View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1771_high_29 (Length: 246)

Name: NF1771_high_29
Description: NF1771
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1771_high_29
NF1771_high_29
[»] chr2 (15 HSPs)
chr2 (16-205)||(3586412-3586601)
chr2 (18-194)||(15825205-15825380)
chr2 (18-87)||(36267549-36267618)
chr2 (18-127)||(18772299-18772408)
chr2 (22-90)||(19919034-19919102)
chr2 (18-78)||(24499840-24499900)
chr2 (18-165)||(10923059-10923205)
chr2 (20-84)||(45258126-45258190)
chr2 (18-68)||(12169024-12169074)
chr2 (19-50)||(12127671-12127702)
chr2 (18-84)||(15390559-15390625)
chr2 (16-66)||(24755517-24755567)
chr2 (18-95)||(18135922-18135999)
chr2 (18-83)||(45715046-45715111)
chr2 (28-84)||(29711077-29711133)
[»] chr4 (8 HSPs)
chr4 (18-170)||(2674462-2674614)
chr4 (16-205)||(29157151-29157340)
chr4 (18-78)||(12683836-12683896)
chr4 (18-169)||(19643753-19643903)
chr4 (18-84)||(47253328-47253394)
chr4 (18-64)||(19809752-19809798)
chr4 (18-64)||(19818744-19818790)
chr4 (28-84)||(5518601-5518657)
[»] chr7 (14 HSPs)
chr7 (18-203)||(26762766-26762951)
chr7 (18-200)||(9135220-9135401)
chr7 (18-170)||(5863238-5863390)
chr7 (18-194)||(13291988-13292163)
chr7 (18-147)||(39879438-39879568)
chr7 (16-104)||(12644834-12644923)
chr7 (13-84)||(16204337-16204408)
chr7 (18-77)||(29373497-29373556)
chr7 (29-84)||(43172010-43172065)
chr7 (20-78)||(7486598-7486656)
chr7 (18-134)||(16987016-16987132)
chr7 (19-50)||(21161293-21161324)
chr7 (22-60)||(9867937-9867975)
chr7 (27-84)||(12265099-12265156)
[»] chr3 (15 HSPs)
chr3 (21-114)||(16704456-16704549)
chr3 (18-84)||(9801058-9801124)
chr3 (18-169)||(1770876-1771025)
chr3 (20-88)||(2311804-2311872)
chr3 (27-83)||(20622468-20622524)
chr3 (18-83)||(17143724-17143789)
chr3 (18-78)||(28715468-28715528)
chr3 (18-93)||(30606979-30607054)
chr3 (18-84)||(21342261-21342327)
chr3 (26-78)||(8122895-8122947)
chr3 (119-166)||(9800977-9801024)
chr3 (52-135)||(12108504-12108587)
chr3 (61-132)||(25496032-25496103)
chr3 (22-84)||(7835548-7835610)
chr3 (28-84)||(14860073-14860129)
[»] chr5 (12 HSPs)
chr5 (18-169)||(32418375-32418526)
chr5 (18-83)||(22903144-22903209)
chr5 (18-78)||(20025334-20025394)
chr5 (18-94)||(26994570-26994646)
chr5 (12-83)||(25333780-25333851)
chr5 (18-65)||(27083231-27083278)
chr5 (15-64)||(34493561-34493610)
chr5 (16-116)||(22865810-22865910)
chr5 (52-104)||(31202329-31202381)
chr5 (67-195)||(24546442-24546569)
chr5 (18-84)||(24647339-24647405)
chr5 (28-84)||(25537466-25537522)
[»] scaffold0291 (2 HSPs)
scaffold0291 (24-166)||(15323-15464)
scaffold0291 (18-64)||(8571-8617)
[»] chr6 (20 HSPs)
chr6 (30-166)||(11087565-11087701)
chr6 (16-169)||(33596910-33597063)
chr6 (22-165)||(31423731-31423873)
chr6 (18-180)||(18147357-18147519)
chr6 (19-204)||(689712-689896)
chr6 (18-78)||(19305515-19305575)
chr6 (16-147)||(15480252-15480383)
chr6 (13-84)||(20148361-20148432)
chr6 (13-84)||(22184396-22184467)
chr6 (18-162)||(17380148-17380292)
chr6 (18-165)||(22572095-22572242)
chr6 (18-65)||(3404855-3404902)
chr6 (25-84)||(16131026-16131085)
chr6 (21-68)||(30681046-30681093)
chr6 (18-104)||(19277030-19277116)
chr6 (16-65)||(34572987-34573036)
chr6 (22-65)||(12203631-12203674)
chr6 (18-188)||(34064246-34064415)
chr6 (18-50)||(14080534-14080566)
chr6 (18-50)||(14268482-14268514)
[»] chr1 (15 HSPs)
chr1 (16-205)||(22414824-22415013)
chr1 (18-84)||(12177437-12177503)
chr1 (18-164)||(16050445-16050591)
chr1 (13-75)||(23280245-23280307)
chr1 (18-84)||(26977791-26977857)
chr1 (18-59)||(16030446-16030487)
chr1 (25-78)||(52565638-52565691)
chr1 (18-104)||(23728774-23728860)
chr1 (18-68)||(34273138-34273188)
chr1 (20-88)||(2140918-2140986)
chr1 (18-50)||(5671821-5671853)
chr1 (143-195)||(14254906-14254958)
chr1 (18-65)||(5459702-5459749)
chr1 (16-46)||(33101519-33101549)
chr1 (18-78)||(25408147-25408207)
[»] chr8 (15 HSPs)
chr8 (18-153)||(21416789-21416924)
chr8 (12-142)||(26916814-26916944)
chr8 (20-84)||(18322996-18323060)
chr8 (18-165)||(30477692-30477839)
chr8 (25-106)||(17319586-17319665)
chr8 (18-166)||(5859866-5860014)
chr8 (18-78)||(6928070-6928130)
chr8 (18-94)||(24507508-24507584)
chr8 (18-84)||(3459458-3459524)
chr8 (18-69)||(17698274-17698325)
chr8 (18-66)||(13754809-13754857)
chr8 (27-84)||(23497137-23497194)
chr8 (22-50)||(7220617-7220645)
chr8 (18-66)||(13765040-13765088)
chr8 (18-50)||(24070903-24070935)
[»] scaffold0360 (1 HSPs)
scaffold0360 (18-84)||(13973-14039)
[»] scaffold0140 (1 HSPs)
scaffold0140 (18-94)||(6349-6425)
[»] scaffold0054 (1 HSPs)
scaffold0054 (13-84)||(68776-68847)
[»] scaffold0023 (1 HSPs)
scaffold0023 (18-163)||(95705-95850)
[»] scaffold0380 (1 HSPs)
scaffold0380 (18-134)||(6784-6900)
[»] scaffold0101 (1 HSPs)
scaffold0101 (25-84)||(10705-10764)
[»] scaffold0057 (1 HSPs)
scaffold0057 (18-104)||(73756-73842)
[»] scaffold0002 (2 HSPs)
scaffold0002 (18-195)||(379767-379943)
scaffold0002 (18-84)||(120985-121051)
[»] scaffold0074 (1 HSPs)
scaffold0074 (18-147)||(35304-35434)
[»] scaffold0505 (1 HSPs)
scaffold0505 (18-50)||(7936-7968)
[»] scaffold0174 (1 HSPs)
scaffold0174 (21-51)||(29285-29315)
[»] scaffold0205 (1 HSPs)
scaffold0205 (19-103)||(22938-23022)


