View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17720_high_5 (Length: 229)

Name: NF17720_high_5
Description: NF17720
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17720_high_5
NF17720_high_5
[»] chr1 (22 HSPs)
chr1 (134-210)||(47392222-47392298)
chr1 (19-80)||(47392107-47392168)
chr1 (142-209)||(23257180-23257247)
chr1 (142-210)||(49651936-49652004)
chr1 (142-210)||(23320532-23320600)
chr1 (142-209)||(22344867-22344934)
chr1 (147-210)||(29067146-29067209)
chr1 (160-210)||(21326583-21326633)
chr1 (160-209)||(32539145-32539194)
chr1 (160-209)||(38646694-38646743)
chr1 (170-210)||(48654995-48655035)
chr1 (147-210)||(27469662-27469725)
chr1 (162-209)||(30853744-30853791)
chr1 (147-210)||(37662307-37662370)
chr1 (163-209)||(10264822-10264868)
chr1 (161-210)||(10877457-10877506)
chr1 (159-208)||(22032047-22032096)
chr1 (150-207)||(26199680-26199737)
chr1 (161-210)||(44562703-44562752)
chr1 (170-206)||(630742-630778)
chr1 (170-210)||(5832354-5832394)
chr1 (170-210)||(12967686-12967726)
[»] chr2 (26 HSPs)
chr2 (142-209)||(16879920-16879987)
chr2 (142-209)||(16992053-16992120)
chr2 (142-210)||(11931006-11931074)
chr2 (142-209)||(3603077-3603144)
chr2 (147-210)||(41842045-41842108)
chr2 (149-210)||(7443520-7443581)
chr2 (161-210)||(44441493-44441542)
chr2 (160-209)||(44951529-44951578)
chr2 (142-210)||(7640310-7640378)
chr2 (142-209)||(3390524-3390591)
chr2 (160-207)||(10589177-10589224)
chr2 (159-210)||(17118767-17118818)
chr2 (142-209)||(25771537-25771604)
chr2 (160-210)||(13268682-13268732)
chr2 (160-210)||(17068869-17068919)
chr2 (160-210)||(25622999-25623049)
chr2 (160-210)||(29734300-29734350)
chr2 (160-210)||(43929254-43929304)
chr2 (147-210)||(15071503-15071566)
chr2 (142-209)||(27024094-27024161)
chr2 (159-210)||(37883762-37883813)
chr2 (160-210)||(10589205-10589255)
chr2 (160-210)||(17074866-17074916)
chr2 (160-209)||(19580957-19581006)
chr2 (160-209)||(25237281-25237330)
chr2 (166-207)||(44562588-44562629)
[»] chr7 (19 HSPs)
chr7 (160-210)||(13008627-13008677)
chr7 (147-210)||(43483697-43483760)
chr7 (142-209)||(47749826-47749893)
chr7 (147-210)||(23177537-23177600)
chr7 (142-209)||(40775359-40775426)
chr7 (161-210)||(14707694-14707743)
chr7 (161-209)||(7986003-7986051)
chr7 (147-195)||(9933944-9933992)
chr7 (166-210)||(10250437-10250481)
chr7 (142-210)||(26017612-26017680)
chr7 (147-210)||(14734003-14734066)
chr7 (142-209)||(42490795-42490862)
chr7 (160-210)||(30992777-30992827)
chr7 (160-210)||(44681570-44681620)
chr7 (147-208)||(135101-135162)
chr7 (171-208)||(22751559-22751596)
chr7 (147-207)||(5025013-5025073)
chr7 (142-210)||(23732347-23732415)
chr7 (142-210)||(43807104-43807172)
[»] chr3 (16 HSPs)
chr3 (161-210)||(22893669-22893718)
chr3 (142-209)||(29182563-29182630)
chr3 (161-210)||(29776644-29776693)
chr3 (161-209)||(40365337-40365385)
chr3 (142-209)||(43029775-43029842)
chr3 (160-210)||(40461949-40461999)
chr3 (149-210)||(913270-913331)
chr3 (149-210)||(22844151-22844212)
chr3 (149-210)||(25939433-25939494)
chr3 (173-210)||(32237950-32237987)
chr3 (149-210)||(39340298-39340359)
chr3 (150-210)||(40797133-40797193)
chr3 (142-209)||(1165351-1165418)
chr3 (160-207)||(4019705-4019752)
chr3 (142-209)||(33977880-33977946)
chr3 (160-210)||(1220201-1220251)
[»] chr6 (8 HSPs)
chr6 (142-210)||(32804387-32804455)
chr6 (147-207)||(5417155-5417215)
chr6 (147-203)||(15128114-15128170)
chr6 (142-210)||(23843378-23843446)
chr6 (142-209)||(13234063-13234130)
chr6 (147-208)||(10744680-10744741)
chr6 (160-209)||(12576436-12576484)
chr6 (160-209)||(34020715-34020764)
[»] chr8 (22 HSPs)
chr8 (142-209)||(9270113-9270180)
chr8 (147-208)||(37659063-37659124)
chr8 (142-210)||(8054761-8054829)
chr8 (163-210)||(5989743-5989790)
chr8 (142-209)||(44295408-44295475)
chr8 (160-210)||(26937635-26937685)
chr8 (142-195)||(41996637-41996690)
chr8 (163-210)||(11298714-11298761)
chr8 (147-210)||(12248668-12248731)
chr8 (160-195)||(17019228-17019263)
chr8 (160-195)||(17549665-17549700)
chr8 (142-209)||(32412882-32412949)
chr8 (160-210)||(5917696-5917746)
chr8 (145-195)||(9992762-9992812)
chr8 (161-211)||(12244169-12244219)
chr8 (160-210)||(14327589-14327639)
chr8 (160-210)||(16808986-16809036)
chr8 (142-195)||(7281096-7281149)
chr8 (160-209)||(27534367-27534416)
chr8 (149-210)||(32256675-32256736)
chr8 (147-207)||(1215296-1215356)
chr8 (142-210)||(5457163-5457231)
[»] chr5 (16 HSPs)
chr5 (160-210)||(20146170-20146220)
chr5 (142-209)||(29310309-29310376)
chr5 (142-209)||(31645921-31645988)
chr5 (147-209)||(6887133-6887195)
chr5 (147-208)||(20270811-20270872)
chr5 (173-210)||(24288880-24288917)
chr5 (173-210)||(24373305-24373342)
chr5 (142-206)||(10924091-10924155)
chr5 (147-210)||(22397502-22397565)
chr5 (147-210)||(33486523-33486586)
chr5 (160-207)||(34866537-34866584)
chr5 (149-195)||(8812120-8812166)
chr5 (160-210)||(41358149-41358199)
chr5 (160-210)||(41988262-41988312)
chr5 (142-195)||(9034911-9034964)
chr5 (142-210)||(4726882-4726950)
[»] chr4 (17 HSPs)
chr4 (149-207)||(30416578-30416636)
chr4 (142-210)||(23067802-23067870)
chr4 (142-209)||(9661945-9662012)
chr4 (142-209)||(14542467-14542534)
chr4 (147-210)||(38434696-38434759)
chr4 (147-209)||(4634380-4634442)
chr4 (147-209)||(32189077-32189139)
chr4 (161-210)||(46716848-46716897)
chr4 (147-208)||(46728876-46728937)
chr4 (170-209)||(9474494-9474533)
chr4 (147-210)||(33020879-33020942)
chr4 (160-210)||(44021525-44021575)
chr4 (142-195)||(12519748-12519801)
chr4 (147-208)||(15729937-15729998)
chr4 (163-208)||(16991985-16992030)
chr4 (160-209)||(47466015-47466064)
chr4 (162-210)||(14346543-14346591)
[»] scaffold0722 (1 HSPs)
scaffold0722 (142-210)||(5480-5548)
[»] scaffold0316 (1 HSPs)
scaffold0316 (142-209)||(12158-12225)
[»] scaffold0150 (1 HSPs)
scaffold0150 (142-195)||(10280-10333)
[»] scaffold0157 (1 HSPs)
scaffold0157 (142-195)||(1110-1163)
[»] scaffold0024 (1 HSPs)
scaffold0024 (142-195)||(36621-36674)
[»] scaffold0012 (1 HSPs)
scaffold0012 (160-209)||(244746-244795)


