View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17720_low_3 (Length: 323)

Name: NF17720_low_3
Description: NF17720
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17720_low_3
NF17720_low_3
[»] chr6 (31 HSPs)
chr6 (19-299)||(13871463-13871743)
chr6 (19-131)||(12654146-12654258)
chr6 (19-131)||(31705331-31705449)
chr6 (35-131)||(4921740-4921836)
chr6 (19-131)||(1106704-1106822)
chr6 (19-131)||(31937257-31937375)
chr6 (24-131)||(8693496-8693609)
chr6 (14-129)||(4393938-4394059)
chr6 (23-181)||(23654366-23654530)
chr6 (19-131)||(2304675-2304793)
chr6 (30-131)||(14782990-14783097)
chr6 (19-131)||(23101245-23101363)
chr6 (19-131)||(35219750-35219868)
chr6 (24-131)||(15589950-15590063)
chr6 (37-130)||(8508295-8508388)
chr6 (19-131)||(23637957-23638075)
chr6 (254-297)||(2437576-2437619)
chr6 (23-131)||(12481211-12481325)
chr6 (72-131)||(19402706-19402765)
chr6 (19-130)||(2488304-2488415)
chr6 (19-66)||(6419695-6419742)
chr6 (200-238)||(2437459-2437497)
chr6 (23-65)||(30813304-30813346)
chr6 (254-291)||(9353391-9353428)
chr6 (19-68)||(20496422-20496471)
chr6 (19-66)||(29920754-29920801)
chr6 (19-121)||(1418940-1419042)
chr6 (200-238)||(9353499-9353537)
chr6 (255-304)||(14093513-14093561)
chr6 (56-128)||(16328948-16329020)
chr6 (26-66)||(21507681-21507721)
[»] chr2 (74 HSPs)
chr2 (19-131)||(5754454-5754566)
chr2 (20-130)||(4739496-4739612)
chr2 (26-183)||(32314556-32314719)
chr2 (19-129)||(6431245-6431355)
chr2 (24-131)||(43473970-43474083)
chr2 (19-131)||(12890955-12891073)
chr2 (19-131)||(11798365-11798478)
chr2 (19-119)||(15920052-15920152)
chr2 (19-127)||(34471136-34471244)
chr2 (19-131)||(9978506-9978624)
chr2 (19-131)||(10286844-10286962)
chr2 (19-131)||(28230934-28231052)
chr2 (19-131)||(32015419-32015537)
chr2 (19-131)||(38535142-38535260)
chr2 (24-131)||(28261730-28261843)
chr2 (23-131)||(34962917-34963031)
chr2 (19-131)||(36868174-36868292)
chr2 (19-131)||(35333671-35333789)
chr2 (19-131)||(44942452-44942570)
chr2 (19-129)||(17767403-17767513)
chr2 (35-129)||(20124628-20124722)
chr2 (19-130)||(31908654-31908770)
chr2 (19-130)||(43696035-43696152)
chr2 (19-127)||(11580973-11581081)
chr2 (19-131)||(4732236-4732354)
chr2 (19-66)||(11942605-11942652)
chr2 (19-131)||(12704853-12704971)
chr2 (23-131)||(38384298-38384412)
chr2 (24-131)||(18089239-18089352)
chr2 (19-129)||(20560969-20561085)
chr2 (19-131)||(40039151-40039263)
chr2 (72-131)||(4426554-4426613)
chr2 (24-130)||(7072790-7072902)
chr2 (19-131)||(22597301-22597419)
chr2 (21-120)||(13878848-13878953)
chr2 (21-120)||(14018973-14019078)
chr2 (19-129)||(45694289-45694399)
chr2 (19-68)||(29734419-29734468)
chr2 (19-68)||(37883882-37883931)
chr2 (19-131)||(29542958-29543077)
chr2 (60-131)||(4604191-4604262)
chr2 (19-131)||(9689822-9689940)
chr2 (25-68)||(15673810-15673853)
chr2 (25-68)||(26491530-26491573)
chr2 (19-131)||(33012214-33012332)
chr2 (19-115)||(34416600-34416702)
chr2 (19-131)||(41797760-41797875)
chr2 (200-234)||(3309574-3309608)
chr2 (254-304)||(21252872-21252922)
chr2 (200-238)||(29408495-29408533)
chr2 (200-238)||(45273041-45273079)
chr2 (19-68)||(2763364-2763413)
chr2 (19-68)||(11550431-11550480)
chr2 (35-82)||(802940-802987)
chr2 (19-66)||(8027840-8027887)
chr2 (19-126)||(11426814-11426921)
chr2 (35-130)||(13548760-13548855)
chr2 (25-68)||(19580844-19580887)
chr2 (27-66)||(25068087-25068126)
chr2 (254-297)||(41541353-41541396)
chr2 (19-82)||(43929136-43929199)
chr2 (200-238)||(1397833-1397871)
chr2 (200-238)||(4316966-4317004)
chr2 (200-238)||(11084235-11084273)
chr2 (200-238)||(16806260-16806298)
chr2 (200-238)||(16845541-16845579)
chr2 (19-85)||(20570185-20570251)
chr2 (19-65)||(34480197-34480243)
chr2 (27-68)||(10589324-10589365)
chr2 (19-68)||(19686249-19686298)
chr2 (19-68)||(20036611-20036660)
chr2 (19-68)||(25237167-25237216)
chr2 (19-67)||(12366098-12366146)
chr2 (19-59)||(16136322-16136362)
[»] chr1 (70 HSPs)
chr1 (19-131)||(32878874-32878986)
chr1 (19-129)||(9298259-9298369)
chr1 (19-129)||(12871789-12871899)
chr1 (19-131)||(42491059-42491171)
chr1 (19-131)||(15391089-15391207)
chr1 (19-131)||(28677967-28678085)
chr1 (19-131)||(14265450-14265568)
chr1 (19-131)||(45750644-45750762)
chr1 (24-131)||(3232954-3233067)
chr1 (19-129)||(42276523-42276639)
chr1 (19-131)||(44517313-44517432)
chr1 (19-131)||(47551261-47551373)
chr1 (19-131)||(32784245-32784363)
chr1 (19-131)||(45193465-45193583)
chr1 (24-131)||(37822188-37822300)
chr1 (24-130)||(4882201-4882313)
chr1 (22-131)||(26097851-26097960)
chr1 (23-131)||(13488377-13488491)
chr1 (23-131)||(18343779-18343892)
chr1 (19-129)||(4870870-4870986)
chr1 (22-131)||(10627166-10627280)
chr1 (33-129)||(29802794-29802890)
chr1 (23-131)||(27534863-27534977)
chr1 (19-131)||(29726434-29726552)
chr1 (19-131)||(33486867-33486985)
chr1 (36-131)||(7995414-7995515)
chr1 (24-131)||(29205451-29205564)
chr1 (19-129)||(40862662-40862772)
chr1 (19-68)||(13969476-13969525)
chr1 (254-303)||(19269979-19270028)
chr1 (19-68)||(33177434-33177483)
chr1 (19-68)||(44513838-44513887)
chr1 (19-68)||(52839759-52839808)
chr1 (19-131)||(13869803-13869915)
chr1 (19-131)||(29938404-29938515)
chr1 (27-131)||(51418150-51418260)
chr1 (25-131)||(10304744-10304850)
chr1 (19-85)||(13152652-13152718)
chr1 (254-304)||(36319716-36319766)
chr1 (200-238)||(52415474-52415512)
chr1 (19-80)||(5832451-5832512)
chr1 (19-68)||(12967568-12967617)
chr1 (19-68)||(15276282-15276331)
chr1 (19-68)||(25278672-25278721)
chr1 (19-68)||(25689684-25689733)
chr1 (19-131)||(33938850-33938968)
chr1 (46-130)||(8737517-8737601)
chr1 (19-67)||(46589378-46589426)
chr1 (25-68)||(8743977-8744020)
chr1 (60-131)||(17347763-17347834)
chr1 (92-131)||(20411738-20411777)
chr1 (25-68)||(27469550-27469593)
chr1 (19-130)||(28399172-28399283)
chr1 (36-131)||(39080775-39080870)
chr1 (19-131)||(50107756-50107870)
chr1 (200-238)||(4671750-4671788)
chr1 (19-65)||(8224406-8224452)
chr1 (254-304)||(11237826-11237876)
chr1 (19-65)||(12147884-12147930)
chr1 (254-304)||(13254505-13254555)
chr1 (27-65)||(37684934-37684972)
chr1 (27-65)||(37700545-37700583)
chr1 (200-238)||(40518843-40518881)
chr1 (41-130)||(8937797-8937885)
chr1 (19-68)||(26771335-26771384)
chr1 (19-68)||(34659477-34659526)
chr1 (19-68)||(40992527-40992576)
chr1 (19-68)||(44562585-44562634)
chr1 (55-131)||(13999132-13999208)
chr1 (92-128)||(15791191-15791227)
[»] chr7 (71 HSPs)
chr7 (19-127)||(4621210-4621318)
chr7 (19-131)||(21954661-21954773)
chr7 (19-131)||(29352392-29352504)
chr7 (19-131)||(17509041-17509159)
chr7 (19-131)||(17544055-17544173)
chr7 (19-131)||(24320060-24320178)
chr7 (19-131)||(45457393-45457511)
chr7 (21-131)||(3266552-3266668)
chr7 (19-129)||(9785485-9785601)
chr7 (19-181)||(1280974-1281142)
chr7 (19-131)||(9719810-9719928)
chr7 (19-131)||(21990828-21990946)