Alignment Details
Target: chr2 (Bit Score: 106; Significance: 4e-53; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 16 - 205
Target Start/End: Original strand, 3586412 - 3586601
Alignment:
Q  16 aaagtgtgtagaaagtgttgtgaaaagtgaatcatgccttgaggatgaagcaagttcacccttgtatagacgcacgttggttataaccgcttccggatta 115  Q
    |||||| |||||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||| ||| ||||||| |||||||||||  | |||    
T  3586412 aaagtgagtagaaagtgttgtgaaaagtgaatcataccttgagggtgaagcaagttcacccttatataggcgcgcgttggtcataaccgcttcttggtta 3586511  T
Q  116 tctggcgtgtgaatagggacagttagaggacatatgtagggtgatcctcgcgcgaaggtgtgctcctgtgtggcgcggtgtacttgagct 205  Q
    |  ||||||||||||||||| ||||||||||| ||||||| ||||||||| ||| ||||||||| |||||||| ||||| |||| |||||    
T  3586512 tgcggcgtgtgaatagggacggttagaggacacatgtaggatgatcctcgtgcggaggtgtgcttctgtgtggtgcggtttactcgagct 3586601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 18 - 194
Target Start/End: Original strand, 15825205 - 15825380
Alignment:
Q  18 agtgtgtagaaagtgttgtgaaaagtgaatcatgccttgaggatgaagcaagttcacccttgtatagacgcacgttggttataaccgcttccggattatc 117  Q
    |||||||||||||||||||||||||| |    | |||||||| |||||||||||||||||||||||| ||| ||||||| |||||||  | ||  ||||     
T  15825205 agtgtgtagaaagtgttgtgaaaagtcatgtgtaccttgagggtgaagcaagttcacccttgtataggcgcgcgttggtcataaccgtcttcgagttatg 15825304  T
Q  118 tggcgtgtgaatagggacagttag-aggacatatgtagggtgatcctcgcgcgaaggtgtgctcctgtgtggcgcggt 194  Q
     ||||||||  || |||| |  || |||||| ||||||||||||||| | ||||||||||||||||||||||| ||||    
T  15825305 cggcgtgtgtttaaggacgg--agtaggacacatgtagggtgatccttgtgcgaaggtgtgctcctgtgtggcacggt 15825380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 36267549 - 36267618
Alignment:
Q  18 agtgtgtagaaagtgttgtgaaaagtgaatcatgccttgaggatgaagcaagttcacccttgtatagacg 87  Q
    ||||||||||||| ||||||||||||||||||| |||||||| |||||||||||||||||| ||||||||    
T  36267549 agtgtgtagaaagggttgtgaaaagtgaatcataccttgagggtgaagcaagttcacccttatatagacg 36267618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 127
Target Start/End: Original strand, 18772299 - 18772408
Alignment:
Q  18 agtgtgtagaaagtgttgtgaaaagtgaatcatgccttgaggatgaagcaagttcacccttgtatagacgcacgttggttataaccgcttccggattatc 117  Q
    ||||||||||||||||||||||||||||      |||||||| |||||||||||||||||| ||||||| ||||||||| ||||| |  ||||||||||     
T  18772299 agtgtgtagaaagtgttgtgaaaagtgacgtgcaccttgagggtgaagcaagttcacccttatatagacacacgttggtcataactgtctccggattatg 18772398  T
Q  118 tggcgtgtga 127  Q
     |||||||||    
T  18772399 cggcgtgtga 18772408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 22 - 90
Target Start/End: Complemental strand, 19919102 - 19919034
Alignment:
Q  22 tgtagaaagtgttgtgaaaagtgaatcatgccttgaggatgaagcaagttcacccttgtatagacgcac 90  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||  |||| ||| ||||| |||||    
T  19919102 tgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaatatcactcttatataggcgcac 19919034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 24499840 - 24499900
Alignment:
Q  18 agtgtgtagaaagtgttgtgaaaagtgaatcatgccttgaggatgaagcaagttcaccctt 78  Q
    |||||||||||| |||||||||||||||||||| |||| ||| ||||||||||||||||||    
T  24499840 agtgtgtagaaaatgttgtgaaaagtgaatcataccttaagggtgaagcaagttcaccctt 24499900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 165
Target Start/End: Complemental strand, 10923205 - 10923059
Alignment:
Q  18 agtgtgtagaaagtgttgtgaaaagtgaatcatgccttgaggatgaagcaagttcacccttgtatagacgcacgttggttataaccgcttccggattatc 117  Q
    ||||||||||||||| |||||||||||||   |||||||||| |||||||||||||||||| |||| |||   |||||| ||||| |  | ||| ||||     
T  10923205 agtgtgtagaaagtgctgtgaaaagtgaagtgtgccttgagggtgaagcaagttcacccttatatacacgtgtgttggtcataacagtcttcggcttatg 10923106  T
Q  118 tggcgtgtgaatagggacagttagaggacatatgtagggtgatcctcg 165  Q
     ||||||||| ||| ||| |  ||||||||  ||||||||||||||||    
T  10923105 cggcgtgtgattagagac-ggaagaggacacgtgtagggtgatcctcg 10923059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 45258190 - 45258126
Alignment:
Q  20 tgtgtagaaagtgttgtgaaaagtgaatcatgccttgaggatgaagcaagttcacccttgtatag 84  Q
    ||||| ||||||||||||||||||||||||| |||||||| ||||||||  |||||||| |||||    
T  45258190 tgtgtcgaaagtgttgtgaaaagtgaatcataccttgagggtgaagcaaagtcacccttatatag 45258126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 12169024 - 12169074
Alignment:
Q  18 agtgtgtagaaagtgttgtgaaaagtgaatcatgccttgaggatgaagcaa 68  Q
    |||||||||||||||||||||||||||||| || |||||||| ||||||||    
T  12169024 agtgtgtagaaagtgttgtgaaaagtgaattataccttgagggtgaagcaa 12169074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 50
Target Start/End: Complemental strand, 12127702 - 12127671
Alignment:
Q  19 gtgtgtagaaagtgttgtgaaaagtgaatcat 50  Q
    ||||||||||||||||||||||||||||||||    
T  12127702 gtgtgtagaaagtgttgtgaaaagtgaatcat 12127671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 15390625 - 15390559
Alignment:
Q  18 agtgtgtagaaagtgttgtgaaaagtgaatcatgccttgaggatgaagcaagttcacccttgtatag 84  Q
    ||||||||  ||||||||||||||||||    | |||||||| |||||||||||||||||| |||||    
T  15390625 agtgtgtaagaagtgttgtgaaaagtgatgtgtaccttgagggtgaagcaagttcacccttatatag 15390559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 66
Target Start/End: Original strand, 24755517 - 24755567
Alignment:
Q  16 aaagtgtgtagaaagtgttgtgaaaagtgaatcatgccttgaggatgaagc 66  Q
    |||||||||||||| |||||||||||||||||| | |||| | ||||||||    
T  24755517 aaagtgtgtagaaattgttgtgaaaagtgaatcgtacctttaagatgaagc 24755567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 18135922 - 18135999
Alignment:
Q  18 agtgtgtagaaagtgttgtgaaaagtgaatcatgccttgaggatgaagcaagttcacccttgtatagacgcacgttgg 95  Q
    ||||||||  ||||||||| ||||||||   || ||| || | |||||||||||||||||| ||||| ||||||||||    
T  18135922 agtgtgtaagaagtgttgtcaaaagtgatgtatacctagaaggtgaagcaagttcacccttatataggcgcacgttgg 18135999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 45715046 - 45715111
Alignment:
Q  18 agtgtgtagaaagtgttgtgaaaagtgaatcatgccttgaggatgaagcaagttcacccttgtata 83  Q
    |||||||| ||||||| ||||||| |||||||| |||||| | |||||| |  |||||||||||||    
T  45715046 agtgtgtaaaaagtgtggtgaaaattgaatcataccttgaaggtgaagctaagtcacccttgtata 45715111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 84
Target Start/End: Original strand, 29711077 - 29711133
Alignment:
Q  28 aagtgttgtgaaaagtgaatcatgccttgaggatgaagcaagttcacccttgtatag 84  Q
    ||||||||||||||||||    | |||||||| |||||||||||||||||| |||||    
T  29711077 aagtgttgtgaaaagtgatgtgtaccttgagggtgaagcaagttcacccttatatag 29711133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 85; Significance: 1e-40; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 18 - 170
Target Start/End: Complemental strand, 2674614 - 2674462
Alignment:
Q  18 agtgtgtagaaagtgttgtgaaaagtgaatcatgccttgaggatgaagcaagttcacccttgtatagacgcacgttggttataaccgcttccggattatc 117  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||  ||| |||||   |||||||  |||||||| |     
T  2674614 agtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagtaagttcacccttatataagcgcgcgttgagcataaccgtctccggattttg 2674515  T
Q  118 tggcgtgtgaatagggacagttagaggacatatgtagggtgatcctcgcgcga 170  Q
     ||||||||| |||||||||||||||||||  |||||||||||||||||||||    
T  2674514 cggcgtgtgattagggacagttagaggacacgtgtagggtgatcctcgcgcga 2674462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 205
Target Start/End: Original strand, 29157151 - 29157340
Alignment:
Q  16 aaagtgtgtagaaagtgttgtgaaaagtgaatcatgccttgaggatgaagcaagttcacccttgtatagacgcacgttggttataaccgcttccggatta 115  Q
    ||||||||||| |||||||||| |||||||| ||| |||||| | ||||| |||||||||||| ||||| ||| ||| |   |||||||  || || |||    
T  29157151 aaagtgtgtagtaagtgttgtgtaaagtgaaccataccttgatggtgaagtaagttcacccttatataggcgcgcgtagaggataaccgtctctgggtta 29157250  T
Q  116 tctggcgtgtgaatagggacagttagaggacatatgtagggtgatcctcgcgcgaaggtgtgctcctgtgtggcgcggtgtacttgagct 205  Q
    |  |||   ||| ||||||| ||||||||||| ||||||| |||||||| ||||  || | ||||||||||||||||||| | |||||||    
T  29157251 tgcggctaatgattagggacggttagaggacacatgtaggatgatcctcacgcggtggcgcgctcctgtgtggcgcggtgcatttgagct 29157340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 12683836 - 12683896
Alignment:
Q  18 agtgtgtagaaagtgttgtgaaaagtgaatcatgccttgaggatgaagcaagttcaccctt 78  Q
    ||||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||    
T  12683836 agtgtgtagaaagtgttgtgaaaagtgaatcataccttaagggtgaagcaagttcaccctt 12683896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 169
Target Start/End: Original strand, 19643753 - 19643903
Alignment:
Q  18 agtgtgtagaaagtgttgtgaaaagtgaatcatgccttgaggatgaagcaagttcacccttgtatagacgcacgttggttataaccgcttccggattatc 117  Q
    |||||||||||||| |||||||||||||||||| |||||||| |||| ||||||||||||| ||||| ||  |||||   |||||||  || |  ||||     
T  19643753 agtgtgtagaaagtcttgtgaaaagtgaatcataccttgagggtgaaacaagttcacccttatataggcgtgcgttgaggataaccgtctctgagttatg 19643852  T
Q  118 tggcgtgtgaatagggacagttagaggacatatgtagggtgatcctcgcgcg 169  Q
     |||||| || ||||||| | ||||||||| || || |||||||||||||||    
T  19643853 cggcgtgagattagggac-ggtagaggacacatataaggtgatcctcgcgcg 19643903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 47253328 - 47253394
Alignment:
Q  18 agtgtgtagaaagtgttgtgaaaagtgaatcatgccttgaggatgaagcaagttcacccttgtatag 84  Q
    |||||||| |||||||||||||||||||||||| |||||||| |||||| |  |||||||| |||||    
T  47253328 agtgtgtaaaaagtgttgtgaaaagtgaatcataccttgagggtgaagctaagtcacccttatatag 47253394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 64
Target Start/End: Original strand, 19809752 - 19809798
Alignment:
Q  18 agtgtgtagaaagtgttgtgaaaagtgaatcatgccttgaggatgaa 64  Q
    |||||||||||||||||||||||||||||| || |||||||| ||||    
T  19809752 agtgtgtagaaagtgttgtgaaaagtgaattataccttgagggtgaa 19809798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 64
Target Start/End: Original strand, 19818744 - 19818790
Alignment:
Q  18 agtgtgtagaaagtgttgtgaaaagtgaatcatgccttgaggatgaa 64  Q
    |||||||||||||||||||||||||||||| || |||||| ||||||    
T  19818744 agtgtgtagaaagtgttgtgaaaagtgaattataccttgatgatgaa 19818790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 84
Target Start/End: Original strand, 5518601 - 5518657
Alignment:
Q  28 aagtgttgtgaaaagtgaatcatgccttgaggatgaagcaagttcacccttgtatag 84  Q
    |||||||||| |||||||  | | |||||||| |||||||||||||||||| |||||    
T  5518601 aagtgttgtggaaagtgatgcgtaccttgagggtgaagcaagttcacccttatatag 5518657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 66; Significance: 3e-29; HSPs: 14)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 18 - 203
Target Start/End: Complemental strand, 26762951 - 26762766
Alignment:
Q  18 agtgtgtagaaagtgttgtgaaaagtgaatcatgccttgaggatgaagcaagttcacccttgtatagacgcacgttggttataaccgcttccggattatc 117  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||||  ||||| | ||||| |||  |||| | |||||| | ||||| || |     
T  26762951 agtgtgtagaaagtgttgtgaaaagtgaatcataccttgagggtgaagcaaggacacccatatataggcgcgtgttgttgataaccacctccgggttttg 26762852  T
Q  118 tggcgtgtgaatagggacagttagaggacatatgtagggtgatcctcgcgcgaaggtgtgctcctgtgtggcgcggtgtacttgag 203  Q
     ||||||||| ||||||| |||||||||||  |||| ||||||||||||||   || ||||| | |||||||| |||| |||||||    
T  26762851 gggcgtgtgattagggacggttagaggacacttgtatggtgatcctcgcgcaggggcgtgctacggtgtggcgtggtgcacttgag 26762766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 200
Target Start/End: Complemental strand, 9135401 - 9135220
Alignment:
Q  18 agtgtgtagaaagtgttgtgaaaagtgaatcatgccttgaggatgaagcaagttcacccttgtatagacgcacgttggttataaccgcttccggattatc 117  Q
    |||||||| ||| |||||||||||||||||||| |||||||| |||||||| ||||||||| ||||||| |   ||||| |||||||  ||||| ||||     
T  9135401 agtgtgtaaaaactgttgtgaaaagtgaatcataccttgagggtgaagcaaattcacccttatatagacacgtattggtcataaccgtctccgggttatg 9135302  T
Q  118 tggcgtgtgaatagggacagttagaggacatatgtagggtgatcctcgcgcgaaggtgtgctcctgtgtggcgcggtgtactt 200  Q
    | |||||||| ||||||| |   ||||||| ||||| ||||||||||| |||  || | ||| ||||| ||| ||||||||||    
T  9135301 tagcgtgtgattagggac-ggaggaggacacatgtaaggtgatcctcgtgcgggggcgcgcttctgtgcggcacggtgtactt 9135220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 170
Target Start/End: Original strand, 5863238 - 5863390
Alignment:
Q  18 agtgtgtagaaagtgttgtgaaaagtgaatcatgccttgaggatgaagcaagttcacccttgtatagacgcacgttggttataaccgcttccggattatc 117  Q
    |||||||||||| |||||| ||||||||||||| |||||||| || |||||  |||||||||||||| ||| ||||||  |||||||| ||||| ||       
T  5863238 agtgtgtagaaaatgttgtaaaaagtgaatcataccttgagggtggagcaatgtcacccttgtataggcgcgcgttggaaataaccgcctccgggtttca 5863337  T
Q  118 tggcgtgtgaatagggacagttagaggacatatgtagggtgatcctcgcgcga 170  Q
     ||| ||||| ||||||| |||||||||||  ||||  |||||||||| ||||    
T  5863338 cggcatgtgattagggacggttagaggacacgtgtaacgtgatcctcgtgcga 5863390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 194
