 aaaattggtgaggcctacgttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    |||||||||||||| |||||||| ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  21861483 aaaattggtgaggcatacgttacactctcttatttaggggataattactctctcatgatatcaatcaaccaatcaaaatgtaatata 21861397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 65 - 149
Target Start/End: Complemental strand, 21861768 - 21861684
Alignment:
Q  65 agaggactagactcaaataaataaataaaccnnnnnnnggagaccaacccgaacataattattgaaacaaaaagagctcgggcta 149  Q
    |||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  21861768 agaggactagactcaaataaataaataaaccaaaaaaaggagaccaacccgaacataattattgaaacaaaaagagctcgggcta 21861684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 394 - 475
Target Start/End: Original strand, 24082990 - 24083067
Alignment:
Q  394 tggtgaggcctacgttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||    |||||||||||| |||||||||||    
T  24082990 tggtgaggcctacgttaccctctcttatttagagggtaattaccctctcatgat----atcaaccaatcataatgtaatata 24083067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 393 - 475
Target Start/End: Complemental strand, 11837861 - 11837782
Alignment:
Q  393 ttggtgaggcctacgttaccctctcttatttagagggtaa-ttactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||||||||||||||||||||||| |||||||||||| |||| ||||||||||    ||||||||||||||||||||||||    
T  11837861 ttggtgaggcctacgttaccctctcttgtttagagggtaatttaccctctcatgat----atcaaccaatcaaaatgtaatata 11837782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 395 - 474
Target Start/End: Complemental strand, 12142918 - 12142843
Alignment:
Q  395 ggtgaggcctacgttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatat 474  Q
    ||||||||||||||||||||||||| ||||| || ||||||||||||||||||     ||||||||||||||||||||||    
T  12142918 ggtgaggcctacgttaccctctcttgtttaggggataattactctctcatgat----ttcaaccaatcaaaatgtaatat 12142843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 395 - 475
Target Start/End: Original strand, 14103784 - 14103861
Alignment:
Q  395 ggtgaggcctacgttaccctctcttatttagagggtaa-ttactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||||||||||||||||||||| |||||||||||| |||| |||||| |||    ||||||||||||||||||||||||    
T  14103784 ggtgaggcctacgttaccctctcttgtttagagggtaatttaccctctcacgat----atcaaccaatcaaaatgtaatata 14103861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 395 - 475
Target Start/End: Original strand, 23580078 - 23580155
Alignment:
Q  395 ggtgaggcctacgttaccctctcttatttagagggtaa-ttactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    |||||||||||| |||||||||||| |||||||||||| |||| ||||||||||    ||||||||||||||||||||||||    
T  23580078 ggtgaggcctaccttaccctctcttgtttagagggtaatttaccctctcatgat----atcaaccaatcaaaatgtaatata 23580155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 408 - 475
Target Start/End: Original strand, 28578431 - 28578494
Alignment:
Q  408 ttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    |||||||||||| |||||||||||||||||||||||| ||    ||||||||||||||||||||||||    
T  28578431 ttaccctctcttctttagagggtaattactctctcattat----atcaaccaatcaaaatgtaatata 28578494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 394 - 475
Target Start/End: Complemental strand, 17551090 - 17551012
Alignment:
Q  394 tggtgaggcctacgttaccctctcttatttagagggtaa-ttactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    |||||| ||||||||||||||||||| |||| ||||||| |||| ||||||||||    ||||||||||||||||||||||||    
T  17551090 tggtgaagcctacgttaccctctcttgtttaaagggtaatttaccctctcatgat----atcaaccaatcaaaatgtaatata 17551012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 394 - 476
Target Start/End: Original strand, 25109345 - 25109423
Alignment:
Q  394 tggtgaggcctacgttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatatat 476  Q
    ||||||||| ||||||||  | |||| |||||||||||||||| ||||||||||    |||||||||||||||||||||||||    
T  25109345 tggtgaggcgtacgttacggtttcttgtttagagggtaattaccctctcatgat----atcaaccaatcaaaatgtaatatat 25109423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 403 - 456
Target Start/End: Complemental strand, 4590075 - 4590021
Alignment:
Q  403 ctacgttaccctctcttatttagagggtaa-ttactctctcatgatatcaatcaa 456  Q
    |||||||||||||||||||||||||||||| |||  |||||||||||||||||||    
T  4590075 ctacgttaccctctcttatttagagggtaatttatcctctcatgatatcaatcaa 4590021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 393 - 475
Target Start/End: Original strand, 27782257 - 27782336
Alignment:
Q  393 ttggtgaggcctacgttaccctctcttatttagagggtaa-ttactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||| | ||| ||||||||||||| |||||||||||| |||| ||||||||||    ||||||||||||||||||||||||    
T  27782257 ttggtgacgtctatgttaccctctcttgtttagagggtaatttaccctctcatgat----atcaaccaatcaaaatgtaatata 27782336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 395 - 475
Target Start/End: Complemental strand, 11154895 - 11154818
Alignment:
Q  395 ggtgaggcctacgttaccctctcttatttagagggtaa-ttactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||| |||||||||||| ||||||||| ||||||| |||  ||||||||||    ||||||||||||||||||||||||    
T  11154895 ggtgagggctacgttaccctttcttatttaaagggtaatttagcctctcatgat----atcaaccaatcaaaatgtaatata 11154818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 394 - 475
Target Start/End: Complemental strand, 24178656 - 24178579
Alignment:
Q  394 tggtgaggcctacgttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||||  ||||||||||||| || ||||||||||||||| |||||||| ||    |||||| |||||||||||||||||    
T  24178656 tggtgaggtgtacgttaccctcttttgtttagagggtaattattctctcataat----atcaactaatcaaaatgtaatata 24178579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 395 - 475
Target Start/End: Original strand, 27438205 - 27438282
Alignment:
Q  395 ggtgaggcctacgttaccctctcttatttagagggtaattactc-tctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||| ||| ||||||||||||| ||||||||||||||  || |||||||||    ||||||||||||||||||||||||    
T  27438205 ggtgaggtctatgttaccctctcttgtttagagggtaatttatcttctcatgat----atcaaccaatcaaaatgtaatata 27438282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 408 - 476
Target Start/End: Original strand, 5686350 - 5686414
Alignment:
Q  408 ttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatatat 476  Q
    ||||||||| || ||||||||||| || ||||||||||||    |||||||||||||||||||||||||    
T  5686350 ttaccctcttttgtttagagggtattttctctctcatgat----atcaaccaatcaaaatgtaatatat 5686414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 408 - 475
Target Start/End: Complemental strand, 16922305 - 16922241
Alignment:
Q  408 ttaccctctcttatttagagggtaatt-actctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    |||||||||||||||||||||||| || || |||||||||||||||    |||||||||||||||||||    
T  16922305 ttaccctctcttatttagagggtattttaccctctcatgatatcaa----ccaatcaaaatgtaatata 16922241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 408 - 475
Target Start/End: Original strand, 17557585 - 17557649
Alignment:
Q  408 ttaccctctcttatttagagggta-attactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||||||||||||||||||||  |||| ||||||||||    ||||||||||||||||||||||||    
T  17557585 ttaccctctcttatttagagggtattttaccctctcatgat----atcaaccaatcaaaatgtaatata 17557649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 408 - 475
Target Start/End: Complemental strand, 14105995 - 14105931
Alignment:
Q  408 ttaccctctcttatttagagggta-attactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||||||||||||||||||||  |||| |||| |||||    ||||||||||||||||||||||||    
T  14105995 ttaccctctcttatttagagggtattttaccctcttatgat----atcaaccaatcaaaatgtaatata 14105931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 408 - 475
Target Start/End: Complemental strand, 27784482 - 27784418
Alignment:
Q  408 ttaccctctcttatttagagggta-attactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||||||||||||||||||||  |||| ||||||||||    |||||||||| |||||||||||||    
T  27784482 ttaccctctcttatttagagggtattttaccctctcatgat----atcaaccaataaaaatgtaatata 27784418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 408 - 475
Target Start/End: Complemental strand, 28581015 - 28580952
Alignment:
Q  408 ttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    |||||||||||| ||||||||||| |||  ||||||||||    || |||||||||||||||||||||    
T  28581015 ttaccctctcttgtttagagggtatttatcctctcatgat----ataaaccaatcaaaatgtaatata 28580952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 408 - 476
Target Start/End: Original strand, 4587874 - 4587939
Alignment:
Q  408 ttaccctctcttatttagagggta-attactctctcatgatatcaatcaaccaatcaaaatgtaatatat 476  Q
    ||||||||||||||||||||| ||  |||| ||||||||||    |||||||||| ||||||||||||||    
T  4587874 ttaccctctcttatttagaggatattttaccctctcatgat----atcaaccaattaaaatgtaatatat 4587939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 65 - 93
Target Start/End: Complemental strand, 13167153 - 13167125
Alignment:
Q  65 agaggactagactcaaataaataaataaa 93  Q
    |||||||||||||||||||||||||||||    
T  13167153 agaggactagactcaaataaataaataaa 13167125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 190; Significance: 1e-103; HSPs: 2)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 140 - 365
Target Start/End: Original strand, 55972 - 56197
Alignment:
Q  140 gctcgggctagcgtgagcgaccaacatagatctctcacagtgcaaattgaatggtgtccattagatatattattattaaatgctgcgttcaagatgtttt 239  Q
    |||| |||| ||||||||||||||||||| | |||||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  55972 gctcaggctcgcgtgagcgaccaacataggtttctcacggtgcaaattgattggtgtccattagatatattattattaaatgatgcgttcaagatgtttt 56071  T
Q  240 acttgaaaccttttgcaacagtgtttgttaggcattaaaaattctattaaaagtaacaggtcataaattcagataaatcatttgcaaaattagtgggttg 339  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  56072 acttgaaaccttttgcaacagtgtttgttaggcattaaaaattctattaaaagtatcaggtcataaattcatataaatcatttgcaaaattagtgggttg 56171  T
Q  340 gcacgtgttgcaaataaagacaaaaa 365  Q
    ||||||||||||||||||||||||||    
T  56172 gcacgtgttgcaaataaagacaaaaa 56197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 416 - 475
Target Start/End: Original strand, 56204 - 56263
Alignment:
Q  416 tcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  56204 tcttatttagaggataattaccctctcatgatatcaatcaaccaatcaaaatgtaatata 56263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 182; Significance: 3e-98; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 140 - 365
Target Start/End: Original strand, 35239225 - 35239449
Alignment:
Q  140 gctcgggctagcgtgagcgaccaacatagatctctcacagtgcaaattgaatggtgtccattagatatattattattaaatgctgcgttcaagatgtttt 239  Q
    |||||||||||||||||||| |||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  35239225 gctcgggctagcgtgagcgatcaacataggtctctcacagtgcaaactgattggtgtccattagatatattattattaaatgctgccttcaagatgtttt 35239324  T
Q  240 acttgaaaccttttgcaacagtgtttgttaggcattaaaaattctattaaaagtaacaggtcataaattcagataaatcatttgcaaaattagtgggttg 339  Q
    ||| ||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  35239325 actggaaac-ttttgcaacagtgtttattaggcattaaaaattctattaaaagtaacaggtcataaattctgataaatcatttgcaaaattagtgggttg 35239423  T
Q  340 gcacgtgttgcaaataaagacaaaaa 365  Q
    |||||||||||| |||||||||||||    
T  35239424 gcacgtgttgcagataaagacaaaaa 35239449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 395 - 475
Target Start/End: Original strand, 34401510 - 34401586
Alignment:
Q  395 ggtgaggcctacgttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||||||||||    ||||||||||||||||||||||||    
T  34401510 ggtgaggtctacgttaccctctcttgtttagagggtaattactctctcatgat----atcaaccaatcaaaatgtaatata 34401586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 395 - 475
Target Start/End: Original strand, 37270239 - 37270315
Alignment:
Q  395 ggtgaggcctacgttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||||||||||||||||||||| |||||||||||||||| || | |||||    ||||||||||||||||||||||||    
T  37270239 ggtgaggcctacgttaccctctcttgtttagagggtaattaccctattatgat----atcaaccaatcaaaatgtaatata 37270315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 390 - 476
Target Start/End: Complemental strand, 27020294 - 27020211
Alignment:
Q  390 aaattggtgaggcctacgttaccctctcttatttagagggtaa-ttactctctcatgatatcaatcaaccaatcaaaatgtaatatat 476  Q
    |||| |||||||||||| |||||||||||| |||||||||||| |||| ||||||||||    |||||||||||||||||||||||||    
T  27020294 aaataggtgaggcctacattaccctctcttgtttagagggtaatttaccctctcatgat----atcaaccaatcaaaatgtaatatat 27020211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 393 - 475
Target Start/End: Complemental strand, 42612466 - 42612387
Alignment:
Q  393 ttggtgaggcctacgttaccctctcttatttagagggtaa-ttactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||||||||||||||||||||||| |||||||||||| |||| ||||||| ||    ||||||||||||||||||||||||    
T  42612466 ttggtgaggcctacgttaccctctcttgtttagagggtaatttaccctctcataat----atcaaccaatcaaaatgtaatata 42612387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 395 - 475
Target Start/End: Complemental strand, 745809 - 745732
Alignment:
Q  395 ggtgaggcctacgttaccctctcttatttagagggtaa-ttactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||| ||||||||||||||||||| |||||||||||| |||| ||||||||||    ||||||||||||||||||||||||    
T  745809 ggtgaagcctacgttaccctctcttgtttagagggtaatttaccctctcatgat----atcaaccaatcaaaatgtaatata 745732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 395 - 475
Target Start/End: Complemental strand, 34663648 - 34663572
Alignment:
Q  395 ggtgaggcctacgttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||| |||||||||||||||||||||||  ||||||||| |||||||||||    |||||||||||||||||| ||||    
T  34663648 ggtgaggtctacgttaccctctcttatttaggaggtaattaccctctcatgata----tcaaccaatcaaaatgtagtata 34663572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 394 - 475
Target Start/End: Original strand, 12499212 - 12499290
Alignment:
Q  394 tggtgaggcctacgttaccctctcttatttagagggtaa-ttactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    |||||||||||| |||||||||| || |||||||||||| |||| ||||||||||    ||||||||||||||||||||||||    
T  12499212 tggtgaggcctatgttaccctcttttgtttagagggtaatttaccctctcatgat----atcaaccaatcaaaatgtaatata 12499290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 395 - 475
Target Start/End: Original strand, 9591605 - 9591682
Alignment:
Q  395 ggtgaggcctacgttaccctctcttatttagagggtaa-ttactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||| |||| |||||||||||| |||||||||||| |||| ||||||||||    ||||||||||||||||||||||||    
T  9591605 ggtgaggtctacattaccctctcttgtttagagggtaatttaccctctcatgat----atcaaccaatcaaaatgtaatata 9591682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 395 - 475
Target Start/End: Complemental strand, 37940197 - 37940120
Alignment:
Q  395 ggtgaggcctacgttaccctctcttatttagagggtaa-ttactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||| ||||||||| ||||||| |||||||||||| |||| ||||||||||    ||||||||||||||||||||||||    
T  37940197 ggtgaggtctacgttactctctcttgtttagagggtaatttaccctctcatgat----atcaaccaatcaaaatgtaatata 37940120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 395 - 475
Target Start/End: Complemental strand, 31552362 - 31552289
Alignment:
Q  395 ggtgaggcctacgttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||||||||||||||||||| | ||||||| |||||||| |||||||       ||||||||||||||||||||||||    
T  31552362 ggtgaggcctacgttaccctctcctgtttagagagtaattaccctctcat-------atcaaccaatcaaaatgtaatata 31552289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 393 - 475
Target Start/End: Original strand, 39588251 - 39588330
Alignment:
Q  393 ttggtgaggcctacgttaccctctcttatttagagggtaa-ttactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    |||||||||| |||||||||||||||| |||||||||||| |||  ||||||| ||    ||||||||||||||||||||||||    
T  39588251 ttggtgaggcttacgttaccctctcttgtttagagggtaatttatcctctcataat----atcaaccaatcaaaatgtaatata 39588330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 394 - 471
Target Start/End: Complemental strand, 7181287 - 7181213
Alignment:
Q  394 tggtgaggcctacgttaccctctctta-tttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaa 471  Q
    |||||||| ||||||||| |||||||  |||||||||||||||| |||||||||||    |||||||||||||||||||    
T  7181287 tggtgaggtctacgttacgctctctttgtttagagggtaattaccctctcatgata----tcaaccaatcaaaatgtaa 7181213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 395 - 475
Target Start/End: Original strand, 19664757 - 19664834
Alignment:
Q  395 ggtgaggcctacgttaccctctcttatttagagggtaa-ttactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    |||||||  ||||||||||||| || |||||||||||| |||| ||||||||||    ||||||||||||||||||||||||    
T  19664757 ggtgaggattacgttaccctctattgtttagagggtaatttaccctctcatgat----atcaaccaatcaaaatgtaatata 19664834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 408 - 475
Target Start/End: Original strand, 30128638 - 30128702
Alignment:
Q  408 ttaccctctcttatttagagggta-attactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||||||||||||||||||||  |||| ||||||||||    ||||||||||||||||||||||||    
T  30128638 ttaccctctcttatttagagggtattttacgctctcatgat----atcaaccaatcaaaatgtaatata 30128702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 408 - 475
Target Start/End: Original strand, 37938505 - 37938569
Alignment:
Q  408 ttaccctctcttatttagagggta-attactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||||||||||||||||||||  |||| ||||||||||    ||||||||||||||||||||||||    
T  37938505 ttaccctctcttatttagagggtattttaccctctcatgat----atcaaccaatcaaaatgtaatata 37938569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 408 - 475
Target Start/End: Complemental strand, 39590773 - 39590709
Alignment:
Q  408 ttaccctctcttatttagagggtaatt-actctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    |||||||||||||||||||||||| || || |||||||||||||||    |||||||||||||||||||    
T  39590773 ttaccctctcttatttagagggtattttaccctctcatgatatcaa----ccaatcaaaatgtaatata 39590709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 145 - 191
Target Start/End: Original strand, 13610035 - 13610081
Alignment:
Q  145 ggctagcgtgagcgaccaacatagatctctcacagtgcaaattgaat 191  Q
    ||||||||||||||||||| | || ||||||||||||||||||||||    
T  13610035 ggctagcgtgagcgaccaaaacaggtctctcacagtgcaaattgaat 13610081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 408 - 475
Target Start/End: Complemental strand, 15527476 - 15527413
Alignment:
Q  408 ttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    |||||||||||| ||||||||||| |||| |||| |||||    ||||||||||||||||||||||||    
T  15527476 ttaccctctcttgtttagagggtatttaccctcttatgat----atcaaccaatcaaaatgtaatata 15527413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 408 - 475
Target Start/End: Complemental strand, 19505104 - 19505041
Alignment:
Q  408 ttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    |||||||||||| ||||||||||| |||| ||||||||||||||||     |||||||||||||||||    
T  19505104 ttaccctctcttgtttagagggtatttaccctctcatgatatcaat----taatcaaaatgtaatata 19505041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 385 - 475
Target Start/End: Original strand, 34857933 - 34858019
Alignment:
Q  385 ataaaaaattggtgaggcctacgttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||| |||||||||||||| ||||||||| || ||||| | ||| |||| || ||| |||    ||||||||||||||||||||||||    
T  34857933 ataaaaagttggtgaggcctacattaccctcttttgtttagggagtatttaccctttcaagat----atcaaccaatcaaaatgtaatata 34858019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 408 - 475
Target Start/End: Original strand, 822831 - 822895
Alignment:
Q  408 ttaccctctcttatttagagggta-attactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||||||||||||||||||||  |||| |||||||||     ||||||||||||||||||||||||    
T  822831 ttaccctctcttatttagagggtattttaccctctcatga----catcaaccaatcaaaatgtaatata 822895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 408 - 475
Target Start/End: Complemental strand, 9593891 - 9593827
Alignment:
Q  408 ttaccctctcttatttagagggta-attactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||||||||||||||||||||  |||| ||||||||||    |||||||||||||||| |||||||    
T  9593891 ttaccctctcttatttagagggtattttaccctctcatgat----atcaaccaatcaaaatataatata 9593827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 408 - 475
Target Start/End: Complemental strand, 12501465 - 12501401
Alignment:
Q  408 ttaccctctcttatttagagggtaatt-actctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    |||||||||||||||||||||||| || || ||||||||||||||     |||||||||||||||||||    
T  12501465 ttaccctctcttatttagagggtattttaccctctcatgatatcag----ccaatcaaaatgtaatata 12501401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 395 - 475
Target Start/End: Complemental strand, 13305673 - 13305597
Alignment:
Q  395 ggtgaggcctacgttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    |||||||||||  ||||||||| || |||||||| |||||||  || |||||||    |||||||||||||||||||||||    
T  13305673 ggtgaggcctatattaccctcttttgtttagaggataattaccttcccatgata----tcaaccaatcaaaatgtaatata 13305597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 408 - 475
Target Start/End: Original strand, 7179672 - 7179735
Alignment:
Q  408 ttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    |||||||||||| ||||||||||| |||| |  |||||||    ||||||||||||||||||||||||    
T  7179672 ttaccctctcttgtttagagggtatttaccccttcatgat----atcaaccaatcaaaatgtaatata 7179735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 408 - 475
Target Start/End: Original strand, 9985372 - 9985435
Alignment:
Q  408 ttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    |||||||||||| ||||||||||| ||||||  |||||||    |||||| |||||||||||||||||    
T  9985372 ttaccctctcttgtttagagggtatttactcattcatgat----atcaactaatcaaaatgtaatata 9985435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 395 - 452
Target Start/End: Original strand, 11076789 - 11076847
Alignment:
Q  395 ggtgaggcctacgttaccctctcttattta-gagggtaattactctctcatgatatcaa 452  Q
    ||||||| ||||||||||||||||| |||| | ||||||||||  ||||||||||||||    
T  11076789 ggtgaggtctacgttaccctctcttgtttaggggggtaattaccttctcatgatatcaa 11076847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 414 - 475
Target Start/End: Original strand, 42609923 - 42609981
Alignment:
Q  414 tctcttatttagagggtaatt-actctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    |||||||||||||||||| || || ||||||||||||||    ||||||||||||||||||||    
T  42609923 tctcttatttagagggtattttaccctctcatgatatca----accaatcaaaatgtaatata 42609981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 395 - 475
Target Start/End: Complemental strand, 20546399 - 20546322
Alignment:
Q  395 ggtgaggcctacgttaccctctcttatttagagggtaatt-actctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    |||||| ||||  ||||||||| || |||||||||||||| || |||||||||||||||    ||||||||||||| |||||    
T  20546399 ggtgagacctatattaccctcttttgtttagagggtaatttacactctcatgatatcaa----ccaatcaaaatgttatata 20546322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 5e-23; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 395 - 475
Target Start/End: Complemental strand, 38577264 - 38577188
Alignment:
Q  395 ggtgaggcctacgttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||    ||||||| |||||||||||||||    
T  38577264 ggtgaggcctacgttaccctcttttatttagagggtaattactctctcatgata----tcaaccattcaaaatgtaatata 38577188  T