chr7 (19-131)||(24988317-24988435)
chr7 (19-131)||(28664778-28664896)
chr7 (20-130)||(26161118-26161234)
chr7 (19-131)||(48304229-48304348)
chr7 (19-131)||(10094607-10094725)
chr7 (27-131)||(10574547-10574657)
chr7 (19-131)||(17473589-17473707)
chr7 (19-131)||(17579507-17579625)
chr7 (19-131)||(41288122-41288240)
chr7 (19-131)||(45482230-45482348)
chr7 (19-126)||(42603606-42603719)
chr7 (19-128)||(9137125-9137234)
chr7 (19-128)||(39532812-39532927)
chr7 (19-112)||(44482710-44482809)
chr7 (60-131)||(11833184-11833255)
chr7 (19-131)||(36579178-36579296)
chr7 (24-131)||(42644838-42644951)
chr7 (19-64)||(37375883-37375928)
chr7 (19-131)||(9137574-9137685)
chr7 (19-119)||(14657694-14657794)
chr7 (19-66)||(15017212-15017259)
chr7 (19-131)||(32740918-32741036)
chr7 (19-131)||(36719389-36719507)
chr7 (36-131)||(38277010-38277105)
chr7 (60-131)||(46025913-46025984)
chr7 (200-238)||(2271561-2271599)
chr7 (200-238)||(27723638-27723676)
chr7 (19-131)||(6667561-6667679)
chr7 (25-68)||(9934072-9934115)
chr7 (60-131)||(21603626-21603697)
chr7 (19-129)||(25531620-25531731)
chr7 (25-121)||(36253106-36253208)
chr7 (19-127)||(40761758-40761872)
chr7 (19-82)||(45949515-45949578)
chr7 (200-238)||(4567731-4567769)
chr7 (24-130)||(6496059-6496165)
chr7 (200-234)||(12394575-12394609)
chr7 (200-238)||(37124595-37124633)
chr7 (254-299)||(12394439-12394484)
chr7 (19-131)||(37714645-37714757)
chr7 (25-68)||(134987-135030)
chr7 (249-304)||(4567605-4567660)
chr7 (29-68)||(23732239-23732278)
chr7 (23-66)||(32643205-32643248)
chr7 (26-68)||(5024899-5024941)
chr7 (200-238)||(16197201-16197239)
chr7 (19-69)||(17222303-17222353)
chr7 (26-68)||(28015586-28015628)
chr7 (200-238)||(35792746-35792784)
chr7 (19-68)||(772672-772721)
chr7 (62-131)||(5684530-5684599)
chr7 (62-131)||(5709580-5709649)
chr7 (25-82)||(16273597-16273654)
chr7 (14-131)||(31703374-31703491)
chr7 (19-68)||(33530311-33530360)
chr7 (254-299)||(37124468-37124513)
chr7 (60-129)||(43847238-43847307)
chr7 (19-131)||(25112678-25112789)
chr7 (36-68)||(35362960-35362992)
[»] chr5 (59 HSPs)
chr5 (25-131)||(25962085-25962191)
chr5 (24-131)||(26294899-26295012)
chr5 (23-131)||(17331494-17331608)
chr5 (25-131)||(11858076-11858186)
chr5 (19-131)||(6635414-6635532)
chr5 (19-131)||(980866-980984)
chr5 (19-129)||(7771658-7771774)
chr5 (21-131)||(17096080-17096196)
chr5 (22-131)||(3079174-3079289)
chr5 (19-131)||(23428418-23428536)
chr5 (19-129)||(12215301-12215410)
chr5 (19-182)||(20483301-20483470)
chr5 (19-124)||(177941-178051)
chr5 (19-129)||(17687373-17687483)
chr5 (19-130)||(23881953-23882070)
chr5 (19-124)||(7150984-7151089)
chr5 (23-131)||(33164310-33164423)
chr5 (19-130)||(34431227-34431341)
chr5 (19-129)||(39531249-39531363)
chr5 (19-131)||(2555187-2555305)
chr5 (60-131)||(6281210-6281281)
chr5 (19-131)||(6681713-6681831)
chr5 (23-131)||(29097955-29098069)
chr5 (19-131)||(32347551-32347669)
chr5 (19-126)||(39915664-39915771)
chr5 (200-238)||(8544363-8544401)
chr5 (19-129)||(14535066-14535176)
chr5 (19-129)||(17732223-17732339)
chr5 (19-68)||(18472562-18472611)
chr5 (19-131)||(17523365-17523477)
chr5 (22-131)||(17699719-17699834)
chr5 (19-131)||(32309330-32309442)
chr5 (19-66)||(42396350-42396397)
chr5 (28-131)||(11734665-11734774)
chr5 (204-238)||(12436376-12436410)
chr5 (200-234)||(18413003-18413037)
chr5 (60-126)||(18653953-18654019)
chr5 (18-68)||(37219232-37219282)
chr5 (200-238)||(42673709-42673747)
chr5 (19-68)||(4726764-4726813)
chr5 (72-129)||(12891844-12891901)
chr5 (20-65)||(34874093-34874138)
chr5 (24-126)||(39179670-39179778)
chr5 (19-68)||(40774990-40775039)
chr5 (19-68)||(41554716-41554765)
chr5 (254-290)||(17200377-17200413)
chr5 (60-131)||(3740523-3740594)
chr5 (25-68)||(20270943-20270986)
chr5 (19-66)||(33486405-33486452)
chr5 (19-66)||(42609381-42609428)
chr5 (200-238)||(6428435-6428473)
chr5 (204-238)||(19133277-19133311)
chr5 (19-68)||(5378531-5378580)
chr5 (19-68)||(6639223-6639272)
chr5 (25-82)||(6647755-6647812)
chr5 (27-68)||(8811996-8812037)
chr5 (19-68)||(14910512-14910561)
chr5 (243-304)||(36437081-36437142)
chr5 (25-66)||(40564999-40565040)
[»] chr4 (90 HSPs)
chr4 (19-131)||(5814512-5814624)
chr4 (24-131)||(8712696-8712803)
chr4 (19-131)||(8517296-8517411)
chr4 (19-131)||(31522112-31522230)
chr4 (19-131)||(39837761-39837879)
chr4 (19-131)||(42197719-42197837)
chr4 (19-131)||(7083649-7083771)
chr4 (19-131)||(13586077-13586195)
chr4 (20-131)||(56236666-56236777)
chr4 (19-130)||(22757261-22757378)
chr4 (25-131)||(24100306-24100418)
chr4 (19-126)||(626387-626500)
chr4 (19-131)||(7060489-7060607)
chr4 (19-131)||(20399740-20399858)
chr4 (19-131)||(26742300-26742418)
chr4 (19-131)||(32616696-32616814)
chr4 (19-131)||(36124185-36124303)
chr4 (19-131)||(38943985-38944103)
chr4 (20-131)||(6882122-6882239)
chr4 (35-181)||(12716976-12717122)
chr4 (24-131)||(13965726-13965839)
chr4 (24-131)||(50801383-50801496)
chr4 (29-131)||(24825815-24825923)
chr4 (21-131)||(29923001-29923117)
chr4 (20-129)||(55600381-55600490)
chr4 (19-131)||(22049247-22049359)
chr4 (19-131)||(394111-394229)
chr4 (19-118)||(6082267-6082366)
chr4 (19-131)||(19745555-19745673)
chr4 (19-131)||(19794133-19794251)
chr4 (19-131)||(24611637-24611754)
chr4 (19-131)||(26674538-26674656)
chr4 (19-131)||(27394996-27395114)
chr4 (19-131)||(43244218-43244336)
chr4 (19-131)||(477849-477967)
chr4 (60-131)||(39523575-39523647)
chr4 (19-131)||(2447966-2448084)
chr4 (28-131)||(3159160-3159263)
chr4 (22-65)||(7861038-7861081)
chr4 (19-131)||(11210150-11210268)
chr4 (19-131)||(25658333-25658451)
chr4 (19-131)||(43278100-43278218)
chr4 (19-127)||(51152294-51152408)
chr4 (19-68)||(1657402-1657451)
chr4 (19-68)||(29257454-29257503)
chr4 (19-68)||(29474164-29474213)
chr4 (19-129)||(45350907-45351023)
chr4 (19-129)||(45360386-45360502)
chr4 (25-131)||(53647798-53647910)
chr4 (19-67)||(29589197-29589245)
chr4 (19-131)||(40198388-40198500)
chr4 (35-118)||(22621610-22621693)
chr4 (60-131)||(24568597-24568668)
chr4 (19-130)||(27090890-27091001)
chr4 (24-130)||(28837232-28837344)
chr4 (19-66)||(30202275-30202322)
chr4 (23-130)||(6911847-6911960)
chr4 (200-238)||(19443272-19443310)
chr4 (200-238)||(25494142-25494180)
chr4 (200-238)||(34031714-34031752)
chr4 (254-304)||(49263285-49263335)
chr4 (200-238)||(54982390-54982428)
chr4 (19-68)||(4959410-4959459)
chr4 (19-68)||(14346660-14346709)
chr4 (19-68)||(26576339-26576388)
chr4 (35-80)||(38434816-38434861)
chr4 (19-68)||(41837560-41837609)
chr4 (19-68)||(43157006-43157055)
chr4 (60-129)||(43493171-43493240)
chr4 (19-129)||(44756879-44756995)
chr4 (19-68)||(47704182-47704231)
chr4 (28-80)||(9526190-9526242)
chr4 (35-131)||(24789355-24789451)
chr4 (35-131)||(24818808-24818904)
chr4 (19-59)||(29266722-29266762)
chr4 (200-236)||(47944185-47944221)