Target Start/End: Complemental strand, 13292163 - 13291988
Alignment:
Q  18 agtgtgtagaaagtgttgtgaaaagtgaatcatgccttgaggatgaagcaagttcacccttgtatagacgcacgttggttataaccgcttccggattatc 117  Q
    ||||||||  ||||||||||||||||||    | |||||||| ||||||||||||||| || ||||| ||| ||||||  |||||||  ||||| ||||     
T  13292163 agtgtgtaagaagtgttgtgaaaagtgatgtgtaccttgagggtgaagcaagttcaccattatataggcgcgcgttggccataaccgtctccgggttatg 13292064  T
Q  118 tggcgtgtgaatagggacagttag-aggacatatgtagggtgatcctcgcgcgaaggtgtgctcctgtgtggcgcggt 194  Q
     ||||||||  ||||||| |  || | ||||  |||||||||||||| ||||||||| | ||||||||||||| ||||    
T  13292063 cggcgtgtggttagggacgg--agcatgacacgtgtagggtgatccttgcgcgaaggcgcgctcctgtgtggcacggt 13291988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 147
Target Start/End: Original strand, 39879438 - 39879568
Alignment:
Q  18 agtgtgtagaaagtgttgtgaaaagtgaatcatgccttga-ggatgaagcaagttcacccttgtatagacgcacgttggttataaccgcttccggattat 116  Q
    |||||||| |||||||||| |||||||||||||||| ||| ||  |||||||  |||||||| ||||||||||| ||||  |||||||| |||| ||| |    
T  39879438 agtgtgtaaaaagtgttgtaaaaagtgaatcatgccatgaggggggaagcaatgtcacccttatatagacgcacattggaaataaccgcctccgaatttt 39879537  T
Q  117 ctggcgtgtgaatagggacagttagaggaca 147  Q
      ||||||||| |||| ||| || |||||||    
T  39879538 gcggcgtgtgattaggaacatttggaggaca 39879568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 104
Target Start/End: Original strand, 12644834 - 12644923
Alignment:
Q  16 aaagtgtgtagaaagtgttg-tgaaaagtgaatcatgccttgaggatgaagcaagttcacccttgtatagacgcacgttggttataaccg 104  Q
    ||||||||| |||||||||| ||||||||||||  | | |||||| ||||||||||||||||||||| || ||| ||||||| |||||||    
T  12644834 aaagtgtgtggaaagtgttggtgaaaagtgaattgtacgttgagggtgaagcaagttcacccttgtagaggcgcgcgttggtcataaccg 12644923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 16204337 - 16204408
Alignment:
Q  13 gagaaagtgtgtagaaagtgttgtgaaaagtgaatcatgccttgaggatgaagcaagttcacccttgtatag 84  Q
    |||| |||||||| |||||||||||||||||||| ||| |||| ||| ||||| || ||||||||| |||||    
T  16204337 gagagagtgtgtataaagtgttgtgaaaagtgaaccataccttaagggtgaagaaaattcacccttatatag 16204408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 29373497 - 29373556
Alignment:
Q  18 agtgtgtagaaagtgttgtgaaaagtgaatcatgccttgaggatgaagcaagttcaccct 77  Q
    |||||||||||| ||||||||||| |||||||| |||||||| ||||||||  |||||||    
T  29373497 agtgtgtagaaaatgttgtgaaaattgaatcataccttgagggtgaagcaatgtcaccct 29373556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 84
Target Start/End: Complemental strand, 43172065 - 43172010
Alignment:
Q  29 agtgttgtgaaaagtgaatcatgccttgaggatgaagcaagttcacccttgtatag 84  Q
    |||||||||||||||||||||| | |||||| |||||||| ||||||||| |||||    
T  43172065 agtgttgtgaaaagtgaatcatacattgagggtgaagcaacttcacccttatatag 43172010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 78
Target Start/End: Original strand, 7486598 - 7486656
Alignment:
Q  20 tgtgtagaaagtgttgtgaaaagtgaatcatgccttgaggatgaagcaagttcaccctt 78  Q
    ||||||||| ||||||||||||||||||||| |||| | | ||||| ||||||||||||    
T  7486598 tgtgtagaaggtgttgtgaaaagtgaatcatcccttaaaggtgaagaaagttcaccctt 7486656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 134
Target Start/End: Complemental strand, 16987132 - 16987016
Alignment:
Q  18 agtgtgtagaaagtgttgtgaaaagtgaatcatgccttgaggatgaagcaagttcacccttgtatagacgcacgttggttataaccgcttccggattatc 117  Q
    ||||||||  ||||||||||||||||||    | |||| | | |||||||||||||||||| ||||| ||| ||||||  |||||||  ||||||||||     
T  16987132 agtgtgtaagaagtgttgtgaaaagtgatgtgtcccttaaaggtgaagcaagttcacccttatataggcgcgcgttggccataaccgtctccggattatg 16987033  T
Q  118 tggcgtgtgaataggga 134  Q
     || |||||| ||||||    
T  16987032 cggtgtgtgattaggga 16987016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 50
Target Start/End: Original strand, 21161293 - 21161324
Alignment:
Q  19 gtgtgtagaaagtgttgtgaaaagtgaatcat 50  Q
    ||||||||||||||||||||||||||||||||    
T  21161293 gtgtgtagaaagtgttgtgaaaagtgaatcat 21161324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 60
Target Start/End: Complemental strand, 9867975 - 9867937
Alignment:
Q  22 tgtagaaagtgttgtgaaaagtgaatcatgccttgagga 60  Q
    ||||||||||||||| ||||||||||||| |||||||||    
T  9867975 tgtagaaagtgttgttaaaagtgaatcataccttgagga 9867937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 84
Target Start/End: Complemental strand, 12265156 - 12265099
Alignment:
Q  27 aaagtgttgtgaaaagtgaatcatgccttgaggatgaagcaagttcacccttgtatag 84  Q
    |||||||||||||||||||  | | |||||||| | |||||||||||||||| |||||    
T  12265156 aaagtgttgtgaaaagtgatgcgtaccttgagggtcaagcaagttcacccttatatag 12265099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 66; Significance: 3e-29; HSPs: 15)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 21 - 114
Target Start/End: Original strand, 16704456 - 16704549
Alignment:
Q  21 gtgtagaaagtgttgtgaaaagtgaatcatgccttgaggatgaagcaagttcacccttgtatagacgcacgttggttataaccgcttccggatt 114  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||| ||| ||||||| |||||||| ||||||||    
T  16704456 gtgtagaaagtgttgtgaaaagtgaatcataccttgagggtgaagcaagttcacccttatataggcgcgcgttggtgataaccgcctccggatt 16704549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 9801124 - 9801058
Alignment:
Q  18 agtgtgtagaaagtgttgtgaaaagtgaatcatgccttgaggatgaagcaagttcacccttgtatag 84  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||||||  |||||||| |||||    
T  9801124 agtgtgtagaaagtgttgtgaaaagtgaatcataccttgagggtgaagcaatgtcacccttatatag 9801058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 169
Target Start/End: Original strand, 1770876 - 1771025
Alignment:
Q  18 agtgtgtagaaagtgttgtgaaaagtgaatcat--gccttgaggatgaagcaagttcacccttgtatagacgcacgttggttataaccgcttccggatta 115  Q
    ||||||||||||||||||||||||||| |||||  |||||||||||||||||||||| ||||| |||||  || |||||   |||||||  |||| ||||    
T  1770876 agtgtgtagaaagtgttgtgaaaagtg-atcatgcgccttgaggatgaagcaagttcgcccttatataggtgcgcgttgtgcataaccgtctccgaatta 1770974  T
Q  116 tctggcgtgtgaatagggacagttagaggacatatgtagggtgatcctcgcgcg 169  Q
    |  ||||| ||| ||||||| | ||||||||  | ||| |||||||||||||||    
T  1770975 tgcggcgtatgattagggac-gatagaggac--acgtaaggtgatcctcgcgcg 1771025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 88
Target Start/End: Complemental strand, 2311872 - 2311804
Alignment:
Q  20 tgtgtagaaagtgttgtgaaaagtgaatcatgccttgaggatgaagcaagttcacccttgtatagacgc 88  Q
    ||||||||||||||||||||| ||||||||| |||||||| ||||||||  |||||||| | |||||||    
T  2311872 tgtgtagaaagtgttgtgaaaggtgaatcataccttgagggtgaagcaatgtcacccttatttagacgc 2311804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 83
Target Start/End: Original strand, 20622468 - 20622524
Alignment:
Q  27 aaagtgttgtgaaaagtgaatcatgccttgaggatgaagcaagttcacccttgtata 83  Q
    |||||| ||||||||||||||||| |||||||| |||||||||||||||||| ||||    
T  20622468 aaagtggtgtgaaaagtgaatcataccttgagggtgaagcaagttcacccttatata 20622524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 17143789 - 17143724
Alignment:
Q  18 agtgtgtagaaagtgttgtgaaaagtgaatcatgccttgaggatgaagcaagttcacccttgtata 83  Q
    ||||||||||||||||||||||||||||||||| ||||| || |||| |||  |||||||| ||||    
T  17143789 agtgtgtagaaagtgttgtgaaaagtgaatcataccttgggggtgaaacaacatcacccttatata 17143724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 28715528 - 28715468
Alignment:
Q  18 agtgtgtagaaagtgttgtgaaaagtgaatcatgccttgaggatgaagcaagttcaccctt 78  Q
    |||||||| |||||||||||||||||||||||| |||||||| |||| |||  ||||||||    
T  28715528 agtgtgtataaagtgttgtgaaaagtgaatcataccttgagggtgaaacaatatcaccctt 28715468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 30606979 - 30607054
Alignment:
Q  18 agtgtgtagaaagtgttgtgaaaagtgaatcatgccttgaggatgaagcaagttcacccttgtatagacgcacgtt 93  Q
    |||| ||||||||||||||||||||||||| || |||||||| ||||| |||  ||||||| ||||| ||| ||||    
T  30606979 agtgagtagaaagtgttgtgaaaagtgaattataccttgagggtgaagtaaggccacccttatataggcgcgcgtt 30607054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 21342327 - 21342261
Alignment:
Q  18 agtgtgtagaaagtgttgtgaaaagtgaatcatgccttgaggatgaagcaagttcacccttgtatag 84  Q
    ||||| ||||||||||||||||||||||||||| | |||||| ||||| ||| | |||||| |||||    
T  21342327 agtgtatagaaagtgttgtgaaaagtgaatcatacattgagggtgaagtaaggttacccttatatag 21342261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 78
Target Start/End: Complemental strand, 8122947 - 8122895
Alignment:
Q  26 gaaagtgttgtgaaaagtgaatcatgccttgaggatgaagcaagttcaccctt 78  Q
    ||||| ||||||||||||||||||| |||||||| ||||||||  ||||||||    
T  8122947 gaaagcgttgtgaaaagtgaatcataccttgagggtgaagcaatgtcaccctt 8122895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 166
Target Start/End: Complemental strand, 9801024 - 9800977
Alignment:
Q  119 ggcgtgtgaatagggacagttagaggacatatgtagggtgatcctcgc 166  Q
    ||||||||| ||||||| ||||||||||| ||||||||||| ||||||    
T  9801024 ggcgtgtgattagggacggttagaggacacatgtagggtgaccctcgc 9800977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 135
Target Start/End: Original strand, 12108504 - 12108587
Alignment:
Q  52 ccttgaggatgaagcaagttcacccttgtatagacgcacgttggttataaccgcttccggattatctggcgtgtgaatagggac 135  Q
    |||||||| |||||||||||||||||| ||||| | | ||||||| ||||| || ||||| ||||  ||| ||||| |||||||    
T  12108504 ccttgagggtgaagcaagttcacccttatataggcacgcgttggtcataacggcctccgggttatgcggcttgtgattagggac 12108587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 61 - 132
Target Start/End: Original strand, 25496032 - 25496103
Alignment:
Q  61 tgaagcaagttcacccttgtatagacgcacgttggttataaccgcttccggattatctggcgtgtgaatagg 132  Q
    |||||||||||||||||| ||||| ||||||||| | |||||||  ||||| ||||  ||||||||| ||||    
T  25496032 tgaagcaagttcacccttatataggcgcacgttgatcataaccgtctccgggttatgcggcgtgtgattagg 25496103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 84
Target Start/End: Complemental strand, 7835610 - 7835548
Alignment:
Q  22 tgtagaaagtgttgtgaaaagtgaatcatgccttgaggatgaagcaagttcacccttgtatag 84  Q
    ||||||||||||||||||||||||  | |  ||||| ||||||||||||||| |||| |||||    
T  7835610 tgtagaaagtgttgtgaaaagtgatacgtatcttgatgatgaagcaagttcatccttttatag 7835548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 84
Target Start/End: Complemental strand, 14860129 - 14860073
Alignment:
Q  28 aagtgttgtgaaaagtgaatcatgccttgaggatgaagcaagttcacccttgtatag 84  Q
    ||||||||||||||||||    | |||||||| |||||||||||||||||| |||||    
T  14860129 aagtgttgtgaaaagtgatgtgtaccttgagggtgaagcaagttcacccttatatag 14860073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 64; Significance: 4e-28; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 18 - 169
Target Start/End: Complemental strand, 32418526 - 32418375
Alignment:
Q  18 agtgtgtagaaagtgttgtgaaaagtgaatcatgccttgaggatgaagcaagttcacccttgtatagacgcacgttggttataaccgcttccggattatc 117  Q
    |||||||||| ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||  ||||     |||| |  ||||| ||||     
T  32418526 agtgtgtagagagtgttgtgaagagtgaatcataccttgaggatgaagcaagttcacccttgtatagacgtgcgttaagcttaactgtctccgggttatg 32418427  T
Q  118 tggcgtgtgaatagggacagttagaggacatatgtagggtgatcctcgcgcg 169  Q
     ||||||||| ||||||  ||||| |||||  ||||||||||||||||||||    
T  32418426 cggcgtgtgattagggatggttaggggacacgtgtagggtgatcctcgcgcg 32418375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 22903144 - 22903209
Alignment:
Q  18 agtgtgtagaaagtgttgtgaaaagtgaatcatgccttgaggatgaagcaagttcacccttgtata 83  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||| |||  |||||||| ||||    
T  22903144 agtgtgtagaaagtgttgtgaaaagtgaatcataccttgagggtgaaacaatatcacccttatata 22903209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 20025334 - 20025394
Alignment:
Q  18 agtgtgtagaaagtgttgtgaaaagtgaatcatgccttgaggatgaagcaagttcaccctt 78  Q
    |||||||||||||||||||| |||||||||||| |||||||| |||||| || ||||||||    
T  20025334 agtgtgtagaaagtgttgtgtaaagtgaatcattccttgagggtgaagctaggtcaccctt 20025394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 26994646 - 26994570
Alignment:
Q  18 agtgtgtagaaagtgttgtgaaaagtgaatcatgccttgaggatgaagcaagttcacccttgtatagacgcacgttg 94  Q
    ||||| ||||| ||||||||||||||||||||| ||||| || ||||||||| |||||||| ||||| ||| |||||    
T  26994646 agtgtttagaaggtgttgtgaaaagtgaatcataccttgggggtgaagcaaggtcacccttatataggcgcgcgttg 26994570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 83
Target Start/End: Original strand, 25333780 - 25333851
Alignment:
Q  12 agagaaagtgtgtagaaagtgttgtgaaaagtgaatcatgccttgaggatgaagcaagttcacccttgtata 83  Q
    ||||| ||||||||||||||||||| ||||||||||||| | |||||  |||||||||||||| ||| ||||    
T  25333780 agagagagtgtgtagaaagtgttgttaaaagtgaatcatactttgagagtgaagcaagttcactcttatata 25333851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 18 - 65
Target Start/End: Complemental strand, 27083278 - 27083231
