View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17719_high_12 (Length: 239)
Name: NF17719_high_12
Description: NF17719
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17719_high_12 |
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Alignment Details
Target: chr1 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 14 - 223
Target Start/End: Complemental strand, 44799147 - 44798938
Alignment:
| Q |
14 |
agcagagaaaccaacatgcataaactctttaaatctctcagaaagatcaatgaatgaagcaataattggtgttggaggtctagttgaagagtaactaacc |
113 |
Q |
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| T |
44799147 |
agcagagaaaccaacatgcataaactctttaaatctctcagaaagatcaatgaatgaagcaataattggtgttggaggtctagttgaagagtaactaacc |
44799048 |
T |
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| Q |
114 |
caaacacgaaccattttcatatcatctctatactcaatccatgcattgatgattttcccacttttcaaatcaatccgacgtgaaagaagatcagcagaag |
213 |
Q |
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| T |
44799047 |
caaacacgaaccattttcatatcatctctatactcaatccatgcattgatgattttcccacttttcaaatcaatccgacgtgaaagaagatcagcagaag |
44798948 |
T |
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| Q |
214 |
caaaagaaac |
223 |
Q |
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|||||||||| |
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| T |
44798947 |
caaaagaaac |
44798938 |
T |
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