chr4 (72-131)||(7861102-7861161)
chr4 (92-131)||(29268693-29268732)
chr4 (25-68)||(41486804-41486847)
chr4 (200-238)||(1821295-1821333)
chr4 (200-238)||(2493515-2493553)
chr4 (35-131)||(18995455-18995548)
chr4 (41-131)||(22121612-22121702)
chr4 (19-125)||(31932434-31932540)
chr4 (200-238)||(49299558-49299596)
chr4 (254-299)||(9089360-9089405)
chr4 (200-233)||(24073769-24073802)
chr4 (254-291)||(38044578-38044615)
chr4 (254-299)||(54982498-54982543)
chr4 (28-68)||(32189208-32189248)
[»] chr8 (52 HSPs)
chr8 (19-129)||(32778808-32778918)
chr8 (19-131)||(10334342-10334454)
chr8 (19-131)||(37128333-37128450)
chr8 (19-131)||(2968698-2968810)
chr8 (19-131)||(7579700-7579818)
chr8 (19-131)||(10338667-10338785)
chr8 (19-131)||(2234315-2234433)
chr8 (19-131)||(14600543-14600661)
chr8 (23-127)||(41361902-41362012)
chr8 (28-131)||(4757331-4757440)
chr8 (19-130)||(31407593-31407710)
chr8 (19-129)||(10148113-10148229)
chr8 (19-125)||(11162055-11162167)
chr8 (19-181)||(24791013-24791181)
chr8 (19-131)||(13576045-13576157)
chr8 (19-131)||(2025069-2025187)
chr8 (19-82)||(3925526-3925589)
chr8 (19-131)||(12329793-12329911)
chr8 (19-131)||(30026727-30026845)
chr8 (24-131)||(9501752-9501865)
chr8 (24-130)||(13570589-13570701)
chr8 (19-123)||(6219947-6220051)
chr8 (19-131)||(1810067-1810185)
chr8 (60-131)||(43937069-43937140)
chr8 (200-238)||(5871184-5871222)
chr8 (37-131)||(10633050-10633144)
chr8 (19-130)||(24210408-24210525)
chr8 (200-238)||(32234039-32234077)
chr8 (24-131)||(37612819-37612932)
chr8 (24-131)||(39067539-39067652)
chr8 (19-68)||(16937175-16937224)
chr8 (19-131)||(22787658-22787774)
chr8 (254-303)||(34146499-34146548)
chr8 (61-129)||(28297000-28297068)
chr8 (19-131)||(3204630-3204748)
chr8 (19-131)||(19720175-19720293)
chr8 (19-127)||(31308318-31308432)
chr8 (200-238)||(11087508-11087546)
chr8 (27-127)||(24700002-24700108)
chr8 (60-130)||(31202625-31202695)
chr8 (200-238)||(38401890-38401928)
chr8 (19-68)||(10043001-10043050)
chr8 (19-68)||(15665768-15665817)
chr8 (19-68)||(16938113-16938162)
chr8 (20-68)||(23766969-23767017)
chr8 (204-238)||(16599085-16599119)
chr8 (30-68)||(32920873-32920911)
chr8 (92-181)||(1039818-1039907)
chr8 (27-68)||(32256565-32256606)
chr8 (28-68)||(5989859-5989899)
chr8 (26-66)||(18196989-18197029)
chr8 (19-59)||(38545999-38546039)
[»] chr3 (63 HSPs)
chr3 (19-131)||(105886-105998)
chr3 (19-131)||(14585628-14585746)
chr3 (19-131)||(35174874-35174992)
chr3 (19-131)||(49627940-49628058)
chr3 (19-131)||(36624540-36624658)
chr3 (19-129)||(40013117-40013233)
chr3 (19-131)||(40883711-40883829)
chr3 (24-131)||(54706565-54706678)
chr3 (35-131)||(47733744-47733840)
chr3 (19-131)||(53155275-53155393)
chr3 (19-131)||(53402787-53402905)
chr3 (24-131)||(31270492-31270605)
chr3 (19-131)||(22485131-22485249)
chr3 (19-131)||(13701847-13701964)
chr3 (19-131)||(27189249-27189367)
chr3 (19-66)||(36691644-36691691)
chr3 (26-130)||(48401029-48401139)
chr3 (19-131)||(55455031-55455155)
chr3 (19-130)||(31462591-31462708)
chr3 (19-131)||(2147923-2148033)
chr3 (19-66)||(1074739-1074786)
chr3 (35-118)||(20044715-20044798)
chr3 (23-131)||(48652289-48652403)
chr3 (23-131)||(48855043-48855157)
chr3 (200-238)||(27817779-27817817)
chr3 (200-238)||(45667776-45667814)
chr3 (19-68)||(4019827-4019876)
chr3 (19-131)||(55446223-55446341)
chr3 (19-131)||(48212506-48212618)
chr3 (19-131)||(53962284-53962396)
chr3 (23-131)||(11819249-11819363)
chr3 (23-131)||(33637569-33637683)
chr3 (19-131)||(41868168-41868286)
chr3 (19-69)||(4206399-4206449)
chr3 (24-66)||(24483529-24483571)
chr3 (24-130)||(31730811-31730917)
chr3 (19-129)||(39429352-39429462)
chr3 (19-85)||(40702647-40702713)
chr3 (200-238)||(45646939-45646977)
chr3 (19-68)||(39340428-39340477)
chr3 (19-68)||(53427027-53427076)
chr3 (55-131)||(3961649-3961725)
chr3 (26-66)||(34960754-34960794)
chr3 (26-127)||(45047684-45047791)
chr3 (19-131)||(50637817-50637929)
chr3 (60-131)||(3457105-3457176)
chr3 (19-66)||(19861124-19861171)
chr3 (19-131)||(30156126-30156244)
chr3 (23-66)||(32080603-32080646)
chr3 (60-127)||(34103640-34103706)
chr3 (26-65)||(48401356-48401395)
chr3 (19-65)||(21084574-21084620)
chr3 (200-238)||(21934158-21934196)
chr3 (19-69)||(25084252-25084302)
chr3 (19-129)||(25135162-25135272)
chr3 (200-238)||(37030598-37030636)
chr3 (24-66)||(38530178-38530220)
chr3 (27-68)||(913160-913201)
chr3 (19-68)||(2598307-2598356)
chr3 (19-68)||(26412519-26412568)
chr3 (19-51)||(36734631-36734663)
chr3 (19-51)||(51990720-51990752)
chr3 (60-131)||(54238912-54238981)
[»] scaffold1379 (2 HSPs)
scaffold1379 (20-127)||(927-1034)
scaffold1379 (60-129)||(143-212)
[»] scaffold0321 (1 HSPs)
scaffold0321 (19-131)||(6967-7079)
[»] scaffold0294 (1 HSPs)
scaffold0294 (19-131)||(3904-4022)
[»] scaffold0536 (1 HSPs)
scaffold0536 (21-127)||(3070-3182)
[»] scaffold0056 (1 HSPs)
scaffold0056 (19-129)||(74332-74448)
[»] scaffold0121 (1 HSPs)
scaffold0121 (19-131)||(13082-13200)
[»] scaffold0432 (2 HSPs)
scaffold0432 (19-81)||(2279-2341)
scaffold0432 (99-131)||(2343-2375)
[»] scaffold0001 (1 HSPs)
scaffold0001 (19-127)||(404098-404205)
[»] scaffold1350 (1 HSPs)
scaffold1350 (60-131)||(1740-1811)
[»] scaffold0155 (1 HSPs)
scaffold0155 (19-131)||(35250-35368)
[»] scaffold1327 (1 HSPs)
scaffold1327 (200-238)||(1122-1160)
[»] scaffold0999 (1 HSPs)
scaffold0999 (19-85)||(1916-1982)
[»] scaffold0202 (1 HSPs)
scaffold0202 (19-129)||(22469-22579)
[»] scaffold0018 (1 HSPs)
scaffold0018 (19-82)||(136910-136973)


Alignment Details
Target: chr6 (Bit Score: 173; Significance: 5e-93; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 19 - 299
Target Start/End: Original strand, 13871463 - 13871743
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaaca 118  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||||||| || ||||||||||| || ||||||||||||||||||||| |||||||    
T  13871463 aatactcatgtctccggatctgcaacgttgacgacgccaaagtcattgatcagatttgcacttgctcaaagcaaatcttccaacctgaatcaaataaaca 13871562  T
Q  119 ccgcactaagacgnnnnnnnnnnnncacaccacacaacgacgagaaatcaaaacaaatagagttccaaagagtcttcaactattgtcaattttctaaata 218  Q
    | |||||||||||            |||||| ||||| ||||  |||||||||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  13871563 ctgcactaagacggaaaataaaaaacacaccgcacaaagacggaaaatcaaaacaaatagagttccaatgagtcttcaactatcgtcaattttctaaata 13871662  T
Q  219 ttgtgcacatctttttaattgtcatcttgtttttctcaaatgagtcttcaactatttctccttcttcacctcttatcagca 299  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||    
T  13871663 ttgtgcaaatctttttaattgtcatcttgtttttctcaaatgagacttcaactatttctccctcttcacctctcatcagca 13871743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 12654146 - 12654258
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaaca 118  Q
