View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1771_high_5 (Length: 578)

Name: NF1771_high_5
Description: NF1771
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1771_high_5
NF1771_high_5
[»] chr4 (84 HSPs)
chr4 (15-572)||(25909111-25909665)
chr4 (388-553)||(53312284-53312446)
chr4 (389-553)||(2016790-2016950)
chr4 (388-570)||(4796178-4796354)
chr4 (393-553)||(51362539-51362698)
chr4 (390-553)||(10059852-10060013)
chr4 (465-577)||(21597533-21597645)
chr4 (392-572)||(21871523-21871696)
chr4 (392-572)||(21927384-21927557)
chr4 (386-558)||(6207324-6207494)
chr4 (390-572)||(14449420-14449599)
chr4 (387-553)||(44356553-44356713)
chr4 (386-552)||(8965672-8965828)
chr4 (388-553)||(1420699-1420860)
chr4 (389-572)||(12719581-12719761)
chr4 (388-538)||(14060873-14061019)
chr4 (388-577)||(2836897-2837082)
chr4 (476-572)||(43074724-43074820)
chr4 (389-452)||(19909172-19909235)
chr4 (389-553)||(21451458-21451616)
chr4 (488-572)||(49185663-49185747)
chr4 (393-553)||(16292273-16292427)
chr4 (391-449)||(21957722-21957780)
chr4 (477-547)||(27978774-27978844)
chr4 (393-571)||(53924888-53925061)
chr4 (392-537)||(14016722-14016868)
chr4 (389-578)||(23759705-23759888)
chr4 (476-552)||(2654125-2654201)
chr4 (390-570)||(20112288-20112463)
chr4 (477-572)||(6637199-6637294)
chr4 (492-571)||(54855401-54855480)
chr4 (388-442)||(4796034-4796088)
chr4 (515-569)||(6614983-6615037)
chr4 (390-444)||(42525965-42526019)
chr4 (390-444)||(43074826-43074880)
chr4 (392-441)||(1420537-1420586)
chr4 (392-553)||(20118058-20118218)
chr4 (476-553)||(35383914-35383991)
chr4 (390-439)||(52463052-52463101)
chr4 (497-577)||(8070728-8070808)
chr4 (393-449)||(11983465-11983521)
chr4 (497-553)||(31553397-31553453)
chr4 (391-443)||(35615315-35615367)
chr4 (383-443)||(43074609-43074669)
chr4 (497-572)||(35393403-35393478)
chr4 (389-443)||(1186657-1186711)
chr4 (519-561)||(41707843-41707885)
chr4 (476-553)||(51233562-51233639)
chr4 (392-449)||(8070630-8070687)
chr4 (394-443)||(14060760-14060809)
chr4 (492-541)||(38829917-38829966)
chr4 (476-572)||(11824270-11824365)
chr4 (497-541)||(33167979-33168023)
chr4 (519-578)||(35083709-35083769)
chr4 (516-572)||(42526099-42526155)
chr4 (497-545)||(44271841-44271889)
chr4 (497-553)||(52462943-52462999)
chr4 (506-553)||(18937395-18937442)
chr4 (515-578)||(54983963-54984026)
chr4 (519-553)||(5344395-5344429)
chr4 (519-577)||(20466510-20466568)
chr4 (519-577)||(20473836-20473894)
chr4 (389-443)||(21957538-21957592)
chr4 (393-443)||(37831595-37831645)
chr4 (390-520)||(50769551-50769675)
chr4 (519-553)||(51537586-51537620)
chr4 (519-553)||(51537770-51537804)
chr4 (519-553)||(51696661-51696695)
chr4 (519-553)||(54607012-54607046)
chr4 (388-441)||(2017051-2017104)
chr4 (390-443)||(2653953-2654006)
chr4 (476-561)||(21322858-21322943)
chr4 (476-553)||(34567771-34567848)
chr4 (386-443)||(40489207-40489264)
chr4 (497-541)||(1140472-1140516)
chr4 (497-553)||(7666352-7666408)
chr4 (497-537)||(12893150-12893190)
chr4 (393-441)||(29697527-29697575)
chr4 (465-553)||(29697593-29697680)
chr4 (497-545)||(29775463-29775511)
chr4 (497-553)||(47999632-47999688)
chr4 (497-541)||(53061715-53061759)
chr4 (519-578)||(54216085-54216145)
chr4 (519-578)||(55586741-55586801)
[»] chr5 (59 HSPs)
chr5 (15-199)||(40421725-40421911)
chr5 (388-571)||(27904620-27904799)
chr5 (389-572)||(12406176-12406355)
chr5 (390-569)||(3333840-3334015)
chr5 (393-572)||(20512197-20512374)
chr5 (378-572)||(40276165-40276356)
chr5 (392-572)||(20629880-20630057)
chr5 (392-553)||(37897873-37898029)
chr5 (225-389)||(40421561-40421725)
chr5 (465-572)||(2974704-2974811)
chr5 (478-577)||(26702519-26702618)
chr5 (478-577)||(26972252-26972351)
chr5 (389-572)||(36798169-36798348)
chr5 (476-578)||(31080558-31080660)
chr5 (390-572)||(32391855-32392033)
chr5 (386-578)||(39574235-39574419)
chr5 (390-550)||(25363825-25363981)
chr5 (476-572)||(25910805-25910901)
chr5 (389-572)||(22300600-22300778)
chr5 (462-572)||(3999234-3999344)
chr5 (476-570)||(35166377-35166471)
chr5 (392-578)||(30604217-30604399)
chr5 (393-447)||(40133136-40133190)
chr5 (381-438)||(24405481-24405538)
chr5 (389-449)||(36798430-36798491)
chr5 (476-572)||(9852868-9852964)
chr5 (388-443)||(12406039-12406094)
chr5 (465-572)||(16132815-16132922)
chr5 (465-547)||(19131661-19131743)
chr5 (391-553)||(43098182-43098337)
chr5 (515-572)||(6130394-6130451)
chr5 (476-553)||(18403068-18403145)
chr5 (390-443)||(21066375-21066428)
chr5 (391-553)||(24779276-24779432)
chr5 (476-572)||(34320083-34320179)
chr5 (497-545)||(38163578-38163626)
chr5 (497-566)||(39528869-39528938)
chr5 (393-441)||(8284158-8284206)
chr5 (497-541)||(22471804-22471848)
chr5 (497-545)||(26364708-26364756)
chr5 (477-549)||(28446087-28446159)
chr5 (497-545)||(38974789-38974837)
chr5 (390-438)||(40132904-40132952)
chr5 (388-443)||(2974895-2974950)
chr5 (390-449)||(6131790-6131849)
chr5 (499-546)||(20039998-20040045)
chr5 (519-566)||(35678225-35678272)
chr5 (519-553)||(4096576-4096610)
chr5 (519-561)||(8986735-8986777)
chr5 (519-553)||(10029226-10029260)
chr5 (384-446)||(12610238-12610300)
chr5 (393-443)||(19340767-19340817)
chr5 (476-578)||(19340894-19340996)
chr5 (519-553)||(35306856-35306890)
chr5 (497-553)||(223048-223104)
chr5 (497-541)||(4887554-4887598)
chr5 (389-449)||(20512454-20512514)
chr5 (497-553)||(28736543-28736599)
chr5 (497-537)||(37887775-37887815)
[»] chr1 (65 HSPs)
chr1 (389-572)||(3377500-3377679)
chr1 (477-572)||(23220649-23220744)
chr1 (389-577)||(17760681-17760867)
chr1 (393-572)||(12960981-12961155)
chr1 (390-572)||(14978797-14978974)
chr1 (394-545)||(6320562-6320714)
chr1 (465-572)||(7579735-7579842)
chr1 (396-571)||(25085530-25085698)
chr1 (392-546)||(23891797-23891942)
chr1 (391-553)||(16874658-16874816)
chr1 (466-570)||(50226529-50226633)
chr1 (389-572)||(30849366-30849544)
chr1 (465-550)||(8301503-8301588)
chr1 (476-553)||(41997796-41997873)
chr1 (393-578)||(46572830-46573008)
chr1 (465-553)||(39642363-39642451)
chr1 (465-553)||(44672383-44672471)
chr1 (477-572)||(46505306-46505401)
chr1 (387-553)||(15659146-15659311)
chr1 (389-443)||(51250484-51250538)
chr1 (384-553)||(17692721-17692884)
chr1 (403-552)||(49426149-49426291)
chr1 (477-553)||(6569662-6569738)
chr1 (478-577)||(5287358-5287457)
chr1 (461-572)||(25486281-25486391)
chr1 (387-441)||(12960843-12960897)
chr1 (476-550)||(18632397-18632471)
chr1 (389-443)||(50226391-50226445)
chr1 (480-577)||(16298188-16298285)
chr1 (465-546)||(50401442-50401522)
chr1 (476-575)||(1853588-1853685)
chr1 (498-553)||(7060794-7060849)
chr1 (388-443)||(41997638-41997693)
chr1 (509-578)||(46880871-46880941)
chr1 (390-443)||(3377772-3377825)
chr1 (497-546)||(8009831-8009880)
chr1 (388-449)||(25085397-25085458)
chr1 (388-452)||(27864408-27864473)
chr1 (465-570)||(44436828-44436932)
chr1 (388-553)||(45738934-45739094)
chr1 (465-553)||(1096538-1096626)
chr1 (391-443)||(5287835-5287887)
chr1 (393-449)||(16874511-16874567)
chr1 (497-545)||(51462343-51462391)
chr1 (497-545)||(51462971-51463019)
chr1 (519-578)||(20017507-20017566)
chr1 (519-553)||(14892-14926)
chr1 (478-552)||(14190698-14190772)
chr1 (501-547)||(23480075-23480121)
chr1 (476-578)||(32295083-32295185)
chr1 (519-561)||(32341638-32341680)
chr1 (519-553)||(33811550-33811584)
chr1 (519-553)||(34988215-34988249)
chr1 (388-446)||(35544743-35544801)
chr1 (497-547)||(46039041-46039091)
chr1 (392-441)||(18632602-18632651)
chr1 (390-443)||(32295214-32295267)
chr1 (389-442)||(39642199-39642252)
chr1 (497-541)||(4476108-4476152)
chr1 (497-553)||(16545663-16545719)
chr1 (497-545)||(21259892-21259940)
chr1 (497-553)||(26861377-26861433)
chr1 (381-441)||(37696541-37696601)
chr1 (390-442)||(46039143-46039195)
chr1 (497-541)||(51549247-51549291)
[»] chr8 (52 HSPs)
chr8 (388-577)||(41487341-41487525)
chr8 (465-572)||(3676264-3676371)
chr8 (390-572)||(45177201-45177379)
chr8 (384-550)||(29044705-29044865)
chr8 (465-552)||(37813247-37813334)
chr8 (465-553)||(21486725-21486813)
chr8 (388-578)||(30539121-30539306)
chr8 (499-564)||(36688150-36688215)
chr8 (393-547)||(37939917-37940063)
chr8 (393-443)||(25896993-25897043)
chr8 (392-553)||(29657702-29657863)
chr8 (497-553)||(33298442-33298498)
chr8 (389-549)||(44269278-44269432)
chr8 (390-553)||(6807324-6807480)
chr8 (389-572)||(23702271-23702449)
chr8 (388-538)||(32071185-32071327)
chr8 (461-553)||(14880402-14880494)
chr8 (497-545)||(23936440-23936488)
chr8 (473-577)||(25144021-25144125)
chr8 (387-443)||(28349568-28349624)
chr8 (498-553)||(25897073-25897127)
chr8 (390-444)||(9762459-9762513)
chr8 (388-438)||(45515931-45515981)
chr8 (477-562)||(521590-521675)
chr8 (476-549)||(29790839-29790912)
chr8 (390-443)||(36688258-36688311)
chr8 (390-446)||(9878359-9878415)
chr8 (497-541)||(12278938-12278982)
chr8 (519-566)||(5734326-5734373)
chr8 (391-449)||(15181640-15181699)
chr8 (465-572)||(16982747-16982853)
chr8 (388-443)||(20853376-20853431)
chr8 (386-452)||(23702119-23702186)
chr8 (519-553)||(6655432-6655466)
chr8 (519-553)||(6735834-6735868)
chr8 (519-553)||(8287758-8287792)
chr8 (476-578)||(27545422-27545523)
chr8 (388-446)||(32498376-32498434)
chr8 (515-577)||(35213160-35213222)
chr8 (519-553)||(37205695-37205729)
chr8 (515-553)||(39889928-39889966)
chr8 (388-449)||(41602865-41602927)
chr8 (492-541)||(5916504-5916553)
chr8 (476-553)||(26823908-26823985)
chr8 (497-537)||(8952733-8952773)
chr8 (465-553)||(22192453-22192541)
chr8 (497-545)||(27300680-27300728)
chr8 (388-436)||(27545342-27545390)
chr8 (387-443)||(31947851-31947907)
chr8 (390-438)||(32768326-32768374)
chr8 (514-546)||(41567097-41567129)
chr8 (497-541)||(45309488-45309532)
[»] chr3 (69 HSPs)
chr3 (388-553)||(51315639-51315800)
chr3 (393-572)||(33329753-33329933)
chr3 (382-551)||(578570-578733)
chr3 (393-572)||(44585922-44586097)
chr3 (386-572)||(7218287-7218473)
chr3 (388-572)||(86573-86751)
chr3 (465-572)||(44436534-44436641)
chr3 (391-572)||(1814693-1814866)
chr3 (389-577)||(3916430-3916612)
chr3 (465-572)||(8024918-8025025)
chr3 (386-546)||(44433226-44433384)
chr3 (477-577)||(19404525-19404625)
chr3 (389-529)||(38957844-38957981)
chr3 (390-578)||(54719127-54719309)
chr3 (385-553)||(1938312-1938475)
chr3 (465-570)||(43747418-43747523)
chr3 (498-553)||(52008348-52008403)
chr3 (461-546)||(4474135-4474220)
chr3 (388-541)||(49787248-49787397)
chr3 (471-535)||(14340907-14340971)
chr3 (515-578)||(12759638-12759701)
chr3 (391-553)||(43586716-43586872)
chr3 (389-449)||(25902607-25902668)
chr3 (498-567)||(38177280-38177349)
chr3 (391-553)||(54464163-54464321)
chr3 (465-553)||(14856711-14856799)
chr3 (497-553)||(36567029-36567085)
chr3 (506-570)||(44624735-44624799)
chr3 (481-553)||(53184596-53184667)
chr3 (392-443)||(22494555-22494606)
chr3 (476-551)||(25843447-25843522)
chr3 (403-449)||(29512560-29512607)
chr3 (462-553)||(35359064-35359155)
chr3 (461-535)||(15976304-15976378)
chr3 (480-578)||(46226783-46226881)
chr3 (476-549)||(27178306-27178379)
chr3 (477-550)||(28204644-28204717)
chr3 (390-443)||(38177178-38177231)
chr3 (505-578)||(48348389-48348462)
chr3 (385-437)||(14349375-14349427)
chr3 (497-541)||(33943690-33943734)
chr3 (497-541)||(35494164-35494208)
chr3 (386-442)||(44127609-44127665)
chr3 (477-553)||(47189749-47189825)
chr3 (497-545)||(55093254-55093302)
chr3 (519-578)||(2205658-2205717)
chr3 (497-572)||(20432320-20432395)
chr3 (515-570)||(36687729-36687784)
chr3 (476-570)||(36677649-36677743)
chr3 (387-452)||(36687846-36687912)
chr3 (499-541)||(51226358-51226400)
chr3 (389-449)||(20432189-20432250)
chr3 (476-553)||(28712536-28712613)
chr3 (388-441)||(28944228-28944281)
chr3 (387-450)||(36677769-36677833)
chr3 (375-443)||(4474328-4474396)
chr3 (497-545)||(5635510-5635558)
chr3 (519-551)||(9153633-9153665)
chr3 (497-545)||(10730564-10730612)
chr3 (390-449)||(20432437-20432497)
chr3 (386-438)||(25154447-25154499)
chr3 (465-532)||(25248761-25248829)
chr3 (497-541)||(33447138-33447182)
chr3 (497-541)||(33944335-33944379)
chr3 (497-541)||(40989505-40989549)
chr3 (497-545)||(46984985-46985033)
chr3 (497-541)||(49001813-49001857)
chr3 (497-541)||(51225089-51225133)
chr3 (497-541)||(55094486-55094530)
[»] chr2 (69 HSPs)
chr2 (473-578)||(37431622-37431727)
chr2 (389-553)||(14943700-14943858)
chr2 (389-570)||(34679096-34679273)
chr2 (462-578)||(5008418-5008534)
chr2 (465-577)||(44617870-44617982)
chr2 (390-572)||(39918434-39918612)
chr2 (395-578)||(34760851-34761031)
chr2 (387-552)||(25333496-25333656)
chr2 (389-572)||(43028793-43028971)
chr2 (389-553)||(19399332-19399490)
chr2 (465-572)||(14489284-14489391)
chr2 (387-553)||(5470492-5470652)
chr2 (476-553)||(32969639-32969716)
chr2 (387-553)||(6592721-6592885)
chr2 (388-443)||(25375134-25375189)
chr2 (386-443)||(19206138-19206195)
chr2 (393-570)||(24306157-24306331)
chr2 (388-577)||(24472578-24472760)
chr2 (465-552)||(4925510-4925597)
chr2 (389-511)||(25379-25502)
chr2 (515-577)||(36195710-36195772)
chr2 (386-443)||(5362171-5362228)
chr2 (388-449)||(14489465-14489526)
chr2 (477-578)||(41196360-41196461)
chr2 (497-553)||(2609244-2609300)
chr2 (391-439)||(19399183-19399231)
chr2 (465-553)||(25411612-25411700)
chr2 (476-552)||(37803205-37803280)
chr2 (515-570)||(5362313-5362368)
chr2 (477-572)||(8553680-8553774)
chr2 (389-444)||(21361880-21361934)
chr2 (515-578)||(31827647-31827710)
chr2 (388-443)||(44297561-44297616)
chr2 (389-443)||(21358366-21358420)
chr2 (389-439)||(36715559-36715609)
chr2 (497-570)||(4576681-4576754)
chr2 (381-438)||(12948880-12948937)
chr2 (465-550)||(18969252-18969337)
chr2 (476-572)||(8857128-8857224)
chr2 (497-545)||(14983369-14983417)
chr2 (497-545)||(16144790-16144838)
chr2 (385-448)||(22333330-22333394)
chr2 (497-545)||(23686663-23686711)
chr2 (497-541)||(28719480-28719524)
chr2 (465-553)||(35718716-35718804)
chr2 (381-449)||(36177345-36177413)
chr2 (497-545)||(43741665-43741713)
chr2 (497-545)||(44078393-44078441)
chr2 (498-541)||(52146-52189)
chr2 (381-444)||(4576801-4576863)
chr2 (519-562)||(13732312-13732355)
chr2 (516-575)||(19206281-19206340)
chr2 (393-443)||(4576546-4576596)
chr2 (390-440)||(15022838-15022888)
chr2 (476-578)||(27489514-27489616)
chr2 (519-553)||(42445497-42445531)
chr2 (497-578)||(19895744-19895825)
chr2 (390-443)||(20480077-20480130)
chr2 (390-443)||(24498106-24498158)
chr2 (390-435)||(31827800-31827845)
chr2 (497-541)||(14983806-14983850)
chr2 (497-541)||(16143828-16143872)
chr2 (497-537)||(21633178-21633218)
chr2 (497-541)||(23048453-23048497)
chr2 (497-541)||(23685975-23686019)
chr2 (380-416)||(34100761-34100797)
chr2 (497-545)||(35921029-35921077)
chr2 (390-438)||(37803398-37803446)
chr2 (497-541)||(43891525-43891569)
[»] chr7 (54 HSPs)
chr7 (388-572)||(28785891-28786073)
chr7 (386-578)||(41243640-41243826)
chr7 (388-577)||(15107123-15107305)
chr7 (393-553)||(18186606-18186763)
chr7 (388-578)||(35250117-35250302)
chr7 (389-537)||(28350115-28350259)
chr7 (465-550)||(36580433-36580518)
chr7 (389-578)||(15347953-15348134)
chr7 (476-572)||(36903344-36903440)
chr7 (481-550)||(23826106-23826175)
chr7 (465-553)||(18504314-18504402)
chr7 (388-578)||(4049704-4049893)
chr7 (465-572)||(15029132-15029238)
chr7 (391-578)||(28472391-28472571)
chr7 (465-572)||(29834287-29834394)
chr7 (388-449)||(6792050-6792112)
chr7 (393-534)||(9500075-9500213)
chr7 (394-443)||(21505878-21505927)
chr7 (477-553)||(8073957-8074033)
chr7 (386-442)||(17931988-17932044)
chr7 (390-442)||(36903529-36903581)
chr7 (508-572)||(44312879-44312943)
chr7 (379-551)||(14247462-14247625)
chr7 (388-443)||(20505096-20505151)
chr7 (476-546)||(28350307-28350376)
chr7 (465-546)||(3381933-3382013)
chr7 (476-553)||(6726410-6726486)
chr7 (388-449)||(19645056-19645117)
chr7 (388-537)||(20184914-20185060)
chr7 (385-453)||(45697482-45697551)
chr7 (476-572)||(5172593-5172689)
chr7 (517-553)||(40872321-40872357)
chr7 (388-443)||(42256580-42256636)
chr7 (497-545)||(42437879-42437927)
chr7 (388-439)||(3318316-3318367)
chr7 (519-558)||(10312376-10312415)
chr7 (515-550)||(20505191-20505226)
chr7 (392-443)||(47909696-47909747)
chr7 (389-447)||(11373846-11373904)
chr7 (476-546)||(11374130-11374199)
chr7 (476-542)||(17876251-17876317)
chr7 (519-553)||(25036187-25036221)
chr7 (497-547)||(32043609-32043659)
chr7 (389-443)||(33159483-33159537)
chr7 (516-553)||(21505773-21505810)
chr7 (388-452)||(24433215-24433280)
chr7 (497-578)||(25987052-25987133)
chr7 (390-446)||(35793375-35793432)
chr7 (389-446)||(40139818-40139875)
chr7 (390-438)||(10097791-10097839)
chr7 (497-553)||(19644905-19644961)
chr7 (388-444)||(23826282-23826338)
chr7 (497-545)||(26974393-26974441)
chr7 (497-545)||(30503810-30503858)
[»] scaffold0137 (1 HSPs)
scaffold0137 (391-553)||(19915-20072)
[»] chr6 (36 HSPs)
chr6 (388-578)||(10727324-10727510)
chr6 (389-572)||(30349348-30349526)
chr6 (386-553)||(33399782-33399943)
chr6 (389-551)||(2840965-2841127)
chr6 (391-569)||(6036799-6036971)
chr6 (477-571)||(32143341-32143435)
chr6 (477-578)||(266242-266342)
chr6 (476-572)||(3812822-3812917)
chr6 (465-553)||(18031097-18031185)
chr6 (393-553)||(239100-239256)
chr6 (386-443)||(30349617-30349674)
chr6 (476-572)||(5003215-5003311)
chr6 (394-438)||(20474970-20475014)
chr6 (477-553)||(26311559-26311635)
chr6 (388-541)||(2853582-2853732)
chr6 (388-441)||(2203185-2203238)
chr6 (476-572)||(1377289-1377385)
chr6 (476-572)||(1385037-1385133)
chr6 (466-553)||(11351707-11351794)
chr6 (394-578)||(17532254-17532434)
chr6 (386-537)||(26601457-26601603)
chr6 (390-438)||(17248636-17248684)
chr6 (497-553)||(17248739-17248795)
chr6 (390-449)||(266122-266181)
chr6 (517-552)||(2203286-2203321)
chr6 (492-547)||(4037364-4037419)
chr6 (503-545)||(22516110-22516152)
chr6 (497-543)||(29874368-29874414)
chr6 (380-438)||(32143248-32143305)
chr6 (497-562)||(15711781-15711846)
chr6 (497-541)||(2017275-2017319)
chr6 (497-541)||(2018364-2018408)
chr6 (497-541)||(11624215-11624259)
chr6 (517-553)||(16735690-16735726)
chr6 (517-553)||(27771368-27771404)
chr6 (497-541)||(29873202-29873246)
[»] scaffold0578 (1 HSPs)
scaffold0578 (462-561)||(3143-3242)
[»] scaffold0248 (1 HSPs)
scaffold0248 (393-577)||(405-586)
[»] scaffold0417 (1 HSPs)
scaffold0417 (482-553)||(9425-9496)
[»] scaffold0328 (1 HSPs)
scaffold0328 (393-544)||(9415-9561)
[»] scaffold0025 (2 HSPs)
scaffold0025 (465-538)||(19199-19272)
scaffold0025 (393-443)||(19602-19652)
[»] scaffold0015 (2 HSPs)
scaffold0015 (476-553)||(76944-77020)
scaffold0015 (387-443)||(77122-77178)
[»] scaffold0372 (1 HSPs)
scaffold0372 (389-553)||(123-281)
[»] scaffold0515 (1 HSPs)
scaffold0515 (386-443)||(3635-3692)
[»] scaffold0306 (1 HSPs)
scaffold0306 (386-443)||(3635-3692)
[»] scaffold1458 (1 HSPs)
scaffold1458 (386-443)||(1467-1524)
[»] scaffold0194 (1 HSPs)
scaffold0194 (465-578)||(25030-25142)
[»] scaffold0166 (1 HSPs)
scaffold0166 (391-553)||(21659-21815)
[»] scaffold0062 (1 HSPs)
scaffold0062 (476-553)||(46230-46307)
[»] scaffold0011 (1 HSPs)
scaffold0011 (497-572)||(145456-145531)
[»] scaffold0041 (1 HSPs)
scaffold0041 (517-553)||(93925-93961)
[»] scaffold0016 (2 HSPs)
scaffold0016 (497-541)||(199771-199815)
scaffold0016 (497-545)||(201096-201144)
[»] scaffold0809 (1 HSPs)
scaffold0809 (386-561)||(2908-3075)
[»] scaffold0047 (1 HSPs)
scaffold0047 (497-547)||(63138-63188)
[»] scaffold0032 (1 HSPs)
scaffold0032 (519-561)||(16644-16686)
[»] scaffold0014 (1 HSPs)
scaffold0014 (519-553)||(79115-79149)
[»] scaffold0854 (1 HSPs)
scaffold0854 (497-546)||(2006-2055)
[»] scaffold0150 (1 HSPs)
scaffold0150 (505-542)||(9703-9740)
[»] scaffold0725 (1 HSPs)
scaffold0725 (388-448)||(6687-6747)