Alignment:
Q  18 agtgtgtagaaagtgttgtgaaaagtgaatcatgccttgaggatgaag 65  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||    
T  27083278 agtgtgtagaaagtgttgtgaaaagtgaatcataccttgagggtgaag 27083231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 64
Target Start/End: Original strand, 34493561 - 34493610
Alignment:
Q  15 gaaagtgtgtagaaagtgttgtgaaaagtgaatcatgccttgaggatgaa 64  Q
    ||||| |||||||||||||||||||||||||||||| |||||||| ||||    
T  34493561 gaaagagtgtagaaagtgttgtgaaaagtgaatcataccttgagggtgaa 34493610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 116
Target Start/End: Original strand, 22865810 - 22865910
Alignment:
Q  16 aaagtgtgtagaaagtgttgtgaaaagtgaatcatgccttgaggatgaagcaagttcacccttgtatagacgcacgttggttataaccgcttccggatta 115  Q
    ||||||||||  || |||||||||||||||    | |||||||| |||||||||||||||||| ||||| ||  ||||||  ||||||| ||||||||||    
T  22865810 aaagtgtgtaagaaatgttgtgaaaagtgatgtgtaccttgagggtgaagcaagttcacccttatataggcgtgcgttggccataaccgtttccggatta 22865909  T
Q  116 t 116  Q
    |    
T  22865910 t 22865910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 52 - 104
Target Start/End: Complemental strand, 31202381 - 31202329
Alignment:
Q  52 ccttgaggatgaagcaagttcacccttgtatagacgcacgttggttataaccg 104  Q
    |||||||| |||||||||||||||||| ||||| ||||||||||| |||||||    
T  31202381 ccttgagggtgaagcaagttcacccttatataggcgcacgttggtcataaccg 31202329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 195
Target Start/End: Original strand, 24546442 - 24546569
Alignment:
Q  67 aagttcacccttgtatagacgcacgttggttataaccgcttccggattatctggcgtgtgaatagggacagttag-aggacatatgtagggtgatcctcg 165  Q
    |||||||||||| ||||| ||| |||| |  |||||||  ||||| ||||  ||||||||| ||||||| |  || | ||||  |||||||||||||| |    
T  24546442 aagttcacccttatataggcgcgcgttagccataaccgtctccgggttatgcggcgtgtgattagggacgg--agcaagacacgtgtagggtgatccttg 24546539  T
Q  166 cgcgaaggtgtgctcctgtgtggcgcggtg 195  Q
    |||| ||||| ||||||||||||| |||||    
T  24546540 cgcggaggtgcgctcctgtgtggcacggtg 24546569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 24647339 - 24647405
Alignment:
Q  18 agtgtgtagaaagtgttgtgaaaagtgaatcatgccttgaggatgaagcaagttcacccttgtatag 84  Q
    ||||||||  ||||||||||||||||||   || |||| ||| |||||||||||||||||| |||||    
T  24647339 agtgtgtaagaagtgttgtgaaaagtgatgtataccttaagggtgaagcaagttcacccttatatag 24647405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 84
Target Start/End: Original strand, 25537466 - 25537522
Alignment:
Q  28 aagtgttgtgaaaagtgaatcatgccttgaggatgaagcaagttcacccttgtatag 84  Q
    ||||||||||||||||||   || |||||||| ||||| |||||||||||| |||||    
T  25537466 aagtgttgtgaaaagtgatgtataccttgagggtgaagaaagttcacccttatatag 25537522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 59; Significance: 4e-25; HSPs: 2)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 24 - 166
Target Start/End: Complemental strand, 15464 - 15323
Alignment:
Q  24 tagaaagtgttgtgaaaagtgaatcatgccttgaggatgaagcaagttcacccttgtatagacgcacgttggttataaccgcttccggattatctggcgt 123  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||||||||||| |||||  ||||||| || |||||||  ||||||||||  | | |    
T  15464 tagaaagtgttgtgaaaagtgaatcataccttgagggtgaagcaagttcacccttatataggtgcacgttagtcataaccgtgtccggattatgcgacat 15365  T
Q  124 gtgaatagggacagttagaggacatatgtagggtgatcctcgc 166  Q
    |||| ||||||||    ||||||| ||||| ||||||||||||    
T  15364 gtgattagggaca-aaggaggacacatgtaaggtgatcctcgc 15323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 64
Target Start/End: Complemental strand, 8617 - 8571
Alignment:
Q  18 agtgtgtagaaagtgttgtgaaaagtgaatcatgccttgaggatgaa 64  Q
    ||||||||||||||||||||||||||||||||| |||| ||| ||||    
T  8617 agtgtgtagaaagtgttgtgaaaagtgaatcataccttaagggtgaa 8571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 57; Significance: 6e-24; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 30 - 166
Target Start/End: Original strand, 11087565 - 11087701
Alignment:
Q  30 gtgttgtgaaaagtgaatcatgccttgaggatgaagcaagttcacccttgtatagacgcacgttggttataaccgcttccggattatctggcgtgtgaat 129  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||  || |||||   ||||| |  ||||||||||  ||||||| | |    
T  11087565 gtgttgtgaaaagtgaatcataccttgaggatgaaacaagttcacccttatataggtgcgcgttgagcataactgtctccggattatgcggcgtgtaatt 11087664  T
Q  130 agggacagttagaggacatatgtagggtgatcctcgc 166  Q
    | |||| |||||||||||  |||||||||||||||||    
T  11087665 aaggacggttagaggacacgtgtagggtgatcctcgc 11087701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 169
Target Start/End: Original strand, 33596910 - 33597063
Alignment:
Q  16 aaagtgtgtagaaagtgttgtgaaaagtgaatcatgccttgaggatgaagcaagttcacccttgtatagacgcacgttggttataaccgcttccggatta 115  Q
    ||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||| ||| ||||| ||| | |||   ||||  |   ||||||||    
T  33596910 aaagtgtgtagaaagtgttgtgaaaatggaatcataccttgaggatgaagcaagttcactcttatataggcgcgctttgagcataattgtcaccggatta 33597009  T
Q  116 tctggcgtgtgaatagggacagttagaggacatatgtagggtgatcctcgcgcg 169  Q
    |  ||||| ||| ||||| | ||||||||||| ||||||| ||| |||||||||    
T  33597010 tgcggcgtatgattaggggcggttagaggacacatgtaggatgaccctcgcgcg 33597063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 22 - 165
Target Start/End: Complemental strand, 31423873 - 31423731
Alignment:
Q  22 tgtagaaagtgttgtgaaaagtgaatcatgccttgaggatgaagcaagttcacccttgtatagacgcacgttggttataaccgcttccggattatctggc 121  Q
    ||||||||||||||||| |||||||||||| ||||||| |||||||||| ||||||| ||||| |||  |||||  || ||||  ||||| ||||  | |    
T  31423873 tgtagaaagtgttgtgagaagtgaatcatgtcttgagggtgaagcaagtgcacccttatataggcgcgtgttgggcat-accgtgtccgggttatgcgac 31423775  T
Q  122 gtgtgaatagggacagttagaggacatatgtagggtgatcctcg 165  Q
    ||||||   |||||| |||||||||| |||||||||||||||||    
T  31423774 gtgtgatcggggacaattagaggacacatgtagggtgatcctcg 31423731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 18 - 180
Target Start/End: Original strand, 18147357 - 18147519
Alignment:
Q  18 agtgtgtagaaagtgttgtgaaaagtgaatcatgccttgaggatgaagcaagttcacccttgtatagacgcacgttggttataaccgcttccggattatc 117  Q
    |||||||||||||||||||||||||||| |||| |||| ||| ||||||||  |||||||| |||||  || | ||||   ||||||| || || || |     
T  18147357 agtgtgtagaaagtgttgtgaaaagtgactcatacctttagggtgaagcaatgtcacccttatataggtgcgcattgggattaaccgcctctgggttttg 18147456  T
Q  118 tggcgtgtgaatagggacagttagaggacatatgtagggtgatcctcgcgcgaaggtgtgctc 180  Q
      |||||||| ||||||| |||||||||||| |||| ||||||||||||  || |||||||||    
T  18147457 cagcgtgtgattagggacggttagaggacatgtgtaaggtgatcctcgcatgagggtgtgctc 18147519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 204
Target Start/End: Complemental strand, 689896 - 689712
Alignment:
Q  19 gtgtgtagaaagtgttgtgaaaagtgaatcatgccttgaggatgaagcaagttcacccttgtatagacgcacgttggttataaccgcttccggattatct 118  Q
    ||||||| |||||||||||||||||||||| | |||||||| || | |||| |||||||| ||||| ||||||||| | |||| ||  ||||  || |      
T  689896 gtgtgtataaagtgttgtgaaaagtgaatcgtaccttgaggctg-atcaaggtcacccttatataggcgcacgttgatcataatcgtctccgagttttgc 689798  T
Q  119 ggcgtgtgaatagggacagttagaggacatatgtagggtgatcctcgcgcgaaggtgtgctcctgtgtggcgcggtgtacttgagc 204  Q
    ||||||||| || |||||||||||||| |  || |||||| ||||||||||  |  |||||| |||||||| ||||| ||||||||    
T  689797 ggcgtgtgattaaggacagttagaggatacgtgaagggtggtcctcgcgcggggacgtgctcttgtgtggcacggtgcacttgagc 689712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 19305515 - 19305575
Alignment:
Q  18 agtgtgtagaaagtgttgtgaaaagtgaatcatgccttgaggatgaagcaagttcaccctt 78  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||    
T  19305515 agtgtgtagaaagtgttgtgaaaagtgaatcataccttgagggtgaagcaaggtcaccctt 19305575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 147
Target Start/End: Complemental strand, 15480383 - 15480252
Alignment:
Q  16 aaagtgtgtagaaagtgttgtgaaaagtgaatcatgccttgaggatgaagcaagttcacccttgtatagacgcacgttggttataaccgcttccggatta 115  Q
    ||||||||||||||||||||||||||||||||||| |||||||  |||||| |  |||||||| |||||  ||| |||||  |||||||| ||| ||||     
T  15480383 aaagtgtgtagaaagtgttgtgaaaagtgaatcataccttgagagtgaagctaagtcacccttatataggtgcatgttggaaataaccgcatccagattt 15480284  T
Q  116 tctggcgtgtgaatagggacagttagaggaca 147  Q
    |  ||| ||||| |||||||| ||||| ||||    
T  15480283 tacggcatgtgattagggacaattagaagaca 15480252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 20148361 - 20148432
Alignment:
Q  13 gagaaagtgtgtagaaagtgttgtgaaaagtgaatcatgccttgaggatgaagcaagttcacccttgtatag 84  Q
    ||||||| |||||||||||||||||||||||||||||| |||||| | ||||||||| |||||||| |||||    
T  20148361 gagaaagagtgtagaaagtgttgtgaaaagtgaatcataccttgatggtgaagcaaggtcacccttatatag 20148432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 22184467 - 22184396
Alignment:
Q  13 gagaaagtgtgtagaaagtgttgtgaaaagtgaatcatgccttgaggatgaagcaagttcacccttgtatag 84  Q
    ||||||| |||||||||||||||||||||||||||||| |||||| | ||||||||| |||||||| |||||    
T  22184467 gagaaagagtgtagaaagtgttgtgaaaagtgaatcataccttgatggtgaagcaaggtcacccttatatag 22184396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 17380148 - 17380292
Alignment:
Q  18 agtgtgtagaaagtgttgtgaaaagtgaatcatgccttgaggatgaagcaagttcacccttgtatagacgcacgttggttataaccgcttccggattatc 117  Q
    |||||| | |||||||||||||||||||||| | |||| ||| ||| ||||| |||||||| ||||| ||  ||||||  |||||||| ||  | || |     
T  17380148 agtgtgaataaagtgttgtgaaaagtgaatcttaccttcaggttgacgcaaggtcacccttatataggcgtgcgttgggaataaccgcctctaggtttta 17380247  T
Q  118 tggcgtgtgaatagggacagttagaggacatatgtagggtgatcc 162  Q
    |||||||||| |||| |||||||||||| | | ||| ||||||||    
T  17380248 tggcgtgtgattaggaacagttagaggaaacaagtaaggtgatcc 17380292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 18 - 165
Target Start/End: Original strand, 22572095 - 22572242
Alignment:
Q  18 agtgtgtagaaagtgttgtgaaaagtgaatcatgccttgaggatgaagcaagttcacccttgtatagacgcacgttggttataaccgcttccggattatc 117  Q
    ||||||||||| |||||||| ||||||||||||  ||||||| ||||||||||||||| || ||| | ||| |||||   |||||||  ||| | ||||     
T  22572095 agtgtgtagaaggtgttgtgtaaagtgaatcatatcttgagggtgaagcaagttcacctttatattggcgcgcgttgagcataaccgtctccaggttatg 22572194  T
Q  118 tggcgtgtgaatagggacagttagaggacatatgtagggtgatcctcg 165  Q
     |  || ||| ||||||| |||||||||||  ||| ||||||||||||    
T  22572195 cgaagtatgattagggacggttagaggacacgtgtggggtgatcctcg 22572242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 65
Target Start/End: Complemental strand, 3404902 - 3404855
Alignment:
Q  18 agtgtgtagaaagtgttgtgaaaagtgaatcatgccttgaggatgaag 65  Q
    |||||||||||||||||||||||| |||||||| |||||||| |||||    
T  3404902 agtgtgtagaaagtgttgtgaaaaatgaatcataccttgagggtgaag 3404855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 84
Target Start/End: Original strand, 16131026 - 16131085
Alignment:
Q  25 agaaagtgttgtgaaaagtgaatcatgccttgaggatgaagcaagttcacccttgtatag 84  Q
    |||||||||||||||| ||||||||| |||||||| |||| |||||| |||||| |||||    
T  16131026 agaaagtgttgtgaaacgtgaatcataccttgagggtgaaacaagtttacccttatatag 16131085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 68
Target Start/End: Original strand, 30681046 - 30681093
Alignment:
Q  21 gtgtagaaagtgttgtgaaaagtgaatcatgccttgaggatgaagcaa 68  Q
    |||||||| || |||||||||||||||||| |||||||||||||||||    
T  30681046 gtgtagaatgtattgtgaaaagtgaatcataccttgaggatgaagcaa 30681093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 104
Target Start/End: Complemental strand, 19277116 - 19277030
Alignment:
Q  18 agtgtgtagaaagtgttgtgaaaagtgaatcatgccttgaggatgaagcaagttcacccttgtatagacgcacgttggttataaccg 104  Q
    ||||||||  ||||||||||||||||||    | |||||||| |||||||||||||||||| ||||| ||| | ||||| |||||||    
T  19277116 agtgtgtaagaagtgttgtgaaaagtgatgtgtaccttgagggtgaagcaagttcacccttatataggcgcgctttggtcataaccg 19277030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 34573036 - 34572987
Alignment:
Q  16 aaagtgtgtagaaagtgttgtgaaaagtgaatcatgccttgaggatgaag 65  Q
    |||||||||||||||||| |||||||||||||||| | |||||| |||||    
T  34573036 aaagtgtgtagaaagtgtggtgaaaagtgaatcatacattgagggtgaag 34572987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 65
Target Start/End: Complemental strand, 12203674 - 12203631
Alignment:
Q  22 tgtagaaagtgttgtgaaaagtgaatcatgccttgaggatgaag 65  Q
    ||||||||||||||||||||||||||||| | |||||| |||||    
T  12203674 tgtagaaagtgttgtgaaaagtgaatcatactttgagggtgaag 12203631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 188
Target Start/End: Original strand, 34064246 - 34064415
Alignment:
Q  18 agtgtgtagaaagtgttgtgaaaagtgaatcatgccttgaggatgaagcaagttcacccttgtatagacgcacgttggttataaccgcttccggattatc 117  Q
    ||||||||  ||||||||||||||||||    | |||||||| |||||||||||||||||| ||||| |||  |||||  |||||||   |||| ||||     
T  34064246 agtgtgtaagaagtgttgtgaaaagtgatgtgtaccttgagggtgaagcaagttcacccttatataggcgcgagttggccataaccgtcaccgggttatg 34064345  T