    |||||||||||||||  |||||||||||||| ||| |||||||||||||||| |||| ||||||||| |||| | |||| |||||| ||||| |||||||    
T  12654146 aatactcatgtctccgaatctgcaacgttgatgacgccaaagtcattgatcagatctacacttgctcaaaactagtctttcaacctaaatcaaataaaca 12654245  T
Q  119 ccgcactaagacg 131  Q
    || ||||||||||    
T  12654246 ccacactaagacg 12654258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 31705449 - 31705331
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtc------attgatcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    ||||||||||||||| ||||||||||||||||||||||||||||      |||||||  ||||||||||| || || | |||||| |||||||||||| |    
T  31705449 aatactcatgtctccggatctgcaacgttgacgacaccaaagtcattgtcattgatcggatctgcacttgttcaaagctaatctttcaacctgaatcaaa 31705350  T
Q  113 taaacaccgcactaagacg 131  Q
    |||||||||||||||||||    
T  31705349 taaacaccgcactaagacg 31705331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 35 - 131
Target Start/End: Original strand, 4921740 - 4921836
Alignment:
Q  35 gatctgcaacgttgacgacaccaaagtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaacaccgcactaagacg 131  Q
    |||||||||||||||||||| ||||||||||||||  |||||||||||||| || | |||||| ||||||| |||| |||||||||||| |||||||    
T  4921740 gatctgcaacgttgacgacaacaaagtcattgatcggatctgcacttgctcaaagctaatctttcaacctggatcaaataaacaccgcagtaagacg 4921836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 1106704 - 1106822
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaa------gtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    ||||||||||||||| ||||||||||||||||||| |||||      ||||||||||| |||||||||||||| || | |||||| |||||||||||| |    
T  1106704 aatactcatgtctccggatctgcaacgttgacgacgccaaagtcattgtcattgatcagatctgcacttgctcaaagctaatctttcaacctgaatcaaa 1106803  T
Q  113 taaacaccgcactaagacg 131  Q
    |||||| || |||||||||    
T  1106804 taaacatcgtactaagacg 1106822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 31937257 - 31937375
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaa------gtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    |||||| |||||||| |||||||||||||||||||||||||      ||||||||||  ||||||||||| || || | |||||| |||||||||||| |    
T  31937257 aatacttatgtctccggatctgcaacgttgacgacaccaaagtcattgtcattgatcggatctgcacttgttcaaagctaatctttcaacctgaatcaaa 31937356  T
Q  113 taaacaccgcactaagacg 131  Q
    |||||||||||||||||||    
T  31937357 taaacaccgcactaagacg 31937375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 24 - 131
Target Start/End: Original strand, 8693496 - 8693609
Alignment:
Q  24 tcatgtctccagatctgcaacgttgacgacaccaaagtca------ttgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaac 117  Q
    |||||||||| |||||||||||||||||||||||||||||      ||||||  |||||||||||||| || | |||||| |||||||||||| ||||||    
T  8693496 tcatgtctccggatctgcaacgttgacgacaccaaagtcattgtccttgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaac 8693595  T
Q  118 accgcactaagacg 131  Q
    || |||||||||||    
T  8693596 actgcactaagacg 8693609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 14 - 129
Target Start/End: Complemental strand, 4394059 - 4393938
Alignment:
Q  14 tcatcaatactcatgtctccagatctgcaacgttgacgacaccaaagtcat------tgatcatatctgcacttgctccaaacaaatcttccaacctgaa 107  Q
    |||| ||||||||||||||| ||||||||||||||||||| ||||||||||      |||||| ||||||||||| || ||   |||||| ||||||||     
T  4394059 tcatgaatactcatgtctccggatctgcaacgttgacgacgccaaagtcattgtcagtgatcagatctgcacttgatcaaagttaatctttcaacctgag 4393960  T
Q  108 tcatataaacaccgcactaaga 129  Q
    ||| ||||||||||||||||||    
T  4393959 tcaaataaacaccgcactaaga 4393938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 23 - 181
Target Start/End: Complemental strand, 23654530 - 23654366
Alignment:
Q  23 ctcatgtctccagatctgcaacgttgacgacaccaaagtcattg------atcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaa 116  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||      |||  |||||| |||| || || | |||||| |||||||||||| |||||    
T  23654530 ctcatgtctccggatctgcaacgttgacgacgccaaagtcattgtcattgatcggatctgctcttgttcaaagctaatctttcaacctgaatcaaataaa 23654431  T
Q  117 caccgcactaagacgnnnnnnnnnnnncacaccacacaacgacgagaaatcaaaacaaatagagt 181  Q
    |||||||||||||||            |||||||||||| |||| |||||||||||||| |||||    
T  23654430 caccgcactaagacgggaaatcaaaaacacaccacacaaagacgggaaatcaaaacaaacagagt 23654366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 2304675 - 2304793
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattg------atcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    ||||||||||||||| |||||||||||||||| |  ||||||||||||      |||  |||||||||||||| || | |||||| |||||||||||| |    
T  2304675 aatactcatgtctccggatctgcaacgttgacaatgccaaagtcattgtcattgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaa 2304774  T
Q  113 taaacaccgcactaagacg 131  Q
    ||||||| |||||||||||    
T  2304775 taaacactgcactaagacg 2304793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 131
Target Start/End: Original strand, 14782990 - 14783097
Alignment:
Q  30 ctccagatctgcaacgttgacgacaccaaagtca------ttgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaacaccgca 123  Q
    |||| |||||||||||||||||||||||||||||      ||||||| |||||||||||||| |||| |||||| ||| || ||||| ||| ||||| ||    
T  14782990 ctccggatctgcaacgttgacgacaccaaagtcattgtcattgatcacatctgcacttgctcaaaactaatctttcaatctaaatcaaatatacaccaca 14783089  T
Q  124 ctaagacg 131  Q
    ||||||||    
T  14783090 ctaagacg 14783097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 23101245 - 23101363
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaa------gtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    ||||||||||||||| ||||||||||||||||||| |||||      ||||||||||  || ||||||||||| ||   |||||| |||||||||||| |    
T  23101245 aatactcatgtctccggatctgcaacgttgacgacgccaaagtcattgtcattgatcggatttgcacttgctcaaagttaatctttcaacctgaatcaaa 23101344  T
Q  113 taaacaccgcactaagacg 131  Q
    |||| ||||||| ||||||    
T  23101345 taaataccgcacaaagacg 23101363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 35219750 - 35219868
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattg------atcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    ||||||||||| ||| |||||||||||||||||||  |||||||||||      |||  || ||||||||||| || | ||| || |||||||||||| |    
T  35219750 aatactcatgtttccggatctgcaacgttgacgacgtcaaagtcattgtcattgatcggatttgcacttgctcaaagctaatttttcaacctgaatcaaa 35219849  T
Q  113 taaacaccgcactaagacg 131  Q
    |||||||||||||||||||    
T  35219850 taaacaccgcactaagacg 35219868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 24 - 131
Target Start/End: Original strand, 15589950 - 15590063
Alignment:
Q  24 tcatgtctccagatctgcaacgttgacgacaccaaag------tcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaac 117  Q
    |||||||||| |||||||||| |||||||| ||||||      |||||||||  || ||||||||||| || | |||||| |||||||||||| ||||||    