Alignment Details
Target: chr4 (Bit Score: 423; Significance: 0; HSPs: 84)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 423; E-Value: 0
Query Start/End: Original strand, 15 - 572
Target Start/End: Original strand, 25909111 - 25909665
Alignment:
Q  15 agttactaccggctacttttggctggttacaattttgatttttacagttgagttttggttgaggacctgttgatgaatgtaactgggaccacgatgatgg 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  25909111 agttactaccggctacttttggctggttacaattttgatttttacagttgagttttggttgaggatctgttgatgaatgtaactgggaccacgatgatgg 25909210  T
Q  115 gtctctgtgaaaatttgtacttgggtctagttcaaaagtac-tactattttggcttcagattgatccttaatgtcaaaagcacttctatttggtgtgaag 213  Q
     | |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25909211 atttctgtgaaaatttgtacttgggtctagttcaaaagtacctactattttggcttcagattgatccttaatgtcaaaagcacttctatttggtgtgaag 25909310  T
Q  214 aacaaggacaccattttgaacaatattaattattcattcccttattcgacatctttgatccatttaccgagtttcattggcagtgatttttctctactat 313  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  25909311 aacaaggacaccattttgaacaatattaattattcattcccttattcgacatctttgatccatttaccgagtttcattggcattgatttttctctactat 25909410  T
Q  314 ttctcatcttctgaataatcggatacagcaacaatttgtcaatgaattagtcaatcttgtgtcattatttataataggcttaatagcaattttagccccc 413  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| |||||    
T  25909411 ttctcatcttctgaataatcggatacagcaacaattcgtcaatgaattagtcaatcttgtgtcattatttataacaggcttaatagcagttttaaccccc 25909510  T
Q  414 taaatttttcaaagttgcgattttgg-cccctaagaagaagnnnnnnnctataaaaccgtccactaagttttgcacttgtggtggttttggcccccaaga 512  Q
    ||| |||| |||||||| |||||||| |||||||||| ||        ||||||||||| || ||||||||||||||||||| ||||||||||||||||     
T  25909511 taacttttccaaagttgtgattttggccccctaagaaaaa-----aaactataaaaccgccccctaagttttgcacttgtggaggttttggcccccaagg 25909605  T
Q  513 ctaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttatttt 572  Q
    | ||||||||||||||||||||||||||| |||| |||||  |||||||  |||||||||    
T  25909606 ccaattttgactcggtctacgctgacgtggcaccttaagtaagatgccacgtgttatttt 25909665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 388 - 553
Target Start/End: Original strand, 53312284 - 53312446
Alignment:
Q  388 taggcttaatagcaattttagccccctaaatttttcaaagttgcgattttgg-cccctaagaagaagnnnnnnnctataaaaccgtccactaagttttgc 486  Q
    |||||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||||| ||        ||| ||||||  || |||| ||||||    
T  53312284 taggcttaatagcatttttagccccctaactttttcaaagttgcgattttggccccctaagaaaaa----caaactacaaaaccaccccctaaattttgc 53312379  T
Q  487 acttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    || |||||  ||||||||||||||| | ||||| ||||| ||||||||||||||| |||||||||||    
T  53312380 acatgtggcagttttggcccccaaggccaatttggactcagtctacgctgacgtggcaccctaagtg 53312446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 389 - 553
Target Start/End: Original strand, 2016790 - 2016950
Alignment:
Q  389 aggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggccc-ctaagaagaagnnnnnnnctataaaaccgtccactaagttttgca 487  Q
    |||||| |||||| |||||||||||||| |||| |||||||||||||||||||| | ||||| ||        ||| ||||| | || ||||||||||||    
T  2016790 aggcttgatagcagttttagccccctaacttttccaaagttgcgattttggccctcaaagaaaaa-----agactacaaaactgccccctaagttttgca 2016884  T
Q  488 cttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    | |||||  ||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||    
T  2016885 catgtggcagttttggcccccaaggccaattttgactcggtctacgctgacgtggcaccctaagtg 2016950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 388 - 570
Target Start/End: Complemental strand, 4796354 - 4796178
Alignment:
Q  388 taggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccctaagaagaagnnnnnnnctataaaaccgtccactaagttttgca 487  Q
    |||||||||||||| |||||||||||||| || | |||| |||| ||||||||||| ||||| ||         |||||||||| ||  |||||||||||    
T  4796354 taggcttaatagcagttttagccccctaacttatccaaaattgcaattttggccccaaagaaaaaaat------tataaaaccgccctttaagttttgca 4796261  T
Q  488 cttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttatt 570  Q
    | |||||  |||||||||||||| |  ||||||||||||||||||||||||||| ||||||||||| | |||||  |||||||    
T  4796260 cctgtggcagttttggcccccaaaatcaattttgactcggtctacgctgacgtggcaccctaagtgaggtgccacttgttatt 4796178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 393 - 553
Target Start/End: Original strand, 51362539 - 51362698
Alignment:
Q  393 ttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccc-taagaagaagnnnnnnnctataaaaccgtccactaagttttgcacttg 491  Q
    ||||||| | |||||||||||||| ||||  |||||||||||||||||||| |||||||||        ||| ||||||| || ||||||||||||  ||    
T  51362539 ttaatagtagttttagccccctaacttttctaaagttgcgattttggccccctaagaagaa--aaaaaactacaaaaccgccccctaagttttgcatatg 51362636  T
Q  492 tggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    |||  ||||||||||||||||| ||||||||||| |||||| |||||||| |||||||||||    
T  51362637 tggcagttttggcccccaagaccaattttgactcagtctacactgacgtggcaccctaagtg 51362698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 390 - 553
Target Start/End: Complemental strand, 10060013 - 10059852
Alignment:
Q  390 ggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccctaagaagaagnnnnnnnctataaaaccgtccactaagttttgcact 489  Q
    |||||||||||| |||||| ||||||| |||||||||||||||||||| |||||| |  ||||        ||| ||||||| || ||||||||||||      
T  10060013 ggcttaatagcagttttagacccctaattttttcaaagttgcgatttttgcccctta--agaaaaaaaaaactacaaaaccgccccctaagttttgcatc 10059916  T
Q  490 tgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    |||||  |||||||||| |||| | ||||||||||||||||||| ||||||| |||||||||||    
T  10059915 tgtggcagttttggccctcaaggccaattttgactcggtctacgttgacgtggcaccctaagtg 10059852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 465 - 577
Target Start/End: Complemental strand, 21597645 - 21597533
Alignment:
Q  465 aaaaccgtccactaagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatat 564  Q
    |||||||||| |||| |||||||  |||||  |||||||||||||| |||||||||||||||||||||||||||||| |||||||| || | |||||  |    
T  21597645 aaaaccgtcccctaaattttgcatatgtggcagttttggcccccaaaactaattttgactcggtctacgctgacgtggcaccctaaatgaggtgccacgt 21597546  T
Q  565 gttattttatttt 577  Q
    |||||||| ||||    
T  21597545 gttattttttttt 21597533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 392 - 572
Target Start/End: Complemental strand, 21871696 - 21871523
Alignment:
Q  392 cttaatagcaattttagccccctaaatttttcaaagttgcgattttg-gcccctaagaagaagnnnnnnnctataaaaccgtccactaagttttgcactt 490  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||  ||||||| || ||        ||| ||||||| |  ||||||||||||  |    
T  21871696 cttaatagcaattttagccccctaactttttcaaagttgcgattttgaccccctaaaaaaaa--------ctacaaaaccgcctcctaagttttgcatct 21871605  T
Q  491 gtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttatttt 572  Q
     |||| |||||||||||||| |  |||||| ||||||||||||||||| |||||| ||||||||| || ||  |||||||||    
T  21871604 ttggtagttttggcccccaaaatcaattttaactcggtctacgctgacatgacactctaagtggggtgtcacgtgttatttt 21871523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 392 - 572
Target Start/End: Complemental strand, 21927557 - 21927384
Alignment:
Q  392 cttaatagcaattttagccccctaaatttttcaaagttgcgattttg-gcccctaagaagaagnnnnnnnctataaaaccgtccactaagttttgcactt 490  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||  ||||||| || ||        ||| ||||||| |  ||||||||||||  |    
T  21927557 cttaatagcaattttagccccctaactttttcaaagttgcgattttgaccccctaaaaaaaa--------ctacaaaaccgcctcctaagttttgcatct 21927466  T
Q  491 gtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttatttt 572  Q
     |||| |||||||||||||| |  |||||| ||||||||||||||||| |||||| ||||||||| || ||  |||||||||    
T  21927465 ttggtagttttggcccccaaaatcaattttaactcggtctacgctgacatgacactctaagtggggtgtcacgtgttatttt 21927384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 386 - 558
Target Start/End: Complemental strand, 6207494 - 6207324
Alignment:
Q  386 aataggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccctaagaagaagnnnnnnnctataaaaccgtccactaagttttg 485  Q
    |||||||||||||||| |||||||||||||| |||   ||||||| |||||||||||||||||||||        ||| ||||||| || ||||||||||    
T  6207494 aataggcttaatagcagttttagccccctaattttcctaaagttgtgattttggcccctaagaagaa--aaaaaactacaaaaccgccccctaagttttg 6207397  T
Q  486 cacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatg 558  Q
    || ||||||   ||||||||||||||   |||||||||| |||||||||| | ||| ||| ||||||| ||||    
T  6207396 catttgtggcaattttggcccccaaggtcaattttgacttggtctacgctaatgtggcactctaagtgagatg 6207324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 390 - 572
Target Start/End: Complemental strand, 14449599 - 14449420
Alignment:
Q  390 ggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccct-aagaagaagnnnnnnnctataaaaccgtccactaagttttgcac 488  Q
    |||||||||| | |||||||||||||| |||| ||||||||||||||||||| || ||| | ||        ||| |||||||  | ||||||||||||     
T  14449599 ggcttaatagtagttttagccccctaacttttccaaagttgcgattttggcctcttaaggaaaa----aaaactacaaaaccgctccctaagttttgcat 14449504  T
Q  489 ttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttatttt 572  Q
    ||||||  ||||||||||||||| | |||||||||||||| |||||||||||| |||| |||||| | |||||  |||||||||    
T  14449503 ttgtggcagttttggcccccaaggccaattttgactcggtttacgctgacgtggcaccataagtgaggtgccacgtgttatttt 14449420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 387 - 553
Target Start/End: Complemental strand, 44356713 - 44356553
Alignment:
Q  387 ataggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcc-cctaagaagaagnnnnnnnctataaaaccgtccactaagttttg 485  Q
    ||||||||||||||| |||||||||| ||| ||| |||||||||||||||||||| |||||||| ||         || ||||||| || ||||||||||    
T  44356713 ataggcttaatagcagttttagcccc-taactttctcaaagttgcgattttggccgcctaagaaaaaaat------tacaaaaccgccccctaagttttg 44356621  T
Q  486 cacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    ||  |||||  ||||||||||||||||| |||||||||| |||||||| | ||||| |||||||||||    
T  44356620 catatgtggcagttttggcccccaagaccaattttgacttggtctacgataacgtggcaccctaagtg 44356553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 386 - 552
Target Start/End: Complemental strand, 8965828 - 8965672
Alignment:
Q  386 aataggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccctaagaagaagnnnnnnnctataaaaccgtccactaagttttg 485  Q
    |||||||||||||||||||||| |||| ||| |||||||||||||||||||||| ||||||||| ||        ||||||||||| || ||||||||||    
T  8965828 aataggcttaatagcaattttaacccc-taattttttcaaagttgcgattttgg-ccctaagaaaaa--------ctataaaaccgccccctaagttttg 8965739  T
Q  486 cacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagt 552  Q
    ||  |||||  ||||||| ||||||    ||||||||||||||||||| ||| ||| ||||||||||    
T  8965738 catctgtggcagttttggtccccaatgtcaattttgactcggtctacgttgatgtggcaccctaagt 8965672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 388 - 553
Target Start/End: Complemental strand, 1420860 - 1420699
Alignment:
Q  388 taggcttaatagcaattttagccccctaaatttttcaaagttgcgattttgg-cccctaagaagaagnnnnnnnctataaaaccgtccactaagttttgc 486  Q
    |||||||||||||| |||||||||| ||| |||  ||||||| ||||||||| |||||||||| |||       ||| ||||||| ||  ||||||||||    
T  1420860 taggcttaatagcagttttagccccttaactttcccaaagttacgattttggtcccctaagaaaaagaa-----ctacaaaaccgccccataagttttgc 1420766  T
Q  487 acttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    | ||||||  ||| || |||||||| | ||||||||||||||| ||||||||||| |||||||||||    
T  1420765 atttgtggcagttatgacccccaaggccaattttgactcggtcaacgctgacgtggcaccctaagtg 1420699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 389 - 572
Target Start/End: Complemental strand, 12719761 - 12719581
Alignment:
Q  389 aggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccc-taagaagaagnnnnnnnctataaaaccgtccactaagttttgca 487  Q
    ||||||||||||| ||||| |||||||| |||  ||||||||  ||||||||||| |||||| ||        ||| ||||||  || ||||||||||||    
T  12719761 aggcttaatagcagttttaaccccctaactttcccaaagttgatattttggccccctaagaaaaa----aaaactacaaaaccaccccctaagttttgca 12719666  T
Q  488 cttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttatttt 572  Q
      |||||  ||||||||| ||||||| ||||||||||||||||||||||| ||| ||||| ||||| | ||||| ||||||||||    
T  12719665 tctgtggcagttttggcctccaagaccaattttgactcggtctacgctgatgtggcaccccaagtgaggtgccacatgttatttt 12719581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 388 - 538
Target Start/End: Complemental strand, 14061019 - 14060873
Alignment:
Q  388 taggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggc-ccctaagaagaagnnnnnnnctataaaaccgtccactaagttttgc 486  Q
    ||||||||||||||  |||| | |||||| ||||||||||||||||||||||| ||||||||| ||        ||| ||||| |||| ||||||||| |    
T  14061019 taggcttaatagcagctttaactccctaattttttcaaagttgcgattttggctccctaagaaaaa-----aaactacaaaactgtcccctaagttttac 14060925  T
Q  487 acttgtggtggttttggcccccaagactaattttgactcggtctacgctgac 538  Q
    |  |||||  ||||||||||||||| ||||||||||||||||||| ||||||    
T  14060924 atctgtggcagttttggcccccaaggctaattttgactcggtctatgctgac 14060873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 388 - 577
Target Start/End: Original strand, 2836897 - 2837082
Alignment:
Q  388 taggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccctaagaagaagnnnnnnnctataaaaccgtccactaagttttgca 487  Q
    ||||||||||| || ||||| |||||||| |||| ||||| ||||||||||||||| ||  ||||        ||| ||||||| || ||||||||||||    
T  2836897 taggcttaataacagttttaaccccctaacttttccaaagctgcgattttggcccccaa--agaa--aaaaaactacaaaaccgccccctaagttttgca 2836992  T
Q  488 cttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttattttatttt 577  Q
      ||||   ||||||||||||||| | ||||||||||| |||||| |||||||| ||||||||||| | |||||  ||||||||| ||||    
T  2836993 tgtgtgagagttttggcccccaaggccaattttgactcagtctacactgacgtggcaccctaagtgaggtgccacgtgttattttttttt 2837082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 476 - 572
Target Start/End: Complemental strand, 43074820 - 43074724
Alignment:
Q  476 ctaagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttatttt 572  Q
    ||||||||||||  |||||  ||||||||||||||| | ||||||||||| ||||||||||||||| ||||||||||| | |||||  |||||||||    
T  43074820 ctaagttttgcatctgtggcagttttggcccccaaggccaattttgactcagtctacgctgacgtggcaccctaagtgaggtgccacgtgttatttt 43074724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 389 - 452
Target Start/End: Original strand, 19909172 - 19909235
Alignment:
Q  389 aggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccctaagaagaa 452  Q
    ||||||||||||| ||||| |||||||| ||| |||||||||||||||||||||||||||||||    
T  19909172 aggcttaatagcagttttaaccccctaactttctcaaagttgcgattttggcccctaagaagaa 19909235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 389 - 553
Target Start/End: Original strand, 21451458 - 21451616
Alignment:
Q  389 aggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggc-ccctaagaagaagnnnnnnnctataaaaccgtccactaagttttgca 487  Q
    ||||||||||||| |||||||| ||||| ||| |||||||||||||||| || |||| |||  ||        ||| |||| ||||  |||| |||||||    
T  21451458 aggcttaatagcagttttagcctcctaactttctcaaagttgcgatttttgctccctgagataaa------aactacaaaaacgtctcctaaattttgca 21451551  T
Q  488 cttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    |||||||  ||||||||| | ||| | |||||||||||||||||| ||||||||||||||||||||    
T  21451552 cttgtggcagttttggccac-aaggcgaattttgactcggtctacactgacgtgacaccctaagtg 21451616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 488 - 572
Target Start/End: Original strand, 49185663 - 49185747
Alignment:
Q  488 cttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttatttt 572  Q
    |||||||  ||||||||||||||| | |||||||||| |||||||||||||||| ||||||||| | | ||||| ||||||||||    
T  49185663 cttgtggcagttttggcccccaaggccaattttgacttggtctacgctgacgtggcaccctaagcgaggtgccacatgttatttt 49185747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 393 - 553
Target Start/End: Original strand, 16292273 - 16292427
Alignment:
Q  393 ttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccctaagaagaagnnnnnnnctataaaaccgtccactaagttttgcacttgt 492  Q
    ||||||| ||||||| |||||||| ||||| |||||||||||||||| |||| | || ||        ||| |||| || || ||||||||||||| |||    
T  16292273 ttaatagtaattttaaccccctaatttttttaaagttgcgattttggtcccttaaaaaaa------aactacaaaatcgccctctaagttttgcacatgt 16292366  T
Q  493 ggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    ||  |||||||||||||    ||||||||||||||||||| |||||||| | |||||||||    
T  16292367 ggcagttttggcccccatatgtaattttgactcggtctacactgacgtggccccctaagtg 16292427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 391 - 449
Target Start/End: Complemental strand, 21957780 - 21957722
Alignment:
Q  391 gcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccctaagaa 449  Q
    ||||||||||| |||||||||||||| |||| ||||||||||||||||||| |||||||    
T  21957780 gcttaatagcagttttagccccctaacttttccaaagttgcgattttggcctctaagaa 21957722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 477 - 547
Target Start/End: Original strand, 27978774 - 27978844
Alignment:
Q  477 taagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccc 547  Q
    ||||||||||| ||||||  |||||| |||||||| | ||||||||||||||||||||||||||| |||||    
T  27978774 taagttttgcatttgtggcagttttgacccccaaggccaattttgactcggtctacgctgacgtggcaccc 27978844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 393 - 571
Target Start/End: Complemental strand, 53925061 - 53924888
Alignment:
Q  393 ttaatagcaattttagccccctaaatttttcaaagttgcgattttgg-cccctaagaagaagnnnnnnnctataaaaccgtccactaagttttgcacttg 491  Q
    |||||| ||||||||||| ||||| ||||  |||||||||||||||| |||||||||| ||        |||||||| |  || |||||||||||| |||    
T  53925061 ttaataacaattttagcctcctaacttttctaaagttgcgattttggtcccctaagaaaaa------aactataaaatctccccctaagttttgcatttg 53924968  T
Q  492 tggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttattt 571  Q
    ||   |||||| ||| ||||   ||||||||||||||||||| ||| ||||||||||||||| |||| ||  ||||||||    
T  53924967 tgacagttttgaccctcaaggtcaattttgactcggtctacgttgatgtgacaccctaagtgagatgtcacgtgttattt 53924888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 392 - 537
Target Start/End: Original strand, 14016722 - 14016868
Alignment:
Q  392 cttaatagcaattttagccccctaaatttttcaaagttgcgattttggcc-cctaagaagaagnnnnnnnctataaaaccgtccactaagttttgcactt 490  Q
    |||||||||  |||||||||||||| |||  ||||||||||||||||||| |||||||| ||        ||| ||||||| ||  ||||||||| | ||    
T  14016722 cttaatagcggttttagccccctaactttcccaaagttgcgattttggcctcctaagaaaaaaaaaaaaactacaaaaccgccccttaagttttgtattt 14016821  T
Q  491 gtggtggttttggcccccaagactaattttgactcggtctacgctga 537  Q
    ||||  ||||||||| ||||| |||||||||||| |||||| |||||    
T  14016822 gtggcagttttggcctccaaggctaattttgacttggtctaggctga 14016868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 389 - 578
Target Start/End: Complemental strand, 23759888 - 23759705
Alignment:
Q  389 aggcttaatagcaattttagccccctaaatttttcaaagttgcgattttgg-cccctaagaagaagnnnnnnnctataaaaccgtccactaagttttgca 487  Q
    |||||||||| |||||||| |||| ||| |||   |||||||||||||||| |||||||||| ||        ||| |||||||||| |||||||||| |    
T  23759888 aggcttaataacaattttaaccccttaactttcataaagttgcgattttggtcccctaagaaaaa------aactacaaaaccgtcccctaagttttgta 23759795  T
Q  488 cttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttattttattttt 578  Q
      ||||   ||||||||| ||||| | |||||||||||| |||| ||||||||| ||||||||||| | |||||  |||| ||||||||||    
T  23759794 tctgtgacagttttggcctccaaggccaattttgactcgatctaagctgacgtggcaccctaagtgaggtgccacgtgtt-ttttattttt 23759705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 476 - 552
Target Start/End: Complemental strand, 2654201 - 2654125
Alignment:
Q  476 ctaagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagt 552  Q
    ||||||||||||  |||||  |||||| |||||||| | |||||||||| |||||||||||||||| ||||||||||    
T  2654201 ctaagttttgcatatgtggcagttttgacccccaaggccaattttgacttggtctacgctgacgtggcaccctaagt 2654125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 390 - 570
Target Start/End: Complemental strand, 20112463 - 20112288
Alignment:
Q  390 ggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccctaagaagaagnnnnnnnctataaaaccgtccactaagttttgcact 489  Q
    ||||||||| || ||||||||  |||| |||| ||||||||||||||||||||| ||  ||||        ||| ||||||| || | ||||||||||      
T  20112463 ggcttaataacagttttagccttctaacttttccaaagttgcgattttggcccccaa--agaa---aaatactacaaaaccgcccccaaagttttgcata 20112369  T
Q  490 tgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttatt 570  Q
    |||||  ||||||||||||||  | ||||||||||||||| ||||||||||| ||| ||||||| | |||||  |||||||    
T  20112368 tgtggcagttttggcccccaaagccaattttgactcggtcaacgctgacgtggcactctaagtgaggtgccacgtgttatt 20112288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 477 - 572
Target Start/End: Complemental strand, 6637294 - 6637199
Alignment:
Q  477 taagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttatttt 572  Q
    ||||||||||| || |||  |||||||||| |||  | |||||||||||||||||| ||||| || ||||||||||| | ||||| ||||||||||    
T  6637294 taagttttgcatttctggcagttttggcccacaatgccaattttgactcggtctacactgacatggcaccctaagtgaggtgccacatgttatttt 6637199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 492 - 571
Target Start/End: Original strand, 54855401 - 54855480
Alignment:
Q  492 tggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttattt 571  Q
    |||| ||||||| ||||||  | ||||||||||||||||||||||||||| ||||||||||| | |||||  ||||||||    
T  54855401 tggtagttttggtccccaaagccaattttgactcggtctacgctgacgtggcaccctaagtgaggtgccacttgttattt 54855480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 388 - 442
Target Start/End: Original strand, 4796034 - 4796088
Alignment:
Q  388 taggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggccc 442  Q
    |||||||||||||| |||||| ||||||| ||||||||| |||||||||||||||    
T  4796034 taggcttaatagcatttttagtcccctaactttttcaaaattgcgattttggccc 4796088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 515 - 569
Target Start/End: Complemental strand, 6615037 - 6614983
Alignment:
Q  515 aattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttat 569  Q
    |||||||||||||||||||||||| |||||||||||||| | ||||| |||||||    
T  6615037 aattttgactcggtctacgctgacatgacaccctaagtgaggtgccacatgttat 6614983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 390 - 444
Target Start/End: Original strand, 42525965 - 42526019
Alignment:
Q  390 ggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccct 444  Q
    |||||||||||||||||||| |||||| ||||| |||||||| ||||||||||||    
T  42525965 ggcttaatagcaattttagctccctaatttttttaaagttgcaattttggcccct 42526019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 390 - 444
Target Start/End: Complemental strand, 43074880 - 43074826
Alignment:
Q  390 ggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccct 444  Q
    ||||||||||||||||||||||||||| |||  |||||||||||||||| |||||    
T  43074880 ggcttaatagcaattttagccccctaactttcccaaagttgcgattttgacccct 43074826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 392 - 441
Target Start/End: Original strand, 1420537 - 1420586
Alignment:
Q  392 cttaatagcaattttagccccctaaatttttcaaagttgcgattttggcc 441  Q
    |||||||||| |||||||||||||| |||| |||||||||||||||||||    
T  1420537 cttaatagcagttttagccccctaacttttccaaagttgcgattttggcc 1420586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 392 - 553
Target Start/End: Complemental strand, 20118218 - 20118058
Alignment:
Q  392 cttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccct-aagaagaagnnnnnnnctataaaaccgtccactaagttttgcactt 490  Q
    ||||||||||||||||||||| ||| ||||  ||||||| ||||||||||||| ||||||||        ||| |||||   ||   ||||||||||  |    
T  20118218 cttaatagcaattttagccccttaacttttataaagttgtgattttggccccttaagaagaa--aaaaaactacaaaacaacccctgaagttttgcatat 20118121  T
Q  491 gtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    |||   ||||||||||||||||| |||||||| ||| ||||||| |||||| |||||||||||    
T  20118120 gtgccagttttggcccccaagaccaattttgattcgatctacgcggacgtggcaccctaagtg 20118058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 476 - 553
Target Start/End: Complemental strand, 35383991 - 35383914
Alignment:
Q  476 ctaagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    ||||||||||||||  |||  ||||||||||||||| | |||||||| |||||||||| ||||||| |||| ||||||    
T  35383991 ctaagttttgcactattggcagttttggcccccaaggccaattttgattcggtctacgttgacgtggcaccgtaagtg 35383914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 390 - 439
Target Start/End: Complemental strand, 52463101 - 52463052
Alignment:
Q  390 ggcttaatagcaattttagccccctaaatttttcaaagttgcgattttgg 439  Q
    ||||||||| || |||||||||||||| ||||||||||||||||||||||    
T  52463101 ggcttaataacagttttagccccctaattttttcaaagttgcgattttgg 52463052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 497 - 577
Target Start/End: Original strand, 8070728 - 8070808
Alignment:
Q  497 gttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttattttatttt 577  Q
    |||||||||||| |||  |||||| ||| |||||||||||||||| ||||| ||||| | |||||  ||||||||||||||    
T  8070728 gttttggccccctagatcaattttaacttggtctacgctgacgtggcaccccaagtgaggtgccacgtgttattttatttt 8070808  T

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Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 393 - 449
Target Start/End: Original strand, 11983465 - 11983521
Alignment:
Q  393 ttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccctaagaa 449  Q
    ||||||| | |||||| ||| ||| ||||||||||||||||||||||||||||||||    
T  11983465 ttaatagtagttttagtcccttaattttttcaaagttgcgattttggcccctaagaa 11983521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 497 - 553
Target Start/End: Complemental strand, 31553453 - 31553397
Alignment:
Q  497 gttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    ||||||||||||||| | ||||||||||||||||||||| ||| | |||||||||||    
T  31553453 gttttggcccccaaggccaattttgactcggtctacgctaacgcggcaccctaagtg 31553397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 391 - 443
Target Start/End: Original strand, 35615315 - 35615367
Alignment:
Q  391 gcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccc 443  Q
    ||||||||||| |||||||||||||| ||||  ||||||||||||||||||||    
T  35615315 gcttaatagcagttttagccccctaacttttctaaagttgcgattttggcccc 35615367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 383 - 443
Target Start/End: Original strand, 43074609 - 43074669
Alignment:
Q  383 tataataggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccc 443  Q
    ||||| |||||||||||||||||| ||||||||| |||  | |||||||||||||||||||    
T  43074609 tataaaaggcttaatagcaattttcgccccctaactttcacgaagttgcgattttggcccc 43074669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 497 - 572
Target Start/End: Original strand, 35393403 - 35393478
Alignment:
Q  497 gttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttatttt 572  Q
    ||||||||||||||| | |||||||||| | |||| ||||| ||| ||||||||||| | ||||| ||||||||||    
T  35393403 gttttggcccccaagcccaattttgacttgttctatgctgatgtggcaccctaagtgaggtgccacatgttatttt 35393478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 389 - 443
Target Start/End: Original strand, 1186657 - 1186711
Alignment:
Q  389 aggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccc 443  Q
    ||||||||| ||| |||| ||||||||| ||||| ||||||||||||||||||||    
T  1186657 aggcttaattgcacttttggccccctaactttttaaaagttgcgattttggcccc 1186711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 519 - 561
Target Start/End: Original strand, 41707843 - 41707885
Alignment:
Q  519 ttgactcggtctacgctgacgtgacaccctaagtgggatgcca 561  Q
    ||||||||||| ||||||||||||||||||||||| |||||||    
T  41707843 ttgactcggtcaacgctgacgtgacaccctaagtgagatgcca 41707885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 476 - 553
Target Start/End: Original strand, 51233562 - 51233639
Alignment:
Q  476 ctaagttttgcacttgtggtg-gttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    |||||||||||||| ||||   ||||||||||||||| | ||||| |||| |||||||||||||||| |||||||||||    
T  51233562 ctaagttttgcactcgtggacagttttggcccccaagcc-aatttggacttggtctacgctgacgtggcaccctaagtg 51233639  T