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Target: chr8; HSP #2
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 391 - 475
Target Start/End: Original strand, 27911877 - 27911958
Alignment:
Q  391 aattggtgaggcctacgttaccctctcttatttagagggtaa-ttactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||||||| ||||||||||||||||| |||||||||||| |||| ||||||||||    ||||||||||||||||||||||||    
T  27911877 aattggtgaggactacgttaccctctcttgtttagagggtaatttaccctctcatgat----atcaaccaatcaaaatgtaatata 27911958  T

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Target: chr8; HSP #3
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 391 - 475
Target Start/End: Original strand, 27958296 - 27958377
Alignment:
Q  391 aattggtgaggcctacgttaccctctcttatttagagggtaa-ttactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||||||| ||||||||||||||||| |||||||||||| |||| ||||||||||    ||||||||||||||||||||||||    
T  27958296 aattggtgaggactacgttaccctctcttgtttagagggtaatttaccctctcatgat----atcaaccaatcaaaatgtaatata 27958377  T

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Target: chr8; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 395 - 475
Target Start/End: Original strand, 3846499 - 3846575
Alignment:
Q  395 ggtgaggcctacgttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||||||||||||| ||||||| |||||||||||||||| ||||||||||    || |||||||||||||||||||||    
T  3846499 ggtgaggcctacgttacactctcttgtttagagggtaattaccctctcatgat----ataaaccaatcaaaatgtaatata 3846575  T

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Target: chr8; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 395 - 475
Target Start/End: Original strand, 6093182 - 6093258
Alignment:
Q  395 ggtgaggcctacgttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    |||||| |||||||||||||||||| ||||||||||||||||| | |||||||||||||    ||||||||||||||||||    
T  6093182 ggtgagacctacgttaccctctcttgtttagagggtaattactttatcatgatatcaat----caatcaaaatgtaatata 6093258  T

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Target: chr8; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 395 - 475
Target Start/End: Complemental strand, 45409362 - 45409286
Alignment:
Q  395 ggtgaggcctacgttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    |||||||| |||||||| |||||||||||| ||||||||||| |||||||||||    |||||||||||||||||||||||    
T  45409362 ggtgaggcatacgttacactctcttatttatagggtaattaccctctcatgata----tcaaccaatcaaaatgtaatata 45409286  T