Alignment Details
Target: chr1 (Bit Score: 69; Significance: 4e-31; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 134 - 210
Target Start/End: Original strand, 47392222 - 47392298
Alignment:
Q  134 attggaaattatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtc 210  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  47392222 attggaaattatcttgtgatttcactgtcttagcgtgacgttggtttgttcgtcgtctttgtgcggcgttgtttgtc 47392298  T

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Target: chr1; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 47392107 - 47392168
Alignment:
Q  19 ggacatcactttttatattagtatatatagactacatatgttttcttcctcaagatgagata 80  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47392107 ggacatcactttttatattagtatatatagactacatatgttttcttcctcaagatgagata 47392168  T

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Target: chr1; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 142 - 209
Target Start/End: Original strand, 23257180 - 23257247
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgt 209  Q
    ||||||||||||||||  ||||| ||| |||||||||||||||||||||||||| || ||||||||||    
T  23257180 ttatcttgtgatttcatcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgt 23257247  T

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Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 142 - 210
Target Start/End: Original strand, 49651936 - 49652004
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtc 210  Q
    |||| ||||||||||   ||||| |||||||||| |||||||||||||||||||||| |||||||||||    
T  49651936 ttattttgtgatttcgtcgtcttcgtgtgacgttcgtttgttcgtcgtctttgtacgacgttgtttgtc 49652004  T

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Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 142 - 210
Target Start/End: Original strand, 23320532 - 23320600
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtc 210  Q
    |||| ||||||||||   ||||| |||||||||||||||||||||||||||||| || |||| ||||||    
T  23320532 ttattttgtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttatttgtc 23320600  T

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Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 209
Target Start/End: Complemental strand, 22344934 - 22344867
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgt 209  Q
    |||| ||||||||||   ||||| ||| |||||||||||||||||||||||||| || ||||||||||    
T  22344934 ttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgt 22344867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 210
Target Start/End: Original strand, 29067146 - 29067209
Alignment:
Q  147 ttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtc 210  Q
    |||||||||||   |||||||| ||||||| |||||||||||||||||| | ||||||||||||    
T  29067146 ttgtgatttcatcttcttagtgcgacgttgttttgttcgtcgtctttgtgcagcgttgtttgtc 29067209  T

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Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 160 - 210
Target Start/End: Original strand, 21326583 - 21326633
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtc 210  Q
    ||||| ||||||| |||||||||||||||||||||| || |||||||||||    
T  21326583 gtcttcgtgtgacattggtttgttcgtcgtctttgtgcgacgttgtttgtc 21326633  T

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Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 209
Target Start/End: Complemental strand, 32539194 - 32539145
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgt 209  Q
    ||||||||  |||||||||||||||||||||||||| || ||||||||||    
T  32539194 gtcttagtacgacgttggtttgttcgtcgtctttgtgcgacgttgtttgt 32539145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 38646694 - 38646743
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgt 209  Q
    ||||| ||| |||||||||||||||||||||||||| || ||||||||||    
T  38646694 gtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgt 38646743  T

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Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 210
Target Start/End: Complemental strand, 48655035 - 48654995
Alignment:
Q  170 gacgttggtttgttcgtcgtctttgtacggcgttgtttgtc 210  Q
    ||||||||||||||||||||||||||||  |||||||||||    
T  48655035 gacgttggtttgttcgtcgtctttgtacaacgttgtttgtc 48654995  T

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Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 210
Target Start/End: Complemental strand, 27469725 - 27469662
Alignment:
Q  147 ttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtc 210  Q
    ||||||||||   ||||||||| ||||||| ||||||| |||||||||| || |||||||||||    
T  27469725 ttgtgatttcgtcgtcttagtgcgacgttgttttgttcatcgtctttgtgcgacgttgtttgtc 27469662  T

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Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 209
Target Start/End: Complemental strand, 30853791 - 30853744
Alignment:
Q  162 cttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgt 209  Q
    ||||||| ||||||||||||||| |||| ||||| |||||||||||||    
T  30853791 cttagtgcgacgttggtttgttcatcgtgtttgtgcggcgttgtttgt 30853744  T

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Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 210
Target Start/End: Original strand, 37662307 - 37662370
Alignment:
Q  147 ttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtc 210  Q
    ||||||||| | |||||||||| ||||||| |||||| |||||||||||  || ||||||||||    
T  37662307 ttgtgattttattgtcttagtgcgacgttgttttgtttgtcgtctttgtgaggtgttgtttgtc 37662370  T

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Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 209
Target Start/End: Original strand, 10264822 - 10264868
Alignment:
Q  163 ttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgt 209  Q
    |||||| |||||||||||||||||||||||||| |  ||||||||||    
T  10264822 ttagtgcgacgttggtttgttcgtcgtctttgtgcaacgttgtttgt 10264868  T

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Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 161 - 210
Target Start/End: Original strand, 10877457 - 10877506
Alignment:
Q  161 tcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtc 210  Q
    |||||||| ||||||| ||||||||| ||||||||  |||||||||||||    
T  10877457 tcttagtgcgacgttgttttgttcgttgtctttgtgtggcgttgtttgtc 10877506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 208
Target Start/End: Complemental strand, 22032096 - 22032047
Alignment:
Q  159 tgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttg 208  Q
    |||||||||| || ||||||||||||||||||||| |  |||||||||||    
T  22032096 tgtcttagtgcgatgttggtttgttcgtcgtctttatgtggcgttgtttg 22032047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 207
Target Start/End: Original strand, 26199680 - 26199737
Alignment:
Q  150 tgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgttt 207  Q
    ||||||||  ||||||||| ||| ||| |||||||||||||||||| || ||||||||    
T  26199680 tgatttcatcgtcttagtgcgacattgttttgttcgtcgtctttgtgcgacgttgttt 26199737  T