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Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 392 - 449
Target Start/End: Original strand, 8070630 - 8070687
Alignment:
Q  392 cttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccctaagaa 449  Q
    |||||||||| ||||| |||||||| |||| ||||||||| | |||||||||||||||    
T  8070630 cttaatagcagttttaaccccctaacttttccaaagttgcaactttggcccctaagaa 8070687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 394 - 443
Target Start/End: Original strand, 14060760 - 14060809
Alignment:
Q  394 taatagcaattttagccccctaaatttttcaaagttgcgattttggcccc 443  Q
    |||||||| ||||| |||||||| ||||||||||||||||||||| ||||    
T  14060760 taatagcagttttaaccccctaactttttcaaagttgcgattttgacccc 14060809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 492 - 541
Target Start/End: Complemental strand, 38829966 - 38829917
Alignment:
Q  492 tggtggttttggcccccaagactaattttgactcggtctacgctgacgtg 541  Q
    |||| |||||||||||| |||| ||||||||||||||| |||||||||||    
T  38829966 tggtagttttggccccctagaccaattttgactcggtcaacgctgacgtg 38829917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 476 - 572
Target Start/End: Original strand, 11824270 - 11824365
Alignment:
Q  476 ctaagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttatttt 572  Q
    ||||||||||||  |||||  ||||||| ||| ||| | ||||||||||| ||||||||||| ||| ||||||||||| | |||||  |||||||||    
T  11824270 ctaagttttgcatgtgtggcagttttggtccc-aaggccaattttgactcagtctacgctgatgtggcaccctaagtgaggtgccaattgttatttt 11824365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 497 - 541
Target Start/End: Complemental strand, 33168023 - 33167979
Alignment:
Q  497 gttttggcccccaagactaattttgactcggtctacgctgacgtg 541  Q
    |||||||||||| |||| ||||||||||||||| |||||||||||    
T  33168023 gttttggccccctagaccaattttgactcggtcaacgctgacgtg 33167979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 519 - 578
Target Start/End: Complemental strand, 35083769 - 35083709
Alignment:
Q  519 ttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgt-tattttattttt 578  Q
    ||||||||||| ||||||||||||||||||||||| | ||||| ||||  |||||||||||    
T  35083769 ttgactcggtcaacgctgacgtgacaccctaagtgaggtgccacatgtcaattttattttt 35083709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 516 - 572
Target Start/End: Complemental strand, 42526155 - 42526099
Alignment:
Q  516 attttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttatttt 572  Q
    |||||||||| |||||| |||||||||||||||||||| | |||||  |||||||||    
T  42526155 attttgactcagtctacactgacgtgacaccctaagtgaggtgccacgtgttatttt 42526099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 497 - 545
Target Start/End: Complemental strand, 44271889 - 44271841
Alignment:
Q  497 gttttggcccccaagactaattttgactcggtctacgctgacgtgacac 545  Q
    |||||||||||| |||| ||||||||||||||| |||||||||| ||||    
T  44271889 gttttggccccctagaccaattttgactcggtcaacgctgacgtcacac 44271841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 497 - 553
Target Start/End: Complemental strand, 52462999 - 52462943
Alignment:
Q  497 gttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    |||||||||||||| || |||||| || |||||||| |||||||||||||| |||||    
T  52462999 gttttggcccccaaaaccaattttaacccggtctacactgacgtgacacccaaagtg 52462943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 506 - 553
Target Start/End: Complemental strand, 18937442 - 18937395
Alignment:
Q  506 cccaagactaattttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    |||||||| |||||| |||||||||| ||||||||| |||||||||||    
T  18937442 cccaagaccaatttttactcggtctatgctgacgtgccaccctaagtg 18937395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 515 - 578
Target Start/End: Complemental strand, 54984026 - 54983963
Alignment:
Q  515 aattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttattttattttt 578  Q
    ||||||| || |||||||||||||||| ||||||||||| | ||||  |||||||||| |||||    
T  54984026 aattttggcttggtctacgctgacgtggcaccctaagtgaggtgccccatgttattttcttttt 54983963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 519 - 553
Target Start/End: Original strand, 5344395 - 5344429
Alignment:
Q  519 ttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    ||||||||||| |||||||||||||||||||||||    
T  5344395 ttgactcggtcaacgctgacgtgacaccctaagtg 5344429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 519 - 577
Target Start/End: Original strand, 20466510 - 20466568
Alignment:
Q  519 ttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttattttatttt 577  Q
    ||||||||||| ||||||||||| ||||||||||| | |||||| ||| | ||||||||    
T  20466510 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccatgtgtcaatttatttt 20466568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 519 - 577
Target Start/End: Original strand, 20473836 - 20473894
Alignment:
Q  519 ttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttattttatttt 577  Q
    ||||||||||| ||||||||||| ||||||||||| | |||||| ||| | ||||||||    
T  20473836 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccatgtgtcaatttatttt 20473894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 389 - 443
Target Start/End: Original strand, 21957538 - 21957592
Alignment:
Q  389 aggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccc 443  Q
    |||||||||| || ||||||| |||||| ||| ||||||||||||||||| ||||    
T  21957538 aggcttaatatcagttttagctccctaactttctcaaagttgcgattttgacccc 21957592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 393 - 443
Target Start/End: Original strand, 37831595 - 37831645
Alignment:
Q  393 ttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccc 443  Q
    ||||||||| |||||||||||||| ||||   |||||||||||||||||||    
T  37831595 ttaatagcagttttagccccctaagttttaagaagttgcgattttggcccc 37831645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 390 - 520
Target Start/End: Complemental strand, 50769675 - 50769551
Alignment:
Q  390 ggcttaatagcaattttagccccctaaatttttcaaagttgcgattttgg-cccctaagaagaagnnnnnnnctataaaaccgtccactaagttttgcac 488  Q
    ||||||| |||| |||| ||||||||| |||| | ||||||||||||||| ||||||| || ||        ||||||||||| | |||||||||||||     
T  50769675 ggcttaaaagcagttttcgccccctaacttttacgaagttgcgattttggccccctaaaaaaaa-------actataaaaccgcctactaagttttgcaa 50769583  T
Q  489 ttgtggtggttttggcccccaagactaatttt 520  Q
     ||| |  ||||||||||||||||| ||||||    
T  50769582 ctgtagcagttttggcccccaagaccaatttt 50769551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 519 - 553
Target Start/End: Complemental strand, 51537620 - 51537586
Alignment:
Q  519 ttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    ||||||||||| |||||||||||||||||||||||    
T  51537620 ttgactcggtcaacgctgacgtgacaccctaagtg 51537586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 519 - 553
Target Start/End: Complemental strand, 51537804 - 51537770
Alignment:
Q  519 ttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    ||||||||||| |||||||||||||||||||||||    
T  51537804 ttgactcggtcaacgctgacgtgacaccctaagtg 51537770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 519 - 553
Target Start/End: Original strand, 51696661 - 51696695
Alignment:
Q  519 ttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    ||||||||||| |||||||||||||||||||||||    
T  51696661 ttgactcggtcaacgctgacgtgacaccctaagtg 51696695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 519 - 553
Target Start/End: Original strand, 54607012 - 54607046
Alignment:
Q  519 ttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    ||||||||||| |||||||||||||||||||||||    
T  54607012 ttgactcggtcaacgctgacgtgacaccctaagtg 54607046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 441
Target Start/End: Complemental strand, 2017104 - 2017051
Alignment:
Q  388 taggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcc 441  Q
    |||||||||||||| |||||||||| ||| |||   ||||||||||||||||||    
T  2017104 taggcttaatagcagttttagccccataactttcctaaagttgcgattttggcc 2017051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 390 - 443
Target Start/End: Original strand, 2653953 - 2654006
Alignment:
Q  390 ggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccc 443  Q
    |||||||||||| |||| ||| ||||| |||| | |||||||||||||||||||    
T  2653953 ggcttaatagcagtttttgcctcctaacttttacgaagttgcgattttggcccc 2654006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 476 - 561
Target Start/End: Complemental strand, 21322943 - 21322858
Alignment:
Q  476 ctaagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgcca 561  Q
    ||||||||||||  ||||   |||||| |||||||  | ||||||||||||||||||||| ||| ||||| |||| || |||||||    
T  21322943 ctaagttttgcatatgtgacagttttgacccccaatgccaattttgactcggtctacgctaacgcgacactctaaatgagatgcca 21322858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 476 - 553
Target Start/End: Complemental strand, 34567848 - 34567771
Alignment:
Q  476 ctaagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    ||||||||||||  |||||  ||||||||||||||    ||||| ||||||||| | ||||||||||||||| |||||    
T  34567848 ctaagttttgcatatgtggcagttttggcccccaatgtcaatttcgactcggtcaatgctgacgtgacacccaaagtg 34567771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 443
Target Start/End: Original strand, 40489207 - 40489264
Alignment:
Q  386 aataggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccc 443  Q
    |||| ||||||| ||| |||||||||||||  ||| | ||||||||||||||||||||    
T  40489207 aatatgcttaattgcacttttagccccctatctttctaaaagttgcgattttggcccc 40489264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 497 - 541
Target Start/End: Complemental strand, 1140516 - 1140472
Alignment:
Q  497 gttttggcccccaagactaattttgactcggtctacgctgacgtg 541  Q
    |||||||||||| |||| ||||||||||| ||| |||||||||||    
T  1140516 gttttggccccctagaccaattttgactcagtcaacgctgacgtg 1140472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 497 - 553
Target Start/End: Complemental strand, 7666408 - 7666352
Alignment:
Q  497 gttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    ||||||| |||| |||| | | ||||||||||| ||||||||||| |||||||||||    
T  7666408 gttttggacccccagaccattgttgactcggtcaacgctgacgtggcaccctaagtg 7666352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 497 - 537
Target Start/End: Complemental strand, 12893190 - 12893150
Alignment:
Q  497 gttttggcccccaagactaattttgactcggtctacgctga 537  Q
    ||||||||||||||||| |||||||||| ||||| ||||||    
T  12893190 gttttggcccccaagaccaattttgacttggtcttcgctga 12893150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 441
Target Start/End: Original strand, 29697527 - 29697575
Alignment:
Q  393 ttaatagcaattttagccccctaaatttttcaaagttgcgattttggcc 441  Q
    ||||||||| |||||| || ||||| || ||||||||||||||||||||    
T  29697527 ttaatagcagttttagtcctctaaaattatcaaagttgcgattttggcc 29697575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 465 - 553
Target Start/End: Original strand, 29697593 - 29697680
Alignment:
Q  465 aaaaccgtccactaagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    ||||||| || ||||||||||||  |||||  |||||||  || ||| | ||||||||| | ||||||||||||||| |||||||||||    
T  29697593 aaaaccgccccctaagttttgcatctgtggcagttttggttcc-aaggccaattttgacccagtctacgctgacgtggcaccctaagtg 29697680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 497 - 545
Target Start/End: Original strand, 29775463 - 29775511
Alignment:
Q  497 gttttggcccccaagactaattttgactcggtctacgctgacgtgacac 545  Q
    |||||| ||||| |||| ||||||||||||||| | |||||||||||||    
T  29775463 gttttgaccccctagaccaattttgactcggtcaatgctgacgtgacac 29775511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 497 - 553
Target Start/End: Original strand, 47999632 - 47999688
Alignment:
Q  497 gttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    |||||| |||| ||| | |||||||| |||||||||||||||||| |||| ||||||    
T  47999632 gttttgacccctaaggccaattttgattcggtctacgctgacgtggcaccttaagtg 47999688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 497 - 541
Target Start/End: Complemental strand, 53061759 - 53061715
Alignment:
Q  497 gttttggcccccaagactaattttgactcggtctacgctgacgtg 541  Q
    |||||| ||||| |||| ||||||||||||||| |||||||||||    
T  53061759 gttttgaccccctagaccaattttgactcggtcaacgctgacgtg 53061715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 519 - 578
Target Start/End: Complemental strand, 54216145 - 54216085
Alignment:
Q  519 ttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgt-tattttattttt 578  Q
    ||||||||||| ||||||||||| ||||||||||| | ||||| ||||  |||||||||||    
T  54216145 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacatgtcaattttattttt 54216085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 519 - 578
Target Start/End: Original strand, 55586741 - 55586801
Alignment:
Q  519 ttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgt-tattttattttt 578  Q
    ||||||||||| ||||||||||| ||||||||||| | ||||| ||||  |||||||||||    
T  55586741 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacatgtcaattttattttt 55586801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 98; Significance: 5e-48; HSPs: 59)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 15 - 199
Target Start/End: Complemental strand, 40421911 - 40421725
Alignment:
Q  15 agttactaccggctacttttggctggttacaattttgatttttacagtt---gagttttggttgaggacctgttgatgaatgtaactgggaccacgatga 111  Q
    ||||||||||||||| ||  |||||||| ||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||  ||||||    
T  40421911 agttactaccggctatttggggctggttgcaattttgatttttacagtttttgagttttggttgaggacctgttgatgaatgtaactgggactgcgatga 40421812  T
Q  112 tgggtctctgtgaaaatttgtacttgggtctagttcaaaagtactactattttggcttcagattgatccttaatgtcaaaagcacttc 199  Q
     || | |  |||||||||||||||||| ||||||||||||||| | ||||||||||| || |||| | ||||||||||||||||||||    
T  40421811 cggtttta-gtgaaaatttgtacttggatctagttcaaaagtatttctattttggctgcaaattggttcttaatgtcaaaagcacttc 40421725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 388 - 571
Target Start/End: Complemental strand, 27904799 - 27904620
Alignment:
Q  388 taggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccc-taagaagaagnnnnnnnctataaaaccgtccactaagttttgc 486  Q
    |||||||||||||| ||||||||| |||| |||||||||||||||||||||||||| |||||| ||        ||| ||||||| || |||||||||||    
T  27904799 taggcttaatagcagttttagccctctaactttttcaaagttgcgattttggccccgtaagaaaaa-----aaactacaaaaccgccccctaagttttgc 27904705  T
Q  487 acttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttattt 571  Q
    ||||||||  |||||| |||||||||| ||||||||||||||||||||||||||| ||||||||||| | |||||  ||||||||    
T  27904704 acttgtggcagttttgtcccccaagaccaattttgactcggtctacgctgacgtggcaccctaagtgaggtgccacgtgttattt 27904620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 389 - 572
Target Start/End: Complemental strand, 12406355 - 12406176
Alignment:
Q  389 aggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccctaagaagaagnnnnnnnctataaaaccgtccactaagttttgcac 488  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| ||        | | ||||||| || ||||||||| ||     
T  12406355 aggcttaatagcaattttagccccctaactttttcaaagttgagattttggcccctaagaaaaa----aaaacaacaaaaccgccccctaagttttacat 12406260  T
Q  489 ttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttatttt 572  Q
     |||||  ||||||||||||||| | ||||||||||| ||||||||||||||| ||||||||||| | |||||  |||||||||    
T  12406259 ctgtggcagttttggcccccaaggccaattttgactcagtctacgctgacgtggcaccctaagtgaggtgccacgtgttatttt 12406176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 390 - 569
Target Start/End: Complemental strand, 3334015 - 3333840
Alignment:
Q  390 ggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccc-taagaagaagnnnnnnnctataaaaccg-tccactaagttttgca 487  Q
    |||||||||| | |||||||||||||| |||| ||||||||||||||||||||| |||||||||        ||| ||||||| |||| |||||||||||    
T  3334015 ggcttaatagtagttttagccccctaacttttccaaagttgcgattttggccccctaagaagaa-----aaactacaaaaccgctcca-taagttttgca 3333922  T
Q  488 cttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttat 569  Q
      |||||  |||||||||||||||   ||||||||||||||||||||||||||| ||||||||||| | |||||| ||||||    
T  3333921 tatgtggcagttttggcccccaaggtcaattttgactcggtctacgctgacgtggcaccctaagtgaggtgccatgtgttat 3333840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 393 - 572
Target Start/End: Original strand, 20512197 - 20512374
Alignment:
Q  393 ttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccctaagaagaagnnnnnnnctataaaaccgtccactaagttttgcacttgt 492  Q
    ||||||||| |||||||||| ||| ||||||||||| | ||||||| ||||| |||||||         || ||||| | || ||||||||||||| |||    
T  20512197 ttaatagcagttttagccccttaattttttcaaagtcgtgattttgaccccttagaagaaaaaaaaa--tacaaaactgccccctaagttttgcacctgt 20512294  T
Q  493 ggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttatttt 572  Q
    ||| |||||| |||||||||| ||||||||||||||||||||| || || ||||||||||| | |||||  |||||||||    
T  20512295 ggtagttttgacccccaagaccaattttgactcggtctacgctaacatggcaccctaagtgaggtgccacgtgttatttt 20512374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 378 - 572
Target Start/End: Complemental strand, 40276356 - 40276165
Alignment:
Q  378 ttatttataataggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccc-taagaagaagnnnnnnnctataaaaccgtccac 476  Q
    ||||||| || ||||||||||||| ||||| |||||||| |||  |||| ||||||||||  |||| |||||| ||        ||| |||||||||| |    
T  40276356 ttatttagaaaaggcttaatagcagttttatccccctaactttcccaaatttgcgattttaaccccctaagaaaaa----aaaactacaaaaccgtcccc 40276261  T
Q  477 taagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttatttt 572  Q
    |||||||||||  |||||   ||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||| | ||||| ||||| ||||    
T  40276260 taagttttgcatatgtggcaattttgacccccaaggctaattttgacccggtctacgctgacgtgacaccctaagtgaggtgccacatgttttttt 40276165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 392 - 572
Target Start/End: Complemental strand, 20630057 - 20629880
Alignment:
Q  392 cttaatagcaattttagcc-ccctaaatttttcaaagttgcgattttggcccct-aagaagaagnnnnnnnctataaaaccgtccactaagttttgcact 489  Q
    |||||||||| |||||||| |||||| |||| |||||||| ||||||||||||| ||||| ||        ||| ||||||| || |||||||||||| |    
T  20630057 cttaatagcagttttagcctccctaacttttccaaagttgtgattttggccccttaagaaaaa-----aaactacaaaaccgccccctaagttttgcatt 20629963  T
Q  490 tgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttatttt 572  Q
    |||||  ||||||||| ||| ||| |||||||||||| |||||||||||||| ||||||||||| | |||||  |||||||||    
T  20629962 tgtggaagttttggcctccaggaccaattttgactcgatctacgctgacgtggcaccctaagtgaggtgccacgtgttatttt 20629880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 392 - 553
Target Start/End: Complemental strand, 37898029 - 37897873
Alignment:
Q  392 cttaatagcaattttagccccctaaatttttcaaagttgcgattttgg-cccctaagaagaagnnnnnnnctataaaaccgtccactaagttttgcactt 490  Q
    |||||||||| |||||||||||||| |||||||||||||||||||||| |||||||||| ||        ||| ||||||| || ||||||||||||  |    
T  37898029 cttaatagcagttttagccccctaactttttcaaagttgcgattttggccccctaagaaaaa-----aaactacaaaaccg-cccctaagttttgcatat 37897936  T
Q  491 gtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    ||||  ||||||||| ||||||| ||||||||||||||||| ||||||||  |||| ||||||    
T  37897935 gtggcagttttggcctccaagaccaattttgactcggtctatgctgacgtagcaccttaagtg 37897873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 225 - 389
Target Start/End: Complemental strand, 40421725 - 40421561
Alignment:
Q  225 cattttgaacaatattaattattcattcccttattcgacatctttgatccatttaccgagtttcat--tggcagtgatttttctctactatttctcatct 322  Q
    |||||| ||||| ||||||||||||||||||||||||||||||| ||||| ||| | |||||||||  | ||| ||||||||||||| || || || |      
T  40421725 cattttaaacaacattaattattcattcccttattcgacatcttagatccgttttctgagtttcattctcgcattgatttttctcta-tagttatc-tta 40421628  T
Q  323 tctgaataatcggatacagcaacaatttgtcaatgaattagtcaatcttgtgtcattatttataata 389  Q
    ||  ||||||||||| ||| |||||||||| |||||||| |||||| |||||||||| || ||||||    
T  40421627 tcccaataatcggatgcagtaacaatttgtgaatgaattggtcaattttgtgtcatttttaataata 40421561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 465 - 572
Target Start/End: Original strand, 2974704 - 2974811
Alignment:
Q  465 aaaaccgtccactaagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatat 564  Q
    ||||||| || ||||||||||||  |||||  ||||||||||||||  | ||||||||||||||||||||||||||| ||||||||||| | ||||| ||    
T  2974704 aaaaccgccccctaagttttgcatctgtggcagttttggcccccaatgccaattttgactcggtctacgctgacgtggcaccctaagtgaggtgccacat 2974803  T
Q  565 gttatttt 572  Q
    || |||||    
T  2974804 gtaatttt 2974811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 478 - 577
Target Start/End: Original strand, 26702519 - 26702618
Alignment:
Q  478 aagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttattttatttt 577  Q
    |||||||||| ||||||  ||||||||||||||||| |||||||| ||||||||  |||||||| ||||||||||| | |||||  ||||||||||||||    
T  26702519 aagttttgcatttgtggcagttttggcccccaagaccaattttgattcggtctatcctgacgtggcaccctaagtgaggtgccacgtgttattttatttt 26702618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 478 - 577
Target Start/End: Original strand, 26972252 - 26972351
Alignment:
Q  478 aagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttattttatttt 577  Q
    |||||||||| ||||||  ||||||||||||||||| |||||||| ||||||||  |||||||| ||||||||||| | |||||  ||||||||||||||    
T  26972252 aagttttgcatttgtggcagttttggcccccaagaccaattttgattcggtctatcctgacgtggcaccctaagtgaggtgccacgtgttattttatttt 26972351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 389 - 572
Target Start/End: Original strand, 36798169 - 36798348
Alignment:
Q  389 aggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccc-taagaagaagnnnnnnnctataaaaccgtccactaagttttgca 487  Q
    ||||||||||||| |||||| ||| ||| |||| ||||||||| ||||||||||| |||||| ||        ||| ||||||  || ||||||||||||    
T  36798169 aggcttaatagcagttttagacccttaacttttccaaagttgcaattttggccccctaagaaaaa----aaaactacaaaaccaccccctaagttttgca 36798264  T
Q  488 cttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttatttt 572  Q
      |||||  ||||||||||||||||| ||||| |||||||||||| |||||||| ||| ||||||| | ||||| ||||||||||    
T  36798265 tctgtggcagttttggcccccaagaccaattt-gactcggtctacactgacgtggcactctaagtgaggtgccacatgttatttt 36798348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 476 - 578
Target Start/End: Original strand, 31080558 - 31080660
Alignment:
Q  476 ctaagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttattttatt 575  Q
    ||||||||||||  |||||  ||||||||||||||| | |||||| |||||||||| ||||||||| ||||||||||| | |||||  ||||||||||||    
T  31080558 ctaagttttgcatctgtggcagttttggcccccaaggccaattttaactcggtctatgctgacgtggcaccctaagtgaggtgccacgtgttattttatt 31080657  T
Q  576 ttt 578  Q
    |||    
T  31080658 ttt 31080660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 390 - 572
Target Start/End: Complemental strand, 32392033 - 32391855
Alignment:
Q  390 ggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccc-taagaagaagnnnnnnnctataaaaccgtccactaagttttgcac 488  Q
    |||||||||||  ||||| | |||||| |||||||||||||||||||| ||||| |||||| ||        ||| ||||||| ||  |||||||||||     
T  32392033 ggcttaatagctgttttaactccctaactttttcaaagttgcgattttagccccctaagaaaaa-----aaactacaaaaccgccccttaagttttgcat 32391939  T
Q  489 ttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttatttt 572  Q
     ||||   |||||| |  ||||||| ||||||||||||||||||||||||||| ||||||||||| | ||||| ||||||||||    
T  32391938 gtgtgacagttttgacatccaagaccaattttgactcggtctacgctgacgtggcaccctaagtgaggtgccacatgttatttt 32391855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 386 - 578
Target Start/End: Original strand, 39574235 - 39574419
Alignment:
Q  386 aataggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggc-ccctaagaagaagnnnnnnnctataaaaccgtccactaagtttt 484  Q
    |||| ||||||||||| |||| |||| |||| |||  | |||||||||||||||| ||||||||| ||        |||||||| |  || |||||||||    
T  39574235 aataagcttaatagcagttttcgccctctaactttcacgaagttgcgattttggctccctaagaaaaa------aactataaaatcaccccctaagtttt 39574328  T
Q  485 gcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttattttattttt 578  Q
    |||  |||||  ||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||   ||||| |||||||||| |||||    
T  39574329 gca--tgtggcagttttggcccccaagaccaattt-gactcggtctacgctgacgtgacaccataagtgacgtgccacatgttattttcttttt 39574419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 390 - 550
Target Start/End: Original strand, 25363825 - 25363981
Alignment:
Q  390 ggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcc-cctaagaagaagnnnnnnnctataaaaccgtccactaagttttgcac 488  Q
    |||||||||||| |||||||||| ||| ||||| ||||||| |||||||||| |||||||| ||         || ||||| |||| ||||||||||||     
T  25363825 ggcttaatagcagttttagcccc-taacttttttaaagttgtgattttggcctcctaagaaaaaaaagt----tacaaaactgtcccctaagttttgcaa 25363919  T
Q  489 ttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaa 550  Q
    ||||||| ||||||||||| ||    |||||||| |||||||||||||||||||||||||||    
T  25363920 ttgtggtagttttggccccaaaagtcaattttgattcggtctacgctgacgtgacaccctaa 25363981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 476 - 572
Target Start/End: Original strand, 25910805 - 25910901
Alignment:
Q  476 ctaagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttatttt 572  Q
    |||| |||||||| |||||  |||||||||||||||   ||||||||||||||||||||||||||| ||||||||||| | || || ||||||||||    
T  25910805 ctaaattttgcacctgtggcagttttggcccccaaggtcaattttgactcggtctacgctgacgtggcaccctaagtgaggtgtcacatgttatttt 25910901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 389 - 572
Target Start/End: Original strand, 22300600 - 22300778
Alignment:
Q  389 aggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggc-ccctaagaagaagnnnnnnnctataaaaccgtccactaagttttgca 487  Q
    ||||||||||| | ||||||||| |||| ||||  ||||||||||||||||| |||||| || ||        ||| ||||||||||  ||||||||| |    
T  22300600 aggcttaatagtagttttagccctctaacttttctaaagttgcgattttggcaccctaaaaaaaa------aactacaaaaccgtcccttaagttttgta 22300693  T
Q  488 cttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttatttt 572  Q
      |||||  |||||| |  ||||||| ||||||||||||||||||| ||||||| ||||||||||| | ||||| ||||||||||    
T  22300694 tatgtggcagttttgacttccaagaccaattttgactcggtctacgttgacgtggcaccctaagtgaggtgccacatgttatttt 22300778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 462 - 572
Target Start/End: Complemental strand, 3999344 - 3999234
Alignment:
Q  462 tataaaaccgtccactaagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgcca 561  Q
    |||||||||||   ||||||||| ||  |||||  ||||||||||||||| | |||||||||| |||||||||||||||| |||| |||||| | |||||    
T  3999344 tataaaaccgtatcctaagttttacatatgtggcagttttggcccccaaggccaattttgacttggtctacgctgacgtggcaccttaagtgaggtgcca 3999245  T
Q  562 tatgttatttt 572  Q
     ||||||||||    
T  3999244 catgttatttt 3999234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 476 - 570
Target Start/End: Original strand, 35166377 - 35166471
Alignment:
Q  476 ctaagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttatt 570  Q
    ||||||||||||| ||||| ||||||||||  |||    |||||||||||||||||||||||| |||||||||||||| | ||||| ||||||||    
T  35166377 ctaagttttgcacatgtggcggttttggccttcaatgtcaattttgactcggtctacgctgacatgacaccctaagtgaggtgccacatgttatt 35166471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 392 - 578
Target Start/End: Complemental strand, 30604399 - 30604217
Alignment:
Q  392 cttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccctaagaagaagnnnnnnnctataaaaccgtccactaagttttgcacttg 491  Q
    |||||||||| ||| |||| ||||| ||| |||||||||||||||| ||||||||||| ||        ||| ||||||| || ||||||||||||| ||    
T  30604399 cttaatagcagtttcagccacctaattttctcaaagttgcgattttagcccctaagaaaaa----attactacaaaaccgccccctaagttttgcacctg 30604304  T
Q  492 tggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttattttattttt 578  Q
    |||  ||||||  ||   || | ||||||||||| ||||||||||||||| ||||||||||| | ||||   ||||||||| |||||    
T  30604303 tggcagttttgcacctgtaggccaattttgactctgtctacgctgacgtggcaccctaagtgaggtgcccagtgttatttttttttt 30604217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 393 - 447
Target Start/End: Complemental strand, 40133190 - 40133136
Alignment:
Q  393 ttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccctaag 447  Q
    |||||||||||||||||||||||| |||  |||||||||||||||||||||||||    
T  40133190 ttaatagcaattttagccccctaactttcccaaagttgcgattttggcccctaag 40133136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 381 - 438
Target Start/End: Original strand, 24405481 - 24405538
Alignment:
Q  381 tttataataggcttaatagcaattttagccccctaaatttttcaaagttgcgattttg 438  Q
    ||||||||||| ||||||||| |||||| ||||||| |||||||||||||||||||||    
T  24405481 tttataataggtttaatagcagttttagtcccctaactttttcaaagttgcgattttg 24405538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 389 - 449
Target Start/End: Complemental strand, 36798491 - 36798430
Alignment:
Q  389 aggcttaatagcaattttagccccctaaatttttcaaagttgcgattttgg-cccctaagaa 449  Q
    ||||||||||||| |||||||||||||| ||| |||||||||||||||||| ||||||||||    
T  36798491 aggcttaatagcagttttagccccctaactttctcaaagttgcgattttggtcccctaagaa 36798430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 476 - 572
Target Start/End: Original strand, 9852868 - 9852964
Alignment:
Q  476 ctaagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttatttt 572  Q
    ||||||||||||  |||||  |||||||| |||||| | |||||||||| | |||||||||||||| ||||||||||| | |||||  |||||||||    
T  9852868 ctaagttttgcatctgtggcagttttggctcccaaggccaattttgacttgatctacgctgacgtggcaccctaagtgaggtgccacgtgttatttt 9852964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 388 - 443
Target Start/End: Original strand, 12406039 - 12406094
Alignment:
Q  388 taggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccc 443  Q
    |||||||||||||| |||||||||||||| |||  |||||||||||||||||||||    
T  12406039 taggcttaatagcagttttagccccctaactttcccaaagttgcgattttggcccc 12406094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 465 - 572
Target Start/End: Original strand, 16132815 - 16132922
Alignment:
Q  465 aaaaccgtccactaagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatat 564  Q
    ||||||| || ||||||||||||| | |||  ||||||| ||||||| | ||||||||||  ||||||||||| ||| || |||||||| | |||||| |    
T  16132815 aaaaccgccccctaagttttgcacctatggcagttttggtccccaaggccaattttgactttgtctacgctgatgtggcatcctaagtgaggtgccatgt 16132914  T
Q  565 gttatttt 572  Q
    ||||||||    
T  16132915 gttatttt 16132922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 465 - 547
Target Start/End: Complemental strand, 19131743 - 19131661
Alignment:
Q  465 aaaaccgtccactaagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccc 547  Q
    ||||||| || ||||||||||||  ||||   ||||||||||| ||| | ||||||||||||||||||||||||||| |||||    
T  19131743 aaaaccgccccctaagttttgcatctgtgacagttttggccccgaaggccaattttgactcggtctacgctgacgtggcaccc 19131661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 391 - 553
Target Start/End: Complemental strand, 43098337 - 43098182
Alignment:
Q  391 gcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccc-taagaagaagnnnnnnnctataaaaccgtccactaagttttgcact 489  Q
    ||||||||||| |||||| ||||||| |||||||||||| ||||||| ||||| ||| || ||        ||| |||||||  | |||||||||||||     
T  43098337 gcttaatagcagttttagtcccctaactttttcaaagttacgatttttgccccctaaaaaaaa-------actacaaaaccgcgc-ctaagttttgcacc 43098246  T
Q  490 tgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    ||| |  |||||||||||| | |  ||||||||||| ||||||||||||||| |||||||||||    
T  43098245 tgtagcagttttggcccccgatatcaattttgactcagtctacgctgacgtggcaccctaagtg 43098182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 515 - 572
Target Start/End: Complemental strand, 6130451 - 6130394
Alignment:
Q  515 aattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttatttt 572  Q
    ||||||||||||||||| | ||||||||||||||||||| | ||||| ||||||||||    
T  6130451 aattttgactcggtctatgttgacgtgacaccctaagtgaggtgccacatgttatttt 6130394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 476 - 553
Target Start/End: Original strand, 18403068 - 18403145
Alignment:
Q  476 ctaagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    ||||||||||||  | |||  |||||| |||||||||| ||||||||||| ||||||| ||||||| |||||||||||    
T  18403068 ctaagttttgcatctctggcagttttgacccccaagaccaattttgactcagtctacgttgacgtggcaccctaagtg 18403145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 390 - 443
Target Start/End: Original strand, 21066375 - 21066428
Alignment:
Q  390 ggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccc 443  Q
    ||||||||| ||||||||||||||||| |||| ||||||| |||||||||||||    
T  21066375 ggcttaataacaattttagccccctaacttttccaaagtttcgattttggcccc 21066428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 391 - 553
Target Start/End: Original strand, 24779276 - 24779432
Alignment:
Q  391 gcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccctaagaagaagnnnnnnnctataaaaccgtccactaagttttgcactt 490  Q
    ||||||||| | |||||||| ||||| ||||| ||||||||||||||| || ||||||| ||        ||| |||||||||  |||||||||||   |    
T  24779276 gcttaatagtagttttagcctcctaacttttttaaagttgcgattttgtccactaagaaaaa-----aaactacaaaaccgtct-ctaagttttgcctct 24779369  T
Q  491 gtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtg 553  Q
     |||  |||||||  ||||| || ||||||||||||||||||||||||||| ||||| |||||    
T  24779370 atggcagttttggttcccaaaaccaattttgactcggtctacgctgacgtggcaccccaagtg 24779432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 476 - 572
Target Start/End: Complemental strand, 34320179 - 34320083
Alignment:
Q  476 ctaagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttatttt 572  Q
    ||||||||| || ||||||  ||||||||||||||    |||||||||| ||||||| |||||||| |||||| |||||| ||| | ||||||||||    
T  34320179 ctaagttttacatttgtggcagttttggcccccaaagtcaattttgacttggtctacactgacgtggcacccttagtggggtgctacatgttatttt 34320083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 497 - 545
Target Start/End: Complemental strand, 38163626 - 38163578
Alignment:
Q  497 gttttggcccccaagactaattttgactcggtctacgctgacgtgacac 545  Q
    |||||||||||| |||| ||||||||||||||| |||||||||||||||    
T  38163626 gttttggccccctagaccaattttgactcggtcaacgctgacgtgacac 38163578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 497 - 566
Target Start/End: Original strand, 39528869 - 39528938
Alignment:
Q  497 gttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgt 566  Q
    ||||||| |||| || ||| | ||||||||||| ||||||||||||||||||||||| | ||||| ||||    
T  39528869 gttttggacccccagtctattgttgactcggtcaacgctgacgtgacaccctaagtgaggtgccacatgt 39528938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 441
Target Start/End: Original strand, 8284158 - 8284206
Alignment:
Q  393 ttaatagcaattttagccccctaaatttttcaaagttgcgattttggcc 441  Q
    ||||||||||||||| |||| ||| |||| |||||||||||||||||||    
T  8284158 ttaatagcaattttaaccccataacttttccaaagttgcgattttggcc 8284206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 497 - 541
Target Start/End: Complemental strand, 22471848 - 22471804
Alignment:
Q  497 gttttggcccccaagactaattttgactcggtctacgctgacgtg 541  Q
    |||||||||||| |||| ||||||||||||||| |||||||||||    
T  22471848 gttttggccccctagaccaattttgactcggtcaacgctgacgtg 22471804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 497 - 545
Target Start/End: Original strand, 26364708 - 26364756
Alignment:
Q  497 gttttggcccccaagactaattttgactcggtctacgctgacgtgacac 545  Q
    |||||||||||| | || ||||||||||||||| |||||||||||||||    
T  26364708 gttttggccccctaaaccaattttgactcggtcaacgctgacgtgacac 26364756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 477 - 549
Target Start/End: Original strand, 28446087 - 28446159
Alignment:
Q  477 taagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacacccta 549  Q
    ||||||||||| |||||   | ||||||||| ||| | |||||||||||||| ||||||||| ||||||||||    
T  28446087 taagttttgcatttgtgacagctttggcccctaaggccaattttgactcggtatacgctgacctgacacccta 28446159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 497 - 545
Target Start/End: Complemental strand, 38974837 - 38974789
Alignment:
Q  497 gttttggcccccaagactaattttgactcggtctacgctgacgtgacac 545  Q
    |||||||||||| | | |||||||||||||||| |||||||||||||||    
T  38974837 gttttggccccctaaattaattttgactcggtcaacgctgacgtgacac 38974789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 390 - 438
Target Start/End: Original strand, 40132904 - 40132952
Alignment:
Q  390 ggcttaatagcaattttagccccctaaatttttcaaagttgcgattttg 438  Q
    |||||||||||| |||||| || |||| |||||||||||||||||||||    
T  40132904 ggcttaatagcagttttagtcctctaactttttcaaagttgcgattttg 40132952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 388 - 443
Target Start/End: Complemental strand, 2974950 - 2974895
Alignment:
Q  388 taggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccc 443  Q
    |||||||||||||| |||| ||||||||| |||  | |||||||||||||||||||    
T  2974950 taggcttaatagcagtttttgccccctaactttcacgaagttgcgattttggcccc 2974895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 390 - 449
Target Start/End: Complemental strand, 6131849 - 6131790
Alignment:
Q  390 ggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccctaagaa 449  Q
    |||||||||||| |||||||  ||||| |||   ||||||||||||||||||||||||||    
T  6131849 ggcttaatagcagttttagctacctaactttcctaaagttgcgattttggcccctaagaa 6131790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 499 - 546
Target Start/End: Original strand, 20039998 - 20040045
Alignment:
Q  499 tttggcccccaagactaattttgactcggtctacgctgacgtgacacc 546  Q
    ||||||||||||| | |||||||||| ||||| |||||||||||||||    
T  20039998 tttggcccccaaggccaattttgacttggtcttcgctgacgtgacacc 20040045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 519 - 566
Target Start/End: Complemental strand, 35678272 - 35678225
Alignment:
Q  519 ttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgt 566  Q
    ||||||||||| ||||||||||||||||||||||| | ||||| ||||    
T  35678272 ttgactcggtcaacgctgacgtgacaccctaagtgaggtgccacatgt 35678225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 519 - 553
Target Start/End: Original strand, 4096576 - 4096610
Alignment:
Q  519 ttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    ||||||||||| |||||||||||||||||||||||    
T  4096576 ttgactcggtcaacgctgacgtgacaccctaagtg 4096610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 519 - 561
Target Start/End: Original strand, 8986735 - 8986777
Alignment:
Q  519 ttgactcggtctacgctgacgtgacaccctaagtgggatgcca 561  Q
    ||||||||||| ||||||||||| ||||||||||| |||||||    
T  8986735 ttgactcggtcaacgctgacgtggcaccctaagtgagatgcca 8986777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 519 - 553
Target Start/End: Complemental strand, 10029260 - 10029226
Alignment:
Q  519 ttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    ||||||||||| |||||||||||||||||||||||    
T  10029260 ttgactcggtcaacgctgacgtgacaccctaagtg 10029226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 384 - 446
Target Start/End: Original strand, 12610238 - 12610300
Alignment:
Q  384 ataataggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccctaa 446  Q
    |||| ||||||||| ||| |||| ||||||||  ||||| ||||||||||||||| |||||||    
T  12610238 ataaaaggcttaattgcacttttggccccctatctttttaaaagttgcgattttgtcccctaa 12610300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 393 - 443
Target Start/End: Original strand, 19340767 - 19340817
Alignment:
Q  393 ttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccc 443  Q
    ||||||||| |||||||||||||| |||| |||| ||||||||||| ||||    
T  19340767 ttaatagcagttttagccccctaacttttccaaaattgcgattttgacccc 19340817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 476 - 578
Target Start/End: Complemental strand, 19340996 - 19340894
Alignment:
Q  476 ctaagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttattttatt 575  Q
    ||||||||||||  |||||  ||||| | ||||||  | ||||||||||||||| ||| ||||||| |||||||| || | |||||  ||||||||| ||    
T  19340996 ctaagttttgcatctgtggcagttttagtccccaaagccaattttgactcggtcaacgttgacgtggcaccctaaatgaggtgccacgtgttattttttt 19340897  T
Q  576 ttt 578  Q
    |||    
T  19340896 ttt 19340894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 519 - 553
Target Start/End: Complemental strand, 35306890 - 35306856
Alignment:
Q  519 ttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    ||||||||||| |||||||||||||||||||||||    
T  35306890 ttgactcggtcaacgctgacgtgacaccctaagtg 35306856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 497 - 553
Target Start/End: Complemental strand, 223104 - 223048
Alignment:
Q  497 gttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    ||||||| ||||||| | | | ||||||||||| ||||||| |||||||||||||||    
T  223104 gttttggaccccaagtccattgttgactcggtcaacgctgatgtgacaccctaagtg 223048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 497 - 541
Target Start/End: Original strand, 4887554 - 4887598
Alignment:
Q  497 gttttggcccccaagactaattttgactcggtctacgctgacgtg 541  Q
    |||||||||||| |||| |||||| |||||||| |||||||||||    
T  4887554 gttttggccccctagaccaattttaactcggtcaacgctgacgtg 4887598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 389 - 449
Target Start/End: Complemental strand, 20512514 - 20512454
Alignment:
Q  389 aggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccctaagaa 449  Q
    ||||||||||||| |||| ||| | ||| |||  | |||||||||||||||||||||||||    
T  20512514 aggcttaatagcagttttcgcctcttaactttcacgaagttgcgattttggcccctaagaa 20512454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 497 - 553
Target Start/End: Original strand, 28736543 - 28736599
Alignment:
Q  497 gttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    ||||||| |||| || | ||| ||||||||||| ||||||||||| |||||||||||    
T  28736543 gttttggacccccagtccaatgttgactcggtcaacgctgacgtggcaccctaagtg 28736599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 497 - 537
Target Start/End: Original strand, 37887775 - 37887815
Alignment:
Q  497 gttttggcccccaagactaattttgactcggtctacgctga 537  Q
    ||||||||||||||||| |||||||||| ||||| ||||||    
T  37887775 gttttggcccccaagaccaattttgacttggtcttcgctga 37887815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 84; Significance: 1e-39; HSPs: 65)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 389 - 572
Target Start/End: Original strand, 3377500 - 3377679
Alignment:
Q  389 aggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccc-taagaagaagnnnnnnnctataaaaccgtccactaagttttgca 487  Q
    ||||||||||||| |||||||||||||| |||| ||||||||||||||||||||| |||||| ||        ||| ||||||| || ||||||||||||    
T  3377500 aggcttaatagcagttttagccccctaacttttccaaagttgcgattttggccccctaagaaaaa-----aaactacaaaaccgccccctaagttttgca 3377594  T
Q  488 cttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttatttt 572  Q
     ||||||  ||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||| | || |||||||||||||    
T  3377595 tttgtggcagttttggcccccaaggccaattttgactcggtctacgctgacgtgacgccctaagtgaggtgtcatatgttatttt 3377679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 477 - 572
Target Start/End: Original strand, 23220649 - 23220744
Alignment:
Q  477 taagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttatttt 572  Q
    |||||||||||| ||||| |||||||||||||||||| |||||||| |||||||||||||||||| ||||||||||| | ||||| ||||| ||||    
T  23220649 taagttttgcacatgtggcggttttggcccccaagaccaattttgattcggtctacgctgacgtggcaccctaagtgaggtgccacatgttttttt 23220744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 389 - 577
Target Start/End: Original strand, 17760681 - 17760867
Alignment:
Q  389 aggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccc-taagaagaagnnnnnnnctataaaaccgtccactaagttttgca 487  Q
    |||||||||||||  ||||||||||||| ||  |||||||||||||||||||||| |||||| ||        ||| ||||||  || ||||||||||||    
T  17760681 aggcttaatagcagctttagccccctaacttcctcaaagttgcgattttggccccctaagaaaaa---aaaaactacaaaaccaccccctaagttttgca 17760777  T
Q  488 cttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttattttatttt 577  Q
      |||||  ||||||||| ||||||  |||||||||||||||||| |||||||| |||||||| || | |||||  ||||||||||||||    
T  17760778 tatgtggcagttttggccaccaagatcaattttgactcggtctacactgacgtggcaccctaaatgaggtgccacgtgttattttatttt 17760867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 393 - 572
Target Start/End: Complemental strand, 12961155 - 12960981
Alignment:
Q  393 ttaatagcaattttagccccctaaatttttcaaagttgcgattttggcc-cctaagaagaagnnnnnnnctataaaaccgtccactaagttttgcacttg 491  Q
    ||||||||| |||||||| ||||| ||||||||||||||||||||||   |||||||| ||        ||| ||||  |||| |||| |||||||  ||    
T  12961155 ttaatagcagttttagcctcctaattttttcaaagttgcgattttggtttcctaagaaaaa------aactacaaaattgtcccctaaattttgcaactg 12961062  T
Q  492 tggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttatttt 572  Q
    |||  |||||||| || ||| | ||||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||    
T  12961061 tggcagttttggctccaaaggccaattttgactcggtctacgctgacgtgacaccctaagtgagatgccacatgttctttt 12960981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 390 - 572
Target Start/End: Original strand, 14978797 - 14978974
Alignment:
Q  390 ggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccctaagaagaagnnnnnnnctataaaaccgtccactaagttttgcact 489  Q
    |||||||||||| |||||||||||||| |||| |||||||||||||||||  |||   || ||        ||| ||||| | || |||||||||||||     
T  14978797 ggcttaatagcagttttagccccctaacttttccaaagttgcgattttgggtccttcaaaaaa-----aaactacaaaactgccccctaagttttgcacc 14978891  T
Q  490 tgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttatttt 572  Q
    |||||| ||||||||||| ||| | |||||||| | |||||||||||| ||| ||||||||||| | ||||| ||||||||||    
T  14978892 tgtggtagttttggccccaaaggccaattttgaattggtctacgctgatgtggcaccctaagtgaggtgccacatgttatttt 14978974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 394 - 545
Target Start/End: Original strand, 6320562 - 6320714
Alignment:
Q  394 taatagcaattttagccccctaaatttttcaaagttgcgattttggcccct-aagaagaagnnnnnnnctataaaaccgtccactaagttttgcacttgt 492  Q
    |||| ||| ||||||||| |||| ||||  ||||||||||||||||||||| |||||||||        || |||||||||| |||| |||||||  |||    
T  6320562 taattgcagttttagccctctaacttttctaaagttgcgattttggccccttaagaagaagaaaaaaaatacaaaaccgtcccctaaattttgcatctgt 6320661  T
Q  493 ggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacac 545  Q
    ||| |||||| ||||  |||| ||||| |||||||||||||||||||||||||    
T  6320662 ggtagttttgaccccttagaccaatttcgactcggtctacgctgacgtgacac 6320714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 465 - 572
Target Start/End: Original strand, 7579735 - 7579842
Alignment:
Q  465 aaaaccgtccactaagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatat 564  Q
    ||||||| || |||||||||||||||||||   |||| ||||||||  |||||||||||||||||||||||||| || ||||||||||| | ||||| ||    
T  7579735 aaaaccgcccgctaagttttgcacttgtggcaatttttgcccccaaagctaattttgactcggtctacgctgacatggcaccctaagtgaggtgccacat 7579834  T
Q  565 gttatttt 572  Q
    ||| ||||    
T  7579835 gttttttt 7579842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 396 - 571
Target Start/End: Complemental strand, 25085698 - 25085530
Alignment:
Q  396 atagcaattttagccccctaaatttttcaaagttgcgattttggcccctaagaagaagnnnnnnnctataaaaccgtccactaagttttgcacttgtggt 495  Q
    ||||||||||||||||||||| |||| |||||||| |||||||||||||||||| ||        ||| ||| |||  | | |||||||| || |||||     
T  25085698 atagcaattttagccccctaacttttccaaagttgtgattttggcccctaagaaaaa-------actacaaatccgcaccccaagttttgtacctgtggc 25085606  T
Q  496 ggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttattt 571  Q
     |||||||||| |||||  ||||||||| |||||||| |||||||| ||||||||||| | |||||  ||||||||    
T  25085605 agttttggccctcaagatcaattttgacccggtctacactgacgtggcaccctaagtgaggtgccacgtgttattt 25085530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 392 - 546
Target Start/End: Complemental strand, 23891942 - 23891797
Alignment:
Q  392 cttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccctaagaagaagnnnnnnnctataaaaccgtccactaagttttgcacttg 491  Q
    |||||||||| |||||| ||||||| ||||||||| || |||||||| ||||||| || ||        ||| ||||||||||| ||| ||| |||  ||    
T  23891942 cttaatagcagttttagtcccctaactttttcaaaattacgattttgacccctaaaaaaaa--------ctacaaaaccgtcca-taactttcgcatatg 23891852  T
Q  492 tggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacacc 546  Q
    |||  |||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  23891851 tggcagttttggctcccaagaccaattttgactcggtctacgctgacgtgacacc 23891797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 391 - 553
Target Start/End: Complemental strand, 16874816 - 16874658
Alignment:
Q  391 gcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccct--aagaagaagnnnnnnnctataaaaccgtccactaagttttgcac 488  Q
    ||||||||||| ||||| |||||||| ||| |||||||||| ||||||| ||||  ||||| ||        ||| ||||||| ||  |||||||||||     
T  16874816 gcttaatagcagttttaaccccctaactttctcaaagttgcaattttggaccctctaagaaaaa------aactacaaaaccgccccataagttttgcat 16874723  T
Q  489 ttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtg 553  Q
     |||||  |||||||| |||||| | ||||||||||||||||||||||||||| |||||||||||    
T  16874722 ctgtggcagttttggctcccaaggccaattttgactcggtctacgctgacgtggcaccctaagtg 16874658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 466 - 570