T  15589950 tcatgtctccggatctgcaacattgacgacgccaaagccattgtcattgatcggatttgcacttgctcaaagctaatctttcaacctgaatcaaataaac 15590049  T
Q  118 accgcactaagacg 131  Q
    |||||| |||||||    
T  15590050 accgcattaagacg 15590063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 37 - 130
Target Start/End: Complemental strand, 8508388 - 8508295
Alignment:
Q  37 tctgcaacgttgacgacaccaaagtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaacaccgcactaagac 130  Q
    ||||||||||||||||| | ||||||||||||   ||||||||||| || |||| ||||||  || |||||||| ||||||||| |||||||||    
T  8508388 tctgcaacgttgacgacgcaaaagtcattgattcaatctgcacttgatcaaaactaatcttttaatctgaatcaaataaacaccacactaagac 8508295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 23637957 - 23638075
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgatcat-------atctgcacttgctccaaacaaatcttccaacctgaatcat 111  Q
    ||||||||||||||| |||||||||| ||||||||  ||||||||||| ||||       ||| ||| |||||| || | |||||| ||||||||||||     
T  23637957 aatactcatgtctccggatctgcaacattgacgacgtcaaagtcattg-tcatttattggatcagcatttgctcaaagctaatctttcaacctgaatcaa 23638055  T
Q  112 ataaacaccgcactaagacg 131  Q
    ||||||||||||||||||||    
T  23638056 ataaacaccgcactaagacg 23638075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 254 - 297
Target Start/End: Original strand, 2437576 - 2437619
Alignment:
Q  254 tcaaatgagtcttcaactatttctccttcttcacctcttatcag 297  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  2437576 tcaaatgagtcttcaactatttctccttcttcacctctcatcag 2437619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 131
Target Start/End: Original strand, 12481211 - 12481325
Alignment:
Q  23 ctcatgtctccagatctgcaacgttgacgacaccaaag------tcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaa 116  Q
    ||||||||||| ||||||||||||||||||| ||||||      |||||||||  |||||| |||| || ||   |||||| |||||| ||||| |||||    
T  12481211 ctcatgtctccggatctgcaacgttgacgacgccaaagtcattttcattgatcggatctgctcttgttcaaagttaatctttcaacctaaatcaaataaa 12481310  T
Q  117 caccgcactaagacg 131  Q
    |||||||||||||||    
T  12481311 caccgcactaagacg 12481325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 72 - 131
Target Start/End: Original strand, 19402706 - 19402765
Alignment:
Q  72 atctgcacttgctccaaacaaatcttccaacctgaatcatataaacaccgcactaagacg 131  Q
    |||||||||||||| || | |||||| |||||||||||| ||||||||||||||||||||    
T  19402706 atctgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcactaagacg 19402765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 2488415 - 2488304
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaaca 118  Q
    |||||||| |||||| |||||||  |||| || ||  |||| |||||||||  |||| ||||||||| ||   |||||| |||||||||| | |||||||    
T  2488415 aatactcaagtctccggatctgcctcgttaacaacgtcaaaatcattgatcggatctacacttgctcaaagttaatctttcaacctgaataagataaaca 2488316  T
Q  119 ccgcactaagac 130  Q
    ||||||||||||    
T  2488315 ccgcactaagac 2488304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 66
Target Start/End: Original strand, 6419695 - 6419742
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattg 66  Q
    ||||||||||||||| |||||||||| |||||||| ||||||||||||    
T  6419695 aatactcatgtctccggatctgcaactttgacgacgccaaagtcattg 6419742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 238
Target Start/End: Original strand, 2437459 - 2437497
Alignment:
Q  200 attgtcaattttctaaatattgtgcacatctttttaatt 238  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  2437459 attgtcaattttctaaatattgtgcaaatctttttaatt 2437497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 65
Target Start/End: Complemental strand, 30813346 - 30813304
Alignment:
Q  23 ctcatgtctccagatctgcaacgttgacgacaccaaagtcatt 65  Q
    ||||||||||| ||||||||||||||||||| |||||||||||    
T  30813346 ctcatgtctccggatctgcaacgttgacgacgccaaagtcatt 30813304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 254 - 291
Target Start/End: Complemental strand, 9353428 - 9353391
Alignment:
Q  254 tcaaatgagtcttcaactatttctccttcttcacctct 291  Q
    |||||||||||||||||||||||||| |||||||||||    
T  9353428 tcaaatgagtcttcaactatttctccctcttcacctct 9353391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 20496471 - 20496422
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgat 68  Q
    ||||| ||| |||| |||| ||||||||||||||||||||||||||||||    
T  20496471 aatacccatctctcaagatatgcaacgttgacgacaccaaagtcattgat 20496422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 19 - 66
Target Start/End: Original strand, 29920754 - 29920801
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattg 66  Q
    |||||||||||||||||||||| ||||||||||||   ||||||||||    
T  29920754 aatactcatgtctccagatctgtaacgttgacgacgataaagtcattg 29920801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 1418940 - 1419042
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaaca 118  Q
    |||| |||||||| | ||| |||| |||||||||| || ||||||||||||  |||| ||||||||  || | |||||| ||| || ||||| |||||||    
T  1418940 aataatcatgtcttcggatttgcagcgttgacgacgccgaagtcattgatcgaatctacacttgcttaaatctaatctttcaatctaaatcaaataaaca 1419039  T
Q  119 ccg 121  Q
    |||    
T  1419040 ccg 1419042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 238
Target Start/End: Complemental strand, 9353537 - 9353499
Alignment:
Q  200 attgtcaattttctaaatattgtgcacatctttttaatt 238  Q
    |||||||||||||||||||||||||| || |||||||||    
T  9353537 attgtcaattttctaaatattgtgcatatttttttaatt 9353499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 304
Target Start/End: Original strand, 14093513 - 14093561
Alignment:
Q  255 caaatgagtcttcaactatttctccttcttcacctcttatcagcagttcc 304  Q
    ||||||||| ||||||||||||||| ||||||||||| |||| |||||||    
T  14093513 caaatgagt-ttcaactatttctccctcttcacctctcatcatcagttcc 14093561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 128
Target Start/End: Original strand, 16328948 - 16329020
Alignment:
Q  56 caaagtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaacaccgcactaag 128  Q
    ||||||||||||| | || ||||||| ||| |||| |||||| |||||| ||||| |||||||| | ||||||    
T  16328948 caaagtcattgattaaatttgcacttactcaaaactaatctttcaacctaaatcaaataaacacaggactaag 16329020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 21507681 - 21507721
Alignment:
Q  26 atgtctccagatctgcaacgttgacgacaccaaagtcattg 66  Q
    |||||||| |||||| |||||||||||| ||||||||||||    
T  21507681 atgtctccggatctgtaacgttgacgacgccaaagtcattg 21507721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 77; Significance: 1e-35; HSPs: 74)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 5754566 - 5754454
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaaca 118  Q
    |||||| |||||||| |||||||||||||||||||||||||||||||||||  |||||||||||||| || | |||||| |||||||||||| |||||||    
T  5754566 aatacttatgtctccggatctgcaacgttgacgacaccaaagtcattgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaaca 5754467  T