Q  118 tggcgtgtgaatagggac--agttagaggacatatgtagggtgatcctcgcgcgaaggtgtgctcctgtgtgg 188  Q
     |||  |||| ||||| |  |||   |||||| ||||| ||||||||| ||||||||| | ||||||||||||    
T  34064346 cggcacgtgattaggggcgaagt---aggacacatgtatggtgatccttgcgcgaaggcgcgctcctgtgtgg 34064415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 50
Target Start/End: Original strand, 14080534 - 14080566
Alignment:
Q  18 agtgtgtagaaagtgttgtgaaaagtgaatcat 50  Q
    ||||||||| |||||||||||||||||||||||    
T  14080534 agtgtgtagtaagtgttgtgaaaagtgaatcat 14080566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 50
Target Start/End: Original strand, 14268482 - 14268514
Alignment:
Q  18 agtgtgtagaaagtgttgtgaaaagtgaatcat 50  Q
    ||||||||||||||||| |||||||||||||||    
T  14268482 agtgtgtagaaagtgttttgaaaagtgaatcat 14268514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 4e-22; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 205
Target Start/End: Original strand, 22414824 - 22415013
Alignment:
Q  16 aaagtgtgtagaaagtgttgtgaaaagtgaatcatgccttgaggatgaagcaagttcacccttgtatagacgcacgttggttataaccgcttccggatta 115  Q
    |||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||| |||||||||| |   ||| |   ||||| |  ||||  |||    
T  22414824 aaagtgtgtagaaagtgttgtgaaaagtgaatcatatcttgagggtgaagcaagttcatccttgtataggcatgcgtcgagcataacggtctccgtgtta 22414923  T
Q  116 tctggcgtgtgaatagggacagttagaggacatatgtagggtgatcctcgcgcgaaggtgtgctcctgtgtggcgcggtgtacttgagct 205  Q
    |  ||||| ||| || ||||||||||| |||| ||||| |||||||||| |||   |||| |||  |||||||||| ||| |||||||||    
T  22414924 tgcggcgtatgattatggacagttagatgacacatgtaaggtgatcctcacgcaggggtgcgcttatgtgtggcgcagtgcacttgagct 22415013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 12177437 - 12177503
Alignment:
Q  18 agtgtgtagaaagtgttgtgaaaagtgaatcatgccttgaggatgaagcaagttcacccttgtatag 84  Q
    |||||||||||||||||||||||||||||| || ||||||||| |||||||||||| |||| |||||    
T  12177437 agtgtgtagaaagtgttgtgaaaagtgaattataccttgaggaggaagcaagttcaaccttatatag 12177503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 164
Target Start/End: Original strand, 16050445 - 16050591
Alignment:
Q  18 agtgtgtagaaagtgttgtgaaaagtgaatcatgccttgaggatgaagcaagttcacccttgtatagacgcacgttggttataaccgcttccggattatc 117  Q
    |||||||||||||||| |||||||||||| ||| |||||||||||||||||   ||||||| |||||  || | ||||  ||||    ||||||||| |     
T  16050445 agtgtgtagaaagtgtggtgaaaagtgaaccataccttgaggatgaagcaatgccacccttatataggtgcgcattgggaataaatcattccggattttg 16050544  T
Q  118 tggcgtgtgaatagggacagttagaggacatatgtagggtgatcctc 164  Q
     || |||||| ||  |||||||||||||||  |||||||||||||||    
T  16050545 cggtgtgtgattaaagacagttagaggacacgtgtagggtgatcctc 16050591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 75
Target Start/End: Complemental strand, 23280307 - 23280245
Alignment:
Q  13 gagaaagtgtgtagaaagtgttgtgaaaagtgaatcatgccttgaggatgaagcaagttcacc 75  Q
    ||||||||||||  | ||||||||||||||||||| ||||| ||||| |||||||||||||||    
T  23280307 gagaaagtgtgtgtatagtgttgtgaaaagtgaataatgccatgagggtgaagcaagttcacc 23280245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 26977791 - 26977857
Alignment:
Q  18 agtgtgtagaaagtgttgtgaaaagtgaatcatgccttgaggatgaagcaagttcacccttgtatag 84  Q
    |||||||||||||| ||||||||| |||||||| |||||||| |||||||| || |||||| |||||    
T  26977791 agtgtgtagaaagtattgtgaaaaatgaatcataccttgagggtgaagcaatttgacccttatatag 26977857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 59
Target Start/End: Original strand, 16030446 - 16030487
Alignment:
Q  18 agtgtgtagaaagtgttgtgaaaagtgaatcatgccttgagg 59  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  16030446 agtgtgtagaaagtgttgtgaaaagtgaatcataccttgagg 16030487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 78
Target Start/End: Original strand, 52565638 - 52565691
Alignment:
Q  25 agaaagtgttgtgaaaagtgaatcatgccttgaggatgaagcaagttcaccctt 78  Q
    ||||||||||||||||||||||||||  ||||||| ||||||||||||| ||||    
T  52565638 agaaagtgttgtgaaaagtgaatcataacttgagggtgaagcaagttcatcctt 52565691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 104
Target Start/End: Complemental strand, 23728860 - 23728774
Alignment:
Q  18 agtgtgtagaaagtgttgtgaaaagtgaatcatgccttgaggatgaagcaagttcacccttgtatagacgcacgttggttataaccg 104  Q
    ||||||||  ||||||||||||||||||    | |||||||| |||| ||||||||||||| ||||| ||||||||||  |||||||    
T  23728860 agtgtgtaagaagtgttgtgaaaagtgatgtgtaccttgagggtgaaacaagttcacccttatataggcgcacgttggccataaccg 23728774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 34273138 - 34273188
Alignment:
Q  18 agtgtgtagaaagtgttgtgaaaagtgaatcatgccttgaggatgaagcaa 68  Q
    |||||||||||||||||||| ||||||| |||| |||||||| ||||||||    
T  34273138 agtgtgtagaaagtgttgtgtaaagtgactcataccttgagggtgaagcaa 34273188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 88
Target Start/End: Complemental strand, 2140986 - 2140918
Alignment:
Q  20 tgtgtagaaagtgttgtgaaaagtgaatcatgccttgaggatgaagcaagttcacccttgtatagacgc 88  Q
    |||||||||||||||||| |||||||| ||| |||||||| |||||| |  |||||||| || ||||||    
T  2140986 tgtgtagaaagtgttgtggaaagtgaaccataccttgagggtgaagctaagtcacccttataaagacgc 2140918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 50
Target Start/End: Original strand, 5671821 - 5671853
Alignment:
Q  18 agtgtgtagaaagtgttgtgaaaagtgaatcat 50  Q
    |||||||||||||||||||||||||||||||||    
T  5671821 agtgtgtagaaagtgttgtgaaaagtgaatcat 5671853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 195
Target Start/End: Complemental strand, 14254958 - 14254906
Alignment:
Q  143 ggacatatgtagggtgatcctcgcgcgaaggtgtgctcctgtgtggcgcggtg 195  Q
    |||||| |||||||||||||||||||||  | ||||||||||||||| |||||    
T  14254958 ggacatgtgtagggtgatcctcgcgcgatagcgtgctcctgtgtggcacggtg 14254906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 65
Target Start/End: Complemental strand, 5459749 - 5459702
Alignment:
Q  18 agtgtgtagaaagtgttgtgaaaagtgaatcatgccttgaggatgaag 65  Q
    |||||||||||||||||||| |||||||||||| | ||| ||||||||    
T  5459749 agtgtgtagaaagtgttgtgtaaagtgaatcatacattggggatgaag 5459702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 46
Target Start/End: Complemental strand, 33101549 - 33101519
Alignment:
Q  16 aaagtgtgtagaaagtgttgtgaaaagtgaa 46  Q
    |||||||||||||||||||||||||||||||    
T  33101549 aaagtgtgtagaaagtgttgtgaaaagtgaa 33101519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 25408147 - 25408207
Alignment:
Q  18 agtgtgtagaaagtgttgtgaaaagtgaatcatgccttgaggatgaagcaagttcaccctt 78  Q
    ||||||||  ||||||||||||||||||    | |||||||| ||||||||||||||||||    
T  25408147 agtgtgtaagaagtgttgtgaaaagtgatgtgtcccttgagggtgaagcaagttcaccctt 25408207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 52; Significance: 6e-21; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 21416789 - 21416924
Alignment:
Q  18 agtgtgtagaaagtgttgtgaaaagtgaatcatgccttgaggatgaagcaagttcacccttgtatagacgcacgttggttataaccgcttccggattatc 117  Q
    |||||||||||||||||||||||| |||||| | |||| ||| ||||||||||||||||||||||||  || ||||||  |||||||  ||||| ||||     
T  21416789 agtgtgtagaaagtgttgtgaaaaatgaatcgtaccttaagggtgaagcaagttcacccttgtataggggcgcgttgggcataaccgtctccgggttatg 21416888  T
Q  118 tggcgtgtgaatagggacagttagaggacatatgta 153  Q
     ||| ||||| || |||  ||||||||||| |||||    
T  21416889 cggcctgtgattatggatggttagaggacacatgta 21416924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 12 - 142
Target Start/End: Complemental strand, 26916944 - 26916814
Alignment:
Q  12 agagaaagtgtgtagaaagtgttgtgaaaagtgaatcatgccttgaggatgaagcaagttcacccttgtatagacgcacgttggttataaccgcttccgg 111  Q
    ||||| |||||||||||||||||||||||||||| |||| ||||||| |||||||||  || ||||| ||||| ||| |||||   |||||||| ||| |    
T  26916944 agagagagtgtgtagaaagtgttgtgaaaagtgagtcataccttgagcatgaagcaatgtcgcccttatataggcgcgcgttgagaataaccgcctccag 26916845  T
Q  112 attatctggcgtgtgaatagggacagttaga 142  Q
     || |  ||||||||| |||||||| |||||    
T  26916844 gttttgcggcgtgtgattagggacaattaga 26916814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 18322996 - 18323060
Alignment:
Q  20 tgtgtagaaagtgttgtgaaaagtgaatcatgccttgaggatgaagcaagttcacccttgtatag 84  Q
    |||||||||| |||||||||||||||||||| | |||||||||||||||| |||||||| |||||    
T  18322996 tgtgtagaaaatgttgtgaaaagtgaatcatacattgaggatgaagcaaggtcacccttatatag 18323060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 165
Target Start/End: Original strand, 30477692 - 30477839
Alignment:
Q  18 agtgtgtagaaagtgttgtgaaaagtgaatcatgccttgaggatgaagcaagttcacccttgtatagacgcacgttggttataaccgcttccggattatc 117  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||| ||  |||||||| ||||| ||  ||| |   |||||||| || |  || |     
T  30477692 agtgtgtagaaagtgttgtgaaaagtgaatcataccttgagggtgaagtaatgtcacccttatataggcgtgcgtcgagaataaccgcctctgagttttg 30477791  T
Q  118 tggcgtgtgaatagggacagttagaggacatatgtagggtgatcctcg 165  Q
    | |||||||| || | | |||||||||||| ||||||||||| |||||    
T  30477792 ttgcgtgtgattaagaatagttagaggacacatgtagggtgaacctcg 30477839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 106
Target Start/End: Complemental strand, 17319665 - 17319586
Alignment:
Q  25 agaaagtgttgtgaaaagtgaatcatgccttgaggatgaagcaagttcacccttgtatagacgcacgttggttataaccgct 106  Q
    |||||| ||||||||||||||||||||||| |||| ||||||||||||||| || ||||| ||||  ||||| |||||||||    
T  17319665 agaaagagttgtgaaaagtgaatcatgcctcgagggtgaagcaagttcacctttatataggcgca--ttggtcataaccgct 17319586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 166
Target Start/End: Original strand, 5859866 - 5860014
Alignment:
Q  18 agtgtgtagaaagtgttgtgaaaagtgaatcatgccttgaggatgaagcaagttcacccttgtatagacgcacgttggttataaccgcttccggattatc 117  Q
    ||||||| || |||||| ||| ||||||||| | |||||||  ||||||||| |||||||| ||||| ||| ||||||  |||||||| || ||||| |     
T  5859866 agtgtgttgagagtgttttgagaagtgaatcgtaccttgagattgaagcaaggtcacccttatataggcgcgcgttggaaataaccgcctctggattttg 5859965  T
Q  118 tggcgtgtgaatagggacagttagaggacatatgtagggtgatcctcgc 166  Q
     |||| |||| ||||||| |||| | ||||  ||||| |||||||||||    
T  5859966 cggcgagtgattagggacggttaaatgacacgtgtagagtgatcctcgc 5860014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 6928130 - 6928070
Alignment:
Q  18 agtgtgtagaaagtgttgtgaaaagtgaatcatgccttgaggatgaagcaagttcaccctt 78  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||  || |||||||||    
T  6928130 agtgtgtagaaagtgttgtgaaaagtgaatcataccttgagggtgaattaatttcaccctt 6928070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 24507508 - 24507584
Alignment:
Q  18 agtgtgtagaaagtgttgtgaaaagtgaatcatgccttgaggatgaagcaagttcacccttgtatagacgcacgttg 94  Q
    ||||| ||||||||||||||||||||||||||| |||||||| ||||| | |||||||| | |||||  ||||||||    
T  24507508 agtgtctagaaagtgttgtgaaaagtgaatcataccttgagggtgaagtaggttcacccatatataggtgcacgttg 24507584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 3459524 - 3459458
Alignment:
Q  18 agtgtgtagaaagtgttg-tgaaaagtgaatcatgccttgaggatgaagcaagttcacccttgtatag 84  Q
    |||||||||||||||||| |||||||| |||| | |||||||| |||||||||||||||||| |||||    
T  3459524 agtgtgtagaaagtgttggtgaaaagtaaatcgtaccttgagg-tgaagcaagttcacccttatatag 3459458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 17698325 - 17698274
Alignment:
Q  18 agtgtgtagaaagtgttgtgaaaagtgaatcatgccttgaggatgaagcaag 69  Q
    |||||||||||||||||||||||||||||| || | |||||| |||||||||    
T  17698325 agtgtgtagaaagtgttgtgaaaagtgaattatactttgagggtgaagcaag 17698274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 13754809 - 13754857
Alignment:
Q  18 agtgtgtagaaagtgttgtgaaaagtgaatcatgccttgaggatgaagc 66  Q
    |||||||||||||||||||| |||||||||| | |||||||| ||||||    
T  13754809 agtgtgtagaaagtgttgtgtaaagtgaatcctaccttgagggtgaagc 13754857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 84
Target Start/End: Complemental strand, 23497194 - 23497137
Alignment:
Q  27 aaagtgttgtgaaaagtgaatcatgccttgaggatgaagcaagttcacccttgtatag 84  Q
    ||||||||||||| |||||||||| |||||||| | ||||||  |||||||| |||||    
T  23497194 aaagtgttgtgaatagtgaatcataccttgagggttaagcaaagtcacccttatatag 23497137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 50
Target Start/End: Original strand, 7220617 - 7220645
Alignment:
Q  22 tgtagaaagtgttgtgaaaagtgaatcat 50  Q
    |||||||||||||||||||||||||||||    
T  7220617 tgtagaaagtgttgtgaaaagtgaatcat 7220645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 13765040 - 13765088
Alignment:
Q  18 agtgtgtagaaagtgttgtgaaaagtgaatcatgccttgaggatgaagc 66  Q
    |||||||||||||||||||| ||||||||| ||| ||||| | ||||||    
T  13765040 agtgtgtagaaagtgttgtgtaaagtgaataatgtcttgaaggtgaagc 13765088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 50
Target Start/End: Original strand, 24070903 - 24070935
Alignment:
Q  18 agtgtgtagaaagtgttgtgaaaagtgaatcat 50  Q
    ||||||||||||||||||||| |||||||||||    
T  24070903 agtgtgtagaaagtgttgtgagaagtgaatcat 24070935  T