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Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 161 - 210
Target Start/End: Complemental strand, 44562752 - 44562703
Alignment:
Q  161 tcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtc 210  Q
    |||| ||| |||||||||||||||||||||||||| || | |||||||||    
T  44562752 tcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacattgtttgtc 44562703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 206
Target Start/End: Complemental strand, 630778 - 630742
Alignment:
Q  170 gacgttggtttgttcgtcgtctttgtacggcgttgtt 206  Q
    |||||||||||||||||||||||||| || |||||||    
T  630778 gacgttggtttgttcgtcgtctttgtgcgacgttgtt 630742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 210
Target Start/End: Original strand, 5832354 - 5832394
Alignment:
Q  170 gacgttggtttgttcgtcgtctttgtacggcgttgtttgtc 210  Q
    |||||||||||||||||||| ||||| || |||||||||||    
T  5832354 gacgttggtttgttcgtcgtatttgtgcgacgttgtttgtc 5832394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 210
Target Start/End: Complemental strand, 12967726 - 12967686
Alignment:
Q  170 gacgttggtttgttcgtcgtctttgtacggcgttgtttgtc 210  Q
    |||||||||||||||||||||||||| || | |||||||||    
T  12967726 gacgttggtttgttcgtcgtctttgtgcgacattgtttgtc 12967686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 3e-16; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 142 - 209
Target Start/End: Complemental strand, 16879987 - 16879920
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgt 209  Q
    ||||||||||||||||  ||||| ||| |||||||||||||||||||||||||| || ||||||||||    
T  16879987 ttatcttgtgatttcatcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgt 16879920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 142 - 209
Target Start/End: Complemental strand, 16992120 - 16992053
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgt 209  Q
    ||||||||||||||||  ||||| ||| |||||||||||||||||||||||||| || ||||||||||    
T  16992120 ttatcttgtgatttcatcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgt 16992053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 142 - 210
Target Start/End: Original strand, 11931006 - 11931074
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtc 210  Q
    |||| |||||||||||  ||||||||||||||||||||||||||| ||||| ||| || ||||||||||    
T  11931006 ttattttgtgatttcatcgtcttagtgtgacgttggtttgttcgttgtcttcgtaaggagttgtttgtc 11931074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 142 - 209
Target Start/End: Original strand, 3603077 - 3603144
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgt 209  Q
    |||| |||||||||||  ||||| ||| |||||||||||||||||||||||||| || ||||||||||    
T  3603077 ttattttgtgatttcatcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgt 3603144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 147 - 210
Target Start/End: Original strand, 41842045 - 41842108
Alignment:
Q  147 ttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtc 210  Q
    ||||||||||   ||||||||| |||||||||||||||||||||||||| | ||||||||||||    
T  41842045 ttgtgatttcgtcgtcttagtgcgacgttggtttgttcgtcgtctttgtgctgcgttgtttgtc 41842108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 210
Target Start/End: Complemental strand, 7443581 - 7443520
Alignment:
Q  149 gtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtc 210  Q
    |||||||| | ||||||||| ||||||| |||||||||||||||||| || |||||||||||    
T  7443581 gtgatttcgccgtcttagtgcgacgttgttttgttcgtcgtctttgtgcgacgttgtttgtc 7443520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 210
Target Start/End: Original strand, 44441493 - 44441542
Alignment:
Q  161 tcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtc 210  Q
    |||||||| |||||| |||||||||||||||| |||||||||||||||||    
T  44441493 tcttagtgcgacgtttgtttgttcgtcgtcttcgtacggcgttgtttgtc 44441542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 44951529 - 44951578
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgt 209  Q
    ||||| ||| ||||||||||||||||||||||||||||| ||||||||||    
T  44951529 gtcttcgtgcgacgttggtttgttcgtcgtctttgtacgacgttgtttgt 44951578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 142 - 210
Target Start/End: Complemental strand, 7640378 - 7640310
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtc 210  Q
    |||| ||||||||||   ||||| ||| |||||||||||||||||||||||||| || |||||||||||    
T  7640378 ttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtc 7640310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 209
Target Start/End: Original strand, 3390524 - 3390591
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgt 209  Q
    |||| ||||||||||   ||||| ||| |||||||||||||||||||||||||| || ||||||||||    
T  3390524 ttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgt 3390591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 207
Target Start/End: Original strand, 10589177 - 10589224
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgttt 207  Q
    ||||||||||||||||| |||||||||||||||||| || ||||||||    
T  10589177 gtcttagtgtgacgttgttttgttcgtcgtctttgtgcgacgttgttt 10589224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 210
Target Start/End: Complemental strand, 17118818 - 17118767
Alignment:
Q  159 tgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtc 210  Q
    |||||||||| ||||||| |||||||||||||||||| ||| ||||||||||    
T  17118818 tgtcttagtgcgacgttgttttgttcgtcgtctttgtgcggtgttgtttgtc 17118767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 209
Target Start/End: Original strand, 25771537 - 25771604
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgt 209  Q
    |||| ||||||||||   ||||| ||| |||||||||||||||||||||||||| || ||||||||||    
T  25771537 ttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgt 25771604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 160 - 210
Target Start/End: Original strand, 13268682 - 13268732
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtc 210  Q
    ||||||||| ||||||| |||||||||||||||||| || |||||||||||    
T  13268682 gtcttagtgcgacgttgttttgttcgtcgtctttgtgcgacgttgtttgtc 13268732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 160 - 210
Target Start/End: Complemental strand, 17068919 - 17068869
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtc 210  Q
    ||||||||| ||||||| |||||||||||||||||| ||| ||||||||||    
T  17068919 gtcttagtgcgacgttgttttgttcgtcgtctttgtgcggtgttgtttgtc 17068869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 160 - 210
Target Start/End: Complemental strand, 25623049 - 25622999
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtc 210  Q
    ||||||||| ||| ||| |||||||||||||||||| ||||||||||||||    
T  25623049 gtcttagtgcgacattgttttgttcgtcgtctttgtgcggcgttgtttgtc 25622999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 160 - 210
Target Start/End: Original strand, 29734300 - 29734350
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtc 210  Q
    ||||||||||||||||| |||||| |||||| ||||||| |||||||||||    
T  29734300 gtcttagtgtgacgttgttttgtttgtcgtcgttgtacgacgttgtttgtc 29734350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 160 - 210
Target Start/End: Complemental strand, 43929304 - 43929254
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtc 210  Q
    ||||| ||| |||||||||||||||||||||||||| || |||||||||||    
T  43929304 gtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtc 43929254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 210
Target Start/End: Complemental strand, 15071566 - 15071503
Alignment:
Q  147 ttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtc 210  Q
    ||||||| |||  ||||||||  ||||||  ||||||||||||||||||||| |||||||||||    
T  15071566 ttgtgatatcatggtcttagtacgacgttattttgttcgtcgtctttgtacgtcgttgtttgtc 15071503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 209
Target Start/End: Complemental strand, 27024161 - 27024094
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgt 209  Q
    |||| ||||||||||   ||||| ||| ||| |||||||||||||||||||||| || ||||||||||    
T  27024161 ttattttgtgatttcgtcgtcttcgtgcgacattggtttgttcgtcgtctttgtgcgacgttgtttgt 27024094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 210
Target Start/End: Original strand, 37883762 - 37883813
Alignment:
Q  159 tgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtc 210  Q