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Target: chr8; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 397 - 475
Target Start/End: Complemental strand, 17853493 - 17853418
Alignment:
Q  397 tgaggcctacgttaccctctcttatttagagggtaa-ttactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||| ||||||||||||||||| |||||||||||| |||||||||||||||    ||||||||||||||||||||||||    
T  17853493 tgaggtctacgttaccctctcttgtttagagggtaatttactctctcatgat----atcaaccaatcaaaatgtaatata 17853418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 395 - 475
Target Start/End: Complemental strand, 25583825 - 25583748
Alignment:
Q  395 ggtgaggcctacgttaccctctcttatttagagggtaa-ttactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||||||| ||||||||||||| |||||||||||| |||| ||||||||||    ||||||||||||||||||||||||    
T  25583825 ggtgaggcctatgttaccctctcttgtttagagggtaatttaccctctcatgat----atcaaccaatcaaaatgtaatata 25583748  T

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Target: chr8; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 393 - 476
Target Start/End: Original strand, 44255951 - 44256031
Alignment:
Q  393 ttggtgaggcctacgttaccctctcttatttagagggtaa-ttactctctcatgatatcaatcaaccaatcaaaatgtaatatat 476  Q
    ||||||||||||| |||||||||||||||||||||| ||| |||| ||||||||||    |||||||||| ||||||||||||||    
T  44255951 ttggtgaggcctaggttaccctctcttatttagaggataatttaccctctcatgat----atcaaccaattaaaatgtaatatat 44256031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 389 - 475
Target Start/End: Complemental strand, 15883642 - 15883559
Alignment:
Q  389 aaaattggtgaggcctacgttaccctctcttatttagagggtaa-ttactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||| ||||||||||||||||| ||||||| |||||||||||| |||  ||||||||||||||||    ||||||||||||||||||    
T  15883642 aaaatgggtgaggcctacgttactctctcttgtttagagggtaatttatcctctcatgatatcaat----caatcaaaatgtaatata 15883559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 408 - 475
Target Start/End: Original strand, 38576599 - 38576662
Alignment:
Q  408 ttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    |||||||||||| ||||||||||| |||| ||||||||||    ||||||||||||||||||||||||    
T  38576599 ttaccctctcttgtttagagggtatttaccctctcatgat----atcaaccaatcaaaatgtaatata 38576662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 408 - 475
Target Start/End: Complemental strand, 39860003 - 39859940
Alignment:
Q  408 ttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    |||||||||||| ||||||||||| |||| |||||||||||    |||||||||||||||||||||||    
T  39860003 ttaccctctcttgtttagagggtatttaccctctcatgata----tcaaccaatcaaaatgtaatata 39859940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 395 - 476
Target Start/End: Original strand, 276577 - 276655
Alignment:
Q  395 ggtgaggcctacgttaccctctcttatttagagggtaatt-actctctcatgatatcaatcaaccaatcaaaatgtaatatat 476  Q
    |||||| ||||| |||||||||||| |||| ||||||||| || ||||||||||||||    |||||||||||||||||||||    
T  276577 ggtgagacctacattaccctctcttgtttatagggtaatttaccctctcatgatatca----accaatcaaaatgtaatatat 276655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 395 - 476
Target Start/End: Complemental strand, 639272 - 639194
Alignment:
Q  395 ggtgaggcctacgttaccctctcttatttagagggtaatt-actctctcatgatatcaatcaaccaatcaaaatgtaatatat 476  Q
    |||||| ||||| |||||||||||| |||| ||||||||| || |||||||||||||||    ||||||||||||||||||||    
T  639272 ggtgagacctacattaccctctcttgtttatagggtaatttaccctctcatgatatcaa----ccaatcaaaatgtaatatat 639194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 395 - 476
Target Start/End: Complemental strand, 825078 - 825000
Alignment:
Q  395 ggtgaggcctacgttaccctctcttatttagagggtaatt-actctctcatgatatcaatcaaccaatcaaaatgtaatatat 476  Q
    |||||| ||||| |||||||||||| |||| ||||||||| || |||||||||||||||    ||||||||||||||||||||    
T  825078 ggtgagacctacattaccctctcttgtttatagggtaatttaccctctcatgatatcaa----ccaatcaaaatgtaatatat 825000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 402 - 476
Target Start/End: Original strand, 41544843 - 41544913
Alignment:
Q  402 cctacgttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatatat 476  Q
    ||||||||||||| |||| |||||| ||||||||  ||||||||||    |||||||||||||||||||||||||    
T  41544843 cctacgttaccctatcttgtttagatggtaattatcctctcatgat----atcaaccaatcaaaatgtaatatat 41544913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 399 - 475
Target Start/End: Complemental strand, 4622959 - 4622886
Alignment:
Q  399 aggcctacgttaccctctcttatttagagggtaa-ttactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    |||||||| |||||||||||| |||||||||||| |||| |||| |||||    ||||||||||||||||||||||||    
T  4622959 aggcctacattaccctctcttgtttagagggtaatttaccctcttatgat----atcaaccaatcaaaatgtaatata 4622886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 394 - 456
Target Start/End: Complemental strand, 2082494 - 2082431
Alignment:
Q  394 tggtgaggcctacgttaccctctcttatttagagggtaa-ttactctctcatgatatcaatcaa 456  Q
    |||||||||||||||||| ||||||| | ||||| |||| |||| |||||||||||||||||||    
T  2082494 tggtgaggcctacgttacgctctcttgtatagagagtaatttaccctctcatgatatcaatcaa 2082431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 408 - 475
Target Start/End: Original strand, 3703181 - 3703245
Alignment:
Q  408 ttaccctctcttatttagagggta-attactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||    ||||||||||||||||||    
T  3703181 ttaccctctcttatttagagggtattttaccctctcatgatatcaat----caatcaaaatgtaatata 3703245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 408 - 475
Target Start/End: Complemental strand, 16097669 - 16097605
Alignment:
Q  408 ttaccctctcttatttagagggtaatt-actctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    |||||||||||||||||||||||| || || |||||||||||||||    |||||||||||||||||||    
T  16097669 ttaccctctcttatttagagggtattttaccctctcatgatatcaa----ccaatcaaaatgtaatata 16097605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 408 - 475
Target Start/End: Complemental strand, 18957461 - 18957397
Alignment:
Q  408 ttaccctctcttatttagagggta-attactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||    ||||||||||||||||||    
T  18957461 ttaccctctcttatttagagggtattttaccctctcatgatatcaat----caatcaaaatgtaatata 18957397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 408 - 475
Target Start/End: Original strand, 26965377 - 26965441
Alignment:
Q  408 ttaccctctcttatttagagggta-attactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||||||||||||||||||||  |||| ||||||||||    ||||||||||||||||||||||||    
T  26965377 ttaccctctcttatttagagggtattttaccctctcatgat----atcaaccaatcaaaatgtaatata 26965441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 408 - 475
Target Start/End: Complemental strand, 6096887 - 6096824
Alignment:
Q  408 ttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||||||||||||||||| || |||| ||||||| ||    ||||||||||||||||||||||||    
T  6096887 ttaccctctcttatttagaggatatttaccctctcataat----atcaaccaatcaaaatgtaatata 6096824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 408 - 474
Target Start/End: Original strand, 17852402 - 17852465
Alignment:
Q  408 ttaccctctcttatttagagggtaatt-actctctcatgatatcaatcaaccaatcaaaatgtaatat 474  Q
    |||||||||| ||||||||||||| || |||||||||||||||||    |||||||||||||||||||    
T  17852402 ttaccctctcatatttagagggtattttactctctcatgatatca----accaatcaaaatgtaatat 17852465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 413 - 475
Target Start/End: Original strand, 40302432 - 40302490
Alignment:
Q  413 ctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||| ||||||||||| |||| ||||||||||    ||||||||||||||||||||||||    
T  40302432 ctctcttgtttagagggtatttaccctctcatgat----atcaaccaatcaaaatgtaatata 40302490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 408 - 476
Target Start/End: Original strand, 17946596 - 17946661
Alignment:
Q  408 ttaccctctcttatttagagggta-attactctctcatgatatcaatcaaccaatcaaaatgtaatatat 476  Q
    ||||||||||||||||||||||||  |||| ||||||||||    |||||||||| ||||||||||||||    
T  17946596 ttaccctctcttatttagagggtattttaccctctcatgat----atcaaccaattaaaatgtaatatat 17946661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 396 - 452
Target Start/End: Complemental strand, 18089583 - 18089527
Alignment:
Q  396 gtgaggcctacgttaccctctcttatttagagggtaattactctctcatgatatcaa 452  Q
    ||||||||||||||||| |||  | |||||||||||||||| || ||||||||||||    
T  18089583 gtgaggcctacgttaccatcttctgtttagagggtaattaccctttcatgatatcaa 18089527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 408 - 475
Target Start/End: Complemental strand, 278788 - 278724
Alignment:
Q  408 ttaccctctcttatttagagggtaatt-actctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    |||||||||| ||||||||||||| || || |||||||||||||||    |||||||||||||||||||    
T  278788 ttaccctctcatatttagagggtattttaccctctcatgatatcaa----ccaatcaaaatgtaatata 278724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 408 - 475
Target Start/End: Original strand, 637064 - 637128
Alignment:
Q  408 ttaccctctcttatttagagggtaatt-actctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    |||||||||| ||||||||||||| || || ||||||||||||||    ||||||||||||||||||||    
T  637064 ttaccctctcatatttagagggtattttaccctctcatgatatca----accaatcaaaatgtaatata 637128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 408 - 475
Target Start/End: Original strand, 822867 - 822931
Alignment:
Q  408 ttaccctctcttatttagagggtaatt-actctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    |||||||||| ||||||||||||| || || ||||||||||||||    ||||||||||||||||||||    
T  822867 ttaccctctcatatttagagggtattttaccctctcatgatatca----accaatcaaaatgtaatata 822931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 408 - 475
Target Start/End: Original strand, 4621495 - 4621559
Alignment:
Q  408 ttaccctctcttatttagagggtaatt-actctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||| |||||||||||||||| || || ||||||||||||||    ||||||||||||||||||||    
T  4621495 ttaccctatcttatttagagggtattttaccctctcatgatatca----accaatcaaaatgtaatata 4621559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 408 - 475
Target Start/End: Original strand, 23345184 - 23345248
Alignment:
Q  408 ttaccctctcttatttagagggta-attactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||||||||||||||||||||  |||  ||||||||||    ||||||||||||||||||||||||    
T  23345184 ttaccctctcttatttagagggtattttatcctctcatgat----atcaaccaatcaaaatgtaatata 23345248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 408 - 475
Target Start/End: Original strand, 38059256 - 38059320
Alignment:
Q  408 ttaccctctcttatttagagggta-attactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||||||||||||||||||||  |||| ||||||||||    |||||||||||||||| |||||||    
T  38059256 ttaccctctcttatttagagggtattttaccctctcatgat----atcaaccaatcaaaatataatata 38059320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 390 - 475
Target Start/End: Complemental strand, 38060990 - 38060908
Alignment:
Q  390 aaattggtgaggcctacgttaccctctcttatttagagggtaatt-actctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    |||| |||||| ||||||||||  | |||| |||||||||||||| || |||| ||||||||||    |||||||||||||||||||    
T  38060990 aaataggtgagacctacgttactatatcttgtttagagggtaatttaccctcttatgatatcaa----ccaatcaaaatgtaatata 38060908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 395 - 475
Target Start/End: Complemental strand, 17948717 - 17948640
Alignment:
Q  395 ggtgaggcctacgttaccctctcttatttagagggtaa-ttactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    |||||||  ||| |||||||||||| |||||||||||| |||  ||||||||||    |||||||||| |||||||||||||    
T  17948717 ggtgaggtttacattaccctctcttgtttagagggtaatttatcctctcatgat----atcaaccaattaaaatgtaatata 17948640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 395 - 475
Target Start/End: Original strand, 18955093 - 18955170
Alignment:
Q  395 ggtgaggcctacgttaccctctcttatttagagggtaa-ttactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||||||| ||||| |||||||  ||||||||||| |||  ||||||||||    ||||||||||||||||||| ||||    
T  18955093 ggtgaggcctaagttacactctcttgcttagagggtaatttatcctctcatgat----atcaaccaatcaaaatgtactata 18955170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 2e-22; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 392 - 475
Target Start/End: Complemental strand, 9663773 - 9663694
Alignment:
Q  392 attggtgaggcctacgttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||||||||||  |||||||||||| ||||||||||||||||||||||||||||    |||||||||||||||||||||||    
T  9663773 attggtgaggcctatattaccctctcttgtttagagggtaattactctctcatgata----tcaaccaatcaaaatgtaatata 9663694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 397 - 475
Target Start/End: Complemental strand, 17968477 - 17968403
Alignment:
Q  397 tgaggcctacgttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    |||||||||||||| ||||||||||||||||||||||||| |||| |||||    ||||||||||||||||||||||||    
T  17968477 tgaggcctacgttatcctctcttatttagagggtaattacgctcttatgat----atcaaccaatcaaaatgtaatata 17968403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 395 - 475
Target Start/End: Complemental strand, 725705 - 725628
Alignment:
Q  395 ggtgaggcctacgttaccctctcttatttagagggtaa-ttactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||||||||||||||||||||| |||||||||||| |||| ||||||||||    |||||||||||||||| |||||||    
T  725705 ggtgaggcctacgttaccctctcttgtttagagggtaatttaccctctcatgat----atcaaccaatcaaaatataatata 725628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 395 - 475
Target Start/End: Complemental strand, 44459475 - 44459398
Alignment:
Q  395 ggtgaggcctacgttaccctctcttatttagagggtaa-ttactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||||||||||||||||||||| |||||||||||| |||| ||||||| ||    ||||||||||||||||||||||||    
T  44459475 ggtgaggcctacgttaccctctcttgtttagagggtaatttaccctctcataat----atcaaccaatcaaaatgtaatata 44459398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 393 - 476
Target Start/End: Original strand, 4859569 - 4859649
Alignment:
Q  393 ttggtgaggcctacgttaccctctcttatttagagggtaa-ttactctctcatgatatcaatcaaccaatcaaaatgtaatatat 476  Q
    ||||||||||||| ||||||||||||| |||||||||||| |||| ||||||| ||    |||||||||||||||||||||||||    
T  4859569 ttggtgaggcctatgttaccctctcttgtttagagggtaatttaccctctcatcat----atcaaccaatcaaaatgtaatatat 4859649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 395 - 475