Target Start/End: Complemental strand, 50226633 - 50226529
Alignment:
Q  466 aaaccgtccactaagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatg 565  Q
    |||||| || ||||||||||||| ||| |  ||||||||||| ||| ||||| ||||||||||||||||||||||| ||||||||||| | |||||  ||    
T  50226633 aaaccgccctctaagttttgcacctgtagcagttttggccccgaaggctaatattgactcggtctacgctgacgtggcaccctaagtgaggtgccacgtg 50226534  T
Q  566 ttatt 570  Q
    |||||    
T  50226533 ttatt 50226529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 389 - 572
Target Start/End: Complemental strand, 30849544 - 30849366
Alignment:
Q  389 aggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccctaagaagaagnnnnnnnctataaaaccgtccactaagttttgcac 488  Q
    ||||||||||||| |||||| | ||||| ||||| |||||||||||||||| |  ||| || ||        ||| |||||||||| ||||||||||||     
T  30849544 aggcttaatagcagttttagtctcctaatttttttaaagttgcgattttggactttaataaaaa-----aaactacaaaaccgtcccctaagttttgcat 30849450  T
Q  489 ttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttatttt 572  Q
     |||| | |||||||||| |||| | |||||| ||| |||||| |||||||| |||||||||||| | |||||  |||||||||    
T  30849449 ctgtgatagttttggcccacaaggccaattttaacttggtctatgctgacgtaacaccctaagtgaggtgccacgtgttatttt 30849366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 465 - 550
Target Start/End: Complemental strand, 8301588 - 8301503
Alignment:
Q  465 aaaaccgtccactaagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaa 550  Q
    |||||||||| |||| |||||||  |||||  |||||| |||||||||| |||||||||||  |||||||||||||||||||||||    
T  8301588 aaaaccgtcccctaaattttgcatctgtggcagttttgacccccaagaccaattttgactcaatctacgctgacgtgacaccctaa 8301503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 476 - 553
Target Start/End: Complemental strand, 41997873 - 41997796
Alignment:
Q  476 ctaagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    ||||| ||||||  |||||  ||||||||| ||||| | |||||||||||||||||||||||||||||||||||||||    
T  41997873 ctaagctttgcatctgtggcagttttggcctccaaggccaattttgactcggtctacgctgacgtgacaccctaagtg 41997796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 393 - 578
Target Start/End: Original strand, 46572830 - 46573008
Alignment:
Q  393 ttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccctaagaagaagnnnnnnnctataaaaccgtccactaagttttgcacttgt 492  Q
    ||||||||| |||||||| ||||| |||  |||| |||| ||||||||||||||||| ||        ||| |||||||||| |||||||||||| ||||    
T  46572830 ttaatagcagttttagcctcctaattttcccaaaattgcaattttggcccctaagaaaaa-----aaactacaaaaccgtcccctaagttttgcatttgt 46572924  T
Q  493 ggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttattttattttt 578  Q
    ||  |||| |  ||||||| | |||||||||| |||||||||||| |||| |||||||||| | |||||  ||||| ||| |||||    
T  46572925 ggcagtttgg--ccccaaggccaattttgacttggtctacgctgatgtgagaccctaagtgaggtgccacgtgttaattttttttt 46573008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 465 - 553
Target Start/End: Complemental strand, 39642451 - 39642363
Alignment:
Q  465 aaaaccgtccactaagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    ||||||| || |||||||||||| ||||||  ||||||||||||||  | ||||||||||||||||| ||||||| | |||||||||||    
T  39642451 aaaaccgccccctaagttttgcatttgtggcagttttggcccccaaagccaattttgactcggtctatgctgacgcggcaccctaagtg 39642363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 465 - 553
Target Start/End: Original strand, 44672383 - 44672471
Alignment:
Q  465 aaaaccgtccactaagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    ||||||| || ||||||||||||  |||||  |||||||| |||||||  |||||||| |||||||||||||||||| |||||||||||    
T  44672383 aaaaccgccccctaagttttgcatatgtggcagttttggcgcccaagatcaattttgattcggtctacgctgacgtggcaccctaagtg 44672471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 477 - 572
Target Start/End: Complemental strand, 46505401 - 46505306
Alignment:
Q  477 taagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttatttt 572  Q
    ||||||||||| ||| ||  ||| ||||||||||||| ||||||| |||||| |||| ||||||||||||||||||| | ||||| ||||| ||||    
T  46505401 taagttttgcatttgcggcagttctggcccccaagaccaattttggctcggtttacgttgacgtgacaccctaagtgaggtgccacatgttttttt 46505306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 387 - 553
Target Start/End: Complemental strand, 15659311 - 15659146
Alignment:
Q  387 ataggcttaatagcaattttagccccctaaatttttcaaagttgcgattttgg-cccctaagaagaagnnnnnnnctataaaaccgtccactaagttttg 485  Q
    ||||| ||||||||| |||||  ||||||| |||| |||||||| |||||||| |||||||||||||        ||| |||| || || | ||||||||    
T  15659311 ataggtttaatagcagttttaagcccctaacttttccaaagttgtgattttggtcccctaagaagaa--aaaaaactacaaaatcgcccccaaagttttg 15659214  T
Q  486 cacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    ||  ||||| | ||||||||| |||||| |||||||||||| |||||| | ||| |||||||||||||    
T  15659213 catatgtggcgattttggccctcaagaccaattttgactcgatctacgttaacgagacaccctaagtg 15659146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 389 - 443
Target Start/End: Original strand, 51250484 - 51250538
Alignment:
Q  389 aggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccc 443  Q
    |||||||||| || |||||||||||||| ||||||||||||||||||||||||||    
T  51250484 aggcttaataacagttttagccccctaactttttcaaagttgcgattttggcccc 51250538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 384 - 553
Target Start/End: Original strand, 17692721 - 17692884
Alignment:
Q  384 ataataggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccc-taagaagaagnnnnnnnctataaaaccgtccactaagtt 482  Q
    |||||||| ||||||||||||||| |||||||| ||| ||||||||| |||||| ||||| |||||| ||         || |||| || ||  ||||||    
T  17692721 ataataggtttaatagcaattttaaccccctaactttctcaaagttgtgattttagccccctaagaaaaaaaa------tacaaaatcgccccttaagtt 17692814  T
Q  483 ttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    ||||| |||||| ||||||   ||||||| | | ||||||||| |||||||||||||||||||||||||||    
T  17692815 ttgcatttgtggcggttttcatccccaaggcca-ttttgactcagtctacgctgacgtgacaccctaagtg 17692884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 403 - 552
Target Start/End: Complemental strand, 49426291 - 49426149
Alignment:
Q  403 ttttagccccctaaatttttcaaagttgcgattttggccc-ctaagaagaagnnnnnnnctataaaaccgtccactaagttttgcacttgtggtggtttt 501  Q
    |||||||||||||| |||| ||||||||||||||| |||| ||||||| ||        ||| ||||| || |  ||||||||||| ||||||  |||||    
T  49426291 ttttagccccctaacttttccaaagttgcgattttagccctctaagaaaaa-------actacaaaactgttccttaagttttgcatttgtggcagtttt 49426199  T
Q  502 ggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagt 552  Q
    |||||| | | | |||||||||| |||||||||||||||||||||||||||    
T  49426198 ggccccaatgcc-aattttgacttggtctacgctgacgtgacaccctaagt 49426149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 477 - 553
Target Start/End: Complemental strand, 6569738 - 6569662
Alignment:
Q  477 taagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    |||||||| || ||||||  |||||||||| |||||| |||||||| |||||||||||||||||| ||| |||||||    
T  6569738 taagttttacatttgtggcagttttggccctcaagaccaattttgattcggtctacgctgacgtggcactctaagtg 6569662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 478 - 577
Target Start/End: Complemental strand, 5287457 - 5287358
Alignment:
Q  478 aagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttattttatttt 577  Q
    ||||||||||  |||||  ||||||||||| |||   ||||||||||||||| ||||||||||| ||||||||||| | |||||  ||||||||| ||||    
T  5287457 aagttttgcatatgtggatgttttggccccgaaggtcaattttgactcggtccacgctgacgtggcaccctaagtgaggtgccaagtgttattttttttt 5287358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 461 - 572
Target Start/End: Original strand, 25486281 - 25486391
Alignment:
Q  461 ctataaaaccgtccactaagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgcc 560  Q
    |||||||| || || ||||||||||||  ||||| | |||||||||| |||   ||||||||||||||||||||||||||| |||||||| || | ||||    
T  25486281 ctataaaatcgccctctaagttttgcatctgtggcg-ttttggcccctaagttcaattttgactcggtctacgctgacgtggcaccctaaatgaggtgcc 25486379  T
Q  561 atatgttatttt 572  Q
    |  |||||||||    
T  25486380 acgtgttatttt 25486391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 387 - 441
Target Start/End: Original strand, 12960843 - 12960897
Alignment:
Q  387 ataggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcc 441  Q
    |||||||||||| || ||||||||| |||| ||||||||||||||||||||||||    
T  12960843 ataggcttaataacagttttagcccgctaactttttcaaagttgcgattttggcc 12960897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 476 - 550
Target Start/End: Original strand, 18632397 - 18632471
Alignment:
Q  476 ctaagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaa 550  Q
    |||||||||||| |||||   ||||||||||||| ||  |||||||||||| ||||||||||||| |||||||||    
T  18632397 ctaagttttgcatttgtgacagttttggcccccaggatcaattttgactcgatctacgctgacgtaacaccctaa 18632471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 389 - 443
Target Start/End: Original strand, 50226391 - 50226445
Alignment:
Q  389 aggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccc 443  Q
    |||||||||  || |||||||||||||| ||||||||||||||||||||||||||    
T  50226391 aggcttaattacagttttagccccctaactttttcaaagttgcgattttggcccc 50226445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 480 - 577
Target Start/End: Complemental strand, 16298285 - 16298188
Alignment:
Q  480 gttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttattttatttt 577  Q
    ||||||||  |||||  |||||||| ||||| |  |||||||||| |||||||||||||||||||| ||||||| | |||||  ||||||||| ||||    
T  16298285 gttttgcatctgtggcagttttggctcccaatatcaattttgacttggtctacgctgacgtgacactctaagtgaggtgccacgtgttattttttttt 16298188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 465 - 546
Target Start/End: Original strand, 50401442 - 50401522
Alignment:
Q  465 aaaaccgtccactaagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacacc 546  Q
    ||||||| || |||||||||||| |||||   ||||||||||| ||| | |||||||||||||||||| |||||||||||||    
T  50401442 aaaaccgccccctaagttttgcatttgtgacagttttggcccc-aaggccaattttgactcggtctactctgacgtgacacc 50401522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 476 - 575
Target Start/End: Complemental strand, 1853685 - 1853588
Alignment:
Q  476 ctaagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttattttatt 575  Q
    |||||||||||| |||||    |||||||||| ||||| ||||| |||| |||||||| |||||||||||||||||||||  ||||  ||||||||||||    
T  1853685 ctaagttttgcatttgtgacaattttggcccc-aagaccaattt-gacttggtctacgttgacgtgacaccctaagtggggagccacgtgttattttatt 1853588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 498 - 553
Target Start/End: Complemental strand, 7060849 - 7060794
Alignment:
Q  498 ttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    ||||||| |||||||  |||||||||||||||||| |||||||| |||||||||||    
T  7060849 ttttggcacccaagatcaattttgactcggtctacactgacgtggcaccctaagtg 7060794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 388 - 443
Target Start/End: Original strand, 41997638 - 41997693
Alignment:
Q  388 taggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccc 443  Q
    |||| |||||||||||||| ||||||||| |||  |||||||||||||||||||||    
T  41997638 taggtttaatagcaatttttgccccctaattttcacaaagttgcgattttggcccc 41997693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 509 - 578
Target Start/End: Complemental strand, 46880941 - 46880871
Alignment:
Q  509 aagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttatt-ttattttt 578  Q
    ||||| ||||| ||||||||||||||||||||| |||||||||||   |||||| ||||||| ||||||||    
T  46880941 aagaccaatttcgactcggtctacgctgacgtggcaccctaagtgatgtgccatgtgttattattattttt 46880871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 390 - 443
Target Start/End: Complemental strand, 3377825 - 3377772
Alignment:
Q  390 ggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccc 443  Q
    |||||||||||| |||||||||||||| |||  |||||||| ||||||||||||    
T  3377825 ggcttaatagcagttttagccccctaactttcccaaagttgtgattttggcccc 3377772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 497 - 546
Target Start/End: Original strand, 8009831 - 8009880
Alignment:
Q  497 gttttggcccccaagactaattttgactcggtctacgctgacgtgacacc 546  Q
    |||||| || ||||||| |||||||||||| |||||||||||||||||||    
T  8009831 gttttgaccaccaagaccaattttgactcgttctacgctgacgtgacacc 8009880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 388 - 449
Target Start/End: Original strand, 25085397 - 25085458
Alignment:
Q  388 taggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccctaagaa 449  Q
    |||||||||||||| |||| ||||||||| |||   ||||||||||||||| ||||||||||    
T  25085397 taggcttaatagcagttttcgccccctaactttcataaagttgcgattttgacccctaagaa 25085458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 388 - 452
Target Start/End: Complemental strand, 27864473 - 27864408
Alignment:
Q  388 taggcttaatagcaattttagccccctaaatttttcaaagttgcgattttgg-cccctaagaagaa 452  Q
    ||||||||| |||| ||||||| |||||| |||| ||||||||| ||||||| |||||||||||||    
T  27864473 taggcttaacagcagttttagctccctaacttttccaaagttgcaattttggccccctaagaagaa 27864408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 465 - 570
Target Start/End: Original strand, 44436828 - 44436932
Alignment:
Q  465 aaaaccgtccactaagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatat 564  Q
    ||||| |||| ||||||||||||||||||   |||||| ||||||||   |||||||||||| |||||||| ||||  ||||||||||| | |||||  |    
T  44436828 aaaactgtcccctaagttttgcacttgtgacagttttg-cccccaaggtcaattttgactcgatctacgcttacgtcgcaccctaagtgaggtgccacgt 44436926  T
Q  565 gttatt 570  Q
    ||||||    
T  44436927 gttatt 44436932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 388 - 553
Target Start/End: Original strand, 45738934 - 45739094
Alignment:
Q  388 taggcttaatagcaattttagccccctaaatttttcaaagttgcgattttg-gcccctaagaagaagnnnnnnnctataaaaccgtccactaagttttgc 486  Q
    |||||||||||||||||||| | |||||| ||| ||||||||| |||||||  |||||||| | ||        ||| ||||||| ||  ||||||||||    
T  45738934 taggcttaatagcaattttaactccctaactttctcaaagttgtgattttgaccccctaaggaaaa------aactacaaaaccgccccttaagttttgc 45739027  T
Q  487 acttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    |  | |||  ||||||||||||||    ||||||||||||||||| ||| ||||| |||||||||||    
T  45739028 atctatggcagttttggcccccaaagtcaattttgactcggtctatgctaacgtggcaccctaagtg 45739094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 465 - 553
Target Start/End: Original strand, 1096538 - 1096626
Alignment:
Q  465 aaaaccgtccactaagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    ||||||| || |||||||| |||  |||||  ||||||||||| | |   ||||||||||||||||||||||||||| || ||||||||    
T  1096538 aaaaccgccctctaagtttcgcatctgtggcagttttggcccctagggtcaattttgactcggtctacgctgacgtggcatcctaagtg 1096626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 391 - 443
Target Start/End: Complemental strand, 5287887 - 5287835
Alignment:
Q  391 gcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccc 443  Q
    ||||||||||| ||||| |||| ||| ||| ||||||||||||||||||||||    
T  5287887 gcttaatagcagttttaaccccttaactttctcaaagttgcgattttggcccc 5287835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 449
Target Start/End: Original strand, 16874511 - 16874567
Alignment:
Q  393 ttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccctaagaa 449  Q
    |||||||||||||| ||||||||| |||| | ||||||||||| || ||||||||||    
T  16874511 ttaatagcaattttcgccccctaacttttacgaagttgcgattatgacccctaagaa 16874567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 497 - 545
Target Start/End: Original strand, 51462343 - 51462391
Alignment:
Q  497 gttttggcccccaagactaattttgactcggtctacgctgacgtgacac 545  Q
    |||||| ||||| ||||||||||||||| |||| |||||||||||||||    
T  51462343 gttttgaccccctagactaattttgacttggtcaacgctgacgtgacac 51462391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 497 - 545
Target Start/End: Complemental strand, 51463019 - 51462971
Alignment:
Q  497 gttttggcccccaagactaattttgactcggtctacgctgacgtgacac 545  Q
    |||||| ||||| |||| ||||||||||||||| |||||||||||||||    
T  51463019 gttttgaccccctagaccaattttgactcggtcaacgctgacgtgacac 51462971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 519 - 578
Target Start/End: Original strand, 20017507 - 20017566
Alignment:
Q  519 ttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttattttattttt 578  Q
    ||||||||||| ||||||||||| ||||||||||| | |||||  ||| |||||||||||    
T  20017507 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgtaattttattttt 20017566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 519 - 553
Target Start/End: Complemental strand, 14926 - 14892
Alignment:
Q  519 ttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    ||||||||||| |||||||||||||||||||||||    
T  14926 ttgactcggtcaacgctgacgtgacaccctaagtg 14892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 478 - 552
Target Start/End: Complemental strand, 14190772 - 14190698
Alignment:
Q  478 aagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagt 552  Q
    ||||||||||  |||||  ||||||||| ||||  | ||||||||||||||||||||||| ||| ||| ||||||    
T  14190772 aagttttgcatctgtggcagttttggcctccaatgccaattttgactcggtctacgctgatgtggcactctaagt 14190698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 501 - 547
Target Start/End: Complemental strand, 23480121 - 23480075
Alignment:
Q  501 tggcccccaagactaattttgactcggtctacgctgacgtgacaccc 547  Q
    ||||||||||| | ||||||||||||||||||||||| ||| |||||    
T  23480121 tggcccccaaggccaattttgactcggtctacgctgatgtggcaccc 23480075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 476 - 578
Target Start/End: Complemental strand, 32295185 - 32295083
Alignment:
Q  476 ctaagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttattttatt 575  Q
    ||||||||| || |||||   ||||||||||||||  | |||||| ||||||||||| | |||||| |||||||| || | |||||  ||||||||| ||    
T  32295185 ctaagttttacatttgtgacagttttggcccccaaagccaattttaactcggtctacccggacgtggcaccctaaatgaggtgccacgtgttattttttt 32295086  T
Q  576 ttt 578  Q
    |||    
T  32295085 ttt 32295083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 519 - 561
Target Start/End: Complemental strand, 32341680 - 32341638
Alignment:
Q  519 ttgactcggtctacgctgacgtgacaccctaagtgggatgcca 561  Q
    ||||||||||| ||||||||||| ||||||||||| |||||||    
T  32341680 ttgactcggtcaacgctgacgtggcaccctaagtgagatgcca 32341638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 519 - 553
Target Start/End: Original strand, 33811550 - 33811584
Alignment:
Q  519 ttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    ||||||||||| |||||||||||||||||||||||    
T  33811550 ttgactcggtcaacgctgacgtgacaccctaagtg 33811584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 519 - 553
Target Start/End: Original strand, 34988215 - 34988249
Alignment:
Q  519 ttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    ||||||||||| |||||||||||||||||||||||    
T  34988215 ttgactcggtcaacgctgacgtgacaccctaagtg 34988249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 388 - 446
Target Start/End: Original strand, 35544743 - 35544801
Alignment:
Q  388 taggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccctaa 446  Q
    |||||||||| ||| |||||||||||||  ||||  ||||||||||||||||| |||||    
T  35544743 taggcttaatcgcacttttagccccctatcttttcaaaagttgcgattttggctcctaa 35544801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 497 - 547
Target Start/End: Complemental strand, 46039091 - 46039041
Alignment:
Q  497 gttttggcccccaagactaattttgactcggtctacgctgacgtgacaccc 547  Q
    ||||||||||||||||| | |||||||| ||||| ||||||| ||||||||    
T  46039091 gttttggcccccaagaccacttttgacttggtcttcgctgacatgacaccc 46039041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 392 - 441
Target Start/End: Complemental strand, 18632651 - 18632602
Alignment:
Q  392 cttaatagcaattttagccccctaaatttttcaaagttgcgattttggcc 441  Q
    |||||||||| |||| ||||||||| |||| | |||||||||||||||||    
T  18632651 cttaatagcagttttcgccccctaacttttacgaagttgcgattttggcc 18632602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 390 - 443
Target Start/End: Complemental strand, 32295267 - 32295214
Alignment:
Q  390 ggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccc 443  Q
    |||||||||| | ||||||||||  || ||||||||||||||||||||| ||||    
T  32295267 ggcttaataggagttttagcccctaaactttttcaaagttgcgattttgacccc 32295214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 442
Target Start/End: Original strand, 39642199 - 39642252
Alignment:
Q  389 aggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggccc 442  Q
    ||||||||||||| |||| ||||||||| |||  | ||||||||||||||||||    
T  39642199 aggcttaatagcagttttcgccccctaactttcacgaagttgcgattttggccc 39642252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 497 - 541
Target Start/End: Complemental strand, 4476152 - 4476108
Alignment:
Q  497 gttttggcccccaagactaattttgactcggtctacgctgacgtg 541  Q
    ||||| |||||| |||| ||||||||||||||| |||||||||||    
T  4476152 gttttagccccctagaccaattttgactcggtcaacgctgacgtg 4476108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 497 - 553
Target Start/End: Original strand, 16545663 - 16545719
Alignment:
Q  497 gttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    ||||| ||||||||   |||||||||||||||||| ||||||||  |||||||||||    
T  16545663 gtttttgcccccaatggtaattttgactcggtctatgctgacgtagcaccctaagtg 16545719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 497 - 545
Target Start/End: Complemental strand, 21259940 - 21259892
Alignment:
Q  497 gttttggcccccaagactaattttgactcggtctacgctgacgtgacac 545  Q
    ||||||||| || |||| ||||||| ||||||| |||||||||||||||    
T  21259940 gttttggcctcctagaccaattttgtctcggtcaacgctgacgtgacac 21259892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 497 - 553
Target Start/End: Original strand, 26861377 - 26861433
Alignment:
Q  497 gttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    ||||||| ||||||| | | | ||||||||||| ||||||||||| |||||||||||    
T  26861377 gttttggaccccaagtccattgttgactcggtcaacgctgacgtggcaccctaagtg 26861433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 381 - 441
Target Start/End: Complemental strand, 37696601 - 37696541
Alignment:
Q  381 tttataataggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcc 441  Q
    |||| |||||||||||| ||| |||| |||||||| |||||  |||||||| |||||||||    
T  37696601 tttaaaataggcttaatcgcacttttggccccctatattttcaaaagttgcaattttggcc 37696541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 390 - 442
Target Start/End: Complemental strand, 46039195 - 46039143
Alignment:
Q  390 ggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggccc 442  Q
    |||||||| ||| |||| ||||||||  ||||| |||||||||||||||||||    
T  46039195 ggcttaattgcacttttggccccctatctttttaaaagttgcgattttggccc 46039143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 497 - 541
Target Start/End: Complemental strand, 51549291 - 51549247
Alignment:
Q  497 gttttggcccccaagactaattttgactcggtctacgctgacgtg 541  Q
    |||||||||||| |||| ||||||||||||||| ||||| |||||    
T  51549291 gttttggccccctagaccaattttgactcggtcaacgctaacgtg 51549247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 81; Significance: 8e-38; HSPs: 52)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 388 - 577
Target Start/End: Complemental strand, 41487525 - 41487341
Alignment:
Q  388 taggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccctaagaagaagnnnnnnnctataaaaccgtccactaagttttgca 487  Q
    |||| ||||||||| ||||||||| |||| |||| ||||||||||||||| |||| |||||| ||        ||| ||||||| || ||||||||||||    
T  41487525 taggtttaatagcagttttagccctctaacttttccaaagttgcgattttagcccttaagaaaaa-----aaactacaaaaccgccccctaagttttgca 41487431  T
Q  488 cttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttattttatttt 577  Q
      ||| |  ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||    
T  41487430 actgtagctgttttggcccccaagaccaattttgactcggtctacgctgacgtgacacgctaagtgaggtgccatatgttattttatttt 41487341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 465 - 572
Target Start/End: Complemental strand, 3676371 - 3676264
Alignment:
Q  465 aaaaccgtccactaagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatat 564  Q
    ||||||| |||||||||||||||  |||||  ||||||| |||||| || ||||||||||||||||||||||||||| ||||||||||| | |||||| |    
T  3676371 aaaaccgcccactaagttttgcatctgtggcagttttggtccccaaaaccaattttgactcggtctacgctgacgtggcaccctaagtgaggtgccatgt 3676272  T
Q  565 gttatttt 572  Q
    ||||||||    
T  3676271 gttatttt 3676264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 390 - 572
Target Start/End: Original strand, 45177201 - 45177379
Alignment:
Q  390 ggcttaatagcaattttagccccctaaatttttcaaagttgcgattttgg-cccctaagaagaagnnnnnnnctataaaaccgtccactaagttttgcac 488  Q
    ||||||||||||  ||||||| ||||| ||| |||||||||||||||||  |||||||||| ||        ||| |||| ||||| ||||||||||||     
T  45177201 ggcttaatagcagatttagcctcctaactttctcaaagttgcgattttgatcccctaagaaaaa-----aaactacaaaatcgtcccctaagttttgcat 45177295  T
Q  489 ttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttatttt 572  Q
     ||||   |||||||||| |||| |||||||||||||||||||| |||||||| ||||||||||| | || || ||||||||||    
T  45177296 ctgtgacagttttggccctcaaggctaattttgactcggtctacactgacgtggcaccctaagtgaggtgtcacatgttatttt 45177379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 384 - 550
Target Start/End: Complemental strand, 29044865 - 29044705
Alignment:
Q  384 ataataggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccctaagaagaagnnnnnnnctataaaaccgtccactaagttt 483  Q
    |||| ||||||||||||| |||||||||||||| ||    |||||| ||||||||| ||||||||| ||        ||| ||||| ||||  |||||||    
T  29044865 ataaaaggcttaatagcagttttagccccctaacttccctaaagttacgattttggtccctaagaaaaa------acctacaaaactgtcccataagttt 29044772  T
Q  484 tgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaa 550  Q
    |||| ||||||  ||||||||||||||| | |||||||||||||||||||||||||||  |||||||    
T  29044771 tgcatttgtggcagttttggcccccaaggccaattttgactcggtctacgctgacgtggtaccctaa 29044705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 465 - 552
Target Start/End: Complemental strand, 37813334 - 37813247
Alignment:
Q  465 aaaaccgtccactaagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagt 552  Q
    ||||||| || ||||||||||||  |||||  ||||||||||||||| | ||||||||||||||||||||||||||| ||||||||||    
T  37813334 aaaaccgccccctaagttttgcatctgtggcagttttggcccccaaggccaattttgactcggtctacgctgacgtggcaccctaagt 37813247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 465 - 553
Target Start/End: Original strand, 21486725 - 21486813
Alignment:
Q  465 aaaaccgtccactaagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    ||||||| || ||||||||||||| |||||   |||||||| ||||||  |||||||||| ||||||||||||||||||||||||||||    
T  21486725 aaaaccgccccctaagttttgcacctgtggcatttttggcctccaagatcaattttgacttggtctacgctgacgtgacaccctaagtg 21486813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 388 - 578
Target Start/End: Complemental strand, 30539306 - 30539121
Alignment:
Q  388 taggcttaatagcaattttagccccctaaatttttcaaagttgcgattttgg-cccctaagaagaagnnnnnnnctataaaaccgtccactaagttttgc 486  Q
    |||||||||||||| |||||||||  ||| |||  ||||||||||||||||| |||||||||| ||        ||| |||||||||| |||||||||||    
T  30539306 taggcttaatagcagttttagccct-taactttcccaaagttgcgattttggtcccctaagaaaaa-----aaactacaaaaccgtcccctaagttttgc 30539213  T
Q  487 acttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttattttattttt 578  Q
    |  |||||  ||||||||||||||    |||||||| |||||||| ||||||||| ||||||||||| | |||||  |||| |||| |||||    
T  30539212 atctgtggcagttttggcccccaatgtcaattttgattcggtctatgctgacgtggcaccctaagtgaggtgccacgtgttttttttttttt 30539121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 499 - 564
Target Start/End: Complemental strand, 36688215 - 36688150
Alignment:
Q  499 tttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatat 564  Q
    ||||||||||||||| |||||||| | |||||||||||||||| ||||||||||| ||||||||||    
T  36688215 tttggcccccaagaccaattttgatttggtctacgctgacgtggcaccctaagtgagatgccatat 36688150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 393 - 547
Target Start/End: Original strand, 37939917 - 37940063
Alignment:
Q  393 ttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccctaagaagaagnnnnnnnctataaaaccgtccactaagttttgcacttgt 492  Q
    ||||||||| |||||||| | ||| ||||||||||||||||||||||||||| | || ||        ||| ||||||  || ||||||||||||  |||    
T  37939917 ttaatagcagttttagcctcttaattttttcaaagttgcgattttggccccttaaaaaaa-------actacaaaaccaccccctaagttttgcatatgt 37940009  T
Q  493 ggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccc 547  Q
    ||  ||||||| | ||||||| ||||||||||||||||||||||||||| |||||    
T  37940010 ggcagttttgg-caccaagaccaattttgactcggtctacgctgacgtggcaccc 37940063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 393 - 443
Target Start/End: Original strand, 25896993 - 25897043
Alignment:
Q  393 ttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccc 443  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  25896993 ttaatagcagttttagccccctaactttttcaaagttgcgattttggcccc 25897043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 392 - 553
Target Start/End: Original strand, 29657702 - 29657863
Alignment:
Q  392 cttaatagcaattttagccccctaaatttttcaaagttgcgattttggccc-ctaagaagaagnnnnnnnctataaaaccgtccactaagttttgcactt 490  Q
    |||||||| | ||||| | |||||| ||| ||||||||||||||||||||| ||||||||||        ||| ||||||| || |||| |||||||  |    
T  29657702 cttaataggagttttacctccctaactttatcaaagttgcgattttggccctctaagaagaa--aaaaaactacaaaaccgccccctaaattttgcatat 29657799  T
Q  491 gtggtggttttggcccccaagact-aattttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    ||||  |||||||||||| | | | |||||||| ||||||||| ||||||||||||||||||||    
T  29657800 gtggcagttttggccccccaaagtcaattttgattcggtctacactgacgtgacaccctaagtg 29657863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 497 - 553
Target Start/End: Original strand, 33298442 - 33298498
Alignment:
Q  497 gttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    |||||||| |||||| |||||||||| |||||||||||||||||| |||||||||||    
T  33298442 gttttggctcccaagtctaattttgattcggtctacgctgacgtggcaccctaagtg 33298498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 389 - 549
Target Start/End: Complemental strand, 44269432 - 44269278
Alignment:
Q  389 aggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccc-taagaagaagnnnnnnnctataaaaccgtccactaagttttgca 487  Q
    ||||||||||| ||||||| |||||||| ||| ||||||||||||||||| |||| |||||| ||        || |||||| | |   |||||||||||    
T  44269432 aggcttaatagtaattttaaccccctaattttctcaaagttgcgattttgaccccctaagaaaaa-------actttaaaactgccttttaagttttgca 44269340  T
Q  488 cttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacacccta 549  Q
     ||||||| ||||||||||||||  | ||||||||||||  ||||||||| ||| |||||||    
T  44269339 tttgtggtagttttggcccccaatgccaattttgactcgacctacgctgatgtggcacccta 44269278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 390 - 553
Target Start/End: Complemental strand, 6807480 - 6807324
Alignment:
Q  390 ggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggccc-ctaagaagaagnnnnnnnctataaaaccgtccactaagttttgcac 488  Q
    ||||||||||||||||||| ||||||| |||  ||||||||| |||||| ||| |||| || ||        ||| ||||||  || ||||||||||||     
T  6807480 ggcttaatagcaattttagtcccctaactttcccaaagttgcaattttgaccctctaaaaaaaa--------ctacaaaaccaccccctaagttttgcat 6807389  T
Q  489 ttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    ||||||  |||||| ||| ||||   ||||||||||| ||||||||||||||| |||||||||||    
T  6807388 ttgtggcagttttgtccctcaaggtcaattttgactctgtctacgctgacgtggcaccctaagtg 6807324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 389 - 572
Target Start/End: Complemental strand, 23702449 - 23702271
Alignment:
Q  389 aggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccc-taagaagaagnnnnnnnctataaaaccgtccactaagttttgca 487  Q
    ||||||||||||| |||||||||||||| |||   |||||||||||||| ||||| |||||| ||         || ||||  |||| ||||||||||||    
T  23702449 aggcttaatagcagttttagccccctaactttccaaaagttgcgattttagccccctaagaaaaaaat------tacaaaattgtcccctaagttttgca 23702356  T
Q  488 cttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttatttt 572  Q
     |||||   ||||||||| |||||   ||||||||||| ||||| |||||| || ||||||||||| |||||||  |||||||||    
T  23702355 tttgtgacagttttggcctccaaggtcaattttgactcagtctatgctgacatggcaccctaagtgagatgccacgtgttatttt 23702271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 388 - 538
Target Start/End: Complemental strand, 32071327 - 32071185
Alignment:
Q  388 taggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccctaagaagaagnnnnnnnctataaaaccgtccactaagttttgca 487  Q
    |||||||||||||| |||||||||| ||| ||||  ||||||||||||||| |||||||||| ||        ||| ||||||| || ||||||||||||    
T  32071327 taggcttaatagcagttttagcccc-taacttttctaaagttgcgattttgacccctaagaaaaa-------actacaaaaccgccccctaagttttgca 32071236  T
Q  488 cttgtggtggttttggcccccaagactaattttgactcggtctacgctgac 538  Q
      | ||   ||||||| | ||||||  ||||||||||||||||||||||||    
T  32071235 tatatgacagttttggtctccaagaacaattttgactcggtctacgctgac 32071185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 461 - 553
Target Start/End: Original strand, 14880402 - 14880494
Alignment:
Q  461 ctataaaaccgtccactaagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    ||||||||  |||| |||| |||||||  |||||  ||||||||||||||| |  |||||||||||||||| ||||||||| || ||||||||    
T  14880402 ctataaaattgtcccctaaattttgcatctgtggcagttttggcccccaaggccgattttgactcggtctatgctgacgtggcatcctaagtg 14880494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 497 - 545
Target Start/End: Original strand, 23936440 - 23936488
Alignment:
Q  497 gttttggcccccaagactaattttgactcggtctacgctgacgtgacac 545  Q
    |||||||||||| |||| ||||||||||||||| |||||||||||||||    
T  23936440 gttttggccccctagaccaattttgactcggtcaacgctgacgtgacac 23936488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 473 - 577
Target Start/End: Original strand, 25144021 - 25144125
Alignment:
Q  473 ccactaagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttatttt 572  Q
    |||||||||||||||  |||||  ||||||||  ||||  | |||||||||||||| |||||||||||  |||||||||||   ||||| ||||||||||    
T  25144021 ccactaagttttgcatctgtggcagttttggcatccaaagccaattttgactcggtttacgctgacgttgcaccctaagtgatgtgccacatgttatttt 25144120  T
Q  573 atttt 577  Q
     ||||    
T  25144121 ttttt 25144125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 387 - 443
Target Start/End: Complemental strand, 28349624 - 28349568
Alignment:
Q  387 ataggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccc 443  Q
    ||||||||||||| | |||||||||||||| |||  |||||||||||||||||||||    
T  28349624 ataggcttaatagtagttttagccccctaactttcccaaagttgcgattttggcccc 28349568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 498 - 553
Target Start/End: Original strand, 25897073 - 25897127
Alignment:
Q  498 ttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    |||||||||||||||| ||||||||||| ||||||||||||||| || ||||||||    
T  25897073 ttttggcccccaagaccaattttgactc-gtctacgctgacgtggcatcctaagtg 25897127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 390 - 444
Target Start/End: Complemental strand, 9762513 - 9762459
Alignment:
Q  390 ggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccct 444  Q
    ||||||||||||||||| ||| ||||| |||| | ||||||||||||||||||||    
T  9762513 ggcttaatagcaattttcgccacctaacttttacgaagttgcgattttggcccct 9762459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 438
Target Start/End: Original strand, 45515931 - 45515981
Alignment:
Q  388 taggcttaatagcaattttagccccctaaatttttcaaagttgcgattttg 438  Q
    |||||||||| ||| |||||||||| ||| |||||||||||||||||||||    
T  45515931 taggcttaattgcagttttagccccttaattttttcaaagttgcgattttg 45515981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 477 - 562
Target Start/End: Complemental strand, 521675 - 521590
Alignment:
Q  477 taagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccat 562  Q
    |||||||||||||||| |   |||||||| ||||| |  |||||||||||| ||||||||||||| ||| |||| || ||||||||    
T  521675 taagttttgcacttgtagcaattttggcctccaaggccgattttgactcggactacgctgacgtggcacgctaaatgagatgccat 521590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 476 - 549
Target Start/End: Original strand, 29790839 - 29790912
Alignment:
Q  476 ctaagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacacccta 549  Q
    ||||||||||||| |||||  ||||||| |||| ||   |||||||||| |||||||||||||||| |||||||    
T  29790839 ctaagttttgcacatgtggcagttttggtccccgaggtcaattttgacttggtctacgctgacgtggcacccta 29790912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 390 - 443
Target Start/End: Complemental strand, 36688311 - 36688258
Alignment:
Q  390 ggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccc 443  Q
    |||||||||||| ||||| |||||||| ||||||||||||| ||||||| ||||    
T  36688311 ggcttaatagcagttttaaccccctaactttttcaaagttgtgattttgacccc 36688258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 390 - 446
Target Start/End: Original strand, 9878359 - 9878415
Alignment:
Q  390 ggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccctaa 446  Q
    |||||||| ||| |||| |||||||| |||||  |||||||||||||||||||||||    
T  9878359 ggcttaattgcatttttggccccctatattttcaaaagttgcgattttggcccctaa 9878415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 497 - 541
Target Start/End: Original strand, 12278938 - 12278982
Alignment:
Q  497 gttttggcccccaagactaattttgactcggtctacgctgacgtg 541  Q
    |||||||||||| |||| ||||||||||||||| |||||||||||    
T  12278938 gttttggccccctagaccaattttgactcggtcaacgctgacgtg 12278982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 519 - 566
Target Start/End: Complemental strand, 5734373 - 5734326
Alignment:
Q  519 ttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgt 566  Q
    ||||||||||| ||||||||||||||||||||||| | ||||| ||||    
T  5734373 ttgactcggtcaacgctgacgtgacaccctaagtgaggtgccacatgt 5734326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 391 - 449
Target Start/End: Original strand, 15181640 - 15181699
Alignment:
Q  391 gcttaatagcaattttagccccctaaatttt-tcaaagttgcgattttggcccctaagaa 449  Q
    ||||||||||| |||||||||| ||| |||| ||||||||| ||||||| ||||||||||    
T  15181640 gcttaatagcagttttagccccataacttttctcaaagttgtgattttgccccctaagaa 15181699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 465 - 572
Target Start/End: Complemental strand, 16982853 - 16982747
Alignment:
Q  465 aaaaccgtccactaagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatat 564  Q
    ||||||| || ||||||||||||  ||||   |||||| |||||||| | ||||||||||  ||||||||||||||| ||||| ||||| | |||||  |    
T  16982853 aaaaccgccccctaagttttgcatctgtgccagttttg-cccccaaggccaattttgacttagtctacgctgacgtggcaccccaagtgaggtgccacgt 16982755  T
Q  565 gttatttt 572  Q
    ||||||||    
T  16982754 gttatttt 16982747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 388 - 443
Target Start/End: Original strand, 20853376 - 20853431
Alignment:
Q  388 taggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccc 443  Q
    |||||||||||||| |||||||||||||| ||| |  |||||||||||||| ||||    
T  20853376 taggcttaatagcagttttagccccctaactttcttgaagttgcgattttgacccc 20853431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 386 - 452
Target Start/End: Original strand, 23702119 - 23702186
Alignment:
Q  386 aataggcttaatagcaattttagccccctaaatttttcaaagttgcgattttgg-cccctaagaagaa 452  Q
    |||||||||||||||| |||| ||||| ||| |||  ||||||| ||||||||| |||||||||||||    
T  23702119 aataggcttaatagcagttttcgccccttaactttcacaaagttacgattttggtcccctaagaagaa 23702186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 519 - 553
Target Start/End: Complemental strand, 6655466 - 6655432
Alignment:
Q  519 ttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    ||||||||||| |||||||||||||||||||||||    
T  6655466 ttgactcggtcaacgctgacgtgacaccctaagtg 6655432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 519 - 553
Target Start/End: Complemental strand, 6735868 - 6735834
Alignment:
Q  519 ttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    ||||||||||| |||||||||||||||||||||||    
T  6735868 ttgactcggtcaacgctgacgtgacaccctaagtg 6735834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 519 - 553
Target Start/End: Complemental strand, 8287792 - 8287758
Alignment:
Q  519 ttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    ||||||||||| |||||||||||||||||||||||    
T  8287792 ttgactcggtcaacgctgacgtgacaccctaagtg 8287758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 476 - 578
Target Start/End: Original strand, 27545422 - 27545523
Alignment:
Q  476 ctaagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttattttatt 575  Q
    ||||||||||||  | |||  ||||||||||| ||| | |||||| ||||| |||||||||||||| ||||||||||| | |||||  |||| |||| ||    
T  27545422 ctaagttttgcatctatggcagttttggccccaaagcc-aattttaactcgatctacgctgacgtggcaccctaagtgaggtgccacgtgttgttttttt 27545520  T
Q  576 ttt 578  Q
    |||    
T  27545521 ttt 27545523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 388 - 446
Target Start/End: Original strand, 32498376 - 32498434
Alignment:
Q  388 taggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccctaa 446  Q
    |||||||||| ||| |||| ||||||||  ||||  |||||||||||||||||||||||    
T  32498376 taggcttaattgcacttttggccccctatcttttcaaaagttgcgattttggcccctaa 32498434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 515 - 577
Target Start/End: Complemental strand, 35213222 - 35213160
Alignment:
Q  515 aattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttattttatttt 577  Q
    ||||||||||||| ||||||||||||| |||| |||||| | |||||  ||||||||| ||||    
T  35213222 aattttgactcggcctacgctgacgtggcaccttaagtgaggtgccacgtgttattttttttt 35213160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 519 - 553
Target Start/End: Complemental strand, 37205729 - 37205695
Alignment:
Q  519 ttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    ||||||||||| |||||||||||||||||||||||    
T  37205729 ttgactcggtcaacgctgacgtgacaccctaagtg 37205695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 515 - 553
Target Start/End: Complemental strand, 39889966 - 39889928
Alignment:
Q  515 aattttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    |||||||||||||| |||||||||||||||| |||||||    
T  39889966 aattttgactcggtttacgctgacgtgacactctaagtg 39889928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 388 - 449
Target Start/End: Complemental strand, 41602927 - 41602865
Alignment:
Q  388 taggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcc-cctaagaa 449  Q
    |||||||||||||| |||||||||||||| |||   |||||||||||||| ||| ||||||||    
T  41602927 taggcttaatagcagttttagccccctaagtttcaaaaagttgcgattttagcctcctaagaa 41602865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 492 - 541
Target Start/End: Original strand, 5916504 - 5916553
Alignment:
Q  492 tggtggttttggcccccaagactaattttgactcggtctacgctgacgtg 541  Q
    |||| |||||||||||| | || ||||||||||||||| |||||||||||    
T  5916504 tggtcgttttggccccctaaaccaattttgactcggtcaacgctgacgtg 5916553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 476 - 553
Target Start/End: Original strand, 26823908 - 26823985
Alignment:
Q  476 ctaagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    |||||||||||| ||||||  ||||||| ||||||  | |||||||| ||  |||| | |||||||||||||||||||    
T  26823908 ctaagttttgcatttgtggcagttttgggccccaatgccaattttgattcaatctaggttgacgtgacaccctaagtg 26823985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 497 - 537
Target Start/End: Complemental strand, 8952773 - 8952733
Alignment:
Q  497 gttttggcccccaagactaattttgactcggtctacgctga 537  Q
    |||||||||||| |||| ||||||||||||||| |||||||    
T  8952773 gttttggccccctagaccaattttgactcggtcaacgctga 8952733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 465 - 553
Target Start/End: Complemental strand, 22192541 - 22192453
Alignment:
Q  465 aaaaccgtccactaagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    |||||||||  ||||||||||||  ||| |  ||||||||  |||||   ||||||||||||||||||||| | ||| |||||||||||    
T  22192541 aaaaccgtctcctaagttttgcaactgtagccgttttggctgccaaggtcaattttgactcggtctacgcttatgtggcaccctaagtg 22192453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 497 - 545
Target Start/End: Complemental strand, 27300728 - 27300680
Alignment:
Q  497 gttttggcccccaagactaattttgactcggtctacgctgacgtgacac 545  Q
    ||||||||||||||||| | ||||||||  |||| ||||||||||||||    
T  27300728 gttttggcccccaagaccacttttgacttagtcttcgctgacgtgacac 27300680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 388 - 436
Target Start/End: Original strand, 27545342 - 27545390
Alignment:
Q  388 taggcttaatagcaattttagccccctaaatttttcaaagttgcgattt 436  Q
    |||||||||||||| ||||||||  |||| |||| ||||||||||||||    
T  27545342 taggcttaatagcagttttagccgtctaacttttccaaagttgcgattt 27545390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 387 - 443
Target Start/End: Original strand, 31947851 - 31947907
Alignment:
Q  387 ataggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccc 443  Q
    ||||||||||| ||| |||| ||||||||  ||||  ||||||||||||||||||||    
T  31947851 ataggcttaattgcacttttggccccctatcttttcaaaagttgcgattttggcccc 31947907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 390 - 438
Target Start/End: Original strand, 32768326 - 32768374
Alignment:
Q  390 ggcttaatagcaattttagccccctaaatttttcaaagttgcgattttg 438  Q
    |||||||||||| ||||||||  |||||||| ||||| |||||||||||    
T  32768326 ggcttaatagcagttttagccatctaaatttctcaaatttgcgattttg 32768374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 514 - 546
Target Start/End: Complemental strand, 41567129 - 41567097
Alignment:
Q  514 taattttgactcggtctacgctgacgtgacacc 546  Q
    |||||||||||||||||| ||||||||||||||    
T  41567129 taattttgactcggtctatgctgacgtgacacc 41567097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 497 - 541
Target Start/End: Complemental strand, 45309532 - 45309488
Alignment:
Q  497 gttttggcccccaagactaattttgactcggtctacgctgacgtg 541  Q
    |||||||||||| |||| |||||||||| |||| |||||||||||    
T  45309532 gttttggccccctagaccaattttgacttggtcaacgctgacgtg 45309488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 74; Significance: 1e-33; HSPs: 69)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 388 - 553
Target Start/End: Complemental strand, 51315800 - 51315639
Alignment:
Q  388 taggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccc-taagaagaagnnnnnnnctataaaaccgtccactaagttttgc 486  Q
    |||||||||||||| |||||||||||||| |||  ||||||||||||||||||||| |||||| ||        ||| ||||||| || |||||||||||    
T  51315800 taggcttaatagcagttttagccccctaactttcccaaagttgcgattttggccccctaagaaaaa-----aaactacaaaaccgccccctaagttttgc 51315706  T
Q  487 acttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    || |||||  ||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||    
T  51315705 acctgtggcagttttggcccccaaggccaattttgactcggtctacgctgacgtggcaccctaagtg 51315639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 393 - 572
Target Start/End: Complemental strand, 33329933 - 33329753
Alignment:
Q  393 ttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccc-taagaagaagnnnnnnnctataaaaccgtccactaagttttgcacttg 491  Q
    ||||||||| ||||| ||||| || |||  ||| ||||||||||||||||| |||||||||        ||| |||||||||| |||||| ||||| |||    
T  33329933 ttaatagcagttttaaccccccaactttcccaacgttgcgattttggccccctaagaagaaaaaaaaaactacaaaaccgtcccctaagtattgcatttg 33329834  T
Q  492 tggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttatttt 572  Q
    |||  ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| | |||||  |||||||||    
T  33329833 tggcagttttggcccccaagaccaattttgactcggtctacgctgacgtggcaccctaagtgaggtgccacgtgttatttt 33329753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 382 - 551
Target Start/End: Complemental strand, 578733 - 578570
Alignment:
Q  382 ttataataggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccctaagaagaagnnnnnnnctataaaaccgtccactaagt 481  Q
    |||||||||| |||||| || |||||||| ||||| |||| ||||||||||||||||||||||||||| ||        ||| ||||||| || ||||||    
T  578733 ttataataggtttaatatcagttttagcctcctaacttttccaaagttgcgattttggcccctaagaaaaa-----aaactacaaaaccgccc-ctaagt 578640  T
Q  482 tttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaag 551  Q
    ||| ||| |||||| ||||||||||||||| | ||||||||||||||||| ||||||||| |||||||||    
T  578639 ttttcacctgtggtagttttggcccccaaggccaattttgactcggtctatgctgacgtggcaccctaag 578570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 393 - 572
Target Start/End: Complemental strand, 44586097 - 44585922
Alignment:
Q  393 ttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccc-taagaagaagnnnnnnnctataaaaccgtccactaagttttgcacttg 491  Q
    ||||||||| |||||||||||||| |||  ||||||||||||||||||||| |||||| ||        ||| ||||||| || |||||||||||   ||    
T  44586097 ttaatagcagttttagccccctaactttcccaaagttgcgattttggccccctaagaaaaa-----aaactacaaaaccgccccctaagttttgcttctg 44586003  T
Q  492 tggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttatttt 572  Q
    |||  ||||||||||||| | | ||||||||||||||||||||||||||| ||||||||||| | |||||| |||||||||    
T  44586002 tggcagttttggcccccacggccaattttgactcggtctacgctgacgtggcaccctaagtgaggtgccatgtgttatttt 44585922  T