    |||||||||| ||||||| |||||||||||||||||| ||  ||||||||||    
T  37883762 tgtcttagtgcgacgttgttttgttcgtcgtctttgtgcgatgttgtttgtc 37883813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 210
Target Start/End: Original strand, 10589205 - 10589255
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtc 210  Q
    ||||| ||| ||||||| |||||||||||||||||| || |||||||||||    
T  10589205 gtctttgtgcgacgttgttttgttcgtcgtctttgtgcgacgttgtttgtc 10589255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 210
Target Start/End: Complemental strand, 17074916 - 17074866
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtc 210  Q
    ||||||||| ||||||| ||||| |||||||||||| ||| ||||||||||    
T  17074916 gtcttagtgcgacgttgttttgtccgtcgtctttgtgcggtgttgtttgtc 17074866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 209
Target Start/End: Complemental strand, 19581006 - 19580957
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgt 209  Q
    ||||||||| ||| ||| |||||||||||||||||| || ||||||||||    
T  19581006 gtcttagtgcgacattgttttgttcgtcgtctttgtgcgacgttgtttgt 19580957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 209
Target Start/End: Complemental strand, 25237330 - 25237281
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgt 209  Q
    ||||||||| ||||||| |||||||||||||||||| || | ||||||||    
T  25237330 gtcttagtgcgacgttgttttgttcgtcgtctttgtgcgacattgtttgt 25237281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 207
Target Start/End: Complemental strand, 44562629 - 44562588
Alignment:
Q  166 gtgtgacgttggtttgttcgtcgtctttgtacggcgttgttt 207  Q
    |||||| ||||||||||||||||||||||| ||| |||||||    
T  44562629 gtgtgatgttggtttgttcgtcgtctttgtgcggtgttgttt 44562588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 160 - 210
Target Start/End: Complemental strand, 13008677 - 13008627
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtc 210  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  13008677 gtcttagtgcgacgttggtttgttcgtcgtctttgtgcggcgttgtttgtc 13008627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 147 - 210
Target Start/End: Original strand, 43483697 - 43483760
Alignment:
Q  147 ttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtc 210  Q
    |||||||||| | ||||||||| ||||||| |||||||||||||||||| || |||||||||||    
T  43483697 ttgtgatttcgccgtcttagtgcgacgttgttttgttcgtcgtctttgtgcgacgttgtttgtc 43483760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 142 - 209
Target Start/End: Original strand, 47749826 - 47749893
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgt 209  Q
    |||| ||||||||||  |||||| ||| |||||||||||||||||||||||||| || ||||||||||    
T  47749826 ttattttgtgatttcgttgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgt 47749893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 210
Target Start/End: Complemental strand, 23177600 - 23177537
Alignment:
Q  147 ttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtc 210  Q
    |||||||||| | ||||||||| ||| ||||||| |||||||||||||| ||||||||| ||||    
T  23177600 ttgtgatttctccgtcttagtgcgaccttggttttttcgtcgtctttgtgcggcgttgtctgtc 23177537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 209
Target Start/End: Original strand, 40775359 - 40775426
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgt 209  Q
    |||| ||||||||||   ||||| ||| |||||||||||||||||||||||||| || ||||||||||    
T  40775359 ttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgt 40775426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 210
Target Start/End: Original strand, 14707694 - 14707743
Alignment:
Q  161 tcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtc 210  Q
    |||||||||| |||||||||||| ||||| ||||| ||||||||||||||    
T  14707694 tcttagtgtggcgttggtttgttagtcgtttttgtgcggcgttgtttgtc 14707743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 209
Target Start/End: Original strand, 7986003 - 7986051
Alignment:
Q  161 tcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgt 209  Q
    |||| ||||||||||||||||||||||||||||||  | ||||||||||    
T  7986003 tcttcgtgtgacgttggtttgttcgtcgtctttgtgtgacgttgtttgt 7986051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 195
Target Start/End: Original strand, 9933944 - 9933992
Alignment:
Q  147 ttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgt 195  Q
    |||||||||| | ||||||||| ||||||| ||||||||||||||||||    
T  9933944 ttgtgatttcgccgtcttagtgcgacgttgttttgttcgtcgtctttgt 9933992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 210
Target Start/End: Complemental strand, 10250481 - 10250437
Alignment:
Q  166 gtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtc 210  Q
    ||||||||||| ||||||||||||||||||  |||||||||||||    
T  10250481 gtgtgacgttgttttgttcgtcgtctttgtgtggcgttgtttgtc 10250437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 210
Target Start/End: Complemental strand, 26017680 - 26017612
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtc 210  Q
    |||| ||||||||||   ||||| ||| || ||||||||||||||||||||||| || |||||||||||    
T  26017680 ttattttgtgatttcgtcgtcttcgtgcgatgttggtttgttcgtcgtctttgtgcgacgttgtttgtc 26017612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 210
Target Start/End: Complemental strand, 14734066 - 14734003
Alignment:
Q  147 ttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtc 210  Q
    ||||||||||   ||||||||| ||||||| |||||| ||||||||||| || |||||||||||    
T  14734066 ttgtgatttcgtcgtcttagtgcgacgttgttttgtttgtcgtctttgtgcgacgttgtttgtc 14734003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 209
Target Start/End: Original strand, 42490795 - 42490862
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgt 209  Q
    |||| |||||||||||  ||||| ||||||||||||||||||||| | |||||| || | ||||||||    
T  42490795 ttattttgtgatttcatcgtcttcgtgtgacgttggtttgttcgttgcctttgtgcgacattgtttgt 42490862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 210
Target Start/End: Complemental strand, 30992827 - 30992777
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtc 210  Q
    ||||| ||| ||||||| |||||||||||||||||| || |||||||||||    
T  30992827 gtcttcgtgcgacgttgatttgttcgtcgtctttgtgcgacgttgtttgtc 30992777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 210
Target Start/End: Original strand, 44681570 - 44681620
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtc 210  Q
    |||| ||||||||||||||||||||||||| |||||  | |||||||||||    
T  44681570 gtctcagtgtgacgttggtttgttcgtcgtttttgtgggacgttgtttgtc 44681620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 147 - 208
Target Start/End: Complemental strand, 135162 - 135101
Alignment:
Q  147 ttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttg 208  Q
    ||||||||||   ||||| ||| |||||||||||||||||||| ||||| || |||||||||    
T  135162 ttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtttttgtgcgacgttgtttg 135101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 208
Target Start/End: Original strand, 22751559 - 22751596
Alignment:
Q  171 acgttggtttgttcgtcgtctttgtacggcgttgtttg 208  Q
    ||||||||||||||||||||||| | ||||||||||||    
T  22751559 acgttggtttgttcgtcgtctttatgcggcgttgtttg 22751596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 207
Target Start/End: Complemental strand, 5025073 - 5025013
Alignment:
Q  147 ttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgttt 207  Q
    ||||||||||   ||||||||| ||| ||| |||||||||||||||||| || ||||||||    
T  5025073 ttgtgatttcgtcgtcttagtgcgaccttgttttgttcgtcgtctttgtgcgacgttgttt 5025013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 210
Target Start/End: Complemental strand, 23732415 - 23732347
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtc 210  Q
    |||| ||||||||||   ||||| ||| |||||||||||||||||| ||||||| || || ||||||||    
T  23732415 ttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcatctttgtgcgtcgctgtttgtc 23732347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 210
Target Start/End: Complemental strand, 43807172 - 43807104
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtc 210  Q
    |||| ||||||||||   ||||| ||| || ||||||||||||||| ||||||| || |||||||||||    
T  43807172 ttattttgtgatttcgtcgtcttcgtgcgatgttggtttgttcgtcatctttgtgcgacgttgtttgtc 43807104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 16)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 161 - 210