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Target: scaffold0360 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 13973 - 14039
Alignment:
Q  18 agtgtgtagaaagtgttgtgaaaagtgaatcatgccttgaggatgaagcaagttcacccttgtatag 84  Q
    ||||||||||||||||||||| ||||||||||| |||||||| ||||||||| |||||||| |||||    
T  13973 agtgtgtagaaagtgttgtgagaagtgaatcataccttgagggtgaagcaagatcacccttatatag 14039  T

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Target: scaffold0140 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 6349 - 6425
Alignment:
Q  18 agtgtgtagaaagtgttgtgaaaagtgaatcatgccttgaggatgaagcaagttcacccttgtatagacgcacgttg 94  Q
    |||||||||||||||||||||||||||| || | |||||||  ||||||||||||| |||| ||||| |||||||||    
T  6349 agtgtgtagaaagtgttgtgaaaagtgagtcgtaccttgagcgtgaagcaagttcatccttatataggcgcacgttg 6425  T

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Target: scaffold0054 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 68847 - 68776
Alignment:
Q  13 gagaaagtgtgtagaaagtgttgtgaaaagtgaatcatgccttgaggatgaagcaagttcacccttgtatag 84  Q
    ||||||| || ||||||||||||||||||||||||||| ||||||||  |||||||| |||||||| |||||    
T  68847 gagaaagagtatagaaagtgttgtgaaaagtgaatcataccttgagggagaagcaaggtcacccttatatag 68776  T