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Target: chr3; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 386 - 572
Target Start/End: Complemental strand, 7218473 - 7218287
Alignment:
Q  386 aataggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggc-ccctaagaagaagnnnnnnnctataaaaccgtccactaagtttt 484  Q
    |||||| |||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||        ||| ||| |||||  |||||||||    
T  7218473 aataggtttaatagcaattttagccccctaatttttttaaagttgcgattttggctccctaagaagaa-aaaaaaactacaaagccgtctcctaagtttt 7218375  T
Q  485 gcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttatttt 572  Q
     ||  |||||  |||||||||||||||   |||||||||| | |||| |||||||||||||| |||||| | |||||  |||||||||    
T  7218374 acatctgtggcagttttggcccccaaggtcaattttgacttgatctatgctgacgtgacaccttaagtgaggtgccacgtgttatttt 7218287  T

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Target: chr3; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 388 - 572
Target Start/End: Original strand, 86573 - 86751
Alignment:
Q  388 taggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggccc-ctaagaagaagnnnnnnnctataaaaccgtccactaagttttgc 486  Q
    |||| |||||||||||||||||||||||| ||||| |||||||| ||||||| |  ||||||| ||        ||||||||| |  | |||||||||||    
T  86573 taggtttaatagcaattttagccccctaactttttaaaagttgctattttggtctactaagaaaaa-------actataaaactgcgccctaagttttgc 86665  T
Q  487 acttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttatttt 572  Q
    |||||| |  ||||||||||||||||| |||||||||||| ||||||||||| ||  |||||||||| | |||||  |||||||||    
T  86666 acttgtagcagttttggcccccaagaccaattttgactcgatctacgctgacatgggaccctaagtgaggtgccacgtgttatttt 86751  T

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Target: chr3; HSP #7
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 465 - 572
Target Start/End: Complemental strand, 44436641 - 44436534
Alignment:
Q  465 aaaaccgtccactaagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatat 564  Q
    ||||||| || ||||||||||||  |||||  ||||||||||||||| | ||||||||||||||||||||||||||| ||||||||||| | |||||  |    
T  44436641 aaaaccgccccctaagttttgcatctgtggcagttttggcccccaaggccaattttgactcggtctacgctgacgtggcaccctaagtgaggtgccacgt 44436542  T
Q  565 gttatttt 572  Q
    ||||||||    
T  44436541 gttatttt 44436534  T

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Target: chr3; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 391 - 572
Target Start/End: Complemental strand, 1814866 - 1814693
Alignment:
Q  391 gcttaatagcaattttagccccctaaatttttcaaagttgcgattttgg-cccctaagaagaagnnnnnnnctataaaaccgtccactaagttttgcact 489  Q
    ||||||||||| |||||||| ||||| |||| ||||||| ||||||||| |||||||||| ||        ||| |||||||||| ||||||||||||      
T  1814866 gcttaatagcagttttagcctcctaacttttccaaagtttcgattttggacccctaagaaaaa------aactacaaaaccgtcccctaagttttgca-- 1814775  T
Q  490 tgtggtggttttggccccc-aagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttatttt 572  Q
      |||  |||||||||||| ||||  ||||||||||||||||||||||||||| ||||||||||| | |||||  |||||||||    
T  1814774 --tggcagttttggccccctaagatcaattttgactcggtctacgctgacgtggcaccctaagtgaggtgccacgtgttatttt 1814693  T

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Target: chr3; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 389 - 577
Target Start/End: Original strand, 3916430 - 3916612
Alignment:
Q  389 aggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccctaagaagaagnnnnnnnctataaaaccgtccactaagttttgcac 488  Q
    ||||||||||||| ||||| |||| |||||||||  |||||| |||||||||||||||||| ||        ||| |||| ||  ||||||||||||||     
T  3916430 aggcttaatagcagttttaacccc-taaatttttttaagttgtgattttggcccctaagaaaaa-----aaactacaaaatcgctcactaagttttgcat 3916523  T
Q  489 ttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttattttatttt 577  Q
     |||||  ||||||||||||||    |||||||||||||||||| || ||||| ||||||||||| | |||||  ||||||||||||||    
T  3916524 ctgtggcagttttggcccccaaagtcaattttgactcggtctacactaacgtggcaccctaagtgaggtgccacgtgttattttatttt 3916612  T

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Target: chr3; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 465 - 572
Target Start/End: Complemental strand, 8025025 - 8024918
Alignment:
Q  465 aaaaccgtccactaagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatat 564  Q
    |||| ||||| ||||||||||||  |||||| ||||||||| ||||||| |||||| ||||||||||||||||||||||| ||||| || | | ||| ||    
T  8025025 aaaatcgtcccctaagttttgcatatgtggtagttttggcctccaagaccaattttaactcggtctacgctgacgtgacatcctaaatgaggtaccacat 8024926  T
Q  565 gttatttt 572  Q
    ||||||||    
T  8024925 gttatttt 8024918  T

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Target: chr3; HSP #11
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 386 - 546
Target Start/End: Complemental strand, 44433384 - 44433226
Alignment:
Q  386 aataggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcc--cctaagaagaagnnnnnnnctataaaaccgtccactaagttt 483  Q
    |||||||||||||||| |||||||||||||| |||| || ||||||||||| ||||  |||||||| ||        ||| ||||||| || ||||||||    
T  44433384 aataggcttaatagcagttttagccccctaacttttccacagttgcgatttcggcctccctaagaaaaa----aaaactacaaaaccgccccctaagttt 44433289  T
Q  484 tgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacacc 546  Q
    ||||  |||||  ||||||||||||||| | ||||||||| ||||||||||||| ||| ||||    
T  44433288 tgcatatgtggcagttttggcccccaaggccaattttgacccggtctacgctgatgtggcacc 44433226  T

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Target: chr3; HSP #12
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 477 - 577
Target Start/End: Complemental strand, 19404625 - 19404525
Alignment:
Q  477 taagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttattttattt 576  Q
    |||||||||||| ||||   ||||||||||||||| | ||||||||||  ||||||||| ||||||||||||||||| | |||||  |||||||||||||    
T  19404625 taagttttgcacatgtgacagttttggcccccaaggccaattttgacttagtctacgctaacgtgacaccctaagtgaggtgccacgtgttattttattt 19404526  T
Q  577 t 577  Q
    |    
T  19404525 t 19404525  T

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Target: chr3; HSP #13
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 389 - 529
Target Start/End: Original strand, 38957844 - 38957981
Alignment:
Q  389 aggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggccc-ctaagaagaagnnnnnnnctataaaaccgtccactaagttttgca 487  Q
    ||||||||||||| |||||||| ||||| ||||| |||||||||||||||||||  |||||| ||        ||| ||||||| || ||||||||||||    
T  38957844 aggcttaatagcagttttagcctcctaatttttttaaagttgcgattttggccctttaagaaaaa----aaaactacaaaaccgccccctaagttttgca 38957939  T
Q  488 cttgtggtggttttggcccccaagactaattttgactcggtc 529  Q
     ||||||  ||||||||||||||| | |||||||||||||||    
T  38957940 tttgtggcagttttggcccccaaggccaattttgactcggtc 38957981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 390 - 578
Target Start/End: Complemental strand, 54719309 - 54719127
Alignment:
Q  390 ggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcc-cctaagaagaagnnnnnnnctataaaaccgtccactaagttttgcac 488  Q
    |||||||| ||| ||||| |||||||| || ||||||||||||||||||||| |||||||| ||        ||| ||||||| || ||||||||||||     
T  54719309 ggcttaatggcagttttaaccccctaacttattcaaagttgcgattttggcctcctaagaaaaa-------actacaaaaccgccccctaagttttgcat 54719217  T
Q  489 ttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttattttattttt 578  Q
     |||    | ||||||||||||  | ||||||||||||||||||||||||||| ||||||||||| | |||||  |||| |||| |||||    
T  54719216 atgtaccaggtttggcccccaatgccaattttgactcggtctacgctgacgtggcaccctaagtgaggtgccaagtgtttttttcttttt 54719127  T

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Target: chr3; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 385 - 553
Target Start/End: Original strand, 1938312 - 1938475
Alignment:
Q  385 taataggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccctaagaagaagnnnnnnnctataaaaccgtccactaagtttt 484  Q
    ||||||| ||||||||| |||||| ||| ||| ||||  ||| |||||| ||||||||||| ||||||        ||| ||||||| ||  ||||||||    
T  1938312 taataggtttaatagcagttttagtcccttaacttttctaaaattgcgactttggcccctaggaagaa-----aacctacaaaaccgccccttaagtttt 1938406  T
Q  485 gcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    |||| |||||| |||||||||| |||    |||||||||||||||||||||||| || |||||||||||    
T  1938407 gcacctgtggtagttttggcccacaaagtcaattttgactcggtctacgctgacatggcaccctaagtg 1938475  T

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Target: chr3; HSP #16
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 465 - 570
Target Start/End: Complemental strand, 43747523 - 43747418
Alignment:
Q  465 aaaaccgtccactaagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatat 564  Q
    ||||||| || |||||||||||| || |||  ||||||||||||| ||  ||||||||||||||||||||||||||| || |||||||| | |||||  |    
T  43747523 aaaaccgccccctaagttttgcatttatggcagttttggcccccacgatcaattttgactcggtctacgctgacgtggcatcctaagtgaggtgccacgt 43747424  T
Q  565 gttatt 570  Q
    ||||||    
T  43747423 gttatt 43747418  T

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Target: chr3; HSP #17
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 498 - 553
Target Start/End: Original strand, 52008348 - 52008403
Alignment:
Q  498 ttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    |||||||||| || | ||||||||||||||||||||||||||||||||||||||||    
T  52008348 ttttggcccctaaaattaattttgactcggtctacgctgacgtgacaccctaagtg 52008403  T

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Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 461 - 546
Target Start/End: Original strand, 4474135 - 4474220
Alignment:
Q  461 ctataaaaccgtccactaagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacacc 546  Q
    |||||||||  ||| |||||||||||| ||||||  |||||| |||| ||||| |||||||| ||||||||||||||| |||||||    
T  4474135 ctataaaactttcctctaagttttgcatttgtggcagttttgacccctaagaccaattttgattcggtctacgctgacatgacacc 4474220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 388 - 541
Target Start/End: Original strand, 49787248 - 49787397
Alignment:
Q  388 taggcttaatagcaattttagccccctaaatttttcaaagttgcgattttgg-cccctaagaagaagnnnnnnnctataaaaccgtccactaagttttgc 486  Q
    |||||||||||||||||||||||| |||| |||| ||||||||| || |||| |||||||||| ||        |||||||||| |||   |||||||||    
T  49787248 taggcttaatagcaattttagccctctaacttttccaaagttgcaatcttggtcccctaagaaaaa-----aaactataaaaccatccctcaagttttgc 49787342  T
Q  487 acttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtg 541  Q
    |  |||||  ||||||||| ||||    |||||||||||||||||||||||||||    
T  49787343 atctgtggcagttttggcctccaaagtcaattttgactcggtctacgctgacgtg 49787397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 471 - 535
Target Start/End: Complemental strand, 14340971 - 14340907
Alignment:
Q  471 gtccactaagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgct 535  Q
    |||| |||||||||||| ||||||  ||||||||||||||  |||||||||||||||||||||||    
T  14340971 gtcccctaagttttgcatttgtggcagttttggcccccaacgctaattttgactcggtctacgct 14340907  T