Target Start/End: Complemental strand, 48607795 - 48607720
Alignment:
Q  395 ggtgaggcctacgttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    |||||||||||||||||||||| || |||||| ||||||||||||||||||||    ||||||||||||||||| ||||||    
T  48607795 ggtgaggcctacgttaccctcttttgtttaga-ggtaattactctctcatgat----atcaaccaatcaaaatgcaatata 48607720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 397 - 475
Target Start/End: Original strand, 20119874 - 20119949
Alignment:
Q  397 tgaggcctacgttaccctctcttatttagagggtaa-ttactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||| ||||||||||||||||| |||||||||||| |||| ||||||||||    ||||||||||||||||||||||||    
T  20119874 tgaggtctacgttaccctctcttgtttagagggtaatttaccctctcatgat----atcaaccaatcaaaatgtaatata 20119949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 395 - 475
Target Start/End: Complemental strand, 16277745 - 16277668
Alignment:
Q  395 ggtgaggcctacgttaccctctcttatttagagggtaa-ttactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||| ||||||||||| ||||||| |||||||||||| |||| ||||||||||    ||||||||||||||||||||||||    
T  16277745 ggtgaagcctacgttactctctcttgtttagagggtaatttaccctctcatgat----atcaaccaatcaaaatgtaatata 16277668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 394 - 475
Target Start/End: Complemental strand, 33246821 - 33246744
Alignment:
Q  394 tggtgaggcctacgttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||||| ||| |||||||||||| ||||||||  | ||||||||||||||||    |||||||||||||||||||||||    
T  33246821 tggtgaggcttacattaccctctcttgtttagaggtaatttactctctcatgata----tcaaccaatcaaaatgtaatata 33246744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 408 - 476
Target Start/End: Original strand, 40013634 - 40013699
Alignment:
Q  408 ttaccctctcttatttagagggtaatt-actctctcatgatatcaatcaaccaatcaaaatgtaatatat 476  Q
    |||||||||||||||||||||||| || |||||||||||||||||    |||||||||||||||||||||    
T  40013634 ttaccctctcttatttagagggtattttactctctcatgatatca----accaatcaaaatgtaatatat 40013699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 408 - 475
Target Start/End: Complemental strand, 4861969 - 4861905
Alignment:
Q  408 ttaccctctcttatttagagggtaatt-actctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    |||||||||||||||||||||||| || ||||||||||||||||||    |||||||||||||||||||    
T  4861969 ttaccctctcttatttagagggtattttactctctcatgatatcaa----ccaatcaaaatgtaatata 4861905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 393 - 456
Target Start/End: Complemental strand, 41289741 - 41289679
Alignment:
Q  393 ttggtgaggcctacgttaccctctcttatttagagggtaattactctctcatgatatcaatcaa 456  Q
    |||||||||||||||||| |||||||| ||||| |||||||||| |||||||| ||||||||||    
T  41289741 ttggtgaggcctacgttatcctctcttgtttag-gggtaattaccctctcatgttatcaatcaa 41289679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 408 - 475
Target Start/End: Original strand, 17286338 - 17286401
Alignment:
Q  408 ttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    |||||||||||| ||||||||||| |||| ||||||||||||||||    ||||||||||||||||||    
T  17286338 ttaccctctcttgtttagagggtatttaccctctcatgatatcaat----caatcaaaatgtaatata 17286401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 395 - 435
Target Start/End: Complemental strand, 5374655 - 5374615
Alignment:
Q  395 ggtgaggcctacgttaccctctcttatttagagggtaatta 435  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  5374655 ggtgaggcctacgttaccctctcttgtttagagggtaatta 5374615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 390 - 452
Target Start/End: Complemental strand, 8393501 - 8393441
Alignment:
Q  390 aaattggtgaggcctacgttaccctctcttatttagagggtaattactctctcatgatatcaa 452  Q
    |||| ||| ||| ||||||||||||||||||||||   |||||||||||||||||||||||||    
T  8393501 aaataggtcaggtctacgttaccctctcttatttaa--ggtaattactctctcatgatatcaa 8393441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 408 - 475
Target Start/End: Original strand, 16273921 - 16273985
Alignment:
Q  408 ttaccctctcttatttagagggta-attactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||||||||||||||||||||  |||| ||||||||||    ||||||||||||||||||||||||    
T  16273921 ttaccctctcttatttagagggtattttaccctctcatgat----atcaaccaatcaaaatgtaatata 16273985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 408 - 475
Target Start/End: Original strand, 44456908 - 44456972
Alignment:
Q  408 ttaccctctcttatttagagggta-attactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||||||||||||||||||||  |||| ||||||||||    ||||||||||||||||||||||||    
T  44456908 ttaccctctcttatttagagggtattttaccctctcatgat----atcaaccaatcaaaatgtaatata 44456972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 408 - 475
Target Start/End: Original strand, 23592551 - 23592614
Alignment:
Q  408 ttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    |||||||||||||||||||||||| |||  || |||||||||||||    ||||||||||||||||||    
T  23592551 ttaccctctcttatttagagggtatttatcctttcatgatatcaat----caatcaaaatgtaatata 23592614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 395 - 476
Target Start/End: Complemental strand, 40015856 - 40015778
Alignment:
Q  395 ggtgaggcctacgttaccctctcttatttagagggtaatt-actctctcatgatatcaatcaaccaatcaaaatgtaatatat 476  Q
    ||||| ||||| |||||| ||| || |||||||||||||| || |||||||||||||||||||    ||||||||||||||||    
T  40015856 ggtgaagcctaggttaccttcttttgtttagagggtaatttaccctctcatgatatcaatcaa----tcaaaatgtaatatat 40015778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 410 - 476
Target Start/End: Original strand, 41287568 - 41287630
Alignment:
Q  410 accctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatatat 476  Q
    |||||||||| ||||||||||| |||| ||||||||||    |||||| ||||||||||||||||||    
T  41287568 accctctcttgtttagagggtatttaccctctcatgat----atcaactaatcaaaatgtaatatat 41287630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 396 - 452
Target Start/End: Complemental strand, 41858724 - 41858667
Alignment:
Q  396 gtgaggcctacgttaccctctcttatttagagggtaa-ttactctctcatgatatcaa 452  Q
    ||||| |||| ||||||||||||| |||||||||||| |||| |||||||||||||||    
T  41858724 gtgagacctatgttaccctctcttgtttagagggtaatttaccctctcatgatatcaa 41858667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 440 - 476
Target Start/End: Complemental strand, 241587 - 241551
Alignment:
Q  440 ctcatgatatcaatcaaccaatcaaaatgtaatatat 476  Q
    ||||||||||||| |||||||||||||||||||||||    
T  241587 ctcatgatatcaaccaaccaatcaaaatgtaatatat 241551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 395 - 475
Target Start/End: Original strand, 41336117 - 41336194
Alignment:
Q  395 ggtgaggcctacgttaccctctcttatttagagggtaa-ttactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||| |||  |||||||||||| |||||||||||| |||  ||||||||||||||||    ||||||||||||||||||    
T  41336117 ggtgaggtctatcttaccctctcttgtttagagggtaatttatcctctcatgatatcaat----caatcaaaatgtaatata 41336194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 411 - 475
Target Start/End: Original strand, 47906961 - 47907022
Alignment:
Q  411 ccctctcttatttagagggtaatt-actctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||||||||||||||||| || || ||||||||||||||    ||||||||||||||||||||    
T  47906961 ccctctcttatttagagggtattttaccctctcatgatatca----accaatcaaaatgtaatata 47907022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 391 - 475
Target Start/End: Complemental strand, 23594708 - 23594629
Alignment:
Q  391 aattggtgaggcctacgttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||||||| |||||||||||| |||| |||||| |||||||   |||| |||||    ||||||||||||||||||||||||    
T  23594708 aattggtgaggtctacgttaccctatcttgtttaga-ggtaattgtcctcttatgat----atcaaccaatcaaaatgtaatata 23594629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 408 - 475
Target Start/End: Original strand, 38179672 - 38179736
Alignment:
Q  408 ttaccctctcttatttagagggta-attactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||||||||||||||||||||  |||| ||||||||||    ||||||||||||||| ||||||||    
T  38179672 ttaccctctcttatttagagggtattttaccctctcatgat----atcaaccaatcaaaacgtaatata 38179736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 408 - 475
Target Start/End: Complemental strand, 41338339 - 41338275
Alignment:
Q  408 ttaccctctcttatttagagggta-attactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||||||||||||||||||||  ||||  |||||||||    ||||||||||||||||||||||||    
T  41338339 ttaccctctcttatttagagggtattttaccttctcatgat----atcaaccaatcaaaatgtaatata 41338275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 411 - 475
Target Start/End: Original strand, 48605704 - 48605763
Alignment:
Q  411 ccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||||| |||||||  ||||||||||||||||||||||    ||||||||||||||||||||    
T  48605704 ccctctcttgtttagaga-taattactctctcatgatatca----accaatcaaaatgtaatata 48605763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 408 - 475
Target Start/End: Original strand, 9659022 - 9659085
Alignment:
Q  408 ttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||| |||| ||||||||||| |||| ||||||||||    || |||||||||||||||||||||    
T  9659022 ttaccctatcttgtttagagggtatttaccctctcatgat----ataaaccaatcaaaatgtaatata 9659085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 408 - 475
Target Start/End: Complemental strand, 21737501 - 21737439
Alignment:
Q  408 ttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    |||||||||||||||||| | ||| |||| |||||||||||||||    |||||||||||||||||||    
T  21737501 ttaccctctcttatttag-gtgtatttaccctctcatgatatcaa----ccaatcaaaatgtaatata 21737439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 404 - 475
Target Start/End: Original strand, 48683073 - 48683140
Alignment:
Q  404 tacgttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    |||||||||||||||| |||||||||||||||| || | || ||    |||||||||| |||||||||||||    
T  48683073 tacgttaccctctcttgtttagagggtaattacccttttattat----atcaaccaattaaaatgtaatata 48683140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 408 - 475
Target Start/End: Complemental strand, 48684634 - 48684571
Alignment:
Q  408 ttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||||||||||||||||| || |||| || | |||||    ||||||||||||||||||||||||    
T  48684634 ttaccctctcttatttagaggatatttacccttttatgat----atcaaccaatcaaaatgtaatata 48684571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 452
Target Start/End: Original strand, 723497 - 723542
Alignment:
Q  408 ttaccctctcttatttagagggta-attactctctcatgatatcaa 452  Q
    ||||||||||||||||||||||||  |||| |||||||||||||||    
T  723497 ttaccctctcttatttagagggtattttaccctctcatgatatcaa 723542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 410 - 475
Target Start/End: Complemental strand, 37708426 - 37708365
Alignment:
Q  410 accctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    |||||||||| ||||||||||| ||||||| | | |||    ||||||||||||||||||||||||    
T  37708426 accctctcttgtttagagggtatttactcttttaagat----atcaaccaatcaaaatgtaatata 37708365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 395 - 475
Target Start/End: Complemental strand, 38229843 - 38229769
Alignment:
Q  395 ggtgaggcctacgttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    |||||||||||  ||||| |||||| ||||||||||| |||| || ||| ||||||||    |||||||||||||||||||    
T  38229843 ggtgaggccta--ttaccatctcttgtttagagggtatttaccctttcaagatatcaa----ccaatcaaaatgtaatata 38229769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 145 - 189
Target Start/End: Original strand, 38644981 - 38645025
Alignment:
Q  145 ggctagcgtgagcgaccaacatagatctctcacagtgcaaattga 189  Q
    ||||||||||||||||||| | || |||||||| |||||||||||    
T  38644981 ggctagcgtgagcgaccaaaacaggtctctcacggtgcaaattga 38645025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 476
Target Start/End: Original strand, 46553450 - 46553511
Alignment:
Q  412 cctctcttatttagagggtaatt-actctctcatgatatcaatcaaccaatcaaaatgtaatatat 476  Q
    ||||| |||||||||||||| || || ||||||||||||||    |||||||||||||||||||||    
T  46553450 cctcttttatttagagggtattttaccctctcatgatatca----accaatcaaaatgtaatatat 46553511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 395 - 475
Target Start/End: Complemental strand, 46555663 - 46555586
Alignment:
Q  395 ggtgaggcctacgttaccctctcttatttagagggtaa-ttactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||| || |||||||||||||||| |||||||||||| |||  ||||||| ||    |||||||||||||||| |||||||    
T  46555663 ggtgaagcttacgttaccctctcttgtttagagggtaatttatcctctcataat----atcaaccaatcaaaatataatata 46555586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 2e-22; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 392 - 475
Target Start/End: Complemental strand, 13534797 - 13534718
Alignment:
Q  392 attggtgaggcctacgttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||||||||||  |||||||||||| ||||||||||||||||||||||||||||    |||||||||||||||||||||||    
T  13534797 attggtgaggcctatattaccctctcttgtttagagggtaattactctctcatgata----tcaaccaatcaaaatgtaatata 13534718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 391 - 475
Target Start/End: Original strand, 16664478 - 16664558
Alignment:
Q  391 aattggtgaggcctacgttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||    ||||||||||||||||| ||||||    
T  16664478 aattggtgaggcctacgttaccctctcttgtttagaggataattaccctctcatgat----atcaaccaatcaaaatgaaatata 16664558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 395 - 475
Target Start/End: Complemental strand, 31292831 - 31292755
Alignment:
Q  395 ggtgaggcctacgttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    |||||| |||||||||||||||||| |||||||||||||||| |||||||||||    |||||||||||||||||||||||    
T  31292831 ggtgagacctacgttaccctctcttgtttagagggtaattaccctctcatgata----tcaaccaatcaaaatgtaatata 31292755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 396 - 475
Target Start/End: Original strand, 34072854 - 34072929
Alignment:
Q  396 gtgaggcctacgttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    |||||| ||||||||||||||||| |||||||||||||||| ||||||||||    ||||||||||||||||||||||||    
T  34072854 gtgaggtctacgttaccctctcttgtttagagggtaattaccctctcatgat----atcaaccaatcaaaatgtaatata 34072929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 397 - 475
Target Start/End: Original strand, 49873550 - 49873624
Alignment:
Q  397 tgaggcctacgttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    |||||| |||||||||||||||| |||||| ||||||||||||||||||||    ||||||||||||||||||||||||    
T  49873550 tgaggcttacgttaccctctcttttttagatggtaattactctctcatgat----atcaaccaatcaaaatgtaatata 49873624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 395 - 476
Target Start/End: Complemental strand, 17520160 - 17520083
Alignment:
Q  395 ggtgaggcctacgttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatatat 476  Q
    ||||||| ||||||||||||||||| |||||||||||||||  ||||||||||||||||    |||||||||||||||||||    
T  17520160 ggtgaggtctacgttaccctctcttgtttagagggtaattatcctctcatgatatcaat----caatcaaaatgtaatatat 17520083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 395 - 475
Target Start/End: Complemental strand, 20354305 - 20354229
Alignment:
Q  395 ggtgaggcctacgttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||||||||||||||||||||| ||||||||||||||   |||||||||||    |||||||||||||||||||||||    
T  20354305 ggtgaggcctacgttaccctctcttgtttagagggtaatttacctctcatgata----tcaaccaatcaaaatgtaatata 20354229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 395 - 475
Target Start/End: Complemental strand, 50496360 - 50496284
Alignment:
Q  395 ggtgaggcctacgttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||||||||||||||||||||| ||||| |||||||||| |||| |||||    ||||||||||||||||||||||||    
T  50496360 ggtgaggcctacgttaccctctcttgtttagggggtaattaccctctaatgat----atcaaccaatcaaaatgtaatata 50496284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 394 - 475
Target Start/End: Complemental strand, 41041674 - 41041596
Alignment:
Q  394 tggtgaggcctacgttaccctctcttatttagagggtaa-ttactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||||||||| |||||||||||| |||||||||||| |||| ||||||||||    ||||||||||||||||||||||||    
T  41041674 tggtgaggcctacattaccctctcttgtttagagggtaatttaccctctcatgat----atcaaccaatcaaaatgtaatata 41041596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 395 - 475
Target Start/End: Original strand, 4652786 - 4652863
Alignment:
Q  395 ggtgaggcctacgttaccctctcttatttagagggtaa-ttactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    |||||||||||| |||||||||||| |||||||||||| |||| ||||||||||    ||||||||||||||||||||||||    
T  4652786 ggtgaggcctacattaccctctcttgtttagagggtaatttaccctctcatgat----atcaaccaatcaaaatgtaatata 4652863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 395 - 475
Target Start/End: Original strand, 7487061 - 7487138
Alignment:
Q  395 ggtgaggcctacgttaccctctcttatttagagggtaa-ttactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||||||| ||||||||||||| |||||||||||| |||| ||||||||||    ||||||||||||||||||||||||    
T  7487061 ggtgaggcctatgttaccctctcttgtttagagggtaatttaccctctcatgat----atcaaccaatcaaaatgtaatata 7487138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 395 - 475
Target Start/End: Complemental strand, 23419537 - 23419460
Alignment:
Q  395 ggtgaggcctacgttaccctctcttatttagagggtaa-ttactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||||||||||||||||||||| |||||||||||| ||||  |||||||||    ||||||||||||||||||||||||    
T  23419537 ggtgaggcctacgttaccctctcttgtttagagggtaatttaccatctcatgat----atcaaccaatcaaaatgtaatata 23419460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 408 - 475
Target Start/End: Complemental strand, 46719750 - 46719687
Alignment:
Q  408 ttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    |||||||||||||||||||||||| |||| |||||||||||    |||||||||||||||||||||||    
T  46719750 ttaccctctcttatttagagggtatttaccctctcatgata----tcaaccaatcaaaatgtaatata 46719687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 392 - 476
Target Start/End: Original strand, 17360958 - 17361039
Alignment:
Q  392 attggtgaggcctacgttaccctctcttatttagagggtaa-ttactctctcatgatatcaatcaaccaatcaaaatgtaatatat 476  Q
    |||||||||| ||||||||||||||||| |||||||||||| ||||  |||||||||    |||||||||| ||||||||||||||    
T  17360958 attggtgaggtctacgttaccctctcttgtttagagggtaatttaccatctcatgat----atcaaccaattaaaatgtaatatat 17361039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 408 - 476
Target Start/End: Complemental strand, 16666721 - 16666657
Alignment:
Q  408 ttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatatat 476  Q
    ||||||||||||||||||| |||| |||| |||||||||||    ||||||||||||||||||||||||    
T  16666721 ttaccctctcttatttagaaggtatttaccctctcatgata----tcaaccaatcaaaatgtaatatat 16666657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 395 - 475
Target Start/End: Complemental strand, 20787271 - 20787195
Alignment:
Q  395 ggtgaggcctacgttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||| ||||||||||||||||| ||||||||  | |||| |||||||||||    |||||||||||||||||||||||    
T  20787271 ggtgaggactacgttaccctctcttgtttagaggtaatttaccctctcatgata----tcaaccaatcaaaatgtaatata 20787195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 395 - 475
Target Start/End: Original strand, 35824323 - 35824399
Alignment:
Q  395 ggtgaggcctacgttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    |||||||| |||||||||||||||| ||||||| |||||||  ||||||||||    || |||||||||||||||||||||    
T  35824323 ggtgaggcatacgttaccctctcttgtttagagagtaattaacctctcatgat----ataaaccaatcaaaatgtaatata 35824399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 394 - 456
Target Start/End: Original strand, 52447198 - 52447261
Alignment:
Q  394 tggtgaggcctacgttaccctctcttatttagagggtaa-ttactctctcatgatatcaatcaa 456  Q
    ||||||||| ||| ||| ||||||||||||||||||||| |||| |||||||||||||||||||    
T  52447198 tggtgaggcttacattatcctctcttatttagagggtaatttaccctctcatgatatcaatcaa 52447261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 408 - 476
Target Start/End: Complemental strand, 8941290 - 8941225
Alignment:
Q  408 ttaccctctcttatttagagggtaatt-actctctcatgatatcaatcaaccaatcaaaatgtaatatat 476  Q
    |||||||||||||||||||||||| || || |||||||||||||||    ||||||||||||||||||||    
T  8941290 ttaccctctcttatttagagggtattttaccctctcatgatatcaa----ccaatcaaaatgtaatatat 8941225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 403 - 472
Target Start/End: Original strand, 31309421 - 31309486
Alignment:
Q  403 ctacgttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaat 472  Q
    |||| |||||||||||| ||||| |||||||||| ||||||||||    |||||||||||||||||||||    
T  31309421 ctacattaccctctcttgtttagggggtaattaccctctcatgat----atcaaccaatcaaaatgtaat 31309486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 408 - 475
Target Start/End: Original strand, 23417211 - 23417275
Alignment:
Q  408 ttaccctctcttatttagagggta-attactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||||||||||||||||||||  |||| ||||||||||    ||||||||||||||||||||||||    
T  23417211 ttaccctctcttatttagagggtattttaccctctcatgat----atcaaccaatcaaaatgtaatata 23417275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 140 - 215
Target Start/End: Original strand, 45147121 - 45147196
Alignment:
Q  140 gctcgggctagcgtgagcgaccaacatagatctctcacagtgcaaattgaatggtgtccattagatatattattat 215  Q
    |||||||||||||||||||  |||||||| |||||||| ||| ||| |||||  ||||||| |||||||| |||||    
T  45147121 gctcgggctagcgtgagcgtacaacataggtctctcacggtgaaaactgaattttgtccatcagatatatgattat 45147196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 408 - 475
Target Start/End: Original strand, 23931602 - 23931665
Alignment:
Q  408 ttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    |||||||||||| ||||||||||| ||||||||| |||||    |||||| |||||||||||||||||    
T  23931602 ttaccctctcttgtttagagggtatttactctcttatgat----atcaacaaatcaaaatgtaatata 23931665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 396 - 475
Target Start/End: Complemental strand, 38623687 - 38623612
Alignment:
Q  396 gtgaggcctacgttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||||||  |||||||||||| ||||||||||| |||| || ||| |||||||||    ||||||||||||||||||    
T  38623687 gtgaggcctagattaccctctcttgtttagagggtatttaccctttcaagatatcaat----caatcaaaatgtaatata 38623612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 408 - 475
Target Start/End: Complemental strand, 43304907 - 43304844
Alignment:
Q  408 ttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    |||||||||||| ||||||||||| |||| || ||||||||    |||||||||||||||||||||||    
T  43304907 ttaccctctcttgtttagagggtatttaccctttcatgata----tcaaccaatcaaaatgtaatata 43304844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 145 - 191
Target Start/End: Original strand, 54131181 - 54131227
Alignment:
Q  145 ggctagcgtgagcgaccaacatagatctctcacagtgcaaattgaat 191  Q
    ||||||||||||||||||| | ||||||||||| |||||||||||||    
T  54131181 ggctagcgtgagcgaccaaaacagatctctcacggtgcaaattgaat 54131227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 390 - 475
Target Start/End: Complemental strand, 23933790 - 23933709
Alignment:
Q  390 aaattggtgaggcctacgttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    |||| ||||||  ||| |||||||| |||| ||||||||||||||||  ||||||||||    ||||||||| |||||||||||||    
T  23933790 aaataggtgagatctatgttaccctatcttgtttagagggtaattaccatctcatgata----tcaaccaattaaaatgtaatata 23933709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 408 - 475
Target Start/End: Original strand, 20352039 - 20352103
Alignment:
Q  408 ttaccctctcttatttagagggtaatt-actctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    |||||||||||||||||||| ||| || || ||||||||||||||    ||||||||||||||||||||    
T  20352039 ttaccctctcttatttagagagtattttaccctctcatgatatca----accaatcaaaatgtaatata 20352103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 408 - 475
Target Start/End: Original strand, 30823708 - 30823772
Alignment:
Q  408 ttaccctctcttatttagagggta-attactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||||||||||||||||||||  |||| ||||||||||    |||||||||||||||||| |||||    
T  30823708 ttaccctctcttatttagagggtattttaccctctcatgat----atcaaccaatcaaaatgttatata 30823772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 408 - 475
Target Start/End: Original strand, 41039585 - 41039649
Alignment:
Q  408 ttaccctctcttatttagagggtaatt-actctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||||||||||||||| |||| || || ||||||||||||||    ||||||||||||||||||||    
T  41039585 ttaccctctcttatttagaaggtattttaccctctcatgatatca----accaatcaaaatgtaatata 41039649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 408 - 476
Target Start/End: Original strand, 47805608 - 47805672
Alignment:
Q  408 ttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatatat 476  Q
    ||||||| |||| |||||||| || |||| ||||||||||    |||||||||||||||||||||||||    
T  47805608 ttaccctatcttgtttagaggatatttaccctctcatgat----atcaaccaatcaaaatgtaatatat 47805672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 408 - 475
Target Start/End: Complemental strand, 49970441 - 49970377
Alignment:
Q  408 ttaccctctcttatttagagggtaatt-actctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||| |||||| |||||||||||||| || |||||||||||||||||||    |||||||||||||||    
T  49970441 ttaccttctcttgtttagagggtaatttaccctctcatgatatcaatcaa----tcaaaatgtaatata 49970377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 395 - 434
Target Start/End: Original strand, 54919226 - 54919265
Alignment:
Q  395 ggtgaggcctacgttaccctctcttatttagagggtaatt 434  Q
    ||||| ||||||||||||||||||| ||||||||||||||    
T  54919226 ggtgaagcctacgttaccctctcttgtttagagggtaatt 54919265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 408 - 475
Target Start/End: Complemental strand, 54921437 - 54921373
Alignment:
Q  408 ttaccctctcttatttagagggta-attactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||||||||||||||||||||  |||| ||||||| ||    ||||||||||||||||||||||||    
T  54921437 ttaccctctcttatttagagggtattttaccctctcataat----atcaaccaatcaaaatgtaatata 54921373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 408 - 475
Target Start/End: Original strand, 13530046 - 13530109
Alignment:
Q  408 ttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||| |||| ||||||||||| |||| ||||||||||    || |||||||||||||||||||||    
T  13530046 ttaccctatcttgtttagagggtatttaccctctcatgat----ataaaccaatcaaaatgtaatata 13530109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 408 - 475
Target Start/End: Original strand, 27956539 - 27956602
Alignment:
Q  408 ttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    |||||||||||| | ||||| ||| |||| ||||||||||||||||    ||||||||||||||||||    
T  27956539 ttaccctctcttgtctagagtgtatttaccctctcatgatatcaat----caatcaaaatgtaatata 27956602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 416 - 475
Target Start/End: Original strand, 28172168 - 28172223
Alignment:
Q  416 tcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    |||||||||||||||| |||| ||||||||||    ||||||||||||||||| ||||||    
T  28172168 tcttatttagagggtatttaccctctcatgat----atcaaccaatcaaaatgcaatata 28172223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 475
Target Start/End: Original strand, 48952774 - 48952852
Alignment:
Q  393 ttggtgaggcctacgttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    |||||||||||||  ||||| |||||| ||||| ||||| |||| || ||| |||    ||||||||||||||||||||||||    
T  48952774 ttggtgaggcctagattaccttctcttgtttagggggtatttaccctttcaagat----atcaaccaatcaaaatgtaatata 48952852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 408 - 476
Target Start/End: Complemental strand, 49875781 - 49875716
Alignment:
Q  408 ttaccctctcttatttagagggta-attactctctcatgatatcaatcaaccaatcaaaatgtaatatat 476  Q
    |||||||||||| |||||||||||  ||||  |||||||||    |||||||||||||||||||||||||    
T  49875781 ttaccctctcttgtttagagggtattttaccttctcatgat----atcaaccaatcaaaatgtaatatat 49875716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 55; Significance: 2e-22; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 384 - 475
Target Start/End: Original strand, 15152360 - 15152447
Alignment:
Q  384 gataaaaaattggtgaggcctacgttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    |||||| ||| |||||||| |||||||||||||||| |||||||||||||||||||||||| ||    ||||||||||||||||||||||||    
T  15152360 gataaagaatgggtgaggcttacgttaccctctcttgtttagagggtaattactctctcataat----atcaaccaatcaaaatgtaatata 15152447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 395 - 475
Target Start/End: Complemental strand, 2292555 - 2292479
Alignment:
Q  395 ggtgaggcctacgttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    |||||||||||||||| |||||||| |||||||||||||||||||||||||||    || |||||||||||||||||||||    