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Target: scaffold0023 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 163
Target Start/End: Complemental strand, 95850 - 95705
Alignment:
Q  18 agtgtgtagaaagtgttgtgaaaagtgaatcatgccttgaggatgaagcaagttcacccttgtatagacgcacgttggttataaccgcttccggattatc 117  Q
    |||| |||||||||||||||||||||||||||| |||| ||| ||||||||  |||||||| ||||| | | |||| |  ||| |  | ||||  || |     
T  95850 agtgcgtagaaagtgttgtgaaaagtgaatcataccttcagggtgaagcaacgtcacccttatataggcacgcgtttggaatatctacctccgagttttg 95751  T
Q  118 tggcgtgtgaatagggacagttagaggacatatgtagggtgatcct 163  Q
     ||||||||| ||||||| ||||||||||| |||||| ||||||||    
T  95750 cggcgtgtgattagggacggttagaggacacatgtagagtgatcct 95705  T

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Target: scaffold0380 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 134
Target Start/End: Complemental strand, 6900 - 6784
Alignment:
Q  18 agtgtgtagaaagtgttgtgaaaagtgaatcatgccttgaggatgaagcaagttcacccttgtatagacgcacgttggttataaccgcttccggattatc 117  Q
    ||||||||  ||||||||||||||||||    | |||||||| |||| ||||||||||||||||||| ||||||||||  |||||||  ||| | ||||     
T  6900 agtgtgtaagaagtgttgtgaaaagtgatgtgtaccttgagggtgaaacaagttcacccttgtataggcgcacgttggccataaccgtctccaggttatg 6801  T
Q  118 tggcgtgtgaataggga 134  Q
     ||||||||| ||||||    
T  6800 cggcgtgtgattaggga 6784  T