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Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 515 - 578
Target Start/End: Complemental strand, 12759701 - 12759638
Alignment:
Q  515 aattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttattttattttt 578  Q
    |||||||||||| |||| ||||||||||||||||||||| | ||||| |||||||||| |||||    
T  12759701 aattttgactcgatctaggctgacgtgacaccctaagtgaggtgccacatgttatttttttttt 12759638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 391 - 553
Target Start/End: Complemental strand, 43586872 - 43586716
Alignment:
Q  391 gcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcc-cctaagaagaagnnnnnnnctataaaaccgtccactaagttttgcact 489  Q
    ||||||||| | |||||||| || || |||||||||||||||||||||||| |||||||| ||        ||| |||| ||||  ||| |||||||| |    
T  43586872 gcttaatagtagttttagcctcccaactttttcaaagttgcgattttggcctcctaagaaaaa-------actacaaaatcgtctcctatgttttgcatt 43586780  T
Q  490 tgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    ||||   ||| |||||||  | || |||||||||| |||||||||||||||| |||||||||||    
T  43586779 tgtgacagttatggcccctgataccaattttgacttggtctacgctgacgtggcaccctaagtg 43586716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 389 - 449
Target Start/End: Complemental strand, 25902668 - 25902607
Alignment:
Q  389 aggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggc-ccctaagaa 449  Q
    |||||||||| || |||||||||||||| ||| ||||||||||||||||||| |||||||||    
T  25902668 aggcttaatatcagttttagccccctaactttctcaaagttgcgattttggctccctaagaa 25902607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 498 - 567
Target Start/End: Original strand, 38177280 - 38177349
Alignment:
Q  498 ttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgtt 567  Q
    |||||||||||||| | |||||||||||||| | |||||||||| ||||||||||| | ||||| |||||    
T  38177280 ttttggcccccaaggccaattttgactcggtttgcgctgacgtggcaccctaagtgaggtgccacatgtt 38177349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 391 - 553
Target Start/End: Original strand, 54464163 - 54464321
Alignment:
Q  391 gcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccct-aagaagaagnnnnnnnctataaaaccgtccactaagttttgcact 489  Q
    ||||||||||| |||||| ||||||| ||||  |||||| ||||||||  |||| ||||| |||       ||| ||||| |||| ||||||||||||      
T  54464163 gcttaatagcagttttagtcccctaacttttctaaagttacgattttgatcccttaagaaaaagaa-----ctacaaaactgtcccctaagttttgcata 54464257  T
Q  490 tgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    |||||  |||||| ||||||||   ||||||||||||||||||||| ||||| |||| ||||||    
T  54464258 tgtggcagttttgacccccaaggtcaattttgactcggtctacgctcacgtggcaccttaagtg 54464321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 465 - 553
Target Start/End: Complemental strand, 14856799 - 14856711
Alignment:
Q  465 aaaaccgtccactaagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    |||||| ||| |||| |||||||| ||||   ||||||||||||||    |||||||| ||||||||||||||||||||||| ||||||    
T  14856799 aaaaccatcccctaaattttgcacatgtgccagttttggcccccaatgtcaattttgattcggtctacgctgacgtgacaccttaagtg 14856711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 497 - 553
Target Start/End: Complemental strand, 36567085 - 36567029
Alignment:
Q  497 gttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    ||||||||||||||| |  |||||||||||||| ||||||||||| |||||||||||    
T  36567085 gttttggcccccaaggccgattttgactcggtcaacgctgacgtggcaccctaagtg 36567029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 506 - 570
Target Start/End: Original strand, 44624735 - 44624799
Alignment:
Q  506 cccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttatt 570  Q
    |||||| | ||||||||||||||||||||||||||| ||||||||||| | || ||| |||||||    
T  44624735 cccaaggccaattttgactcggtctacgctgacgtggcaccctaagtgaggtgacatgtgttatt 44624799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 481 - 553
Target Start/End: Original strand, 53184596 - 53184667
Alignment:
Q  481 ttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    ||||||| ||||||  |||||| || |||| || |||||||||||||||||||||||| ||||||||||||||    
T  53184596 ttttgcatttgtggcagttttg-cctccaaaaccaattttgactcggtctacgctgacttgacaccctaagtg 53184667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 392 - 443
Target Start/End: Original strand, 22494555 - 22494606
Alignment:
Q  392 cttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccc 443  Q
    |||||||||||||||| ||||||||||||| ||||||| |||||||| ||||    
T  22494555 cttaatagcaattttaaccccctaaattttccaaagttacgattttgacccc 22494606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 476 - 551
Target Start/End: Original strand, 25843447 - 25843522
Alignment:
Q  476 ctaagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaag 551  Q
    ||||||||||||  |||||  ||||||| ||||||| | ||||||||| | ||||||||||||||| |||||||||    
T  25843447 ctaagttttgcatctgtggcagttttggtccccaaggccaattttgacccagtctacgctgacgtggcaccctaag 25843522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 403 - 449
Target Start/End: Original strand, 29512560 - 29512607
Alignment:
Q  403 ttttagccccctaaatttttcaaagttgcgattttgg-cccctaagaa 449  Q
    |||||||||||||| |||||||||||||||||||||| ||||||||||    
T  29512560 ttttagccccctaactttttcaaagttgcgattttggacccctaagaa 29512607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 462 - 553
Target Start/End: Original strand, 35359064 - 35359155
Alignment:
Q  462 tataaaaccgtccactaagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    ||||||| || || |||| |||||||| |||||  ||||||||||| ||    ||||||||||||||||||||||||||| |||| ||||||    
T  35359064 tataaaatcgccccctaatttttgcacatgtggcagttttggcccctaatgtcaattttgactcggtctacgctgacgtggcaccttaagtg 35359155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 461 - 535
Target Start/End: Original strand, 15976304 - 15976378
Alignment:
Q  461 ctataaaaccgtccactaagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgct 535  Q
    ||||||||| |||| |||||||||||||||||||  |||||||||  |||  | ||||||||||||| |||||||    
T  15976304 ctataaaactgtcccctaagttttgcacttgtggcagttttggccatcaaagccaattttgactcggcctacgct 15976378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 480 - 578
Target Start/End: Original strand, 46226783 - 46226881
Alignment:
Q  480 gttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttattttattttt 578  Q
    ||||||||| |||||  |||||||||||| |  | |||||| ||||||| |||||||||||| ||||||||||| | |||||  ||||| ||| |||||    
T  46226783 gttttgcacctgtggcagttttggcccccgatgccaattttaactcggtatacgctgacgtggcaccctaagtgaggtgccacgtgttaattttttttt 46226881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 476 - 549
Target Start/End: Complemental strand, 27178379 - 27178306
Alignment:
Q  476 ctaagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacacccta 549  Q
    ||||||||||||  |||||| |||||| |||||||  | |||||||||| |||||||||||| ||| |||||||    
T  27178379 ctaagttttgcatctgtggtagttttgacccccaatgccaattttgacttggtctacgctgatgtgtcacccta 27178306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 477 - 550
Target Start/End: Complemental strand, 28204717 - 28204644
Alignment:
Q  477 taagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaa 550  Q
    ||||||||| | ||||||| ||||||||| ||||  | |||||||||||||||||| |||||||| || |||||    
T  28204717 taagttttgtatttgtggtagttttggcctccaatgccaattttgactcggtctacactgacgtggcatcctaa 28204644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 390 - 443
Target Start/End: Original strand, 38177178 - 38177231
Alignment:
Q  390 ggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccc 443  Q
    |||||||| |||||||||||||| ||| |||  |||||||||||||||||||||    
T  38177178 ggcttaatggcaattttagccccttaactttcccaaagttgcgattttggcccc 38177231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 505 - 578
Target Start/End: Complemental strand, 48348462 - 48348389
Alignment:
Q  505 ccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttattttattttt 578  Q
    ||||||| | ||||||||||||||||||||||||||| ||| ||||||| | |||||  |||| |||| |||||    
T  48348462 ccccaagcccaattttgactcggtctacgctgacgtggcacgctaagtgaggtgccacgtgttttttttttttt 48348389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 385 - 437
Target Start/End: Complemental strand, 14349427 - 14349375
Alignment:
Q  385 taataggcttaatagcaattttagccccctaaatttttcaaagttgcgatttt 437  Q
    ||||||||||||||||| |||| ||||||||| |||| | |||||||||||||    
T  14349427 taataggcttaatagcagttttcgccccctaacttttacgaagttgcgatttt 14349375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 497 - 541
Target Start/End: Original strand, 33943690 - 33943734
Alignment:
Q  497 gttttggcccccaagactaattttgactcggtctacgctgacgtg 541  Q
    |||||||||||| |||| ||||||||||||||| |||||||||||    
T  33943690 gttttggccccctagaccaattttgactcggtcaacgctgacgtg 33943734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 497 - 541
Target Start/End: Original strand, 35494164 - 35494208
Alignment:
Q  497 gttttggcccccaagactaattttgactcggtctacgctgacgtg 541  Q
    |||||||||||| |||| ||||||||||||||| |||||||||||    
T  35494164 gttttggccccctagaccaattttgactcggtcaacgctgacgtg 35494208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 442
Target Start/End: Complemental strand, 44127665 - 44127609
Alignment:
Q  386 aataggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggccc 442  Q
    |||||||||||||||| ||||| | | |||| ||| |||||||||||||||||||||    
T  44127665 aataggcttaatagcagttttaactctctaattttctcaaagttgcgattttggccc 44127609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 477 - 553
Target Start/End: Complemental strand, 47189825 - 47189749
Alignment:
Q  477 taagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    ||||||||||| ||||||  |||||| ||| |||||  ||||||||||  |||||| ||||||||||||| ||||||    
T  47189825 taagttttgcatttgtggcagttttgaccctcaagatcaattttgacttcgtctacactgacgtgacaccttaagtg 47189749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 497 - 545
Target Start/End: Original strand, 55093254 - 55093302
Alignment:
Q  497 gttttggcccccaagactaattttgactcggtctacgctgacgtgacac 545  Q
    |||||||||||| | || ||||||||||||||| |||||||||||||||    
T  55093254 gttttggccccctaaaccaattttgactcggtcaacgctgacgtgacac 55093302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 519 - 578
Target Start/End: Complemental strand, 2205717 - 2205658
Alignment:
Q  519 ttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttattttattttt 578  Q
    ||||||||||| ||||||||||||||| ||||||| | ||||| |||| ||||| |||||    
T  2205717 ttgactcggtcaacgctgacgtgacactctaagtgaggtgccacatgtaatttttttttt 2205658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 497 - 572
Target Start/End: Complemental strand, 20432395 - 20432320
Alignment:
Q  497 gttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttatttt 572  Q
    |||||| ||||||||   |||||||||| |||||||||||||||  ||||||||||| | |||||  |||||||||    
T  20432395 gttttgacccccaaggacaattttgacttggtctacgctgacgtagcaccctaagtgaggtgccacgtgttatttt 20432320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 515 - 570
Target Start/End: Complemental strand, 36687784 - 36687729
Alignment:
Q  515 aattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttatt 570  Q
    |||||||||||||| |||||||||||| ||||||||||| | |||||  |||||||    
T  36687784 aattttgactcggtttacgctgacgtggcaccctaagtgaggtgccacgtgttatt 36687729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 476 - 570
Target Start/End: Complemental strand, 36677743 - 36677649
Alignment:
Q  476 ctaagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttatt 570  Q
    ||||| |||||| ||||||   |||||||| |||||   |||||||||||||| |||||||||||| |||| |||||| | |||||  |||||||    
T  36677743 ctaagatttgcatttgtggcaattttggcctccaaggtcaattttgactcggtttacgctgacgtggcaccttaagtgaggtgccacgtgttatt 36677649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 387 - 452
Target Start/End: Complemental strand, 36687912 - 36687846
Alignment:
Q  387 ataggcttaatagcaattttagccccctaaatttttcaaagttgcgatttt-ggcccctaagaagaa 452  Q
    ||||| ||||||||| |||||||||  ||| |||| ||||||||||||||| | |||||||||||||    
T  36687912 ataggtttaatagcagttttagcccattaatttttccaaagttgcgattttagtcccctaagaagaa 36687846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 499 - 541
Target Start/End: Complemental strand, 51226400 - 51226358
Alignment:
Q  499 tttggcccccaagactaattttgactcggtctacgctgacgtg 541  Q
    |||||||||| |||| ||||||||||||||| |||||||||||    
T  51226400 tttggccccctagaccaattttgactcggtcaacgctgacgtg 51226358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 449
Target Start/End: Original strand, 20432189 - 20432250
Alignment:
Q  389 aggcttaatagcaattttagccccctaaatttttcaaagttgcgattttgg-cccctaagaa 449  Q
    ||||||||||||| |||| ||||||||| |||| | ||||||||| ||||| ||||||||||    
T  20432189 aggcttaatagcagtttttgccccctaacttttacgaagttgcgactttggtcccctaagaa 20432250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 476 - 553
Target Start/End: Original strand, 28712536 - 28712613
Alignment:
Q  476 ctaagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    ||||||||||||  ||| |  ||||| || |||||| | || ||||||||||||||| |||||||| |||||||||||    
T  28712536 ctaagttttgcatctgtagcagttttagcacccaaggccaactttgactcggtctacactgacgtggcaccctaagtg 28712613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 441
Target Start/End: Complemental strand, 28944281 - 28944228
Alignment:
Q  388 taggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcc 441  Q
    |||||||||||||| |||| | ||||||| |||| | |||||||||||||||||    
T  28944281 taggcttaatagcagtttttgtcccctaacttttactaagttgcgattttggcc 28944228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 450
Target Start/End: Complemental strand, 36677833 - 36677769
Alignment:
Q  387 ataggcttaatagcaattttagccccctaaatttttc-aaagttgcgatttt-ggcccctaagaag 450  Q
    ||||| ||||||||| ||||| ||||||||||||||| |||||||||||||| | |||||||||||    
T  36677833 ataggtttaatagcagtttta-ccccctaaatttttccaaagttgcgattttagtcccctaagaag 36677769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 375 - 443
Target Start/End: Complemental strand, 4474396 - 4474328
Alignment:
Q  375 tcattatttataataggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccc 443  Q
    |||||||||||  |||| ||||||||| ||||  || ||||| |||| | |||||||||||||||||||    
T  4474396 tcattatttattttaggtttaatagcagttttctcctcctaacttttacgaagttgcgattttggcccc 4474328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 497 - 545
Target Start/End: Original strand, 5635510 - 5635558
Alignment:
Q  497 gttttggcccccaagactaattttgactcggtctacgctgacgtgacac 545  Q
    |||||||||||| | || |||||||||||| || |||||||||||||||    
T  5635510 gttttggccccctataccaattttgactcgatcaacgctgacgtgacac 5635558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 519 - 551
Target Start/End: Complemental strand, 9153665 - 9153633
Alignment:
Q  519 ttgactcggtctacgctgacgtgacaccctaag 551  Q
    ||||||||||| |||||||||||||||||||||    
T  9153665 ttgactcggtcaacgctgacgtgacaccctaag 9153633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 497 - 545
Target Start/End: Original strand, 10730564 - 10730612
Alignment:
Q  497 gttttggcccccaagactaattttgactcggtctacgctgacgtgacac 545  Q
    ||||| |||||| |||| ||||||||||||||| ||| |||||||||||    
T  10730564 gttttcgccccctagaccaattttgactcggtcaacgttgacgtgacac 10730612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 390 - 449
Target Start/End: Complemental strand, 20432497 - 20432437
Alignment:
Q  390 ggcttaatagcaattttagccccctaaatttttcaaagttgcgattttgg-cccctaagaa 449  Q
    |||||||||||| ||||| |||||||| ||||  ||||||| |||||||| ||||||||||    
T  20432497 ggcttaatagcatttttaaccccctaacttttcaaaagttgtgattttggtcccctaagaa 20432437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 386 - 438
Target Start/End: Complemental strand, 25154499 - 25154447
Alignment:
Q  386 aataggcttaatagcaattttagccccctaaatttttcaaagttgcgattttg 438  Q
    |||||||||||||||| ||||| |||||||| |||  |||||||| |||||||    
T  25154499 aataggcttaatagcagttttaaccccctaactttaccaaagttgtgattttg 25154447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 465 - 532
Target Start/End: Original strand, 25248761 - 25248829
Alignment:
Q  465 aaaaccgtccactaagttttgcacttgtggtggtttt-ggcccccaagactaattttgactcggtctac 532  Q
    ||||||| || ||||||||||||  |||||| ||||| || ||||||||  ||||||||||||||||||    
T  25248761 aaaaccgccctctaagttttgcatctgtggtagtttttggtccccaagatcaattttgactcggtctac 25248829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 497 - 541
Target Start/End: Complemental strand, 33447182 - 33447138
Alignment:
Q  497 gttttggcccccaagactaattttgactcggtctacgctgacgtg 541  Q
    |||||| ||||| |||| ||||||||||||||| |||||||||||    
T  33447182 gttttgaccccctagaccaattttgactcggtcaacgctgacgtg 33447138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 497 - 541
Target Start/End: Complemental strand, 33944379 - 33944335
Alignment:
Q  497 gttttggcccccaagactaattttgactcggtctacgctgacgtg 541  Q
    |||||||||||| | || ||||||||||||||| |||||||||||    
T  33944379 gttttggccccctataccaattttgactcggtcaacgctgacgtg 33944335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 497 - 541
Target Start/End: Complemental strand, 40989549 - 40989505
Alignment:
Q  497 gttttggcccccaagactaattttgactcggtctacgctgacgtg 541  Q
    ||||| |||||| |||| ||||||||||||||| |||||||||||    
T  40989549 gtttttgccccctagaccaattttgactcggtcaacgctgacgtg 40989505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 497 - 545
Target Start/End: Original strand, 46984985 - 46985033
Alignment:
Q  497 gttttggcccccaagactaattttgactcggtctacgctgacgtgacac 545  Q
    |||||||||||| | |  ||||||||||||||| |||||||||||||||    
T  46984985 gttttggccccctaaatcaattttgactcggtcaacgctgacgtgacac 46985033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 497 - 541
Target Start/End: Original strand, 49001813 - 49001857
Alignment:
Q  497 gttttggcccccaagactaattttgactcggtctacgctgacgtg 541  Q
    |||||| ||||| |||| ||||||||||||||| |||||||||||    
T  49001813 gttttgaccccctagaccaattttgactcggtcaacgctgacgtg 49001857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 497 - 541
Target Start/End: Original strand, 51225089 - 51225133
Alignment:
Q  497 gttttggcccccaagactaattttgactcggtctacgctgacgtg 541  Q
    |||||||||||| | || ||||||||||||||| |||||||||||    
T  51225089 gttttggccccctaaaccaattttgactcggtcaacgctgacgtg 51225133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 497 - 541
Target Start/End: Complemental strand, 55094530 - 55094486
Alignment:
Q  497 gttttggcccccaagactaattttgactcggtctacgctgacgtg 541  Q
    ||||| |||||| |||| ||||||||||||||| |||||||||||    
T  55094530 gttttagccccctagaccaattttgactcggtcaacgctgacgtg 55094486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 70; Significance: 3e-31; HSPs: 69)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 473 - 578
Target Start/End: Original strand, 37431622 - 37431727
Alignment:
Q  473 ccactaagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttatttt 572  Q
    ||||||||||||||| ||||||  ||||||||||||||| | ||||||||||||||||||||||||||| ||||||||||| | ||||| ||||||||||    
T  37431622 ccactaagttttgcatttgtggcagttttggcccccaaggccaattttgactcggtctacgctgacgtggcaccctaagtgaggtgccacatgttatttt 37431721  T
Q  573 attttt 578  Q
    ||||||    
T  37431722 attttt 37431727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 389 - 553
Target Start/End: Complemental strand, 14943858 - 14943700
Alignment:
Q  389 aggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccctaagaagaagnnnnnnnctataaaaccgtccactaagttttgcac 488  Q
    ||||||||||||| |||||||||| ||| |||| |||||||| |||||||| | ||||||| ||        ||| ||||||| || |||||||||||||    
T  14943858 aggcttaatagcagttttagccccttaacttttccaaagttgtgattttggtctctaagaaaaa------aactacaaaaccgccctctaagttttgcac 14943765  T
Q  489 ttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtg 553  Q
     |||||   |||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||    
T  14943764 ctgtggcatttttggcccccaaggctaattttgactcggtctacgctgatgtggcaccctaagtg 14943700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 389 - 570
Target Start/End: Original strand, 34679096 - 34679273
Alignment:
Q  389 aggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcc-cctaagaagaagnnnnnnnctataaaaccgtccac-taagttttgc 486  Q
    ||||||||||||| |||||||||||||| |||| ||||||||||||||||||| |||||||| ||         || ||||||| || | ||||||||||    
T  34679096 aggcttaatagcagttttagccccctaacttttccaaagttgcgattttggccacctaagaaaaaaat------tacaaaaccgcccccctaagttttgc 34679189  T
Q  487 acttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttatt 570  Q
    || |||||  ||||||||| ||||||| ||||||||| ||||||||||||||||| ||||||||||| | |||||  |||||||    
T  34679190 acatgtggcagttttggcctccaagacaaattttgacccggtctacgctgacgtggcaccctaagtgaggtgccacgtgttatt 34679273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 462 - 578
Target Start/End: Complemental strand, 5008534 - 5008418
Alignment:
Q  462 tataaaaccgtccactaagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgcca 561  Q
    ||||||||||||| |||||||||||| ||||||   ||||||||| ||||   ||||||||||||||||||||||||||| ||||||||||| |||||||    
T  5008534 tataaaaccgtcctctaagttttgcatttgtggcaattttggccctcaaggtcaattttgactcggtctacgctgacgtggcaccctaagtgagatgcca 5008435  T
Q  562 tatgttattttattttt 578  Q
     ||||| |||| |||||    
T  5008434 catgttttttttttttt 5008418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 465 - 577
Target Start/End: Complemental strand, 44617982 - 44617870
Alignment:
Q  465 aaaaccgtccactaagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatat 564  Q
    ||||||| || |||||||||||| ||||||  ||||||||||||||||| ||||||||||||||||||||||||||| |||||||| || | || ||  |    
T  44617982 aaaaccgccccctaagttttgcatttgtggcagttttggcccccaagaccaattttgactcggtctacgctgacgtggcaccctaaatgaggtgtcacct 44617883  T
Q  565 gttattttatttt 577  Q
    |||||||||||||    
T  44617882 gttattttatttt 44617870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 390 - 572
Target Start/End: Original strand, 39918434 - 39918612
Alignment:
Q  390 ggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccc-taagaagaagnnnnnnnctataaaaccgtccactaagttttgcac 488  Q
    |||||||||| | |||||||||||||| ||| |||||||||||||||||||||| |||||| ||        ||  |||| || || ||||||||||||     
T  39918434 ggcttaatagtagttttagccccctaactttctcaaagttgcgattttggccccctaagaaaaa-----aaactgcaaaatcgcccgctaagttttgcat 39918528  T
Q  489 ttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttatttt 572  Q
     |||||  ||||||||||||||| | |||||||||||||||| |||||||||| ||||||||||| | |||||  |||||||||    
T  39918529 atgtggctgttttggcccccaaggccaattttgactcggtcttcgctgacgtggcaccctaagtgaggtgccacgtgttatttt 39918612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 395 - 578
Target Start/End: Original strand, 34760851 - 34761031
Alignment:
Q  395 aatagcaattttagccccctaaatttttcaaagttgcgattttggcccctaagaagaagnnnnnnnctataaaaccgtccactaagttttgcacttgtgg 494  Q
    ||||||||||||| |||| ||| |||  ||||||||||||||||| ||||||||| ||        ||| ||||||| || ||||||||||||  |||||    
T  34760851 aatagcaattttaaccccataattttcccaaagttgcgattttggtccctaagaaaaa---aaaaactacaaaaccgccccctaagttttgcatatgtgg 34760947  T
Q  495 tggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttattttattttt 578  Q
      ||||||||||||||||| |||||||||  |||||| ||||||||| ||||||||||| | || || ||||| |||| |||||    
T  34760948 cagttttggcccccaagaccaattttgacgtggtctatgctgacgtggcaccctaagtgaggtgtcacatgttttttttttttt 34761031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 387 - 552
Target Start/End: Original strand, 25333496 - 25333656
Alignment:
Q  387 ataggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccct-aagaagaagnnnnnnnctataaaaccgtccactaagttttg 485  Q
    |||||||||||| |||||||| |||| ||| |||| ||||||||||||||||| |||| ||||| ||        ||||||||||  || ||||||||||    
T  25333496 ataggcttaataacaattttaaccccttaacttttccaaagttgcgattttggtcccttaagaaaaa------aactataaaaccaccccctaagttttg 25333589  T
Q  486 cacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagt 552  Q
    ||| |||||  ||||||| | ||||| | |||||||||| |||||||||||||||| ||||||||||    
T  25333590 cacctgtggcagttttggtctccaaggccaattttgacttggtctacgctgacgtggcaccctaagt 25333656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 389 - 572
Target Start/End: Original strand, 43028793 - 43028971
Alignment:
Q  389 aggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccc-taagaagaagnnnnnnnctataaaaccgtccactaagttttgca 487  Q
    ||||||||||||| |||||||||||||| || | ||||||||||||||||||||| |||||| ||        ||| ||||||  || ||||||||||||    
T  43028793 aggcttaatagcagttttagccccctaacttctccaaagttgcgattttggccccctaagaaaaa-----aaactacaaaacccccc-ctaagttttgca 43028886  T
Q  488 cttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttatttt 572  Q
      |||||  ||||||||| | | | | ||||||||||||||||||||||||||| ||||||||||| | |||||  |||||||||    
T  43028887 tctgtggcagttttggcctctagggccaattttgactcggtctacgctgacgtggcaccctaagtgaggtgccaagtgttatttt 43028971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 389 - 553
Target Start/End: Complemental strand, 19399490 - 19399332
Alignment:
Q  389 aggcttaatagcaattttagccccctaaatttttcaaagttgcgattttgg-cccctaagaagaagnnnnnnnctataaaaccgtccactaagttttgca 487  Q
    ||||||||||||| |||||||||||||| ||||||||||||| |||||||| ||| |||| | ||        ||| ||||||||||| |||||||||||    
T  19399490 aggcttaatagcagttttagccccctaactttttcaaagttgtgattttggtcccttaagtaaaa----aaaactacaaaaccgtccattaagttttgca 19399395  T
Q  488 cttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    | | ||   | ||||||| |||||   ||||||||||||||||||||||||||| |||||||||||    
T  19399394 cctatgtcagctttggcctccaag---aattttgactcggtctacgctgacgtggcaccctaagtg 19399332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 465 - 572
Target Start/End: Original strand, 14489284 - 14489391
Alignment:
Q  465 aaaaccgtccactaagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatat 564  Q
    ||||||| || ||||||||||||| |||||  |||||| || ||||||| ||||||||||||||||||||||| ||| ||||||| ||| | |||||  |    
T  14489284 aaaaccgccccctaagttttgcacctgtggcagttttgacctccaagaccaattttgactcggtctacgctgatgtggcaccctacgtgaggtgccacgt 14489383  T
Q  565 gttatttt 572  Q
    ||||||||    
T  14489384 gttatttt 14489391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 387 - 553
Target Start/End: Complemental strand, 5470652 - 5470492
Alignment:
Q  387 ataggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccc-taagaagaagnnnnnnnctataaaaccgtccactaagttttg 485  Q
    |||||||| |||||| |||||||||||||| |||   |||||||||||||||||||| ||| || ||        ||| ||||||| ||  ||||||||     
T  5470652 ataggctttatagcagttttagccccctaactttcctaaagttgcgattttggccccctaaaaaaaa-------actacaaaaccgccccttaagtttta 5470560  T
Q  486 cacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    ||  |||||  ||||||||||||||| | ||||||||||||||||| ||||||||| |||||||||||    
T  5470559 catctgtggcagttttggcccccaaggccaattttgactcggtctatgctgacgtggcaccctaagtg 5470492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 476 - 553
Target Start/End: Original strand, 32969639 - 32969716
Alignment:
Q  476 ctaagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    ||||||||| || ||||||  |||||||| |||||| | ||||||||||||||||||||||||||||| |||||||||    
T  32969639 ctaagtttttcatttgtggcagttttggctcccaaggccaattttgactcggtctacgctgacgtgacgccctaagtg 32969716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 387 - 553
Target Start/End: Original strand, 6592721 - 6592885
Alignment:
Q  387 ataggcttaatagcaattttagccccctaaatttttcaaagttgcgattttg-gcccctaagaagaagnnnnnnnctataaaaccgtccactaagttttg 485  Q
    ||||||||||||||| |||||||||||||| |||| ||||||||||||||||  ||||||||||||          || ||||| | || ||||||||||    
T  6592721 ataggcttaatagcagttttagccccctaacttttccaaagttgcgattttgaccccctaagaaga--tttttttttacaaaactg-cccctaagttttg 6592817  T
Q  486 cacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    ||  |||||  |||||||||| |||  ||||||||||||| |||||||||||| |  |||||||||||    
T  6592818 catatgtggcagttttggccctcaatgctaattttgactcagtctacgctgacattgcaccctaagtg 6592885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 388 - 443
Target Start/End: Complemental strand, 25375189 - 25375134
Alignment:
Q  388 taggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccc 443  Q
    |||||||||||||| |||||||||||||| |||||||| |||||||||||||||||    
T  25375189 taggcttaatagcagttttagccccctaattttttcaatgttgcgattttggcccc 25375134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 386 - 443
Target Start/End: Original strand, 19206138 - 19206195
Alignment:
Q  386 aataggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccc 443  Q
    ||||||||||||||||||||| ||||||||| |||  |||||||||||||||||||||    
T  19206138 aataggcttaatagcaattttcgccccctaattttcacaaagttgcgattttggcccc 19206195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 393 - 570
Target Start/End: Complemental strand, 24306331 - 24306157
Alignment:
Q  393 ttaatagcaattttagccccctaaatttttcaaagttgcgattttggcc-cctaagaagaagnnnnnnnctataaaaccgtccactaagttttgcacttg 491  Q
    |||||||||  |||| |||||||| |||||||||||||||||||| ||| | || ||| ||        ||||||||||||||  |||||||||||| ||    
T  24306331 ttaatagcatatttaaccccctaattttttcaaagttgcgattttagcctcttatgaaaaa----aaaactataaaaccgtcccttaagttttgcacatg 24306236  T
Q  492 tggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttatt 570  Q
    ||   ||| |||||||||||   |||||||||| | |||||||||| ||||||||||||||| | || || ||||||||    
T  24306235 tgacagttctggcccccaaggtcaattttgacttgatctacgctgatgtgacaccctaagtgaggtgtcacatgttatt 24306157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 388 - 577
Target Start/End: Complemental strand, 24472760 - 24472578
Alignment:
Q  388 taggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccctaagaagaagnnnnnnnctataaaaccgtccactaagttttgca 487  Q
    |||||||||||||| ||||||  |||||| |||| |||||||| |||||| ||||||||||| ||        ||| ||||||  || ||||||||||||    
T  24472760 taggcttaatagcagttttagaaccctaatttttccaaagttgtgattttagcccctaagaaaaa-----aaactacaaaacc--cccctaagttttgca 24472668  T
Q  488 cttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttattttatttt 577  Q
      |||||  ||||||||| ||||  | ||||||||||| |||||| || ||||| ||||||||||| | |||||  ||||||||| ||||    
T  24472667 tctgtggcagttttggccgccaatgccaattttgactccgtctacactaacgtggcaccctaagtgaggtgccacgtgttattttttttt 24472578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 465 - 552
Target Start/End: Original strand, 4925510 - 4925597
Alignment:
Q  465 aaaaccgtccactaagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagt 552  Q
    |||||||||| ||||||||||||  |||||  |||||| |||| ||||| |||||||  || ||||||||||||||| ||||||||||    
T  4925510 aaaaccgtcccctaagttttgcatatgtggcagttttgacccctaagaccaattttggttctgtctacgctgacgtggcaccctaagt 4925597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 389 - 511
Target Start/End: Original strand, 25379 - 25502
Alignment:
Q  389 aggcttaatagcaattttagccccctaaatttttcaaagttgcgattttgg-cccctaagaagaagnnnnnnnctataaaaccgtccactaagttttgca 487  Q
    |||||||||| || |||| ||||||||| |||  ||||||| ||||||||| ||||||||||||||       ||| ||||||| || ||||||||||||    
T  25379 aggcttaataacagtttttgccccctaactttcccaaagttacgattttggccccctaagaagaagaaaaaaactacaaaaccgccccctaagttttgca 25478  T
Q  488 cttgtggtggttttggcccccaag 511  Q
    | |||||  |||||| ||||||||    
T  25479 cctgtggcagttttgacccccaag 25502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 515 - 577
Target Start/End: Complemental strand, 36195772 - 36195710
Alignment:
Q  515 aattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttattttatttt 577  Q
    ||||||||||||||||||||||||||| ||||||||||| | |||||| |||| |||| ||||    
T  36195772 aattttgactcggtctacgctgacgtggcaccctaagtgaggtgccatgtgtttttttttttt 36195710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 386 - 443
Target Start/End: Original strand, 5362171 - 5362228
Alignment:
Q  386 aataggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccc 443  Q
    |||||||||||||| |||||| ||||||||| |||  |||||||||||||||||||||    
T  5362171 aataggcttaatagtaattttcgccccctaactttcacaaagttgcgattttggcccc 5362228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 388 - 449
Target Start/End: Complemental strand, 14489526 - 14489465
Alignment:
Q  388 taggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccctaagaa 449  Q
    |||||||||||||| |||| ||||||||| |||  | |||||||||||||||||||||||||    
T  14489526 taggcttaatagcagttttcgccccctaactttcacgaagttgcgattttggcccctaagaa 14489465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 477 - 578
Target Start/End: Complemental strand, 41196461 - 41196360
Alignment:
Q  477 taagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttattttattt 576  Q
    |||||||||||  |||||  ||||| ||||||||    ||||| |||| |||||||||||||||| ||||||||||| | ||||| |||||||||| |||    
T  41196461 taagttttgcatatgtggaagtttttgcccccaatgtcaatttagacttggtctacgctgacgtggcaccctaagtgaggtgccacatgttatttttttt 41196362  T
Q  577 tt 578  Q
    ||    
T  41196361 tt 41196360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 497 - 553
Target Start/End: Complemental strand, 2609300 - 2609244
Alignment:
Q  497 gttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    |||||| |||||||||  ||||||||||||||||||||||| ||| |||||||||||    
T  2609300 gttttgacccccaagatcaattttgactcggtctacgctgatgtggcaccctaagtg 2609244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 391 - 439
Target Start/End: Original strand, 19399183 - 19399231
Alignment:
Q  391 gcttaatagcaattttagccccctaaatttttcaaagttgcgattttgg 439  Q
    |||||||||||||||||||| ||||| ||| ||||||||||||||||||    
T  19399183 gcttaatagcaattttagcctcctaactttctcaaagttgcgattttgg 19399231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 465 - 553
Target Start/End: Original strand, 25411612 - 25411700
Alignment:
Q  465 aaaaccgtccactaagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    ||||||| || ||||||||||||  |||||  |||||  ||||||| || ||||||||||||||||| ||||||||| |||| ||||||    
T  25411612 aaaaccgccccctaagttttgcatctgtggcagttttcacccccaataccaattttgactcggtctatgctgacgtggcaccataagtg 25411700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 476 - 552
Target Start/End: Original strand, 37803205 - 37803280
Alignment:
Q  476 ctaagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagt 552  Q
    |||||||||||| ||||||  |||||| |||| | | | ||||||||||||||||||||||||||| ||||||||||    
T  37803205 ctaagttttgcatttgtggcagttttgaccccaatgtc-aattttgactcggtctacgctgacgtggcaccctaagt 37803280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 515 - 570
Target Start/End: Complemental strand, 5362368 - 5362313
Alignment:
Q  515 aattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttatt 570  Q
    ||||||||||| |||||||||||||||||| |||||||| | ||||| ||||||||    
T  5362368 aattttgactcagtctacgctgacgtgacatcctaagtgaggtgccacatgttatt 5362313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 477 - 572
Target Start/End: Complemental strand, 8553774 - 8553680
Alignment:
Q  477 taagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttatttt 572  Q
    ||||||||||| ||||||  |||||| | ||||| | | | |||||||||||||| ||||||||||||||||||||| | |||||  |||||||||    
T  8553774 taagttttgcatttgtggcagttttgtctcccaa-agtcaatttgactcggtctatgctgacgtgacaccctaagtgaggtgccacgtgttatttt 8553680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 389 - 444
Target Start/End: Original strand, 21361880 - 21361934
Alignment:
Q  389 aggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccct 444  Q
    |||||||||||||||||| ||||| ||| ||| |||||||||||||||||||||||    
T  21361880 aggcttaatagcaatttttgcccc-taactttatcaaagttgcgattttggcccct 21361934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 515 - 578
Target Start/End: Original strand, 31827647 - 31827710
Alignment:
Q  515 aattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttattttattttt 578  Q
    |||||||| |||||||||||||||||| ||||||||||| | ||||| ||||| |||| |||||    
T  31827647 aattttgattcggtctacgctgacgtggcaccctaagtgaggtgccacatgttttttttttttt 31827710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 388 - 443
Target Start/End: Original strand, 44297561 - 44297616
Alignment:
Q  388 taggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccc 443  Q
    |||||||||||||| |||||||| ||||| ||||  ||||||||||||||||||||    
T  44297561 taggcttaatagcacttttagcctcctaatttttcaaaagttgcgattttggcccc 44297616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 389 - 443
Target Start/End: Complemental strand, 21358420 - 21358366
Alignment:
Q  389 aggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccc 443  Q
    ||||||||||||| |||| ||||||||| ||| ||||||||| ||||||||||||    
T  21358420 aggcttaatagcagtttttgccccctaactttctcaaagttgtgattttggcccc 21358366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 389 - 439
Target Start/End: Complemental strand, 36715609 - 36715559
Alignment:
Q  389 aggcttaatagcaattttagccccctaaatttttcaaagttgcgattttgg 439  Q
    ||||||||||||| ||||||| |||||| ||||| ||||||||||||||||    
T  36715609 aggcttaatagcagttttagctccctaacttttttaaagttgcgattttgg 36715559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 497 - 570
Target Start/End: Complemental strand, 4576754 - 4576681
Alignment:
Q  497 gttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttatt 570  Q
    |||||||||||||   | |||||||||||||||||||||| |||| ||||||||||| | |||||  |||||||    
T  4576754 gttttggcccccactgccaattttgactcggtctacgctggcgtggcaccctaagtgaggtgccacgtgttatt 4576681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 381 - 438
Target Start/End: Original strand, 12948880 - 12948937
Alignment:
Q  381 tttataataggcttaatagcaattttagccccctaaatttttcaaagttgcgattttg 438  Q
    |||||| |||| ||||||||| |||||||||||||||||||   ||||||||||||||    
T  12948880 tttatattaggtttaatagcagttttagccccctaaattttaagaagttgcgattttg 12948937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 465 - 550
Target Start/End: Complemental strand, 18969337 - 18969252
Alignment:
Q  465 aaaaccgtccactaagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaa 550  Q
    |||| ||||| |||| ||||| | ||||||  |||||| |||||||| | |||||||||| || ||||||||||||||||| ||||    
T  18969337 aaaatcgtcctctaaattttgtatttgtggctgttttgacccccaaggccaattttgactaggcctacgctgacgtgacactctaa 18969252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 476 - 572
Target Start/End: Original strand, 8857128 - 8857224
Alignment:
Q  476 ctaagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttatttt 572  Q
    |||||||||||| ||||||  ||||||||||||||  | |||||||||| |||| ||||||| ||| |||| ||| || | |||||  |||||||||    
T  8857128 ctaagttttgcatttgtggcagttttggcccccaatgccaattttgacttggtcaacgctgatgtggcaccttaaatgaggtgccacgtgttatttt 8857224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 497 - 545
Target Start/End: Original strand, 14983369 - 14983417
Alignment:
Q  497 gttttggcccccaagactaattttgactcggtctacgctgacgtgacac 545  Q
    |||||||||||| |||  ||||||||||||||| |||||||||||||||    
T  14983369 gttttggccccctagatcaattttgactcggtcaacgctgacgtgacac 14983417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 497 - 545
Target Start/End: Complemental strand, 16144838 - 16144790
Alignment:
Q  497 gttttggcccccaagactaattttgactcggtctacgctgacgtgacac 545  Q
    ||||||||||||  ||| ||||||||||||||| |||||||||||||||    
T  16144838 gttttggccccctggaccaattttgactcggtcaacgctgacgtgacac 16144790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 385 - 448
Target Start/End: Complemental strand, 22333394 - 22333330
Alignment:
Q  385 taataggcttaatagcaattttagccccctaaattttt-caaagttgcgattttggcccctaaga 448  Q
    ||||||||| ||||||| |||| ||||||||  ||||| |||||||||||||||||||| |||||    
T  22333394 taataggctgaatagcagttttggccccctatgttttttcaaagttgcgattttggcccttaaga 22333330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 497 - 545
Target Start/End: Complemental strand, 23686711 - 23686663
Alignment:
Q  497 gttttggcccccaagactaattttgactcggtctacgctgacgtgacac 545  Q
    |||||||||||| |||  ||||||||||||||| |||||||||||||||    
T  23686711 gttttggccccctagatcaattttgactcggtcaacgctgacgtgacac 23686663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 497 - 541
Target Start/End: Original strand, 28719480 - 28719524
Alignment:
Q  497 gttttggcccccaagactaattttgactcggtctacgctgacgtg 541  Q
    |||||||||||| |||| ||||||||||||||| |||||||||||    
T  28719480 gttttggccccctagaccaattttgactcggtcaacgctgacgtg 28719524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 465 - 553
Target Start/End: Original strand, 35718716 - 35718804
Alignment:
Q  465 aaaaccgtccactaagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    |||||||||| |||  |||||||  |||||  ||||||||| ||||| | ||||||||||| ||||||| ||| ||| |||||||||||    
T  35718716 aaaaccgtcccctacattttgcatctgtggcagttttggcctccaaggccaattttgactcagtctacggtgatgtggcaccctaagtg 35718804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 381 - 449
Target Start/End: Complemental strand, 36177413 - 36177345
Alignment:
Q  381 tttataataggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccctaagaa 449  Q
    ||||||| |||||||||| || |||||||||| ||| |||    |||||||||||||||||||||||||    
T  36177413 tttataaaaggcttaataacagttttagccccttaagtttcaagaagttgcgattttggcccctaagaa 36177345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 497 - 545
Target Start/End: Complemental strand, 43741713 - 43741665
Alignment:
Q  497 gttttggcccccaagactaattttgactcggtctacgctgacgtgacac 545  Q
    |||||| ||||| |||| ||||||||||||||| |||||||||||||||    
T  43741713 gttttgaccccctagaccaattttgactcggtcaacgctgacgtgacac 43741665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 497 - 545
Target Start/End: Complemental strand, 44078441 - 44078393
Alignment:
Q  497 gttttggcccccaagactaattttgactcggtctacgctgacgtgacac 545  Q
    |||||||||||| |||| ||||||||||||||| |||||||| ||||||    
T  44078441 gttttggccccctagaccaattttgactcggtcaacgctgacatgacac 44078393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 498 - 541
Target Start/End: Complemental strand, 52189 - 52146
Alignment:
Q  498 ttttggcccccaagactaattttgactcggtctacgctgacgtg 541  Q
    ||||||||||| |||| ||||||||||||||| |||||||||||    
T  52189 ttttggccccctagaccaattttgactcggtcaacgctgacgtg 52146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 381 - 444
Target Start/End: Complemental strand, 4576863 - 4576801
Alignment:
Q  381 tttataataggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccct 444  Q
    ||||| || |||||||||||| |||||| ||||||| |||  ||||||||||||||||||||||    
T  4576863 tttattattggcttaatagcagttttagacccctaactttc-caaagttgcgattttggcccct 4576801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 519 - 562
Target Start/End: Complemental strand, 13732355 - 13732312
Alignment:
Q  519 ttgactcggtctacgctgacgtgacaccctaagtgggatgccat 562  Q
    ||||||||||| ||||||||||| ||||||||||| ||||||||    
T  13732355 ttgactcggtcaacgctgacgtggcaccctaagtgagatgccat 13732312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 516 - 575
Target Start/End: Complemental strand, 19206340 - 19206281
Alignment:
Q  516 attttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttattttatt 575  Q
    |||||||||||||||||||| || ||||| |||||||| | |||||  ||||||||||||    
T  19206340 attttgactcggtctacgctaacatgacatcctaagtgaggtgccacgtgttattttatt 19206281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 393 - 443
Target Start/End: Original strand, 4576546 - 4576596
Alignment:
Q  393 ttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccc 443  Q
    ||||||||| |||||||| ||||| |||||||||||||  |||||||||||    
T  4576546 ttaatagcagttttagcctcctaactttttcaaagttgtcattttggcccc 4576596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 390 - 440
Target Start/End: Original strand, 15022838 - 15022888
Alignment:
Q  390 ggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggc 440  Q
    |||||||||||| |||||||||||||| ||||  ||||||| |||||||||    
T  15022838 ggcttaatagcagttttagccccctaacttttcgaaagttgtgattttggc 15022888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 476 - 578
Target Start/End: Original strand, 27489514 - 27489616
Alignment:
Q  476 ctaagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttattttatt 575  Q
    |||| |||||||  |||||  ||||||||| |||||   |||||||||||||| |||||||||||| || |||||||| | || ||  ||||||||| ||    
T  27489514 ctaacttttgcatctgtggcagttttggcctccaagggcaattttgactcggtttacgctgacgtggcatcctaagtgaggtgacacgtgttattttttt 27489613  T
Q  576 ttt 578  Q
    |||    
T  27489614 ttt 27489616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 519 - 553
Target Start/End: Original strand, 42445497 - 42445531
Alignment:
Q  519 ttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    ||||||||||||||||||||||| |||||||||||    
T  42445497 ttgactcggtctacgctgacgtggcaccctaagtg 42445531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 497 - 578
Target Start/End: Complemental strand, 19895825 - 19895744
Alignment:
Q  497 gttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttattttattttt 578  Q
    ||||| ||||||||  | |||||||| ||||| || ||||||||  ||||||||||| | |||||| ||||||||| |||||    
T  19895825 gttttagcccccaatgccaattttgattcggtttatgctgacgtagcaccctaagtgaggtgccatgtgttatttttttttt 19895744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 390 - 443
Target Start/End: Original strand, 20480077 - 20480130
Alignment:
Q  390 ggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccc 443  Q
    |||||||| ||| |||| |||||||| |||||| |||||||| |||||||||||    
T  20480077 ggcttaattgcacttttggccccctatatttttaaaagttgcaattttggcccc 20480130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 390 - 443
Target Start/End: Original strand, 24498106 - 24498158
Alignment:
Q  390 ggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccc 443  Q
    |||||||||||| |||||||||| ||| ||||||||||||| |||||| |||||    