Target Start/End: Complemental strand, 22893718 - 22893669
Alignment:
Q  161 tcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtc 210  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  22893718 tcttagtgcgacgttggtttgttcgtcatctttgtacggcgttgtttgtc 22893669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 142 - 209
Target Start/End: Complemental strand, 29182630 - 29182563
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgt 209  Q
    |||| ||||||||||   ||||| |||||||||||||||||||||||||||||| || ||||||||||    
T  29182630 ttattttgtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgttgtttgt 29182563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 210
Target Start/End: Complemental strand, 29776693 - 29776644
Alignment:
Q  161 tcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtc 210  Q
    |||| ||| |||||| ||||||||||||||||||||||||||||||||||    
T  29776693 tctttgtgcgacgtttgtttgttcgtcgtctttgtacggcgttgtttgtc 29776644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 161 - 209
Target Start/End: Original strand, 40365337 - 40365385
Alignment:
Q  161 tcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgt 209  Q
    ||||| || |||||||||||||| |||||||||||||||||||||||||    
T  40365337 tcttaatgcgacgttggtttgtttgtcgtctttgtacggcgttgtttgt 40365385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 209
Target Start/End: Original strand, 43029775 - 43029842
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgt 209  Q
    |||| ||||||||||   ||||| ||| |||||||||||||||||||||||||| || ||||||||||    
T  43029775 ttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgt 43029842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 160 - 210
Target Start/End: Complemental strand, 40461999 - 40461949
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtc 210  Q
    ||||||||| || |||| |||||||||||||||||| ||||||||||||||    
T  40461999 gtcttagtgcgatgttgatttgttcgtcgtctttgtgcggcgttgtttgtc 40461949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 210
Target Start/End: Complemental strand, 913331 - 913270
Alignment:
Q  149 gtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtc 210  Q
    |||||||| ||||||||||| | | ||| |||||||||||||||||| || |||||||||||    
T  913331 gtgatttcgctgtcttagtgcggcattgttttgttcgtcgtctttgtgcgacgttgtttgtc 913270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 210
Target Start/End: Original strand, 22844151 - 22844212
Alignment:
Q  149 gtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtc 210  Q
    |||||||||  ||||||||| ||| ||| |||||||||||||||||| || |||||||||||    
T  22844151 gtgatttcatcgtcttagtgcgacattgttttgttcgtcgtctttgtgcgacgttgtttgtc 22844212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 210
Target Start/End: Complemental strand, 25939494 - 25939433
Alignment:
Q  149 gtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtc 210  Q
    ||||||||  ||||| |||| ||||||| |||||| ||||||||||| ||||||||||||||    
T  25939494 gtgatttcgttgtctcagtgcgacgttgttttgttagtcgtctttgtgcggcgttgtttgtc 25939433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 210
Target Start/End: Complemental strand, 32237987 - 32237950
Alignment:
Q  173 gttggtttgttcgtcgtctttgtacggcgttgtttgtc 210  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  32237987 gttggtttgttcgtcgtctttgtgcggcgttgtttgtc 32237950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 210
Target Start/End: Original strand, 39340298 - 39340359
Alignment:
Q  149 gtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtc 210  Q
    ||||||| || ||||||||| ||| ||| |||| ||||||||||||| ||||||||||||||    
T  39340298 gtgattttaccgtcttagtgcgactttgttttgctcgtcgtctttgtgcggcgttgtttgtc 39340359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 210
Target Start/End: Original strand, 40797133 - 40797193
Alignment:
Q  150 tgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtc 210  Q
    ||||||| | ||||||||| ||| ||| |||||||||||||||||| || |||||||||||    
T  40797133 tgatttcgccgtcttagtgagacattgttttgttcgtcgtctttgtgcgacgttgtttgtc 40797193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 209
Target Start/End: Complemental strand, 1165418 - 1165351
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgt 209  Q
    |||| ||||||||||   ||||| ||| |||||||||||||||||||||||||| |  ||||||||||    
T  1165418 ttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcaacgttgtttgt 1165351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 207
Target Start/End: Original strand, 4019705 - 4019752
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgttt 207  Q
    ||||||||| |||||||  ||||||||||||||||| |||||||||||    
T  4019705 gtcttagtgcgacgttgtgttgttcgtcgtctttgtgcggcgttgttt 4019752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 209
Target Start/End: Complemental strand, 33977946 - 33977880
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgt 209  Q
    |||| |||||||||||  ||||| ||| |||||||||| ||||||||||||||| || ||||||||||    
T  33977946 ttattttgtgatttcatcgtcttcgtgcgacgttggtt-gttcgtcgtctttgtgcgacgttgtttgt 33977880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 210
Target Start/End: Complemental strand, 1220251 - 1220201
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtc 210  Q
    ||||||||| || |||| |||||||||||||||||| |||| |||||||||    
T  1220251 gtcttagtgcgatgttgttttgttcgtcgtctttgtgcggctttgtttgtc 1220201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 142 - 210
Target Start/End: Original strand, 32804387 - 32804455
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtc 210  Q
    |||| |||||||||||  ||||||||| || |||||||||||| ||||||||||| |||||||||||||    
T  32804387 ttattttgtgatttcatcgtcttagtgagatgttggtttgttcctcgtctttgtatggcgttgtttgtc 32804455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 147 - 207
Target Start/End: Complemental strand, 5417215 - 5417155
Alignment:
Q  147 ttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgttt 207  Q
    ||||||||||   ||||| ||| |||||||||||||||||||||||||| |||||||||||    
T  5417215 ttgtgatttcgtcgtctttgtgcgacgttggtttgttcgtcgtctttgtgcggcgttgttt 5417155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 15128170 - 15128114
Alignment:
Q  147 ttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgtt 203  Q
    ||||||||||   ||||||||| |||||||||||||||||||||||||| |||||||    
T  15128170 ttgtgatttcgtcgtcttagtgcgacgttggtttgttcgtcgtctttgtgcggcgtt 15128114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 142 - 210
Target Start/End: Complemental strand, 23843446 - 23843378
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtc 210  Q
    |||| ||||||||||   ||||| ||| |||||||||||||||||||||||||| || |||||||||||    
T  23843446 ttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtc 23843378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 209
Target Start/End: Complemental strand, 13234130 - 13234063
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgt 209  Q
    |||| ||||||||||   ||||| ||| |||||||||||||||||||||||||| || ||||||||||    
T  13234130 ttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgt 13234063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 147 - 208
Target Start/End: Original strand, 10744680 - 10744741
Alignment:
Q  147 ttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttg 208  Q
    ||||||||||   ||||||||| ||| ||| |||||||||||||||||| || |||||||||    
T  10744680 ttgtgatttcgtcgtcttagtgcgaccttgttttgttcgtcgtctttgtgcgacgttgtttg 10744741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 209
Target Start/End: Complemental strand, 12576484 - 12576436
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgt 209  Q
    ||||| |||||||||||||| ||||||||||||||| || ||||||||||    
T  12576484 gtctttgtgtgacgttggtt-gttcgtcgtctttgtgcgacgttgtttgt 12576436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 34020715 - 34020764
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgt 209  Q
    ||||||||| |||| || |||||| |||||||||||||| ||||||||||    
T  34020715 gtcttagtgcgacgctgttttgtttgtcgtctttgtacgacgttgtttgt 34020764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 142 - 209
Target Start/End: Original strand, 9270113 - 9270180
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgt 209  Q
    |||| ||||||||||  |||||| ||| |||||||||||||||||||||||||| || ||||||||||    
T  9270113 ttattttgtgatttcgttgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgt 9270180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 147 - 208
Target Start/End: Original strand, 37659063 - 37659124
Alignment:
Q  147 ttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttg 208  Q
    ||||||||||  |||||||||| ||| ||| ||||||||||||||||||||| |||||||||    
T  37659063 ttgtgatttcgttgtcttagtgcgaccttgttttgttcgtcgtctttgtacgacgttgtttg 37659124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 142 - 210
Target Start/End: Complemental strand, 8054829 - 8054761
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtc 210  Q
    |||| ||||||||||   ||||| ||| |||||||||||||||||||||||||| || |||||||||||    
T  8054829 ttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtc 8054761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 163 - 210
Target Start/End: Original strand, 5989743 - 5989790
Alignment:
Q  163 ttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtc 210  Q
    |||||| ||||||||| |||||||||||||||| ||||||||||||||    
T  5989743 ttagtgcgacgttggtatgttcgtcgtctttgtgcggcgttgtttgtc 5989790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 209
Target Start/End: Original strand, 44295408 - 44295475
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgt 209  Q
    |||| ||||||||||   ||||| ||| |||||||||||||||||||||||||| || ||||||||||    
T  44295408 ttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgt 44295475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 160 - 210
Target Start/End: Original strand, 26937635 - 26937685
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtc 210  Q
    ||||||||| | ||||||||||||||||| |||||| ||||||||||||||    
T  26937635 gtcttagtgcgtcgttggtttgttcgtcgactttgtgcggcgttgtttgtc 26937685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 195
Target Start/End: Original strand, 41996637 - 41996690
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgt 195  Q
    |||| |||||||||||  ||||| ||| ||||||||||||||||||||||||||    
T  41996637 ttattttgtgatttcatcgtcttcgtgcgacgttggtttgttcgtcgtctttgt 41996690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 210
Target Start/End: Complemental strand, 11298761 - 11298714
Alignment:
Q  163 ttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtc 210  Q
    |||||| ||||||| |||||| ||||||||||| ||||||||||||||    
T  11298761 ttagtgcgacgttgttttgtttgtcgtctttgtgcggcgttgtttgtc 11298714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 210
Target Start/End: Complemental strand, 12248731 - 12248668
Alignment:
Q  147 ttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtc 210  Q
    ||||||||||   ||||||||| ||| ||| |||||||||||||||||| || |||||||||||    
T  12248731 ttgtgatttcgtcgtcttagtgcgaccttgttttgttcgtcgtctttgtgcgacgttgtttgtc 12248668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 195
Target Start/End: Original strand, 17019228 - 17019263
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgt 195  Q
    ||||||||| ||||||||||||||||||||||||||    
T  17019228 gtcttagtgcgacgttggtttgttcgtcgtctttgt 17019263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 195
Target Start/End: Original strand, 17549665 - 17549700
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgt 195  Q
    ||||||||| ||||||||||||||||||||||||||    
T  17549665 gtcttagtgcgacgttggtttgttcgtcgtctttgt 17549700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 209
Target Start/End: Original strand, 32412882 - 32412949
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgt 209  Q
    |||||||||||||||   ||||| ||| ||||||||||||||| |||||||||| ||  |||||||||    
T  32412882 ttatcttgtgatttcgtcgtcttcgtgcgacgttggtttgttcatcgtctttgtgcgatgttgtttgt 32412949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 210
Target Start/End: Complemental strand, 5917746 - 5917696
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtc 210  Q
    ||||||||| |||||||  ||||||||||||||||| || |||||||||||    
T  5917746 gtcttagtgcgacgttgtgttgttcgtcgtctttgtgcgacgttgtttgtc 5917696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 195
Target Start/End: Original strand, 9992762 - 9992812
Alignment:
Q  145 tcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgt 195  Q
    ||||||||||||   ||||| ||| ||||||||||||||||||||||||||    
T  9992762 tcttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgt 9992812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 211
Target Start/End: Complemental strand, 12244219 - 12244169
Alignment:
Q  161 tcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtcg 211  Q
    |||||||| ||||||| ||||||||||  |||||| |||||||||||||||    
T  12244219 tcttagtgcgacgttgttttgttcgtcaactttgtgcggcgttgtttgtcg 12244169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 210
Target Start/End: Original strand, 14327589 - 14327639
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtc 210  Q
    ||||||||| ||||||| |||||| ||||||||||| || |||||||||||    
T  14327589 gtcttagtgcgacgttgttttgtttgtcgtctttgtgcgacgttgtttgtc 14327639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 210
Target Start/End: Original strand, 16808986 - 16809036
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtc 210  Q
    |||| |||| |||||||| |||||||| |||||||| ||||||||||||||    
T  16808986 gtctaagtgggacgttgggttgttcgtggtctttgtgcggcgttgtttgtc 16809036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 195
Target Start/End: Complemental strand, 7281149 - 7281096
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgt 195  Q
    |||| |||||||||| | ||| ||||| ||| ||||||||||||||||||||||    
T  7281149 ttattttgtgatttcgccgtcatagtgcgacattggtttgttcgtcgtctttgt 7281096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 209
Target Start/End: Complemental strand, 27534416 - 27534367
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgt 209  Q
    ||||||||| ||| ||| |||||| ||||||||||| |||||||||||||    
T  27534416 gtcttagtgcgacattgttttgtttgtcgtctttgtgcggcgttgtttgt 27534367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 210
Target Start/End: Complemental strand, 32256736 - 32256675
Alignment:
Q  149 gtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtc 210  Q
    |||||||| | ||||||||| || |||| |||||| ||||||||||| || |||||||||||    
T  32256736 gtgatttcgccgtcttagtgcgatgttgttttgtttgtcgtctttgtgcgacgttgtttgtc 32256675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 207
Target Start/End: Complemental strand, 1215356 - 1215296
Alignment:
Q  147 ttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgttt 207  Q
    ||||||||||   ||||||||||||||||| |||||| ||| ||||||| || ||||||||    
T  1215356 ttgtgatttcgtcgtcttagtgtgacgttgttttgtttgtcatctttgtgcgacgttgttt 1215296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 210
Target Start/End: Original strand, 5457163 - 5457231
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtc 210  Q
    |||| ||||||||||   ||||| ||| |||||||||| |||||||||||| || || |||||||||||    
T  5457163 ttattttgtgatttcgtcgtcttcgtgcgacgttggttagttcgtcgtcttcgtgcgacgttgtttgtc 5457231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 160 - 210
Target Start/End: Complemental strand, 20146220 - 20146170
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtc 210  Q
    ||||||||| ||||||| |||||| ||||||||||||||||||||||||||    
T  20146220 gtcttagtgcgacgttgttttgtttgtcgtctttgtacggcgttgtttgtc 20146170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 209
Target Start/End: Complemental strand, 29310376 - 29310309
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgt 209  Q
    |||| ||||||||||   ||||| ||| |||||||||||||||||||||||||| || ||||||||||    
T  29310376 ttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgt 29310309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 209
Target Start/End: Original strand, 31645921 - 31645988
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgt 209  Q
    |||| ||||||||||   ||||| ||| |||||||||||||||||||||||||| || ||||||||||    
T  31645921 ttattttgtgatttcttcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgt 31645988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 147 - 209
Target Start/End: Complemental strand, 6887195 - 6887133
Alignment:
Q  147 ttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgt 209  Q