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Target: scaffold0101 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 25 - 84
Target Start/End: Complemental strand, 10764 - 10705
Alignment:
Q  25 agaaagtgttgtgaaaagtgaatcatgccttgaggatgaagcaagttcacccttgtatag 84  Q
    |||||| ||||||||||||||||||||||| |||| ||||||||||||||| || |||||    
T  10764 agaaagagttgtgaaaagtgaatcatgcctcgagggtgaagcaagttcacctttatatag 10705  T

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Target: scaffold0057 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 104
Target Start/End: Complemental strand, 73842 - 73756
Alignment:
Q  18 agtgtgtagaaagtgttgtgaaaagtgaatcatgccttgaggatgaagcaagttcacccttgtatagacgcacgttggttataaccg 104  Q
    |||| ||||||||||||||||||||| |||||| |||| ||| |||||||||||||||  | ||||| |||  ||||| ||||||||    
T  73842 agtgcgtagaaagtgttgtgaaaagtaaatcataccttcagggtgaagcaagttcaccaatatataggcgcgtgttgggtataaccg 73756  T

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Target: scaffold0002 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 195
Target Start/End: Original strand, 379767 - 379943
Alignment:
Q  18 agtgtgtagaaagtgttgtgaaaagtgaatcatgccttgaggatgaagcaagttcacccttgtatagacgcacgttggttataaccgcttccggattatc 117  Q
    ||||||||  ||||||||||||||||||    | |||||||| |||||||||||||||| | ||||| |||| |||||| ||||||   || | |||||     
T  379767 agtgtgtaagaagtgttgtgaaaagtgatgtgtaccttgagggtgaagcaagttcacccgtatataggcgcatgttggtcataaccatctctgaattatg 379866  T
Q  118 tggcgtgtgaatagggacagttag-aggacatatgtagggtgatcctcgcgcgaaggtgtgctcctgtgtggcgcggtg 195  Q
     ||||||||| || |||| |  || ||||||  |||||||||||||||  | ||||| | ||||||||||||| |||||    
T  379867 cggcgtgtgattatggacgg--agcaggacacgtgtagggtgatcctcttgtgaaggcgcgctcctgtgtggcacggtg 379943  T

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Target: scaffold0002; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 121051 - 120985
Alignment:
Q  18 agtgtgtagaaagtgttgtgaaaagtgaatcatgccttgaggatgaagcaagttcacccttgtatag 84  Q
    |||||||| |||||||||||||||||||    | |||||||| |||||||| ||||||||| |||||    
T  121051 agtgtgtataaagtgttgtgaaaagtgatgtgtaccttgagggtgaagcaaattcacccttatatag 120985  T

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Target: scaffold0074 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 147
Target Start/End: Original strand, 35304 - 35434
Alignment:
Q  18 agtgtgtagaaagtgttgtgaaaa-gtgaatcatgccttgaggatgaagcaagttcacccttgtatagacgcacgttggttataaccgcttccggattat 116  Q
    ||||||| |||||||||||||||| ||||||||| | ||||||  |||||   || |||||| ||||| | ||||||||  |||| ||  ||||| | ||    
T  35304 agtgtgtggaaagtgttgtgaaaaagtgaatcatcctttgagggggaagcggctttacccttatataggcacacgttgggcataatcgtctccggctgat 35403  T
Q  117 ctggcgtgtgaatagggacagttagaggaca 147  Q
    ||| | ||||||||||||| |||||||||||    
T  35404 ctgacctgtgaatagggacggttagaggaca 35434  T

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Target: scaffold0505 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0505
Description:

Target: scaffold0505; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 50
Target Start/End: Original strand, 7936 - 7968
Alignment:
Q  18 agtgtgtagaaagtgttgtgaaaagtgaatcat 50  Q
    |||||||||||||||||||||||||||||||||    
T  7936 agtgtgtagaaagtgttgtgaaaagtgaatcat 7968  T

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Target: scaffold0174 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 51
Target Start/End: Complemental strand, 29315 - 29285
Alignment:
Q  21 gtgtagaaagtgttgtgaaaagtgaatcatg 51  Q
    |||||||||||||||||||||||||||||||    
T  29315 gtgtagaaagtgttgtgaaaagtgaatcatg 29285  T

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Target: scaffold0205 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 103
Target Start/End: Original strand, 22938 - 23022
Alignment:
Q  19 gtgtgtagaaagtgttgtgaaaagtgaatcatgccttgaggatgaagcaagttcacccttgtatagacgcacgttggttataacc 103  Q
    |||||||  ||||||||||||||||||    | |||||||| |||||||||||||||||| | |||  || ||||||| ||||||    
T  22938 gtgtgtaagaagtgttgtgaaaagtgacgtgtaccttgagggtgaagcaagttcacccttatgtaggtgcgcgttggtgataacc 23022  T

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