View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1771_high_22 (Length: 292)
Name: NF1771_high_22
Description: NF1771
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1771_high_22 |
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Alignment Details
Target: chr7 (Bit Score: 267; Significance: 1e-149; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 1 - 275
Target Start/End: Complemental strand, 37338009 - 37337735
Alignment:
| Q |
1 |
tcacctattcacaaatatatcactatggctaactccaaaaccctattatgcctaaccttcttcacaacctttctcttttcttcctttgttaacgccactt |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37338009 |
tcacctattcacaaatatatcactatggctaactccaaaaccctattatgcctaaccttcttcacaacctttctcttttcttcctttgttaacgccactt |
37337910 |
T |
|
| Q |
101 |
actaccaaaatatttctccatcataccttggtttcaaacaagagaaacttactcacatccattttttcttgcatgacatcgtttctggcccaaagcctac |
200 |
Q |
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|
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37337909 |
actaccaaaatatttctccatcataccttggtttcaaacaagagaaactcactcacatccattttttcttgcatgacatcgtttctggcccaaagcctac |
37337810 |
T |
|
| Q |
201 |
cgtagtcatatcagctgaatcgcccttaaacggtaaatccaaatcacccttaccatttggctccatagtggtttt |
275 |
Q |
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||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37337809 |
cgtagtcatatcagctgaatcacccttaaacggtaaatccaaatcacccttaccatttggctccatagtggtttt |
37337735 |
T |
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