Q  119 ccgcactaagacg 131  Q
    |||||||||||||    
T  5754466 ccgcactaagacg 5754454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 20 - 130
Target Start/End: Complemental strand, 4739612 - 4739496
Alignment:
Q  20 atactcatgtctccagatctgcaacgttgacgacaccaaagtcattg------atcatatctgcacttgctccaaacaaatcttccaacctgaatcatat 113  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||||      |||  |||||||||||||| |||| |||||| |||||||||||| ||    
T  4739612 atactcatgtctccggatctgcaacgttgacgacgccaaagtcattgtcattgatcggatctgcacttgctcaaaactaatctttcaacctgaatcaaat 4739513  T
Q  114 aaacaccgcactaagac 130  Q
    |||||||||||||||||    
T  4739512 aaacaccgcactaagac 4739496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 26 - 183
Target Start/End: Complemental strand, 32314719 - 32314556
Alignment:
Q  26 atgtctccagatctgcaacgttgacgacaccaaagt------cattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaacac 119  Q
    |||||||| ||||||||||||||||||| |||||||      ||||||||| |||||||||||||| || | |||||| |||||||||||| ||||||||    
T  32314719 atgtctccggatctgcaacgttgacgacgccaaagttattgtcattgatcagatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacac 32314620  T
Q  120 cgcactaagacgnnnnnnnnnnnncacaccacacaacgacgagaaatcaaaacaaatagagttc 183  Q
    ||||||||||||            |||||| ||||| ||||||||||||||||||| |||||||    
T  32314619 cgcactaagacgggaaataaaaaacacaccgcacaaagacgagaaatcaaaacaaacagagttc 32314556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 19 - 129
Target Start/End: Original strand, 6431245 - 6431355
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaaca 118  Q
    ||||||||||||| |||||||||||| |||||||| | |||||||||||||| |||||| ||||||| ||   |||||| |||||||||||| || ||||    
T  6431245 aatactcatgtcttcagatctgcaacattgacgacgcaaaagtcattgatcagatctgcgcttgctcaaagttaatctttcaacctgaatcaaatcaaca 6431344  T
Q  119 ccgcactaaga 129  Q
    |||||||||||    
T  6431345 ccgcactaaga 6431355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 24 - 131
Target Start/End: Original strand, 43473970 - 43474083
Alignment:
Q  24 tcatgtctccagatctgcaacgttgacgacaccaaagtca------ttgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaac 117  Q
    |||||||||||||||||||| ||||||||| |||||||||      ||||||| |||||||||||||| || | |||||| |||||||||||| ||||||    
T  43473970 tcatgtctccagatctgcaatgttgacgacgccaaagtcattgtcattgatcagatctgcacttgctcaaagctaatctttcaacctgaatcaaataaac 43474069  T
Q  118 accgcactaagacg 131  Q
    ||||||||||||||    
T  43474070 accgcactaagacg 43474083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 12890955 - 12891073
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaag------tcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    |||||||||||||| |||||| ||||||||||||||||||||      |||||||||  |||||||||||||| || | |||||| |||||||||||| |    
T  12890955 aatactcatgtctctagatctacaacgttgacgacaccaaagaaattgtcattgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaa 12891054  T
Q  113 taaacaccgcactaagacg 131  Q
    |||||||||||||| ||||    
T  12891055 taaacaccgcactaggacg 12891073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 11798365 - 11798478
Alignment:
Q  19 aatactcatgtctcc-agatctgcaacgttgacgacaccaaagtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaac 117  Q
    ||||||||||||||| | |||||||||||||||||| | |||||||||||||  |||| ||| ||||| || | |||||| |||||||||||| ||||||    
T  11798365 aatactcatgtctccgaaatctgcaacgttgacgacgcaaaagtcattgatcggatctacacctgctcaaagctaatctttcaacctgaatcaaataaac 11798464  T
Q  118 accgcactaagacg 131  Q
    | ||||||||||||    
T  11798465 atcgcactaagacg 11798478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 119
Target Start/End: Complemental strand, 15920152 - 15920052
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaaca 118  Q
    ||||||||||| ||| ||||||||||||||||||| |||||||||||||||  |||||||||||| | || | ||| || |||||||||||| |||||||    
T  15920152 aatactcatgtttccggatctgcaacgttgacgacgccaaagtcattgatcggatctgcacttgcacaaagctaatatttcaacctgaatcaaataaaca 15920053  T
Q  119 c 119  Q
    |    
T  15920052 c 15920052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 127
Target Start/End: Complemental strand, 34471244 - 34471136
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaaca 118  Q
    |||||||||||||| ||||||||||||||||| || ||||||||||||||   |||||||||||||| ||   |||||| |||| ||||||| ||||| |    
T  34471244 aatactcatgtctctagatctgcaacgttgacaacgccaaagtcattgattggatctgcacttgctcaaagttaatctttcaacatgaatcaaataaata 34471145  T
Q  119 ccgcactaa 127  Q
    |||||||||    
T  34471144 ccgcactaa 34471136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 9978506 - 9978624
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaa------gtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    ||||||||||||||| ||||||||||||||| ||| |||||      |||||||||   |||||||||||||| || | |||||| |||||||||||| |    
T  9978506 aatactcatgtctccggatctgcaacgttgatgacgccaaaatcattgtcattgattggatctgcacttgctcaaagctaatctttcaacctgaatcaaa 9978605  T
Q  113 taaacaccgcactaagacg 131  Q
    |||||||||||||||||||    
T  9978606 taaacaccgcactaagacg 9978624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 10286844 - 10286962
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattg------atcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    ||||||||||||||| |||||||||||||||| ||  |||||||||||      |||  |||||||||||||| || | |||||| |||||||||||| |    
T  10286844 aatactcatgtctccggatctgcaacgttgacaacgtcaaagtcattgtcattgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaa 10286943  T
Q  113 taaacaccgcactaagacg 131  Q
    |||||||||||||||||||    
T  10286944 taaacaccgcactaagacg 10286962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 28230934 - 28231052
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattg------atcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    |||| |||||||||||||||||||| ||||||||| ||||||||||||      |||  |||||||||||||| || |  ||||| |||||||||||| |    
T  28230934 aatattcatgtctccagatctgcaatgttgacgacgccaaagtcattgtcattgatcggatctgcacttgctcaaagctgatctttcaacctgaatcaaa 28231033  T
Q  113 taaacaccgcactaagacg 131  Q
    |||||||||||||||||||    
T  28231034 taaacaccgcactaagacg 28231052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 32015537 - 32015419
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattga------tcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    |||| |||||||||||||||||||||||||||||  |||||||||||||      ||  |||||||||||||| |||| |||||| |||||||||||| |    
T  32015537 aatattcatgtctccagatctgcaacgttgacgatgccaaagtcattgacattgatcggatctgcacttgctcaaaactaatctttcaacctgaatcaaa 32015438  T
Q  113 taaacaccgcactaagacg 131  Q
    |||||| || |||||||||    
T  32015437 taaacatcgtactaagacg 32015419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 38535142 - 38535260