    ||||||||||   ||||| ||| |||||||||||||||||||||||||| || ||||||||||    
T  6887195 ttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgt 6887133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 208
Target Start/End: Original strand, 20270811 - 20270872
Alignment:
Q  147 ttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttg 208  Q
    ||||||||||   ||||||||| ||||||| |||||||||||||||||| || |||||||||    
T  20270811 ttgtgatttcgtcgtcttagtgcgacgttgttttgttcgtcgtctttgtgcgacgttgtttg 20270872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 210
Target Start/End: Complemental strand, 24288917 - 24288880
Alignment:
Q  173 gttggtttgttcgtcgtctttgtacggcgttgtttgtc 210  Q
    |||| |||||||||||||||||||||||||||||||||    
T  24288917 gttgatttgttcgtcgtctttgtacggcgttgtttgtc 24288880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 210
Target Start/End: Original strand, 24373305 - 24373342
Alignment:
Q  173 gttggtttgttcgtcgtctttgtacggcgttgtttgtc 210  Q
    |||| |||||||||||||||||||||||||||||||||    
T  24373305 gttgatttgttcgtcgtctttgtacggcgttgtttgtc 24373342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 206
Target Start/End: Complemental strand, 10924155 - 10924091
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtt 206  Q
    |||| ||||||||||   ||||| ||| |||||||||||||||||||||||||| || |||||||    
T  10924155 ttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtt 10924091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 210
Target Start/End: Complemental strand, 22397565 - 22397502
Alignment:
Q  147 ttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtc 210  Q
    ||||||||||   ||||||||| ||||||| |||||||||||||||||| || | |||||||||    
T  22397565 ttgtgatttcgtcgtcttagtgcgacgttgttttgttcgtcgtctttgtgcgacattgtttgtc 22397502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 210
Target Start/End: Complemental strand, 33486586 - 33486523
Alignment:
Q  147 ttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtc 210  Q
    ||||||||||   ||||||||| ||| ||| |||||||||||||||||| || |||||||||||    
T  33486586 ttgtgatttcgtcgtcttagtgcgaccttgttttgttcgtcgtctttgtgcgacgttgtttgtc 33486523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 207
Target Start/End: Original strand, 34866537 - 34866584
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgttt 207  Q
    ||||||||| ||||||  ||||||||||||||||||||||||| ||||    
T  34866537 gtcttagtgcgacgttattttgttcgtcgtctttgtacggcgtagttt 34866584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 195
Target Start/End: Complemental strand, 8812166 - 8812120
Alignment:
Q  149 gtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgt 195  Q
    |||||||| | ||||||||| ||||||| ||||||||||||||||||    
T  8812166 gtgatttcgccgtcttagtgcgacgttgttttgttcgtcgtctttgt 8812120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 210
Target Start/End: Original strand, 41358149 - 41358199
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtc 210  Q
    ||||||||| ||| ||| |||||||||||| ||||| ||||||||||||||    
T  41358149 gtcttagtgcgacattgttttgttcgtcgtgtttgtgcggcgttgtttgtc 41358199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 210
Target Start/End: Original strand, 41988262 - 41988312
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtc 210  Q
    ||||||||| ||||||| |||||| ||||||||||| |||| |||||||||    
T  41988262 gtcttagtgcgacgttgttttgtttgtcgtctttgtgcggctttgtttgtc 41988312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 195
Target Start/End: Complemental strand, 9034964 - 9034911
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgt 195  Q
    |||| |||||||||||  ||||| ||| ||||||||||||||| ||||||||||    
T  9034964 ttattttgtgatttcatcgtcttcgtgcgacgttggtttgttcctcgtctttgt 9034911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 210
Target Start/End: Complemental strand, 4726950 - 4726882
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtc 210  Q
    |||| ||||||||||   ||||| ||| || ||||||| ||||||||||||||| || |||||||||||    
T  4726950 ttattttgtgatttcgtcgtcttcgtgcgatgttggttagttcgtcgtctttgtgcgacgttgtttgtc 4726882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 17)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 149 - 207
Target Start/End: Complemental strand, 30416636 - 30416578
Alignment:
Q  149 gtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgttt 207  Q
    |||||||| ||||||||||| ||||||| |||||||||||||||||| || ||||||||    
T  30416636 gtgatttcgctgtcttagtgcgacgttgttttgttcgtcgtctttgtgcgacgttgttt 30416578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 142 - 210
Target Start/End: Complemental strand, 23067870 - 23067802
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtc 210  Q
    |||| ||||||||||   ||||| ||| |||||||||||||||||||||||||| || |||||||||||    
T  23067870 ttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtc 23067802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 209
Target Start/End: Original strand, 9661945 - 9662012
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgt 209  Q
    |||| ||||||||||   ||||| ||| |||||||||||||||||||||||||| || ||||||||||    
T  9661945 ttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgt 9662012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 209
Target Start/End: Complemental strand, 14542534 - 14542467
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgt 209  Q
    |||| ||||||||||   ||||| ||| |||||||||||||||||||||||||| || ||||||||||    
T  14542534 ttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgt 14542467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 210
Target Start/End: Original strand, 38434696 - 38434759
Alignment:
Q  147 ttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtc 210  Q
    ||||||||||   ||||||||| ||||||| |||||||||||||||||| || |||||||||||    
T  38434696 ttgtgatttcgtcgtcttagtgcgacgttgttttgttcgtcgtctttgtccgacgttgtttgtc 38434759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 147 - 209
Target Start/End: Original strand, 4634380 - 4634442
Alignment:
Q  147 ttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgt 209  Q
    ||||||||||   ||||| ||| |||||||||||||||||||||||||| || ||||||||||    
T  4634380 ttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgt 4634442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 147 - 209
Target Start/End: Original strand, 32189077 - 32189139
Alignment:
Q  147 ttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgt 209  Q
    ||||||||||   ||||| ||| |||||||||||||||||||||||||| || ||||||||||    
T  32189077 ttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgt 32189139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 210
Target Start/End: Complemental strand, 46716897 - 46716848
Alignment:
Q  161 tcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtc 210  Q
    |||| ||| |||||||||||||||||||||||||| || |||||||||||    
T  46716897 tcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtc 46716848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 208
Target Start/End: Complemental strand, 46728937 - 46728876
Alignment:
Q  147 ttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttg 208  Q
    ||||||||||   ||||||||| ||| ||| ||||||||||||||||||||| |||||||||    
T  46728937 ttgtgatttcgtcgtcttagtgcgaccttgttttgttcgtcgtctttgtacgacgttgtttg 46728876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 209
Target Start/End: Complemental strand, 9474533 - 9474494
Alignment:
Q  170 gacgttggtttgttcgtcgtctttgtacggcgttgtttgt 209  Q
    |||||||||||||||||||||||||| || ||||||||||    
T  9474533 gacgttggtttgttcgtcgtctttgtgcgacgttgtttgt 9474494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 210
Target Start/End: Complemental strand, 33020942 - 33020879
Alignment:
Q  147 ttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtc 210  Q
    |||||||||||   |||||||| |||| || |||||| ||||||||||| ||||||||||||||    
T  33020942 ttgtgatttcatcatcttagtgcgacgctgttttgtttgtcgtctttgtgcggcgttgtttgtc 33020879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 210
Target Start/End: Complemental strand, 44021575 - 44021525
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtc 210  Q
    |||||| |||||||||||||||||||||||||||   |||| |||||||||    
T  44021575 gtcttaatgtgacgttggtttgttcgtcgtctttaagcggcattgtttgtc 44021525  T