T  24498106 ggcttaatagcagttttagcccc-taattttttcaaagttgtgattttagcccc 24498158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 390 - 435
Target Start/End: Complemental strand, 31827845 - 31827800
Alignment:
Q  390 ggcttaatagcaattttagccccctaaatttttcaaagttgcgatt 435  Q
    ||||||||||||||||| ||||||||| |||| | |||||||||||    
T  31827845 ggcttaatagcaattttcgccccctaacttttacgaagttgcgatt 31827800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 497 - 541
Target Start/End: Complemental strand, 14983850 - 14983806
Alignment:
Q  497 gttttggcccccaagactaattttgactcggtctacgctgacgtg 541  Q
    |||||||||||| |||  ||||||||||||||| |||||||||||    
T  14983850 gttttggccccctagatcaattttgactcggtcaacgctgacgtg 14983806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 497 - 541
Target Start/End: Original strand, 16143828 - 16143872
Alignment:
Q  497 gttttggcccccaagactaattttgactcggtctacgctgacgtg 541  Q
    |||||||||||| |||| ||||||||||||||| | |||||||||    
T  16143828 gttttggccccctagaccaattttgactcggtcaatgctgacgtg 16143872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 497 - 537
Target Start/End: Complemental strand, 21633218 - 21633178
Alignment:
Q  497 gttttggcccccaagactaattttgactcggtctacgctga 537  Q
    |||||||||||| |||| ||||||||||||||| |||||||    
T  21633218 gttttggccccctagaccaattttgactcggtcaacgctga 21633178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 497 - 541
Target Start/End: Original strand, 23048453 - 23048497
Alignment:
Q  497 gttttggcccccaagactaattttgactcggtctacgctgacgtg 541  Q
    |||||||||||| | || ||||||||||||||| |||||||||||    
T  23048453 gttttggccccctaaaccaattttgactcggtcaacgctgacgtg 23048497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 497 - 541
Target Start/End: Original strand, 23685975 - 23686019
Alignment:
Q  497 gttttggcccccaagactaattttgactcggtctacgctgacgtg 541  Q
    |||||||||||| |||  ||||||||||||||| |||||||||||    
T  23685975 gttttggccccctagatcaattttgactcggtcaacgctgacgtg 23686019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 380 - 416
Target Start/End: Original strand, 34100761 - 34100797
Alignment:
Q  380 atttataataggcttaatagcaattttagccccctaa 416  Q
    ||||| |||||||||||||||| ||||||||||||||    
T  34100761 atttaaaataggcttaatagcagttttagccccctaa 34100797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 497 - 545
Target Start/End: Complemental strand, 35921077 - 35921029
Alignment:
Q  497 gttttggcccccaagactaattttgactcggtctacgctgacgtgacac 545  Q
    ||||||||| || |||  ||||||||||||||| |||||||||||||||    
T  35921077 gttttggcctcctagatcaattttgactcggtcaacgctgacgtgacac 35921029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 390 - 438
Target Start/End: Complemental strand, 37803446 - 37803398
Alignment:
Q  390 ggcttaatagcaattttagccccctaaatttttcaaagttgcgattttg 438  Q
    ||||||||| ||||||| ||||||||| |||| | ||||||||||||||    
T  37803446 ggcttaataacaattttcgccccctaacttttacgaagttgcgattttg 37803398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 497 - 541
Target Start/End: Complemental strand, 43891569 - 43891525
Alignment:
Q  497 gttttggcccccaagactaattttgactcggtctacgctgacgtg 541  Q
    |||||||||||| |||  ||||||||||||||| |||||||||||    
T  43891569 gttttggccccctagatcaattttgactcggtcaacgctgacgtg 43891525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 68; Significance: 4e-30; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 388 - 572
Target Start/End: Complemental strand, 28786073 - 28785891
Alignment:
Q  388 taggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccctaagaagaagnnnnnnnctataaaaccgtccactaagttttgca 487  Q
    |||||||||||||| ||||| |||| ||| |||| |||||||| ||||||||||| |||||||||        ||| ||||| | ||  |||||||||||    
T  28786073 taggcttaatagcagttttaaccccataacttttccaaagttgtgattttggcccttaagaagaa--aaaaaactacaaaactgccccataagttttgca 28785976  T
Q  488 cttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttatttt 572  Q
     || |||  |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| | |||||  |||||||||    
T  28785975 tttatggcagttttgacccccaaggctaattttgactcggtctacgctgacgtgacaccctaagtgaggtgccacgtgttatttt 28785891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 386 - 578
Target Start/End: Original strand, 41243640 - 41243826
Alignment:
Q  386 aataggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccc-taagaagaagnnnnnnnctataaaaccgtccactaagtttt 484  Q
    |||||||||||||||| |||||||||||||| |||| ||||||||| ||||| ||||| |||||| ||        ||| ||||||| || |||||||||    
T  41243640 aataggcttaatagcagttttagccccctaacttttccaaagttgcaattttagccccctaagaaaaa------aactacaaaaccgccc-ctaagtttt 41243732  T
Q  485 gcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttattttattttt 578  Q
    ||| ||||||  ||||| | ||||||| | ||||||||||||||||||| ||||||| ||||||||||| | || ||| ||||||||| |||||    
T  41243733 gcatttgtggcagtttttgtccccaaggccaattttgactcggtctacgttgacgtggcaccctaagtgaggtgtcatgtgttatttttttttt 41243826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 388 - 577
Target Start/End: Complemental strand, 15107305 - 15107123
Alignment:
Q  388 taggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccc-taagaagaagnnnnnnnctataaaaccgtccactaagttttgc 486  Q
    |||||||||||||| ||||| |||||||| |||| ||||||| ||||||||||||| ||| || ||        ||| |||||||  | |||||||||||    
T  15107305 taggcttaatagcagttttacccccctaatttttccaaagttacgattttggccccctaaaaaaaa--------ctacaaaaccgctccctaagttttgc 15107214  T
Q  487 acttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttattttatttt 577  Q
    | ||||||  ||||||||| ||||  | |||||||||||||||||| |||| ||| ||||||||||| | ||||| |||||||||| ||||    
T  15107213 atttgtggcagttttggcctccaatgccaattttgactcggtctacactgatgtggcaccctaagtgaggtgccacatgttattttttttt 15107123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 393 - 553
Target Start/End: Complemental strand, 18186763 - 18186606
Alignment:
Q  393 ttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccc-taagaagaagnnnnnnnctataaaaccgtccactaagttttgcacttg 491  Q
    ||||||||| |||||||||||||| |||| ||||||| |||||||| |||| |||||| ||        ||||||||||||||  |||||||||||  ||    
T  18186763 ttaatagcagttttagccccctaacttttccaaagttacgattttgaccccctaagaaaaa----aaaactataaaaccgtcccttaagttttgcatctg 18186668  T
Q  492 tggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    |||  ||||||| ||||||| | ||||||||||| ||||||| ||||||| |||||||||||    
T  18186667 tggcagttttggtccccaaggccaattttgactcagtctacgttgacgtggcaccctaagtg 18186606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 388 - 578
Target Start/End: Original strand, 35250117 - 35250302
Alignment:
Q  388 taggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccct-aagaagaagnnnnnnnctataaaaccgtccactaagttttgc 486  Q
    |||||||||||| | ||||||||| |||| |||| ||||||||||||||||| |||| ||||| ||        ||||||||||| || |||||||||||    
T  35250117 taggcttaatagtagttttagccctctaacttttccaaagttgcgattttggtcccttaagaaaaa------aactataaaaccgccctctaagttttgc 35250210  T
Q  487 acttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttattttattttt 578  Q
    |  | ||   ||||||| ||||||| | |||||||||||||||||| |||||||| |||| |||||| | |||||  ||||||||| |||||    
T  35250211 atctttgacagttttggaccccaaggccaattttgactcggtctacactgacgtggcaccttaagtgaggtgccacgtgttatttttttttt 35250302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 389 - 537
Target Start/End: Original strand, 28350115 - 28350259
Alignment:
Q  389 aggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccc-taagaagaagnnnnnnnctataaaaccgtccactaagttttgca 487  Q
    ||||||||||||| |||||||||||||| |||  | ||||| ||||||||||||| |||||| ||        ||| ||||||| || |||||||||||     
T  28350115 aggcttaatagcagttttagccccctaactttcacgaagttacgattttggccccctaagaaaaa-----aaactacaaaaccgccccctaagttttgcc 28350209  T
Q  488 cttgtggtggttttggcccccaagactaattttgactcggtctacgctga 537  Q
    | |||||  ||||||||||||||||| |||||||||||| ||||||||||    
T  28350210 cctgtggcagttttggcccccaagaccaattttgactcgatctacgctga 28350259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 465 - 550
Target Start/End: Complemental strand, 36580518 - 36580433
Alignment:
Q  465 aaaaccgtccactaagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaa 550  Q
    ||||||| || |||||||||||| ||||||  ||||||||||||||    ||||||||||||||||||||||||||| ||||||||    
T  36580518 aaaaccgccccctaagttttgcatttgtggcagttttggcccccaaagtcaattttgactcggtctacgctgacgtggcaccctaa 36580433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 389 - 578
Target Start/End: Original strand, 15347953 - 15348134
Alignment:
Q  389 aggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccctaagaagaagnnnnnnnctataaaaccgtccactaagttttgcac 488  Q
    ||||||||||||  |||||||||||||| |||   ||||||||||||||| |||||||||| ||        ||| ||||||  || ||||||||||||     
T  15347953 aggcttaatagccgttttagccccctaactttcctaaagttgcgattttgacccctaagaaaaa-------actacaaaaccaccc-ctaagttttgcat 15348044  T
Q  489 ttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttattttattttt 578  Q
     |||||  ||| |||||||||||   ||||||||||||||||||||||| ||| ||||||||||| | | ||| |||||| ||| |||||    
T  15348045 ctgtggaagttatggcccccaaggtcaattttgactcggtctacgctgatgtggcaccctaagtgaggttccacatgttaatttcttttt 15348134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 476 - 572
Target Start/End: Original strand, 36903344 - 36903440
Alignment:
Q  476 ctaagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttatttt 572  Q
    ||||||||| ||  |||||  |||||||||| |||| | |||||||||||||||||||||||| || ||||||||||| | ||||| ||||||||||    
T  36903344 ctaagttttccatctgtggcagttttggccctcaaggccaattttgactcggtctacgctgacatggcaccctaagtgaggtgccacatgttatttt 36903440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 481 - 550
Target Start/End: Original strand, 23826106 - 23826175
Alignment:
Q  481 ttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaa 550  Q
    ||||||| ||||||  ||||||||||||||||  |||||||| |||||||||||||||||||| ||||||    
T  23826106 ttttgcatttgtggcagttttggcccccaagatcaattttgattcggtctacgctgacgtgacgccctaa 23826175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 465 - 553
Target Start/End: Original strand, 18504314 - 18504402
Alignment:
Q  465 aaaaccgtccactaagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    ||||||| || ||||||||||||  |||||  ||||||||| | ||| | ||||||||||| ||||||||||||||| |||||||||||    
T  18504314 aaaaccgccccctaagttttgcatatgtggcagttttggcctctaaggccaattttgactcagtctacgctgacgtggcaccctaagtg 18504402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 388 - 578
Target Start/End: Original strand, 4049704 - 4049893
Alignment:
Q  388 taggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccctaagaagaagnnnnnnnctataaaaccgtccactaagt-tttgc 486  Q
    |||| |||| |||| ||||||||| |||| ||||  ||||||||||||||||||||| |  ||||        ||| |||||||| | |||||| |||||    
T  4049704 taggtttaacagcagttttagcccactaacttttctaaagttgcgattttggcccctta--agaaaaaaaaaactacaaaaccgttccctaagtctttgc 4049801  T
Q  487 acttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttattttattttt 578  Q
    |  |||||  |||||| ||| |||| | |||||||||||| |||||||||||||| ||||||||||| | |||||  |||| |||| |||||    
T  4049802 atctgtggcagttttgaccctcaaggccaattttgactcgatctacgctgacgtggcaccctaagtgaggtgccacgtgttttttttttttt 4049893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 465 - 572
Target Start/End: Original strand, 15029132 - 15029238
Alignment:
Q  465 aaaaccgtccactaagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatat 564  Q
    ||||||| || ||||||||||||| |||||  |||||||||||||||   ||||||||||| ||| | |||||||||||||| ||||||  ||||||  |    
T  15029132 aaaaccgccccctaagttttgcacatgtggcagttttggcccccaaggtcaattttgactc-gtccatgctgacgtgacaccttaagtgaaatgccacgt 15029230  T
Q  565 gttatttt 572  Q
    ||||||||    
T  15029231 gttatttt 15029238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 391 - 578
Target Start/End: Original strand, 28472391 - 28472571
Alignment:
Q  391 gcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccc-taagaagaagnnnnnnnctataaaaccgtccactaagttttgcact 489  Q
    ||||||||||| |||||||||| ||| |||| |||||||||||||||| |||| |||||| ||        ||| |||| || ||  ||||||||||       
T  28472391 gcttaatagcagttttagcccc-taacttttccaaagttgcgattttgaccccctaagaaaaa-------actacaaaatcgccctataagttttgctta 28472482  T
Q  490 tgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttattttattttt 578  Q
    |||||  ||||| ||||||||||| |||||||| |||||||||| |||||||||||||| | || | ||||| ||||| |||| |||||    
T  28472483 tgtggcagttttcgcccccaagaccaattttgattcggtctacgttgacgtgacaccctgaatgaggtgccacatgttttttttttttt 28472571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 465 - 572
Target Start/End: Complemental strand, 29834394 - 29834287
Alignment:
Q  465 aaaaccgtccactaagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatat 564  Q
    ||||||| || ||||||||||||| ||||    ||||  ||||||||   ||||| ||||||||| ||||||||||||||||||||||| | ||||| ||    
T  29834394 aaaaccgccccctaagttttgcacctgtgacaattttctcccccaaggtcaatttagactcggtccacgctgacgtgacaccctaagtgaggtgccacat 29834295  T
Q  565 gttatttt 572  Q
    ||||||||    
T  29834294 gttatttt 29834287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 388 - 449
Target Start/End: Complemental strand, 6792112 - 6792050
Alignment:
Q  388 taggcttaatagcaattttagccccctaaatttttcaaagttgcgattttgg-cccctaagaa 449  Q
    |||| ||||||||| |||||||||||||| |||| ||||||||||||||||| ||||||||||    
T  6792112 taggtttaatagcagttttagccccctaacttttccaaagttgcgattttggtcccctaagaa 6792050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 393 - 534
Target Start/End: Complemental strand, 9500213 - 9500075
Alignment:
Q  393 ttaatagcaattttagccccctaaatttttcaaagttgcgattttgg-cccctaagaagaagnnnnnnnctataaaaccgtccactaagttttgcacttg 491  Q
    ||||||||| |||||||||||||| |||    ||||||||||||||| |||||||||| ||        ||| ||||||| || ||||||||||  ||||    
T  9500213 ttaatagcagttttagccccctaagtttcaagaagttgcgattttggtcccctaagaaaaa----aaaactacaaaaccgccccctaagttttgaccttg 9500118  T
Q  492 tggtggttttggcccccaagactaattttgactcggtctacgc 534  Q
    |||| ||||||||||||||| | |||||||||| |||| ||||    
T  9500117 tggtagttttggcccccaaggccaattttgacttggtcaacgc 9500075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 394 - 443
Target Start/End: Complemental strand, 21505927 - 21505878
Alignment:
Q  394 taatagcaattttagccccctaaatttttcaaagttgcgattttggcccc 443  Q
    |||||||| |||||| ||||||| ||||||||||||||||||||||||||    
T  21505927 taatagcagttttagtcccctaactttttcaaagttgcgattttggcccc 21505878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 477 - 553
Target Start/End: Original strand, 8073957 - 8074033
Alignment:
Q  477 taagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    |||||||||||  |||||  ||||||||||||||| | |||||||| ||||||| |||||||||| ||| |||||||    
T  8073957 taagttttgcatatgtggcagttttggcccccaaggccaattttgattcggtcttcgctgacgtggcactctaagtg 8074033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 386 - 442
Target Start/End: Complemental strand, 17932044 - 17931988
Alignment:
Q  386 aataggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggccc 442  Q
    |||||||||||||||| |||||||| ||| | |||| ||||||||||||||||||||    
T  17932044 aataggcttaatagcagttttagcctcctcacttttccaaagttgcgattttggccc 17931988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 390 - 442
Target Start/End: Complemental strand, 36903581 - 36903529
Alignment:
Q  390 ggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggccc 442  Q
    |||||||||||| ||||| |||||||| |||||||| ||||||||||||||||    
T  36903581 ggcttaatagcagttttaaccccctaactttttcaatgttgcgattttggccc 36903529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 508 - 572
Target Start/End: Complemental strand, 44312943 - 44312879
Alignment:
Q  508 caagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttatttt 572  Q
    |||||| ||||||||||||||||| |||||| || ||||||||||| | ||||| ||||||||||    
T  44312943 caagaccaattttgactcggtctatgctgacatgtcaccctaagtgaggtgccacatgttatttt 44312879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 379 - 551
Target Start/End: Complemental strand, 14247625 - 14247462
Alignment:
Q  379 tatttataataggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccctaagaagaagnnnnnnnctataaaaccgtccacta 478  Q
    |||||||  |||||||||||||| ||||| |||| ||| |||| |||||||||||||| | ||||| | || ||        ||| |||||||||| |||    
T  14247625 tatttattttaggcttaatagcagttttatcccc-taacttttccaaagttgcgatttcgaccccttaaaaaaa--------ctacaaaaccgtccgcta 14247535  T
Q  479 agttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaag 551  Q
    |||||||||| |||||  ||||||||  ||||  | |||||| ||||| |||||||||| ||| |||||||||    
T  14247534 agttttgcacatgtggcagttttggcatccaaagccaattttaactcgatctacgctgatgtggcaccctaag 14247462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 388 - 443
Target Start/End: Original strand, 20505096 - 20505151
Alignment:
Q  388 taggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccc 443  Q
    |||| ||||||||| |||||||||||||| ||| |||||||||||| |||||||||    
T  20505096 taggtttaatagcagttttagccccctaactttctcaaagttgcgactttggcccc 20505151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 476 - 546
Target Start/End: Complemental strand, 28350376 - 28350307
Alignment:
Q  476 ctaagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacacc 546  Q
    ||||||||||||| |||||  ||||||||||| ||| | ||||||||||| ||||||||| ||||||||||    
T  28350376 ctaagttttgcacctgtggcagttttggcccc-aaggccaattttgactctgtctacgctaacgtgacacc 28350307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 465 - 546
Target Start/End: Original strand, 3381933 - 3382013
Alignment:
Q  465 aaaaccgtccactaagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacacc 546  Q
    ||||||| || ||||||||||||  |||||  ||||||||||| |||  ||||||||||||||| |||||||| ||||||||    
T  3381933 aaaaccgccccctaagttttgcatatgtggcagttttggcccc-aaggttaattttgactcggtgtacgctgatgtgacacc 3382013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 476 - 553
Target Start/End: Complemental strand, 6726486 - 6726410
Alignment:
Q  476 ctaagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    ||||||||||||| |||||  |||||| |||| | ||| ||||||||||| || |||||||||||| |||||||||||    
T  6726486 ctaagttttgcacatgtggcagttttgcccccaaggac-aattttgactcagtttacgctgacgtggcaccctaagtg 6726410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 388 - 449
Target Start/End: Complemental strand, 19645117 - 19645056
Alignment:
Q  388 taggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccctaagaa 449  Q
    |||| |||||||||||||| ||||| ||| |||  | |||||||||||||||||||||||||    
T  19645117 taggtttaatagcaattttcgccccttaactttcacgaagttgcgattttggcccctaagaa 19645056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 388 - 537
Target Start/End: Original strand, 20184914 - 20185060
Alignment:
Q  388 taggcttaatagcaattttagccccctaaatttttcaaagttgcgatttt-ggcccctaagaagaagnnnnnnnctataaaaccgtccactaagttttgc 486  Q
    ||||||||||| || ||||||| |||||| |||| ||||||||||||||| | |||||||||| ||        ||| ||||||| |   ||||||||||    
T  20184914 taggcttaataacagttttagctccctaacttttccaaagttgcgattttagccccctaagaaaaa----aaaactacaaaaccgcctcttaagttttgc 20185009  T
Q  487 acttgtggtggttttggcccccaagactaattttgactcggtctacgctga 537  Q
    |  ||||   |||||||||||||||   |||||||||||||||||||||||    
T  20185010 atatgtgccagttttggcccccaaggtcaattttgactcggtctacgctga 20185060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 385 - 453
Target Start/End: Original strand, 45697482 - 45697551
Alignment:
Q  385 taataggcttaatagcaattttagccccctaaatttttcaaagttgcgattttgg-cccctaagaagaag 453  Q
    |||||||||||||| || |||| | ||||||| ||| || ||||||||||||||| ||||||||||||||    
T  45697482 taataggcttaataacagttttcgtcccctaactttctcgaagttgcgattttggccccctaagaagaag 45697551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 476 - 572
Target Start/End: Original strand, 5172593 - 5172689
Alignment:
Q  476 ctaagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttatttt 572  Q
    ||||||||||||  |||||  ||||| || ||||| || |||| |||||||||||||| |||| |  ||||||||||| | |||||| |||||||||    
T  5172593 ctaagttttgcatctgtggcagttttagctcccaaaaccaattatgactcggtctacgttgacattgcaccctaagtgaggtgccatgtgttatttt 5172689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 517 - 553
Target Start/End: Complemental strand, 40872357 - 40872321
Alignment:
Q  517 ttttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    ||||||||||||||||||||||||| |||||||||||    
T  40872357 ttttgactcggtctacgctgacgtggcaccctaagtg 40872321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 388 - 443
Target Start/End: Original strand, 42256580 - 42256636
Alignment:
Q  388 taggcttaatagcaattttagccccc-taaatttttcaaagttgcgattttggcccc 443  Q
    |||||||||||||| ||||| ||||| ||| |||||||||||||||||||| |||||    
T  42256580 taggcttaatagcagttttaacccccctaactttttcaaagttgcgattttagcccc 42256636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 497 - 545
Target Start/End: Complemental strand, 42437927 - 42437879
Alignment:
Q  497 gttttggcccccaagactaattttgactcggtctacgctgacgtgacac 545  Q
    |||||||||||| |||| ||||||||||||||| |||||||| ||||||    
T  42437927 gttttggccccctagaccaattttgactcggtcaacgctgacatgacac 42437879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 388 - 439
Target Start/End: Original strand, 3318316 - 3318367
Alignment:
Q  388 taggcttaatagcaattttagccccctaaatttttcaaagttgcgattttgg 439  Q
    |||||||||||| | |||||||||| ||| |||| |||||||||||||||||    
T  3318316 taggcttaataggagttttagccccttaacttttccaaagttgcgattttgg 3318367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 519 - 558
Target Start/End: Complemental strand, 10312415 - 10312376
Alignment:
Q  519 ttgactcggtctacgctgacgtgacaccctaagtgggatg 558  Q
    ||||||||||| ||||||||||||||||||||||| ||||    
T  10312415 ttgactcggtcaacgctgacgtgacaccctaagtgagatg 10312376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 515 - 550
Target Start/End: Original strand, 20505191 - 20505226
Alignment:
Q  515 aattttgactcggtctacgctgacgtgacaccctaa 550  Q
    ||||||||||||||||||||||||||| ||||||||    
T  20505191 aattttgactcggtctacgctgacgtggcaccctaa 20505226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 392 - 443
Target Start/End: Original strand, 47909696 - 47909747
Alignment:
Q  392 cttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccc 443  Q
    |||||||||| |||||||||||||| |||  ||||||||||||||| |||||    
T  47909696 cttaatagcagttttagccccctaactttcccaaagttgcgattttagcccc 47909747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 389 - 447
Target Start/End: Original strand, 11373846 - 11373904
Alignment:
Q  389 aggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccctaag 447  Q
    ||||||||||||| |||| ||||||||| |||| | |||||||||| ||| ||||||||    
T  11373846 aggcttaatagcagttttcgccccctaacttttacgaagttgcgatcttgacccctaag 11373904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 476 - 546
Target Start/End: Complemental strand, 11374199 - 11374130
Alignment:
Q  476 ctaagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacacc 546  Q
    |||||||||||| ||||| | |||||||| || ||| | ||||||||| ||||||||||||||||| ||||    
T  11374199 ctaagttttgcatttgtgctagttttggcgcc-aaggccaattttgacccggtctacgctgacgtggcacc 11374130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 476 - 542
Target Start/End: Original strand, 17876251 - 17876317
Alignment:
Q  476 ctaagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtga 542  Q
    |||| |||||||  ||||| |||||||||| ||||| | |||||||||||| |||| ||||||||||    
T  17876251 ctaaattttgcatctgtggcggttttggcctccaaggccaattttgactcgatctatgctgacgtga 17876317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 519 - 553
Target Start/End: Complemental strand, 25036221 - 25036187
Alignment:
Q  519 ttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    ||||||||||| |||||||||||||||||||||||    
T  25036221 ttgactcggtcaacgctgacgtgacaccctaagtg 25036187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 497 - 547
Target Start/End: Original strand, 32043609 - 32043659
Alignment:
Q  497 gttttggcccccaagactaattttgactcggtctacgctgacgtgacaccc 547  Q
    |||||||  |||||||| |||||||||| ||||| ||||||||||||||||    
T  32043609 gttttggatcccaagaccaattttgacttggtcttcgctgacgtgacaccc 32043659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 389 - 443
Target Start/End: Original strand, 33159483 - 33159537
Alignment:
Q  389 aggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccc 443  Q
    ||||||||| ||| ||||| |||||||  ||||| ||||||||||||||||||||    
T  33159483 aggcttaattgcacttttaaccccctatctttttaaaagttgcgattttggcccc 33159537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 516 - 553
Target Start/End: Complemental strand, 21505810 - 21505773
Alignment:
Q  516 attttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    |||||||||| ||||||| |||||||||||||||||||    
T  21505810 attttgactcagtctacgttgacgtgacaccctaagtg 21505773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 452
Target Start/End: Complemental strand, 24433280 - 24433215
Alignment:
Q  388 taggcttaatagcaattttagccccctaaatttttcaaagttgcgattttgg-cccctaagaagaa 452  Q
    |||| ||||||||| | |||||| ||||| ||||||||| |||||||||||| || ||||||||||    
T  24433280 taggtttaatagcagtcttagcctcctaactttttcaaaattgcgattttggtcctctaagaagaa 24433215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 497 - 578
Target Start/End: Complemental strand, 25987133 - 25987052
Alignment:
Q  497 gttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttattttattttt 578  Q
    ||||||| ||||||| | | | ||||||||||| ||||||||||| ||||||||||| | |||||  |||| |||| |||||    
T  25987133 gttttggaccccaagtccattgttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgttttttttttttt 25987052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 390 - 446
Target Start/End: Original strand, 35793375 - 35793432
Alignment:
Q  390 ggcttaatagcaattttagccccctaaatttttcaaagttgcgatttt-ggcccctaa 446  Q
    |||||||||||| |||| ||||||||||||||   ||||||||||||| |||||||||    
T  35793375 ggcttaatagcagttttggccccctaaattttaggaagttgcgattttaggcccctaa 35793432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 446
Target Start/End: Complemental strand, 40139875 - 40139818
Alignment:
Q  389 aggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccctaa 446  Q
    ||||||||| ||| |||| ||||||||  ||| | |||||||||||||||||||||||    
T  40139875 aggcttaattgcacttttggccccctatctttctaaaagttgcgattttggcccctaa 40139818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 390 - 438
Target Start/End: Complemental strand, 10097839 - 10097791
Alignment:
Q  390 ggcttaatagcaattttagccccctaaatttttcaaagttgcgattttg 438  Q
    |||||||||||||||||||||   ||| ||| |||||||||||||||||    
T  10097839 ggcttaatagcaattttagccatttaactttctcaaagttgcgattttg 10097791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 497 - 553
Target Start/End: Original strand, 19644905 - 19644961
Alignment:
Q  497 gttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    ||||||||| ||||||| |||||| || | ||||||||||||||| |||| ||||||    
T  19644905 gttttggcctccaagaccaattttaacccagtctacgctgacgtggcaccgtaagtg 19644961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 388 - 444
Target Start/End: Complemental strand, 23826338 - 23826282
Alignment:
Q  388 taggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccct 444  Q
    |||||||||||||| |||| | ||||||| |||  | ||||||||||||||||||||    
T  23826338 taggcttaatagcagtttttgtcccctaactttcacgaagttgcgattttggcccct 23826282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 497 - 545
Target Start/End: Original strand, 26974393 - 26974441
Alignment:
Q  497 gttttggcccccaagactaattttgactcggtctacgctgacgtgacac 545  Q
    |||||||||||  |||| |||||||||||| || |||||||||||||||    
T  26974393 gttttggccccttagacaaattttgactcgatcaacgctgacgtgacac 26974441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 497 - 545
Target Start/End: Original strand, 30503810 - 30503858
Alignment:
Q  497 gttttggcccccaagactaattttgactcggtctacgctgacgtgacac 545  Q
    |||||||||||| | || |||||||||||| || |||||||||||||||    
T  30503810 gttttggccccctaaaccaattttgactcgatcaacgctgacgtgacac 30503858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 66; Significance: 7e-29; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 391 - 553
Target Start/End: Original strand, 19915 - 20072
Alignment:
Q  391 gcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccctaagaagaagnnnnnnnctataaaaccgtccactaagttttgcactt 490  Q
    ||||||||||| ||||| |||||||||||||| ||||||| |||||||||||||||||| ||        ||| |||| ||||||||||||||||||  |    
T  19915 gcttaatagcagttttaaccccctaaattttttaaagttgtgattttggcccctaagaaaaa-----aaactacaaaatcgtccactaagttttgcatct 20009  T
Q  491 gtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    ||||  ||||||||||||||  | |||||||||||| |||||||| ||||| |||||||||||    
T  20010 gtggcagttttggcccccaaagccaattttgactcgatctacgctaacgtggcaccctaagtg 20072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 4e-27; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 388 - 578
Target Start/End: Complemental strand, 10727510 - 10727324
Alignment:
Q  388 taggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccc-taagaagaagnnnnnnnctataaaaccgtccactaagttttgc 486  Q
    ||||| |||||||| |||||||||||||| |||| |||||||| |||||||||||| |||||| ||        ||| ||||||| || |||||||||||    
T  10727510 taggcataatagcagttttagccccctaacttttccaaagttgtgattttggccccctaagaaaaa-----aaactacaaaaccgccccctaagttttgc 10727416  T
Q  487 acttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttattttattttt 578  Q
    |  |||||  ||||||||||||||| | |||||||||| | ||||||||||||||  |||||||||| ||||||| ||||| |||| |||||    
T  10727415 atctgtggcagttttggcccccaaggccaattttgacttgatctacgctgacgtgggaccctaagtgagatgccacatgttttttttttttt 10727324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 389 - 572
Target Start/End: Original strand, 30349348 - 30349526
Alignment:
Q  389 aggcttaatagcaattttagccccctaaatttttcaaagttgcgattttg-gcccctaagaagaagnnnnnnnctataaaaccgtccactaagttttgca 487  Q
    ||||||||||||| ||||||||| |||| |||  |||||||||||||||| ||||||||||| ||        ||| ||||||| ||  |||||||||||    
T  30349348 aggcttaatagcagttttagccctctaactttcccaaagttgcgattttgagcccctaagaaaaa------aactacaaaaccgccccttaagttttgca 30349441  T
Q  488 cttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttatttt 572  Q
      |||||| |||||| |||||||| | |||| |||||||||||||| ||||||| ||||||||||| | ||||| ||||||||||    
T  30349442 tctgtggtagttttgacccccaaggccaattatgactcggtctacgttgacgtggcaccctaagtgaggtgccacatgttatttt 30349526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 386 - 553
Target Start/End: Original strand, 33399782 - 33399943
Alignment:
Q  386 aataggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggccc-ctaagaagaagnnnnnnnctataaaaccgtccactaagtttt 484  Q
    |||||||||||||||| |||||||||| ||| |||| |||||||||||||||||||| ||||||| ||        ||| |||||||  | |||||||||    
T  33399782 aataggcttaatagcagttttagcccc-taacttttccaaagttgcgattttggccctctaagaaaaa------aactacaaaaccggaccctaagtttt 33399874  T
Q  485 gcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtg 553  Q
     || ||||||  ||||||||||| |||   ||||||||||||||||||||||||||| |||||||||||    
T  33399875 acatttgtggcagttttggcccctaaggtcaattttgactcggtctacgctgacgtggcaccctaagtg 33399943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 389 - 551
Target Start/End: Complemental strand, 2841127 - 2840965
Alignment:
Q  389 aggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccctaagaagaagnnnnnnnctataaaaccgtccactaagttttgcac 488  Q
    ||||||||||||| |||||| ||||||| ||||||||| ||||| ||||  | |||||||||||        ||| ||||| ||||  |||||||||||     
T  2841127 aggcttaatagcagttttagacccctaactttttcaaaattgcgcttttacctcctaagaagaaaaaaaaaactacaaaacagtcccataagttttgcat 2841028  T
Q  489 ttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaag 551  Q
    ||||||  |||||||||| ||| || |||||||||||| |||||| ||||||| |||||||||    
T  2841027 ttgtggcagttttggcccgcaaaaccaattttgactcgctctacgttgacgtggcaccctaag 2840965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 391 - 569
Target Start/End: Complemental strand, 6036971 - 6036799
Alignment:
Q  391 gcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcc-cctaagaagaagnnnnnnnctataaaaccgtccactaagttttgcact 489  Q
    ||||||||||| |||||||||| ||| ||||  |||||||||||||||||| |||||||||||        ||| ||||| |||| ||||||||||||      
T  6036971 gcttaatagcagttttagcccc-taacttttctaaagttgcgattttggcctcctaagaagaa------aactacaaaactgtcccctaagttttgcata 6036879  T
Q  490 tgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttat 569  Q
    |||||  |||||| |||||||  | |||||||||| ||| || ||||||||||||||||||||| | ||||| |||||||    
T  6036878 tgtggcagttttgacccccaaagccaattttgacttggtttatgctgacgtgacaccctaagtgaggtgccacatgttat 6036799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 477 - 571
Target Start/End: Original strand, 32143341 - 32143435
Alignment:
Q  477 taagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttattt 571  Q
    |||||||||||| |||||  ||||||||||||||||| ||||||||||||||||||| ||| ||| ||| ||||||| | || || |||||||||    
T  32143341 taagttttgcacctgtggcagttttggcccccaagaccaattttgactcggtctacgttgatgtggcactctaagtgaggtggcacatgttattt 32143435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 477 - 578
Target Start/End: Complemental strand, 266342 - 266242
Alignment:
Q  477 taagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttattttattt 576  Q
    |||||||||||| |||||  ||||||||||| || || |||||||| ||||||||||||||||||||| |||||||| | || ||  |||||||||||||    
T  266342 taagttttgcacctgtggcagttttggccccaaa-accaattttgattcggtctacgctgacgtgacatcctaagtgaggtgtcacgtgttattttattt 266244  T
Q  577 tt 578  Q
    ||    
T  266243 tt 266242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 476 - 572
Target Start/End: Original strand, 3812822 - 3812917
Alignment:
Q  476 ctaagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttatttt 572  Q
    ||||||||||||  |||||  ||||||||||| ||||| ||||||||| ||||||||||||||||| ||||||||||| | ||| || |||||||||    
T  3812822 ctaagttttgcatatgtggcagttttggcccc-aagaccaattttgacccggtctacgctgacgtggcaccctaagtgaggtgctatgtgttatttt 3812917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 465 - 553
Target Start/End: Complemental strand, 18031185 - 18031097
Alignment:
Q  465 aaaaccgtccactaagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    ||||||||||  ||||||||| | ||||| | |||||||||| |||||  |||||||||| |||||||||||||||| |||||||||||    
T  18031185 aaaaccgtcccttaagttttgtatttgtgatagttttggccctcaagatcaattttgacttggtctacgctgacgtggcaccctaagtg 18031097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 393 - 553
Target Start/End: Complemental strand, 239256 - 239100
Alignment:
Q  393 ttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccctaagaagaagnnnnnnnctataaaaccgtccac--taagttttgcactt 490  Q
    ||||||||| ||||| |||||||| ||| ||||||||||||||| | |||||||||| ||        ||| |||| ||||| |  ||||||| |||| |    
T  239256 ttaatagcagttttaaccccctaactttctcaaagttgcgatttggtcccctaagaaaaa------aactacaaaatcgtcccccataagtttagcacct 239163  T
Q  491 gtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    || |  |||||||| |||||| | |||||||| |||||||||||||||||| |||||||||||    
T  239162 gttgcagttttggcacccaaggccaattttgattcggtctacgctgacgtggcaccctaagtg 239100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 386 - 443
Target Start/End: Complemental strand, 30349674 - 30349617
Alignment:
Q  386 aataggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccc 443  Q
    |||||||||||||||| |||| | ||||||| ||||||||||||||||||||||||||    
T  30349674 aataggcttaatagcagtttttgtcccctaactttttcaaagttgcgattttggcccc 30349617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 476 - 572
Target Start/End: Complemental strand, 5003311 - 5003215
Alignment:
Q  476 ctaagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttatttt 572  Q
    |||||||||||| ||||||  |||||||| |||||    |||||| ||| |||||||||||||||||||||||||||| | || || ||||||||||    
T  5003311 ctaagttttgcaattgtggcagttttggctcccaatgtcaattttaacttggtctacgctgacgtgacaccctaagtgaggtgtcacatgttatttt 5003215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 394 - 438
Target Start/End: Complemental strand, 20475014 - 20474970
Alignment:
Q  394 taatagcaattttagccccctaaatttttcaaagttgcgattttg 438  Q
    ||||||||||||||||||||||| |||||||||||||||||||||    
T  20475014 taatagcaattttagccccctaactttttcaaagttgcgattttg 20474970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 477 - 553
Target Start/End: Complemental strand, 26311635 - 26311559
Alignment:
Q  477 taagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    |||||||||||  |||||  |||||||||||||||   ||||||||||||||||||||||||||| || ||||||||    
T  26311635 taagttttgcatatgtggcagttttggcccccaaggtcaattttgactcggtctacgctgacgtggcatcctaagtg 26311559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 388 - 541
Target Start/End: Complemental strand, 2853732 - 2853582
Alignment:
Q  388 taggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccc--taagaagaagnnnnnnnctataaaaccgtccactaagttttg 485  Q
    |||||||||||||| ||||| || ||||| ||| |||||||||| |||||||||||  |||||| ||        ||| ||||||| || |||||||||     
T  2853732 taggcttaatagcagttttaacctcctaactttctcaaagttgcaattttggcccccctaagaaaaa-----aaactacaaaaccgccccctaagttttt 2853638  T
Q  486 cacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtg 541  Q
    ||  |||||  ||||||||||||||| | |||||||||||  ||||||||||||||    
T  2853637 catatgtggcagttttggcccccaaggccaattttgactcattctacgctgacgtg 2853582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 388 - 441
Target Start/End: Original strand, 2203185 - 2203238
Alignment:
Q  388 taggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcc 441  Q
    |||||||||||||||||||||| |||||| |||  |||||||||||||||||||    
T  2203185 taggcttaatagcaattttagctccctaactttcccaaagttgcgattttggcc 2203238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 476 - 572
Target Start/End: Original strand, 1377289 - 1377385
Alignment:
Q  476 ctaagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttatttt 572  Q
    |||| ||||||| ||||||  |||||||||| |||| || |||||||||||||||| ||||| ||  ||||||||||| | ||||| |||| |||||    
T  1377289 ctaaattttgcatttgtggctgttttggccctcaaggcttattttgactcggtctatgctgatgtcgcaccctaagtgaggtgccacatgtcatttt 1377385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 476 - 572
Target Start/End: Original strand, 1385037 - 1385133
Alignment:
Q  476 ctaagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttatttt 572  Q
    |||| ||||||| ||||||  |||||||||| |||| || |||||||||||||||| ||||| ||  ||||||||||| | ||||| |||| |||||    
T  1385037 ctaaattttgcatttgtggctgttttggccctcaaggcttattttgactcggtctatgctgatgtcgcaccctaagtgaggtgccacatgtcatttt 1385133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 466 - 553
Target Start/End: Original strand, 11351707 - 11351794
Alignment:
Q  466 aaaccgtccactaagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    ||||||||||| ||||||| ||  | |||  ||||| | ||||||  | ||||||||||||||||||||||||||| |||||||||||    
T  11351707 aaaccgtccacaaagttttacatatatggcagttttcgtccccaatgccaattttgactcggtctacgctgacgtggcaccctaagtg 11351794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 394 - 578
Target Start/End: Original strand, 17532254 - 17532434
Alignment:
Q  394 taatagcaattttagccccctaaatttttcaaagttgcgattttggcccctaagaagaagnnnnnnnctataaaaccgtccactaagttttgcacttgtg 493  Q
    |||||||| |||||||||||||| |||  |||||||||||||| |  | ||||||| ||        ||| ||||||| ||  |||||||||||| ||||    
T  17532254 taatagcatttttagccccctaactttcccaaagttgcgatttggctctctaagaaaaa---aaaaactacaaaaccgccccttaagttttgcacctgtg 17532350  T
Q  494 gtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttattttattttt 578  Q
    |  ||||||||||| ||  | | ||||||||||||||||| |||| || ||||| ||||| | ||||| |||||||||| |||||    
T  17532351 gcagttttggcccctaaagccagttttgactcggtctacgatgacatggcaccc-aagtgaggtgccacatgttatttttttttt 17532434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 386 - 537
Target Start/End: Original strand, 26601457 - 26601603
Alignment:
Q  386 aataggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccctaagaagaagnnnnnnnctataaaaccgtccactaagttttg 485  Q
    |||||| |||||| || ||||| | || ||| ||||| |||||||||||||||||||||||||| ||         || ||||||  || ||||||||||    
T  26601457 aataggtttaataacagttttatctccttaacttttttaaagttgcgattttggcccctaagaaaaa-----aaattacaaaaccaccccctaagttttg 26601551  T
Q  486 cacttgtggtggttttggcccccaagactaattttgactcggtctacgctga 537  Q
    ||  ||||   | ||||| ||||||||| |||||||||||||||||||||||    
T  26601552 catctgtgacagctttggtccccaagaccaattttgactcggtctacgctga 26601603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 390 - 438
Target Start/End: Original strand, 17248636 - 17248684
Alignment:
Q  390 ggcttaatagcaattttagccccctaaatttttcaaagttgcgattttg 438  Q
    |||||||||||| |||||||| ||||| ||||| |||||||||||||||    
T  17248636 ggcttaatagcagttttagcctcctaacttttttaaagttgcgattttg 17248684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 497 - 553
Target Start/End: Original strand, 17248739 - 17248795
Alignment:
Q  497 gttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    ||||||||||  ||||| |||||||| |||||||||| ||||||| |||||||||||    
T  17248739 gttttggcccttaagaccaattttgattcggtctacgttgacgtggcaccctaagtg 17248795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 390 - 449
Target Start/End: Original strand, 266122 - 266181
Alignment:
Q  390 ggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccctaagaa 449  Q
    |||||||||||| ||||||||||| || |||  ||||| ||| |||||||||||||||||    
T  266122 ggcttaatagcagttttagcccccaaactttcccaaagctgcaattttggcccctaagaa 266181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 517 - 552
Target Start/End: Original strand, 2203286 - 2203321
Alignment:
Q  517 ttttgactcggtctacgctgacgtgacaccctaagt 552  Q
    ||||||||||||||||||||||||| ||||||||||    
T  2203286 ttttgactcggtctacgctgacgtggcaccctaagt 2203321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 492 - 547
Target Start/End: Complemental strand, 4037419 - 4037364
Alignment:
Q  492 tggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccc 547  Q
    |||| |||||||||| |||||| |||||||||| ||||  ||||||||||||||||    
T  4037419 tggtagttttggccctcaagaccaattttgacttggtcgtcgctgacgtgacaccc 4037364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 503 - 545
Target Start/End: Original strand, 22516110 - 22516152
Alignment:
Q  503 gcccccaagactaattttgactcggtctacgctgacgtgacac 545  Q
    |||||| | |||||||||||||||||| |||||||||||||||    
T  22516110 gccccctaaactaattttgactcggtcaacgctgacgtgacac 22516152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 497 - 543
Target Start/End: Complemental strand, 29874414 - 29874368
Alignment:
Q  497 gttttggcccccaagactaattttgactcggtctacgctgacgtgac 543  Q
    |||||||||||| |||| ||||||||||||||| | |||||||||||    
T  29874414 gttttggccccctagaccaattttgactcggtcaatgctgacgtgac 29874368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 380 - 438
Target Start/End: Original strand, 32143248 - 32143305
Alignment:
Q  380 atttataataggcttaatagcaattttagccccctaaatttttcaaagttgcgattttg 438  Q
    |||||| ||||| |||||||||  ||||||||| ||| |||||||||||||||||||||    
T  32143248 atttattataggtttaatagcagatttagcccc-taactttttcaaagttgcgattttg 32143305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 497 - 562
Target Start/End: Complemental strand, 15711846 - 15711781
Alignment:
Q  497 gttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccat 562  Q
    ||||||| |||| || ||| | ||||||||||| ||||||||||| ||||||||||| | ||||||    
T  15711846 gttttggacccccagtctattgttgactcggtcaacgctgacgtggcaccctaagtgaggtgccat 15711781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 497 - 541
Target Start/End: Original strand, 2017275 - 2017319
Alignment:
Q  497 gttttggcccccaagactaattttgactcggtctacgctgacgtg 541  Q
    |||||||||||| |||| ||||||||||| ||| |||||||||||    
T  2017275 gttttggccccctagaccaattttgactcagtcaacgctgacgtg 2017319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 497 - 541
Target Start/End: Complemental strand, 2018408 - 2018364
Alignment:
Q  497 gttttggcccccaagactaattttgactcggtctacgctgacgtg 541  Q
    ||||||| |||| |||| ||||||||||||||| |||||||||||    
T  2018408 gttttggtcccctagaccaattttgactcggtcaacgctgacgtg 2018364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 497 - 541
Target Start/End: Complemental strand, 11624259 - 11624215
Alignment:
Q  497 gttttggcccccaagactaattttgactcggtctacgctgacgtg 541  Q
    |||||||||||| |||  ||||||||||||||| |||||||||||    
T  11624259 gttttggccccctagatcaattttgactcggtcaacgctgacgtg 11624215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 517 - 553
Target Start/End: Original strand, 16735690 - 16735726
Alignment:
Q  517 ttttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    ||||||||||||| ||||||||||| |||||||||||    
T  16735690 ttttgactcggtcaacgctgacgtggcaccctaagtg 16735726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 517 - 553
Target Start/End: Complemental strand, 27771404 - 27771368
Alignment:
Q  517 ttttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    ||||||||||||| ||||||||||| |||||||||||    
T  27771404 ttttgactcggtcaacgctgacgtggcaccctaagtg 27771368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 497 - 541
Target Start/End: Original strand, 29873202 - 29873246
Alignment:
Q  497 gttttggcccccaagactaattttgactcggtctacgctgacgtg 541  Q
    |||||||||||| |||| |||||||||| |||| |||||||||||    
T  29873202 gttttggccccctagaccaattttgacttggtcaacgctgacgtg 29873246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0578 (Bit Score: 56; Significance: 6e-23; HSPs: 1)
Name: scaffold0578
Description:

Target: scaffold0578; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 462 - 561
Target Start/End: Original strand, 3143 - 3242
Alignment:
Q  462 tataaaaccgtccactaagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgcca 561  Q
    ||||||||||||| |||||||||||| ||||||   ||||||||| ||||   ||||||||||||||||||||||||||| ||||||||||| |||||||    
T  3143 tataaaaccgtcctctaagttttgcatttgtggcaattttggccctcaaggtcaattttgactcggtctacgctgacgtggcaccctaagtgagatgcca 3242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0248 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: scaffold0248
Description:

Target: scaffold0248; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 393 - 577
Target Start/End: Original strand, 405 - 586
Alignment:
Q  393 ttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccc-taagaagaagnnnnnnnctataaaaccgtccactaagttttgcacttg 491  Q
    |||||||||  ||||||||||||| ||  |||||||||||||||||||||| |||||| ||        ||| ||||||  || ||||||||| ||  ||    
T  405 ttaatagcagctttagccccctaacttcctcaaagttgcgattttggccccctaagaaaaa----aaaactacaaaaccaccccctaagttttacatatg 500  T
Q  492 tggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttattttatttt 577  Q
    |||  ||||||||||||||||| |||||||||||||||||  |||||||| |||||||| || | || ||| ||||||||||||||    
T  501 tggcagttttggcccccaagaccaattttgactcggtctatactgacgtggcaccctaaatgaggtgtcatgtgttattttatttt 586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 482 - 553
Target Start/End: Original strand, 9425 - 9496
Alignment:
Q  482 tttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    ||||||| |||||| ||||||||||||||||  ||||||||||||||||||||||||||| || ||||||||    
T  9425 tttgcacatgtggtagttttggcccccaagatcaattttgactcggtctacgctgacgtggcatcctaagtg 9496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 393 - 544
Target Start/End: Original strand, 9415 - 9561
Alignment:
Q  393 ttaatagcaattttagccccctaaatttttcaaagttgcgattttggccc-ctaagaagaagnnnnnnnctataaaaccgtccactaagttttgcacttg 491  Q
    ||||||||| |||||||||||||| |||  |||||||| |||||| |||| ||||||| ||        ||| |||||||||| ||||||||||||  ||    
T  9415 ttaatagcagttttagccccctaattttcccaaagttgtgatttttgccctctaagaaaaa------aactacaaaaccgtcccctaagttttgcatatg 9508  T
Q  492 tggtggttttggcccccaagactaattttgactcggtctacgctgacgtgaca 544  Q
    |||  ||||| ||||||||| | ||||||||||||||||| ||||||||||||    
T  9509 tggcagttttagcccccaaggccaattttgactcggtctaggctgacgtgaca 9561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 46; Significance: 6e-17; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 465 - 538
Target Start/End: Complemental strand, 19272 - 19199
Alignment:
Q  465 aaaaccgtccactaagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgac 538  Q
    ||||||| || ||||||||||||| |||||| ||||||||||||||| | ||||||| ||||||||||||||||    
T  19272 aaaaccgccccctaagttttgcacatgtggtagttttggcccccaaggccaattttggctcggtctacgctgac 19199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 393 - 443
Target Start/End: Complemental strand, 19652 - 19602
Alignment:
Q  393 ttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccc 443  Q
    ||||||||| |||||| ||||||| ||||||||||||||||||||||||||    
T  19652 ttaatagcagttttagtcccctaactttttcaaagttgcgattttggcccc 19602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 46; Significance: 6e-17; HSPs: 2)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 476 - 553
Target Start/End: Original strand, 76944 - 77020
Alignment:
Q  476 ctaagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    |||||||||||| ||||||  |||||| |||||||| | ||||||||||||||||||||||||||| |||||||||||    
T  76944 ctaagttttgcatttgtggcagttttg-cccccaaggccaattttgactcggtctacgctgacgtggcaccctaagtg 77020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 387 - 443
Target Start/End: Complemental strand, 77178 - 77122
Alignment:
Q  387 ataggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccc 443  Q
    ||||||||||||| | ||||| || ||||| ||||| ||||||||| ||||||||||    
T  77178 ataggcttaatagtagttttaaccgcctaacttttttaaagttgcggttttggcccc 77122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0372 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 389 - 553
Target Start/End: Original strand, 123 - 281
Alignment:
Q  389 aggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggc-ccctaagaagaagnnnnnnnctataaaaccgtccactaagttttgca 487  Q
    ||||||||||||| |||||||| ||||| ||| |||||||||||||||| || |||| |||  ||        ||| |||| ||||  |||| |||||||    
T  123 aggcttaatagcagttttagcctcctaactttctcaaagttgcgatttttgctccctgagataaa------aactacaaaaacgtctcctaaattttgca 216  T
Q  488 cttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    |||||||  ||||||||| | ||| | |||||||||||||||||| ||||||||||||||||||||    
T  217 cttgtggcagttttggccac-aaggcgaattttgactcggtctacactgacgtgacaccctaagtg 281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0515 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 386 - 443
Target Start/End: Original strand, 3635 - 3692
Alignment:
Q  386 aataggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccc 443  Q
    |||||||||||||||| |||||||||||||| |||  |||||||||||||||||||||    
T  3635 aataggcttaatagcagttttagccccctaactttcccaaagttgcgattttggcccc 3692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 386 - 443
Target Start/End: Original strand, 3635 - 3692
Alignment:
Q  386 aataggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccc 443  Q
    |||||||||||||||| |||||||||||||| |||  |||||||||||||||||||||    
T  3635 aataggcttaatagcagttttagccccctaactttcccaaagttgcgattttggcccc 3692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1458 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold1458
Description:

Target: scaffold1458; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 386 - 443
Target Start/End: Original strand, 1467 - 1524
Alignment:
Q  386 aataggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccc 443  Q
    |||||||||||||||| |||||||||||||| |||  |||||||| ||||||||||||    
T  1467 aataggcttaatagcagttttagccccctaactttcacaaagttgagattttggcccc 1524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 465 - 578
Target Start/End: Complemental strand, 25142 - 25030
Alignment:
Q  465 aaaaccgtccactaagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatat 564  Q
    ||||||| || ||||||||||||  || ||| ||||||||||| || || |||||||||||| ||| |||||||||| ||| ||||||| | |||||| |    
T  25142 aaaaccgccccctaagttttgcatatgcggtagttttggccccaaa-accaattttgactcgatcttcgctgacgtggcactctaagtgaggtgccatgt 25044  T
Q  565 gttattttattttt 578  Q
    ||| |||| |||||    
T  25043 gttttttttttttt 25030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 391 - 553
Target Start/End: Original strand, 21659 - 21815
Alignment:
Q  391 gcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccctaagaagaagnnnnnnnctataaaaccgtccactaagttttgcactt 490  Q
    ||||||||| | |||||||| ||||| ||||| ||||||||||||||| || ||||||| ||        ||| |||||||||  |||||||||||   |    
T  21659 gcttaatagtagttttagcctcctaacttttttaaagttgcgattttgtccactaagaaaaa-----aaactacaaaaccgtct-ctaagttttgcctct 21752  T
Q  491 gtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtg 553  Q
     |||  |||||||  ||||| || ||||||||||||||||||||||||||| ||||| |||||    
T  21753 atggcagttttggttcccaaaaccaattttgactcggtctacgctgacgtggcaccccaagtg 21815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 476 - 553
Target Start/End: Complemental strand, 46307 - 46230
Alignment:
Q  476 ctaagttttgcacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    ||||||||||||  ||||   |||||||||||||||   ||||||||||| ||||||||||||||| |||||||||||    
T  46307 ctaagttttgcatctgtgacagttttggcccccaaggtcaattttgactcagtctacgctgacgtggcaccctaagtg 46230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 497 - 572
Target Start/End: Original strand, 145456 - 145531
Alignment:
Q  497 gttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgccatatgttatttt 572  Q
    ||||||||||||||| | ||||||||||||||||| |||||| ||  |||||||||| | |||||  |||||||||    
T  145456 gttttggcccccaaggccaattttgactcggtctaggctgacatggaaccctaagtgaggtgccacgtgttatttt 145531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 517 - 553
Target Start/End: Original strand, 93925 - 93961
Alignment:
Q  517 ttttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    ||||||||||||||||||||||||| |||||||||||    
T  93925 ttttgactcggtctacgctgacgtggcaccctaagtg 93961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 497 - 541
Target Start/End: Original strand, 199771 - 199815
Alignment:
Q  497 gttttggcccccaagactaattttgactcggtctacgctgacgtg 541  Q
    |||||||||||| |||| ||||||||||||||| |||||||||||    
T  199771 gttttggccccctagaccaattttgactcggtcaacgctgacgtg 199815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 497 - 545
Target Start/End: Complemental strand, 201144 - 201096
Alignment:
Q  497 gttttggcccccaagactaattttgactcggtctacgctgacgtgacac 545  Q
    |||||||||||| || | |||||| |||||||| |||||||||||||||    
T  201144 gttttggccccctagcccaattttaactcggtcaacgctgacgtgacac 201096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 386 - 561
Target Start/End: Complemental strand, 3075 - 2908
Alignment:
Q  386 aataggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccctaagaagaagnnnnnnnctataaaaccgtccactaagttttg 485  Q
    |||||| ||||||||| ||||||  |||||| ||| ||||||||||||||||| ||| |||||| ||        ||| ||||| | ||  |||||||||    
T  3075 aataggattaatagcagttttagttccctaactttctcaaagttgcgattttgaccc-taagaaaaa------aactaaaaaactgccctttaagttttg 2983  T
Q  486 cacttgtggtggttttggcccccaagactaattttgactcggtctacgctgacgtgacaccctaagtgggatgcca 561  Q
    ||  ||||   ||||||||||| ||| | ||||||||||| ||||||  |||||||||||||||| || |||||||    
T  2982 catatgtgacagttttggccccaaagcc-aattttgactcagtctactttgacgtgacaccctaaatgagatgcca 2908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 497 - 547
Target Start/End: Original strand, 63138 - 63188
Alignment:
Q  497 gttttggcccccaagactaattttgactcggtctacgctgacgtgacaccc 547  Q
    ||||||||||||||||  |||||||||| ||||| |||||||||| |||||    
T  63138 gttttggcccccaagatcaattttgacttggtcttcgctgacgtggcaccc 63188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 519 - 561
Target Start/End: Original strand, 16644 - 16686
Alignment:
Q  519 ttgactcggtctacgctgacgtgacaccctaagtgggatgcca 561  Q
    ||||||||||| ||||||||||| ||||||||||| |||||||    
T  16644 ttgactcggtcaacgctgacgtggcaccctaagtgagatgcca 16686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 519 - 553
Target Start/End: Original strand, 79115 - 79149
Alignment:
Q  519 ttgactcggtctacgctgacgtgacaccctaagtg 553  Q
    ||||||||||| |||||||||||||||||||||||    
T  79115 ttgactcggtcaacgctgacgtgacaccctaagtg 79149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0854 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0854
Description:

Target: scaffold0854; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 497 - 546
Target Start/End: Original strand, 2006 - 2055
Alignment:
Q  497 gttttggcccccaagactaattttgactcggtctacgctgacgtgacacc 546  Q
    |||||| ||||| |||| ||||||||||||||| ||||||||||| ||||    
T  2006 gttttgaccccctagaccaattttgactcggtcaacgctgacgtggcacc 2055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 542
Target Start/End: Complemental strand, 9740 - 9703
Alignment:
Q  505 ccccaagactaattttgactcggtctacgctgacgtga 542  Q
    ||||||||| |||||||||||| |||||||||||||||    
T  9740 ccccaagaccaattttgactcgttctacgctgacgtga 9703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0725 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0725
Description:

Target: scaffold0725; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 388 - 448
Target Start/End: Complemental strand, 6747 - 6687
Alignment:
Q  388 taggcttaatagcaattttagccccctaaatttttcaaagttgcgattttggcccctaaga 448  Q
    |||||||||||||| |||||||||||||| |||    ||||||||||||| | ||||||||    
T  6747 taggcttaatagcagttttagccccctaagtttcaacaagttgcgattttagtccctaaga 6687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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