T  2292555 ggtgaggcctacgttatcctctcttgtttagagggtaattactctctcatgat----ataaaccaatcaaaatgtaatata 2292479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 397 - 475
Target Start/End: Complemental strand, 28392013 - 28391939
Alignment:
Q  397 tgaggcctacgttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||||    ||||||||||||||||||    
T  28392013 tgaggcctacgttaccctctcttgtttagaggataattaccctctcatgatatcaat----caatcaaaatgtaatata 28391939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 395 - 475
Target Start/End: Complemental strand, 27551810 - 27551734
Alignment:
Q  395 ggtgaggcctacgttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||| ||| ||||||||||||| |||||||||||||||| ||||| ||||    ||||||||||||||||||||||||    
T  27551810 ggtgaggtctatgttaccctctcttgtttagagggtaattaccctctcctgat----atcaaccaatcaaaatgtaatata 27551734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 395 - 476
Target Start/End: Complemental strand, 14006263 - 14006185
Alignment:
Q  395 ggtgaggcctacgttaccctctcttatttagagggtaa-ttactctctcatgatatcaatcaaccaatcaaaatgtaatatat 476  Q
    |||||||||||| |||||||||||| || ||||||||| |||| ||||||||||    |||||||||||||||||||||||||    
T  14006263 ggtgaggcctacattaccctctcttgttaagagggtaatttaccctctcatgat----atcaaccaatcaaaatgtaatatat 14006185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 395 - 475
Target Start/End: Complemental strand, 3907118 - 3907041
Alignment:
Q  395 ggtgaggcctacgttaccctctcttatttagagggtaa-ttactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    |||||||||||| |||| ||||||| |||||||||||| |||| ||||||||||    ||||||||||||||||||||||||    
T  3907118 ggtgaggcctacattacactctcttgtttagagggtaatttaccctctcatgat----atcaaccaatcaaaatgtaatata 3907041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 394 - 474
Target Start/End: Complemental strand, 3851889 - 3851813
Alignment:
Q  394 tggtgaggcctacgttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatat 474  Q
    ||||||||| ||||||||||| |||||||||| |||||||||  |||||||||||    ||||||||||||||| ||||||    
T  3851889 tggtgaggcatacgttaccctatcttatttagggggtaattagcctctcatgata----tcaaccaatcaaaatataatat 3851813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 395 - 475
Target Start/End: Complemental strand, 4738476 - 4738400
Alignment:
Q  395 ggtgaggcctacgttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||| |||||||||||||| |||| |||||||||||||||| |||| |||||    || |||||||||||||||||||||    
T  4738476 ggtgaagcctacgttaccctatcttgtttagagggtaattaccctcttatgat----atgaaccaatcaaaatgtaatata 4738400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 394 - 457
Target Start/End: Original strand, 15398807 - 15398870
Alignment:
Q  394 tggtgaggcctacgttaccctctcttatttagagggtaattactctctcatgatatcaatcaac 457  Q
    ||||||||||||||||| ||| | || |||||||||||||||| ||||||||||||||| ||||    
T  15398807 tggtgaggcctacgttatcctttattgtttagagggtaattaccctctcatgatatcaaccaac 15398870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 393 - 475
Target Start/End: Complemental strand, 38282478 - 38282399
Alignment:
Q  393 ttggtgaggcctacgttaccctctcttatttagagggtaa-ttactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    |||||||| | |||||||||||||||| |||||||||||| |||  ||||||||||||||||    ||||||||||||||||||    
T  38282478 ttggtgagacttacgttaccctctcttgtttagagggtaatttatcctctcatgatatcaat----caatcaaaatgtaatata 38282399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 394 - 475
Target Start/End: Complemental strand, 77813 - 77735
Alignment:
Q  394 tggtgaggcctacgttaccctctcttatttagagggtaa-ttactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    |||||||||||||||||||||||||| |||||| ||||| |||  ||||||||||    |||||| |||||||||||||||||    
T  77813 tggtgaggcctacgttaccctctcttgtttagaaggtaatttatcctctcatgat----atcaacgaatcaaaatgtaatata 77735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 395 - 475
Target Start/End: Complemental strand, 39775261 - 39775187
Alignment:
Q  395 ggtgaggcctacgttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||| ||||||||||||||||| ||||| |||||||||  | ||||||||    ||||||||||||||||||||||||    
T  39775261 ggtgaggtctacgttaccctctcttttttagggggtaatta--ccctcatgat----atcaaccaatcaaaatgtaatata 39775187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 408 - 475
Target Start/End: Original strand, 39965191 - 39965255
Alignment:
Q  408 ttaccctctcttatttagagggta-attactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||||||||||||||||||||  ||| |||||||||||    ||||||||||||||||||||||||    
T  39965191 ttaccctctcttatttagagggtattttattctctcatgat----atcaaccaatcaaaatgtaatata 39965255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 408 - 471
Target Start/End: Original strand, 2290397 - 2290456
Alignment:
Q  408 ttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaa 471  Q
    |||||||||||| ||||||||||| |||| ||||||||||    ||||||||||||||||||||    
T  2290397 ttaccctctcttgtttagagggtatttaccctctcatgat----atcaaccaatcaaaatgtaa 2290456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 394 - 475
Target Start/End: Original strand, 6644536 - 6644613
Alignment:
Q  394 tggtgaggcctacgttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||| |||||||||||||||||| |||| | | |||||||  |||||||||    || |||||||||||||||||||||    
T  6644536 tggtgagacctacgttaccctctcttgtttaaaagataattaccttctcatgat----attaaccaatcaaaatgtaatata 6644613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 408 - 476
Target Start/End: Original strand, 1053147 - 1053211
Alignment:
Q  408 ttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatatat 476  Q
    |||| ||||||| ||||||||||| |||| ||||||||||    |||||| ||||||||||||||||||    
T  1053147 ttactctctcttgtttagagggtatttaccctctcatgat----atcaacaaatcaaaatgtaatatat 1053211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 403 - 475
Target Start/End: Complemental strand, 3767960 - 3767892
Alignment:
Q  403 ctacgttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    |||||||||| ||| || ||||| | ||||||||||||||||||||    ||||||||||||| |||||||||    
T  3767960 ctacgttaccttcttttgtttagggtgtaattactctctcatgata----tcaaccaatcaaagtgtaatata 3767892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 408 - 475
Target Start/End: Complemental strand, 25225447 - 25225383
Alignment:
Q  408 ttaccctctcttatttagagggta-attactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||||||||||||||||||||  |||| |||| |||||    ||||||||||||||||||||||||    
T  25225447 ttaccctctcttatttagagggtattttaccctcttatgat----atcaaccaatcaaaatgtaatata 25225383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 395 - 475
Target Start/End: Complemental strand, 37726131 - 37726056
Alignment:
Q  395 ggtgaggcctacgttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||||||||||||||||||||| |||||||| |  ||||  |||||||||    |||||| |||||||||||||||||    
T  37726131 ggtgaggcctacgttaccctctcttgtttagaggat-tttaccttctcatgat----atcaacaaatcaaaatgtaatata 37726056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 403 - 475
Target Start/End: Complemental strand, 38932579 - 38932511
Alignment:
Q  403 ctacgttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    |||| |||||||||||| ||||||||||| ||||||  ||| |||    ||||||||||||||||||||||||    
T  38932579 ctacattaccctctcttgtttagagggtatttactccttcaagat----atcaaccaatcaaaatgtaatata 38932511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 408 - 475
Target Start/End: Original strand, 3849805 - 3849868
Alignment:
Q  408 ttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    |||||||||||| |||| |||||| |||  ||||||||||    ||||||||||||||||||||||||    
T  3849805 ttaccctctcttgtttaaagggtatttatactctcatgat----atcaaccaatcaaaatgtaatata 3849868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 452
Target Start/End: Original strand, 3904932 - 3904977
Alignment:
Q  408 ttaccctctcttatttagagggta-attactctctcatgatatcaa 452  Q
    ||||||||||||||||||||||||  |||| |||||||||||||||    
T  3904932 ttaccctctcttatttagagggtattttaccctctcatgatatcaa 3904977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 416 - 456
Target Start/End: Original strand, 39067062 - 39067102
Alignment:
Q  416 tcttatttagagggtaattactctctcatgatatcaatcaa 456  Q
    |||||||||||||||| |||  |||||||||||||||||||    
T  39067062 tcttatttagagggtatttatcctctcatgatatcaatcaa 39067102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 394 - 475
Target Start/End: Complemental strand, 42080962 - 42080885
Alignment:
Q  394 tggtgaggcctacgttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||| ||||||||| || ||||| ||||  || ||||||| || ||||||||||||    |||||||||||||||||||    
T  42080962 tggtgagtcctacgttagcccctcttgtttaagggataattaccctttcatgatatcaa----ccaatcaaaatgtaatata 42080885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 2e-19; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 395 - 476
Target Start/End: Complemental strand, 37220319 - 37220241
Alignment:
Q  395 ggtgaggcctacgttaccctctcttatttagagggtaa-ttactctctcatgatatcaatcaaccaatcaaaatgtaatatat 476  Q
    ||||||||||||||||||||||||| |||||||||||| ||||| |||||||||    |||||||||||||||||||||||||    
T  37220319 ggtgaggcctacgttaccctctcttgtttagagggtaatttactatctcatgat----atcaaccaatcaaaatgtaatatat 37220241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 394 - 475
Target Start/End: Original strand, 53845125 - 53845203
Alignment:
Q  394 tggtgaggcctacgttaccctctcttatttagagggtaa-ttactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||||| ||||||||||||||||||||||||||||| |||| ||||||||||    ||||||||||||||||||||||||    
T  53845125 tggtgaggcttacgttaccctctcttatttagagggtaatttaccctctcatgat----atcaaccaatcaaaatgtaatata 53845203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 397 - 475
Target Start/End: Complemental strand, 44843409 - 44843334
Alignment:
Q  397 tgaggcctacgttaccctctcttatttagagggtaa-ttactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||||||||||||||||||| |||||||||||| |||| ||||||||||    ||||||||||||||||||||||||    
T  44843409 tgaggcctacgttaccctctcttgtttagagggtaatttaccctctcatgat----atcaaccaatcaaaatgtaatata 44843334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 399 - 456
Target Start/End: Complemental strand, 3892892 - 3892835
Alignment:
Q  399 aggcctacgttaccctctcttatttagagggtaattactctctcatgatatcaatcaa 456  Q
    |||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||    
T  3892892 aggcttacgttaccctctcttgtttagagggtaattacactctcatgatatcaatcaa 3892835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 395 - 475
Target Start/End: Complemental strand, 8852363 - 8852286
Alignment:
Q  395 ggtgaggcctacgttaccctctcttatttagagggtaa-ttactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||| ||||||||||||||||| |||||||| ||| |||||||||||||||    ||||||||||||||||||||||||    
T  8852363 ggtgaggactacgttaccctctcttgtttagaggataatttactctctcatgat----atcaaccaatcaaaatgtaatata 8852286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 395 - 475
Target Start/End: Original strand, 13213286 - 13213363
Alignment:
Q  395 ggtgaggcctacgttaccctctcttatttagagggtaa-ttactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||||||| ||||||||||||| |||||||||||| |||| ||||||||||    ||||||||||||||||||||||||    
T  13213286 ggtgaggcctatgttaccctctcttgtttagagggtaatttaccctctcatgat----atcaaccaatcaaaatgtaatata 13213363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 395 - 475
Target Start/End: Original strand, 22604711 - 22604788
Alignment:
Q  395 ggtgaggcctacgttaccctctcttatttagagggtaa-ttactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||| ||||||||||||||||||| |||||||||||| |||| ||||||||||||||||    ||||||||||||||||||    
T  22604711 ggtgaagcctacgttaccctctcttgtttagagggtaatttaccctctcatgatatcaat----caatcaaaatgtaatata 22604788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 395 - 475
Target Start/End: Original strand, 23019678 - 23019755
Alignment:
Q  395 ggtgaggcctacgttaccctctcttatttagagggtaa-ttactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||||||||||||| |||||||||||||||||||| |||| ||||||||||    ||||||||||| ||||||||||||    
T  23019678 ggtgaggcctacgttacactctcttatttagagggtaatttaccctctcatgat----atcaaccaatcgaaatgtaatata 23019755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 395 - 475
Target Start/End: Complemental strand, 30043704 - 30043627
Alignment:
Q  395 ggtgaggcctacgttaccctctcttatttagagggtaa-ttactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    |||||||||||| |||||||||||| |||||||||||| |||| ||||||||||    ||||||||||||||||||||||||    
T  30043704 ggtgaggcctacattaccctctcttgtttagagggtaatttaccctctcatgat----atcaaccaatcaaaatgtaatata 30043627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 392 - 475
Target Start/End: Complemental strand, 4233264 - 4233184
Alignment:
Q  392 attggtgaggcctacgttaccctctcttatttagagggtaa-ttactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    |||||||||||||| ||||||||||||| |||||||||||| |||| ||||||| ||    ||||||||||||||||||||||||    
T  4233264 attggtgaggcctaagttaccctctcttgtttagagggtaatttaccctctcataat----atcaaccaatcaaaatgtaatata 4233184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 397 - 475
Target Start/End: Original strand, 45169817 - 45169892
Alignment:
Q  397 tgaggcctacgttaccctctcttatttagagggtaa-ttactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||| ||    |||||| |||||||||||||||||    
T  45169817 tgaggcctacgttaccctctcttttttagagggtaatttactctctcataat----atcaactaatcaaaatgtaatata 45169892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 393 - 475
Target Start/End: Complemental strand, 50548709 - 50548630
Alignment:
Q  393 ttggtgaggcctacgttaccctctcttatttagagggtaattactc-tctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||||||||||||||||||||||| |||||| |||||||  || |||||||||    ||||||||||||||||||||||||    
T  50548709 ttggtgaggcctacgttaccctctcttgtttagatggtaatttatcatctcatgat----atcaaccaatcaaaatgtaatata 50548630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 395 - 476
Target Start/End: Complemental strand, 6177424 - 6177346
Alignment:
Q  395 ggtgaggcctacgttaccctctcttatttagagggtaa-ttactctctcatgatatcaatcaaccaatcaaaatgtaatatat 476  Q
    ||||||||||||||||| ||||||| |||||||||||| |||| ||||||||||    |||||| ||||||||||||||||||    
T  6177424 ggtgaggcctacgttacgctctcttgtttagagggtaatttaccctctcatgat----atcaactaatcaaaatgtaatatat 6177346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 395 - 477