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Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 195
Target Start/End: Original strand, 12519748 - 12519801
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgt 195  Q
    |||| ||||||||||   ||||||||| |||||||||||||||||||| |||||    
T  12519748 ttattttgtgatttcgtcgtcttagtgcgacgttggtttgttcgtcgtatttgt 12519801  T

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Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 147 - 208
Target Start/End: Complemental strand, 15729998 - 15729937
Alignment:
Q  147 ttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttg 208  Q
    ||||||||||   ||||||||| ||| ||| |||||||||||||||||| || |||||||||    
T  15729998 ttgtgatttcgtcgtcttagtgcgaccttgttttgttcgtcgtctttgtgcgacgttgtttg 15729937  T

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Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 208
Target Start/End: Original strand, 16991985 - 16992030
Alignment:
Q  163 ttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttg 208  Q
    |||||||||||||| |||||| ||||||||||| || |||||||||    
T  16991985 ttagtgtgacgttgttttgtttgtcgtctttgtgcgacgttgtttg 16992030  T

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Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 47466015 - 47466064
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgt 209  Q
    ||||||||| |||| || |||||| |||||||||||||||| ||||||||    
T  47466015 gtcttagtgcgacgatgttttgtttgtcgtctttgtacggcattgtttgt 47466064  T

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Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 210
Target Start/End: Original strand, 14346543 - 14346591
Alignment:
Q  162 cttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtc 210  Q
    ||||||| ||||||| ||||||||||||| |||| || |||||||||||    
T  14346543 cttagtgcgacgttgttttgttcgtcgtcgttgtgcgacgttgtttgtc 14346591  T

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Target: scaffold0722 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 142 - 210
Target Start/End: Complemental strand, 5548 - 5480
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgtc 210  Q
    |||| ||||||||||   ||||| ||| |||||||||||||||||||||||||| || |||||||||||    
T  5548 ttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtc 5480  T

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Target: scaffold0316 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 209
Target Start/End: Complemental strand, 12225 - 12158
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgt 209  Q
    |||| ||||||||||   ||||| ||| |||||||||||||||||||||||||| || ||||||||||    
T  12225 ttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgt 12158  T

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Target: scaffold0150 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 195
Target Start/End: Complemental strand, 10333 - 10280
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgt 195  Q
    |||| |||||||||   |||||||||| ||||||||||||||||||||||||||    
T  10333 ttattttgtgatttggttgtcttagtgcgacgttggtttgttcgtcgtctttgt 10280  T

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Target: scaffold0157 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 195
Target Start/End: Complemental strand, 1163 - 1110
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgt 195  Q
    |||| ||||||||||   ||||||||| |||||||||||||||||||| |||||    
T  1163 ttattttgtgatttcgtcgtcttagtgcgacgttggtttgttcgtcgtatttgt 1110  T

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Target: scaffold0024 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 195
Target Start/End: Original strand, 36621 - 36674
Alignment:
Q  142 ttatcttgtgatttcactgtcttagtgtgacgttggtttgttcgtcgtctttgt 195  Q
    |||| ||||||||||   ||||| ||| ||||||||||||||||||||||||||    
T  36621 ttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgt 36674  T

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Target: scaffold0012 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 244746 - 244795
Alignment:
Q  160 gtcttagtgtgacgttggtttgttcgtcgtctttgtacggcgttgtttgt 209  Q
    ||||| ||| ||| |||||||||||||||||||||| || ||||||||||    
T  244746 gtcttcgtgcgaccttggtttgttcgtcgtctttgtgcgacgttgtttgt 244795  T

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