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcatt------gatcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||      ||||  | |||||||||||| || | |||||| |||||||||||| |    
T  38535142 aatactcatgtatctagatctgcaacgttgacgacaccaaagtcattgtcatggatcgaacctgcacttgctcaaagctaatctttcaacctgaatcaaa 38535241  T
Q  113 taaacaccgcactaagacg 131  Q
    |||||||||||||| ||||    
T  38535242 taaacaccgcactaggacg 38535260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 24 - 131
Target Start/End: Original strand, 28261730 - 28261843
Alignment:
Q  24 tcatgtctccagatctgcaacgttgacgacaccaaagt------cattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaac 117  Q
    |||||||||| ||||||||||||||||||| | |||||      ||||||||  |||||| ||||||| |||| |||||| |||||||||||| ||||||    
T  28261730 tcatgtctccggatctgcaacgttgacgacgcgaaagttattgtcattgatcggatctgctcttgctcaaaactaatctttcaacctgaatcaaataaac 28261829  T
Q  118 accgcactaagacg 131  Q
    ||||||||||||||    
T  28261830 accgcactaagacg 28261843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 23 - 131
Target Start/End: Original strand, 34962917 - 34963031
Alignment:
Q  23 ctcatgtctccagatctgcaacgttgacgacaccaaagtcattgatcat-------atctgcacttgctccaaacaaatcttccaacctgaatcatataa 115  Q
    ||||||||| | ||||||||||||||||||| |||||||||||| ||||       |||||||||||||| || | |||||| |||||||||||| ||||    
T  34962917 ctcatgtcttcggatctgcaacgttgacgacgccaaagtcattg-tcattgataggatctgcacttgctcaaatctaatctttcaacctgaatcaaataa 34963015  T
Q  116 acaccgcactaagacg 131  Q
    ||||||||||||||||    
T  34963016 acaccgcactaagacg 34963031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 36868292 - 36868174
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgatcat-------atctgcacttgctccaaacaaatcttccaacctgaatcat 111  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||| ||||       || ||||||||||| ||   |||||| ||||||||||||     
T  36868292 aatactcatgtctcctgatctgcaacgttgacgacgccaaagtcattg-tcattgaacggatttgcacttgctcaaagttaatctttcaacctgaatcaa 36868194  T
Q  112 ataaacaccgcactaagacg 131  Q
    ||||||||||||||||||||    
T  36868193 ataaacaccgcactaagacg 36868174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 35333789 - 35333671
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattg------atcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    ||||||||||||||| ||||||||||||||| |||  |||||||||||      |||  |||| ||||||||| || | |||||| |||||||||||| |    
T  35333789 aatactcatgtctccggatctgcaacgttgatgacgtcaaagtcattgtcattgatcggatctacacttgctcaaagctaatctttcaacctgaatcaaa 35333690  T
Q  113 taaacaccgcactaagacg 131  Q
    |||||||||||||||||||    
T  35333689 taaacaccgcactaagacg 35333671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 44942570 - 44942452
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattg------atcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    ||||||||||||| | ||||||||||||||||||| ||||||||||||      |||  || ||||||||||| || | |||||| ||| |||||||| |    
T  44942570 aatactcatgtcttcggatctgcaacgttgacgacgccaaagtcattgtcattgatcggatttgcacttgctcaaagctaatctttcaagctgaatcaaa 44942471  T
Q  113 taaacaccgcactaagacg 131  Q
    |||||||||||||||||||    
T  44942470 taaacaccgcactaagacg 44942452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 19 - 129
Target Start/End: Original strand, 17767403 - 17767513
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaaca 118  Q
    ||||||||||||||| ||||||||||||||||||| |  ||||||||||||  |||||||||||||| ||   ||||||  ||||| ||||| |||| ||    
T  17767403 aatactcatgtctccggatctgcaacgttgacgacgcagaagtcattgatcggatctgcacttgctcaaagttaatcttttaacctaaatcaaataagca 17767502  T
Q  119 ccgcactaaga 129  Q
    ||| |||||||    
T  17767503 ccgtactaaga 17767513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 35 - 129
Target Start/End: Original strand, 20124628 - 20124722
Alignment:
Q  35 gatctgcaacgttgacgacaccaaagtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaacaccgcactaaga 129  Q
    |||||| |||||||||||| |||||||||||||||  || ||||||||||| || | |||||| |||||||||| | ||||||||| ||||||||    
T  20124628 gatctgaaacgttgacgacgccaaagtcattgatcgaatttgcacttgctcaaagctaatctttcaacctgaatgaaataaacaccacactaaga 20124722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 31908654 - 31908770
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaa------gtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    |||||| |||||||| ||||||||||||||||||| |||||      ||||||||||  |||||||||||||| || | || ||| |||||||||||| |    
T  31908654 aatacttatgtctccggatctgcaacgttgacgacgccaaagtcattgtcattgatcggatctgcacttgctcaaagctaa-ctttcaacctgaatcaaa 31908752  T
Q  113 taaacaccgcactaagac 130  Q
    ||||||||||||||||||    
T  31908753 taaacaccgcactaagac 31908770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 43696152 - 43696035
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattg------atcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    ||||||||||||| | ||||||||||||||| ||| ||||||||||||      |||| ||||||||||| || || | ||| || |||||||||||| |    
T  43696152 aatactcatgtcttcggatctgcaacgttgatgacgccaaagtcattgtcattgatcagatctgcacttgttcaaagctaatttttcaacctgaatcaaa 43696053  T
Q  113 taaacaccgcactaagac 130  Q
    ||||||||||||||||||    
T  43696052 taaacaccgcactaagac 43696035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 127
Target Start/End: Original strand, 11580973 - 11581081
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaaca 118  Q
    ||||||||||| ||| ||||||||||||||||||||| ||| ||||||||   || |||||||| |  || | |||||| |||||||||||| ||||| |    
T  11580973 aatactcatgtttccggatctgcaacgttgacgacacaaaaatcattgattgaatttgcacttgatgaaacctaatctttcaacctgaatcaaataaata 11581072  T
Q  119 ccgcactaa 127  Q
    |||||||||    
T  11581073 ccgcactaa 11581081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 4732354 - 4732236
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaa------gtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    ||||||||||||||| ||||||||||||||||||| | |||      ||||||||||  |||| ||||||||| ||   |||||| |||| ||||||| |    
T  4732354 aatactcatgtctccggatctgcaacgttgacgacgctaaagtcattgtcattgatcggatctacacttgctcaaagataatctttcaacttgaatcaaa 4732255  T
Q  113 taaacaccgcactaagacg 131  Q
    |||||||||||||||||||    
T  4732254 taaacaccgcactaagacg 4732236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 19 - 66
Target Start/End: Complemental strand, 11942652 - 11942605
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattg 66  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  11942652 aatactcatgtctccagatctgcaacgttgacgacgccaaagtcattg 11942605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 12704971 - 12704853
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattg------atcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    |||||||||||||||  ||||||| |||||||||| ||||||||||||      |||  || ||||||||||| || | |||||| |||||| ||||| |    