Target Start/End: Complemental strand, 10827853 - 10827775
Alignment:
Q  395 ggtgaggcctacgttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatatatg 477  Q
    |||||||  ||| |||||||||||||||||  ||||||||||||||||||||||    ||||||||| |||||||||||||||    
T  10827853 ggtgaggtttacattaccctctcttatttaaggggtaattactctctcatgata----tcaaccaattaaaatgtaatatatg 10827775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 395 - 475
Target Start/End: Original strand, 2217871 - 2217948
Alignment:
Q  395 ggtgaggcctacgttaccctctcttatttagagggtaa-ttactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    |||||||||||| |||| |||||||||||||| ||||| |||| ||||||||||    ||||||||||||||||||||||||    
T  2217871 ggtgaggcctacattactctctcttatttagaaggtaatttaccctctcatgat----atcaaccaatcaaaatgtaatata 2217948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 395 - 475
Target Start/End: Complemental strand, 15084784 - 15084707
Alignment:
Q  395 ggtgaggcctacgttaccctctcttatttagagggtaa-ttactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||| |||||||| |||||||| |||||||||||| |||| ||||||||||    ||||||||||||||||||||||||    
T  15084784 ggtgaggactacgttatcctctcttgtttagagggtaatttaccctctcatgat----atcaaccaatcaaaatgtaatata 15084707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 396 - 475
Target Start/End: Original strand, 41101505 - 41101581
Alignment:
Q  396 gtgaggcctacgttaccctctcttatttagagggtaa-ttactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    |||||| |||||||||||||||||||||||||| ||| ||||  |||||||||||||||    ||||||||||||||||||    
T  41101505 gtgaggtctacgttaccctctcttatttagaggataatttaccttctcatgatatcaat----caatcaaaatgtaatata 41101581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 408 - 475
Target Start/End: Complemental strand, 45172762 - 45172698
Alignment:
Q  408 ttaccctctcttatttagagggtaatt-actctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    |||||||||||||||||||||||| || ||||||||||||||||||    |||||||||||||||||||    
T  45172762 ttaccctctcttatttagagggtattttactctctcatgatatcaa----ccaatcaaaatgtaatata 45172698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 401 - 475
Target Start/End: Original strand, 18410058 - 18410129
Alignment:
Q  401 gcctacgttaccctctcttatttagagggtaa-ttactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    |||||||||||||||||||||||| ||| ||| ||| |||||||||||    ||||||||||||||||||||||||    
T  18410058 gcctacgttaccctctcttatttaaaggataatttattctctcatgat----atcaaccaatcaaaatgtaatata 18410129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 396 - 475
Target Start/End: Original strand, 40423500 - 40423574
Alignment:
Q  396 gtgaggcctacgttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||| |||||||||||||||||| |||||| ||||||||| ||||||||||    || |||||||||||||||||||||    
T  40423500 gtgagacctacgttaccctctcttgtttagaaggtaattac-ctctcatgat----ataaaccaatcaaaatgtaatata 40423574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 398 - 475
Target Start/End: Original strand, 11121075 - 11121149
Alignment:
Q  398 gaggcctacgttaccctctcttatttagagggtaa-ttactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    |||| ||| ||||||||||||| |||||||||||| |||| ||||||||||    ||||||||||||||||||||||||    
T  11121075 gaggactaggttaccctctcttgtttagagggtaatttaccctctcatgat----atcaaccaatcaaaatgtaatata 11121149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 392 - 474
Target Start/End: Original strand, 55411091 - 55411169
Alignment:
Q  392 attggtgaggcctacgttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatat 474  Q
    |||||| || |||||||||||||||||||||||  || |||||||  |||||||||||||||    |||||||||||||||||    
T  55411091 attggtcagacctacgttaccctctcttatttaagggataattaccgtctcatgatatcaat----caatcaaaatgtaatat 55411169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 408 - 476
Target Start/End: Complemental strand, 13243621 - 13243556
Alignment:
Q  408 ttaccctctcttatttagagggtaatt-actctctcatgatatcaatcaaccaatcaaaatgtaatatat 476  Q
    |||||||||||||||||||||||| || || |||||||||||||||    ||||||||||||||||||||    
T  13243621 ttaccctctcttatttagagggtattttaccctctcatgatatcaa----ccaatcaaaatgtaatatat 13243556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 395 - 475
Target Start/End: Original strand, 27320852 - 27320929
Alignment:
Q  395 ggtgaggcctacgttaccctctcttatttagagggtaa-ttactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||| |||| ||||| |||||||| |||||||||||| |||| ||||||||||    ||||||||||||||||||||||||    
T  27320852 ggtgaagcctgcgttatcctctcttgtttagagggtaatttaccctctcatgat----atcaaccaatcaaaatgtaatata 27320929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 394 - 475
Target Start/End: Complemental strand, 51723036 - 51722959
Alignment:
Q  394 tggtgaggcctacgttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||||||||||||||||| |||| ||||||| |||||||| |||| |||||    || ||||||| |||||||||||||    
T  51723036 tggtgaggcctacgttaccctttcttgtttagagagtaattaccctcttatgat----ataaaccaattaaaatgtaatata 51722959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 408 - 452
Target Start/End: Complemental strand, 55219929 - 55219885
Alignment:
Q  408 ttaccctctcttatttagagggtaattactctctcatgatatcaa 452  Q
    |||||||||||||||||||||||| |||| |||||||||||||||    
T  55219929 ttaccctctcttatttagagggtatttaccctctcatgatatcaa 55219885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 408 - 475
Target Start/End: Complemental strand, 23022073 - 23022009
Alignment:
Q  408 ttaccctctcttatttagagggtaatt-actctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    |||||||||||||||||||||||| || || |||||||||||||||    |||||||||||||||||||    
T  23022073 ttaccctctcttatttagagggtattttaccctctcatgatatcaa----ccaatcaaaatgtaatata 23022009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 400 - 475
Target Start/End: Complemental strand, 27239270 - 27239198
Alignment:
Q  400 ggcctacgttaccctctcttatttagagggtaatt-actctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    |||||| ||||||||| ||| |||||||||||||| || |||||||||||||||    |||||||||||||||||||    
T  27239270 ggcctaggttaccctcacttgtttagagggtaatttaccctctcatgatatcaa----ccaatcaaaatgtaatata 27239198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 408 - 475
Target Start/End: Original strand, 27330126 - 27330190
Alignment:
Q  408 ttaccctctcttatttagagggta-attactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||||||||||||||||||||  |||| ||||||||||    ||||||||||||||||||||||||    
T  27330126 ttaccctctcttatttagagggtattttaccctctcatgat----atcaaccaatcaaaatgtaatata 27330190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 408 - 475
Target Start/End: Original strand, 37218180 - 37218244
Alignment:
Q  408 ttaccctctcttatttagagggta-attactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||||||||||||||||||||  |||| ||||||||||    ||||||||||||||||||||||||    
T  37218180 ttaccctctcttatttagagggtattttaccctctcatgat----atcaaccaatcaaaatgtaatata 37218244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 408 - 475
Target Start/End: Original strand, 37785292 - 37785356
Alignment:
Q  408 ttaccctctcttatttagagggtaatt-actctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    |||||||||||| |||||||||||||| || ||||||||||||||    ||||||||||||||||||||    
T  37785292 ttaccctctcttgtttagagggtaatttaccctctcatgatatca----accaatcaaaatgtaatata 37785356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 408 - 475
Target Start/End: Complemental strand, 40908537 - 40908473
Alignment:
Q  408 ttaccctctcttatttagagggtaatt-actctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    |||||||||||||||||||||||| || || |||||||||||||||    |||||||||||||||||||    
T  40908537 ttaccctctcttatttagagggtattttaccctctcatgatatcaa----ccaatcaaaatgtaatata 40908473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 403 - 475
Target Start/End: Original strand, 43338223 - 43338291
Alignment:
Q  403 ctacgttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    |||| ||||||  |||| |||||||||||||||| ||||||||||    ||||||||||||||||||||||||    
T  43338223 ctacattacccaatcttgtttagagggtaattaccctctcatgat----atcaaccaatcaaaatgtaatata 43338291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 412 - 475
Target Start/End: Original strand, 47910968 - 47911028
Alignment:
Q  412 cctctcttatttagagggtaatt-actctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||||||||||||||||||| || ||||||||||||||    ||||||||||||||||||||    
T  47910968 cctctcttatttagagggtaatttaccctctcatgatatca----accaatcaaaatgtaatata 47911028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 408 - 475
Target Start/End: Complemental strand, 38698856 - 38698793
Alignment:
Q  408 ttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    |||||||||||| |||||||| || |||| |||||||||||    |||||||||||||||||||||||    
T  38698856 ttaccctctcttgtttagaggatatttaccctctcatgata----tcaaccaatcaaaatgtaatata 38698793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 408 - 475
Target Start/End: Original strand, 50535968 - 50536031
Alignment:
Q  408 ttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    |||||||||||| |||| |||||| |||| ||||||||||    ||||||||||||||||||||||||    
T  50535968 ttaccctctcttgtttatagggtatttaccctctcatgat----atcaaccaatcaaaatgtaatata 50536031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 408 - 471
Target Start/End: Original strand, 51720873 - 51720932
Alignment:
Q  408 ttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaa 471  Q
    |||||||||||||||||||| ||| |||| |||||||||    |||||||||||||||||||||    
T  51720873 ttaccctctcttatttagagagtatttaccctctcatga----aatcaaccaatcaaaatgtaa 51720932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 408 - 472
Target Start/End: Complemental strand, 11123693 - 11123632
Alignment:
Q  408 ttaccctctcttatttagagggta-attactctctcatgatatcaatcaaccaatcaaaatgtaat 472  Q
    ||||||||||||||||||||||||  |||| ||||||||||    |||||||||||||||||||||    
T  11123693 ttaccctctcttatttagagggtattttaccctctcatgat----atcaaccaatcaaaatgtaat 11123632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 399 - 475
Target Start/End: Original strand, 40905999 - 40906072
Alignment:
Q  399 aggcctacgttaccctctcttatttagagggtaa-ttactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    |||||||| |||||||||||| |||||||||||| |||| ||||| ||||    || |||||||||||||||||||||    
T  40905999 aggcctacattaccctctcttgtttagagggtaatttaccctctcgtgat----attaaccaatcaaaatgtaatata 40906072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 403 - 475
Target Start/End: Complemental strand, 47913160 - 47913091
Alignment:
Q  403 ctacgttaccctctcttatttagagggtaa-ttactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    |||| |||||||||||| |||||||||||| ||||||||||| |||    |||||||||||||||| |||||||    
T  47913160 ctactttaccctctcttttttagagggtaatttactctctcaagat----atcaaccaatcaaaatataatata 47913091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 408 - 475
Target Start/End: Complemental strand, 2220024 - 2219960
Alignment:
Q  408 ttaccctctcttatttagagggtaatt-actctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    |||||||||||||||||||| ||| || || |||||||||||||||    |||||||||||||||||||    
T  2220024 ttaccctctcttatttagagagtattttaccctctcatgatatcaa----ccaatcaaaatgtaatata 2219960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 408 - 475
Target Start/End: Complemental strand, 27128217 - 27128153
Alignment:
Q  408 ttaccctctcttatttagagggtaatt-actctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||| |||||||||||||||| || ||||| ||||||||||||    |||||||||||||||||||    
T  27128217 ttaccctatcttatttagagggtattttactctatcatgatatcaa----ccaatcaaaatgtaatata 27128153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 408 - 476
Target Start/End: Original strand, 31311679 - 31311743
Alignment:
Q  408 ttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatatat 476  Q
    |||||||||||| ||||||| ||| |||| ||||||||||    || ||||||||||||||||||||||    
T  31311679 ttaccctctcttgtttagagcgtatttaccctctcatgat----ataaaccaatcaaaatgtaatatat 31311743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 395 - 434
Target Start/End: Original strand, 37785253 - 37785292
Alignment:
Q  395 ggtgaggcctacgttaccctctcttatttagagggtaatt 434  Q
    ||||||| ||||||||||||||||| ||||||||||||||    
T  37785253 ggtgaggactacgttaccctctcttgtttagagggtaatt 37785292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 475
Target Start/End: Original strand, 38696695 - 38696767
Alignment:
Q  399 aggcctacgttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    |||||||||||| |||||||| |||||||| ||||||| || ||||||||| |||     |||||||||||||||||    
T  38696695 aggcctacgttatcctctcttgtttagaggataattaccctttcatgatataaat----taatcaaaatgtaatata 38696767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 408 - 475
Target Start/End: Original strand, 41695927 - 41695991
Alignment:
Q  408 ttaccctctcttatttagagggtaatt-actctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||| ||||||||||||| || || |||||||||||||||||    ||||||||||||||||||||    
T  41695927 ttaccctatcttatttagaggttattttactctctcatgatatca----accaatcaaaatgtaatata 41695991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 408 - 475
Target Start/End: Original strand, 44841237 - 44841301
Alignment:
Q  408 ttaccctctcttatttagagggtaatt-actctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||| |||||||||||||||||| || || ||||||||||||||    ||||||||||||||||||||    
T  44841237 ttaccgtctcttatttagagggtattttaccctctcatgatatca----accaatcaaaatgtaatata 44841301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 408 - 475
Target Start/End: Original strand, 50546484 - 50546548
Alignment:
Q  408 ttaccctctcttatttagagggtaatt-actctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||||||||||||| |||||| || || ||||||||||||||    ||||||||||||||||||||    
T  50546484 ttaccctctcttatttatagggtattttaccctctcatgatatca----accaatcaaaatgtaatata 50546548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 408 - 475
Target Start/End: Complemental strand, 53583752 - 53583688
Alignment:
Q  408 ttaccctctcttatttagagggta-attactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||||||||||||||||||||  |||  ||||||||||    ||||||||||||||||||||||||    
T  53583752 ttaccctctcttatttagagggtattttatcctctcatgat----atcaaccaatcaaaatgtaatata 53583688  T

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Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 408 - 475
Target Start/End: Complemental strand, 18763961 - 18763898
Alignment:
Q  408 ttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||| |||||||||||||||||| |||  |||||||||||    |||||||||||| ||||||||||    
T  18763961 ttaccttctcttatttagagggtatttatcctctcatgata----tcaaccaatcaagatgtaatata 18763898  T

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Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 452
Target Start/End: Original strand, 4230859 - 4230904
Alignment:
Q  408 ttaccctctcttatttagagggta-attactctctcatgatatcaa 452  Q
    ||||||||||||||||||||||||  |||| |||||||||||||||    
T  4230859 ttaccctctcttatttagagggtattttaccctctcatgatatcaa 4230904  T

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Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 452
Target Start/End: Original strand, 30438278 - 30438323
Alignment:
Q  408 ttaccctctcttatttagagggta-attactctctcatgatatcaa 452  Q
    ||||||||||||||||||||||||  |||| |||||||||||||||    
T  30438278 ttaccctctcttatttagagggtattttaccctctcatgatatcaa 30438323  T

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Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 410 - 475
Target Start/End: Original strand, 52745669 - 52745731
Alignment:
Q  410 accctctcttatttagagggt-aattactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||||||||||||||||| || ||| |||| |||||||||||    ||||||||||||||||||    
T  52745669 accctctcttatttagagggtaaaataccctcttatgatatcaat----caatcaaaatgtaatata 52745731  T

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Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 407 - 475
Target Start/End: Original strand, 8849764 - 8849829
Alignment:
Q  407 gttaccctctcttatttagagggta-attactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    |||||||| ||||||||||||||||  ||||  |||||||||    ||||||||||||||||||||||||    
T  8849764 gttaccctatcttatttagagggtattttaccatctcatgat----atcaaccaatcaaaatgtaatata 8849829  T

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Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 403 - 475
Target Start/End: Original strand, 27126047 - 27126116
Alignment:
Q  403 ctacgttaccctctcttatttagagggtaatt-actctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||||| ||||||| |||||||| ||||| ||||||| ||||||||||    ||||| |||||||||||||    
T  27126047 ctacgttactctctcttgtttagaggataatttactctcttatgatatcaa----ccaattaaaatgtaatata 27126116  T

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Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 398 - 475
Target Start/End: Complemental strand, 32001291 - 32001218
Alignment:
Q  398 gaggcctacgttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||||  |||||||||||||||||| ||||| |||| || |||  ||    ||||||||||||||||||||||||    
T  32001291 gaggcctagattaccctctcttatttagggggtatttaccctttcaaaat----atcaaccaatcaaaatgtaatata 32001218  T

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Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 395 - 475
Target Start/End: Original strand, 42825855 - 42825932
Alignment:
Q  395 ggtgaggcctacgttaccctctcttatttagagggtaa-ttactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||| ||| |||||  |||||| |||||||||||| |||| ||||||||||    |||||||| |||||||||||||||    
T  42825855 ggtgaggtctatgttactatctcttgtttagagggtaatttaccctctcatgat----atcaaccagtcaaaatgtaatata 42825932  T

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Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 408 - 456
Target Start/End: Complemental strand, 42828036 - 42827988
Alignment:
Q  408 ttaccctctcttatttagagggtaattactctctcatgatatcaatcaa 456  Q
    ||||| ||| || ||||||||||| |||| |||||||||||||||||||    
T  42828036 ttaccatcttttgtttagagggtatttaccctctcatgatatcaatcaa 42827988  T

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Target: scaffold0115 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 397 - 475
Target Start/End: Original strand, 20718 - 20793
Alignment:
Q  397 tgaggcctacgttaccctctcttatttagagggtaa-ttactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    |||||||||||||||||| |||| |||||||||||| |||| |||| |||||    ||||||||||||||||||||||||    
T  20718 tgaggcctacgttaccctatcttgtttagagggtaatttaccctcttatgat----atcaaccaatcaaaatgtaatata 20793  T

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Target: scaffold0779 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0779
Description:

Target: scaffold0779; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 408 - 476
Target Start/End: Complemental strand, 204 - 139
Alignment:
Q  408 ttaccctctcttatttagagggtaatt-actctctcatgatatcaatcaaccaatcaaaatgtaatatat 476  Q
    |||||||||||||||||||||||| || || |||||||||||||||    ||||||||||||||||||||    
T  204 ttaccctctcttatttagagggtattttaccctctcatgatatcaa----ccaatcaaaatgtaatatat 139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 395 - 475
Target Start/End: Complemental strand, 49157 - 49080
Alignment:
Q  395 ggtgaggcctacgttaccctctcttatttagagggtaattactc-tctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||| ||| ||||||||||||| ||||||||||||||  || |||||||||    ||||||||||||||||||||||||    
T  49157 ggtgaggtctatgttaccctctcttgtttagagggtaatttatcttctcatgat----atcaaccaatcaaaatgtaatata 49080  T

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Target: scaffold0006 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 408 - 475
Target Start/End: Complemental strand, 56548 - 56484
Alignment:
Q  408 ttaccctctcttatttagagggta-attactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||||||||||||||||||||  |||| ||| ||||||    ||||||||||||||||||||||||    
T  56548 ttaccctctcttatttagagggtattttaccctcccatgat----atcaaccaatcaaaatgtaatata 56484  T

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Target: scaffold0208 (Bit Score: 31; Significance: 0.00000004; HSPs: 2)
Name: scaffold0208
Description:

Target: scaffold0208; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 408 - 475
Target Start/End: Original strand, 3873 - 3936
Alignment:
Q  408 ttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    |||||||||||| ||||||||||| |||| |  |||||||||||||    ||||||||||||||||||    
T  3873 ttaccctctcttgtttagagggtatttaccccttcatgatatcaat----caatcaaaatgtaatata 3936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 404 - 475
Target Start/End: Complemental strand, 5944 - 5877
Alignment:
Q  404 tacgttaccctctcttatttagagggtaattactctctcatgatatcaatcaaccaatcaaaatgtaatata 475  Q
    ||||||| ||| ||||||| |||| |||||||| |||| ||||||||||    |||||||||||||||||||    
T  5944 tacgttatcctatcttattcagagagtaattaccctcttatgatatcaa----ccaatcaaaatgtaatata 5877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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