T  12704971 aatactcatgtctccgaatctgcagcgttgacgacgccaaagtcattgtgattgatctgatatgcacttgctcaaagctaatctttcaacctaaatcaaa 12704872  T
Q  113 taaacaccgcactaagacg 131  Q
    |||||||||||||||||||    
T  12704871 taaacaccgcactaagacg 12704853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 23 - 131
Target Start/End: Original strand, 38384298 - 38384412
Alignment:
Q  23 ctcatgtctccagatctgcaacgttgacgacaccaaagt------cattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaa 116  Q
    ||||||||||| ||||||||| ||||| ||| |||||||      ||||||||  |||||||||||||| || | |||||| |||||||||| | |||||    
T  38384298 ctcatgtctccggatctgcaatgttgatgacgccaaagttattgtcattgatcggatctgcacttgctcaaagctaatctttcaacctgaataaaataaa 38384397  T
Q  117 caccgcactaagacg 131  Q
    |||||||||||||||    
T  38384398 caccgcactaagacg 38384412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 24 - 131
Target Start/End: Original strand, 18089239 - 18089352
Alignment:
Q  24 tcatgtctccagatctgcaacgttgacgacaccaaagtcattg------atcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaac 117  Q
    |||||||||| ||||||||||| ||||||  ||||||||||||      |||  |||||||||||||| || | |||||| |||| ||||||| ||||||    
T  18089239 tcatgtctccggatctgcaacgctgacgaagccaaagtcattgtcattgatcggatctgcacttgctcaaagctaatctttcaacttgaatcaaataaac 18089338  T
Q  118 accgcactaagacg 131  Q
    ||||||||||||||    
T  18089339 accgcactaagacg 18089352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 19 - 129
Target Start/End: Original strand, 20560969 - 20561085
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattg------atcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    ||||| ||||||||| ||| ||||||||||||||| ||||||||||||      |||  |||| | ||||||| || | |||||| |||||||||||| |    
T  20560969 aatacccatgtctccggatttgcaacgttgacgacgccaaagtcattgtcattgatcggatctactcttgctcaaagctaatctttcaacctgaatcaaa 20561068  T
Q  113 taaacaccgcactaaga 129  Q
    |||||||||||||||||    
T  20561069 taaacaccgcactaaga 20561085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 40039151 - 40039263
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaaca 118  Q
    |||| |||||| ||| ||||||||||||||| ||  | ||||||||||||   ||||||||||| || | || ||| || |||||||||| | |||||||    
T  40039151 aatagtcatgtttccggatctgcaacgttgatgatgcaaaagtcattgattgaatctgcacttgatcaatactaatttttcaacctgaataaaataaaca 40039250  T
Q  119 ccgcactaagacg 131  Q
    |||||||||||||    
T  40039251 ccgcactaagacg 40039263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 72 - 131
Target Start/End: Original strand, 4426554 - 4426613
Alignment:
Q  72 atctgcacttgctccaaacaaatcttccaacctgaatcatataaacaccgcactaagacg 131  Q
    |||||||||||||| || | |||||| |||||||||||| ||||||||||||||||||||    
T  4426554 atctgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcactaagacg 4426613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 130
Target Start/End: Original strand, 7072790 - 7072902
Alignment:
Q  24 tcatgtctccagatctgcaacgttgacgacaccaaagtcattgatcat-------atctgcacttgctccaaacaaatcttccaacctgaatcatataaa 116  Q
    |||||||||| ||||||||||||||||||| |||||||||||| ||||       || ||||||| ||| |||| ||| || | |||||||||| |||||    
T  7072790 tcatgtctccggatctgcaacgttgacgacgccaaagtcattg-tcattgattggatttgcacttcctcaaaactaatatttcgacctgaatcaaataaa 7072888  T
Q  117 caccgcactaagac 130  Q
    ||||||||||||||    
T  7072889 caccgcactaagac 7072902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 22597419 - 22597301
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcatt------gatcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    ||||||||||||||  |||||||||| |||||||   ||||||||||      ||||  | |||||||||||| || | |||||| |||||||||||| |    
T  22597419 aatactcatgtctctggatctgcaacattgacgatgtcaaagtcattatcattgatcggacctgcacttgctcaaagctaatctttcaacctgaatcaaa 22597320  T
Q  113 taaacaccgcactaagacg 131  Q
    |||||||||||||||||||    
T  22597319 taaacaccgcactaagacg 22597301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 21 - 120
Target Start/End: Original strand, 13878848 - 13878953
Alignment:
Q  21 tactcatgtctccagatctgcaacgttgacgacaccaaa------gtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatata 114  Q
    |||||||||| || ||||||||||||||||||| |||||      ||||||||||  |||||||||||||| ||   |||||| |||||||||||| |||    
T  13878848 tactcatgtccccggatctgcaacgttgacgacgccaaagtcattgtcattgatcggatctgcacttgctcaaagttaatctttcaacctgaatcaaata 13878947  T
Q  115 aacacc 120  Q
    ||||||    
T  13878948 aacacc 13878953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 21 - 120
Target Start/End: Original strand, 14018973 - 14019078
Alignment:
Q  21 tactcatgtctccagatctgcaacgttgacgacaccaaa------gtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatata 114  Q
    |||||||||| || ||||||||||||||||||| |||||      ||||||||||  |||||||||||||| ||   |||||| |||||||||||| |||    
T  14018973 tactcatgtccccggatctgcaacgttgacgacgccaaagtcattgtcattgatcggatctgcacttgctcaaagttaatctttcaacctgaatcaaata 14019072  T
Q  115 aacacc 120  Q
    ||||||    
T  14019073 aacacc 14019078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 129
Target Start/End: Original strand, 45694289 - 45694399
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaaca 118  Q
    |||| |||||||| | |||||||||||||||||||   |||||||||||| | ||||||| |||||| ||   |||||| |||| ||| ||| |||||||    
T  45694289 aatattcatgtcttcggatctgcaacgttgacgacgttaaagtcattgattagatctgcatttgctcaaagataatctttcaacatgagtcaaataaaca 45694388  T
Q  119 ccgcactaaga 129  Q
    ||| |||||||    
T  45694389 ccgtactaaga 45694399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 29734468 - 29734419
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgat 68  Q
    ||||||||||||||| ||||| ||||||||||||| ||||||||||||||    
T  29734468 aatactcatgtctccggatcttcaacgttgacgactccaaagtcattgat 29734419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 37883931 - 37883882
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgat 68  Q
    |||||||||||||||  |||||||||||||||||| ||||||||||||||    
T  37883931 aatactcatgtctccgtatctgcaacgttgacgactccaaagtcattgat 37883882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 29543077 - 29542958
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaa------gtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    ||||| ||||||||| ||||||||||||||| ||| |||||      ||||||||||  || ||||||||||| || | ||| || |||||||||||| |    
T  29543077 aatacccatgtctccggatctgcaacgttgatgacgccaaaatcattgtcattgatcggatttgcacttgctcaaagctaatttttcaacctgaatcaaa 29542978  T
Q  113 t-aaacaccgcactaagacg 131  Q
    | ||||||||||||||||||    
T  29542977 taaaacaccgcactaagacg 29542958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 60 - 131
Target Start/End: Original strand, 4604191 - 4604262
Alignment:
Q  60 gtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaacaccgcactaagacg 131  Q
    ||||||||||  |||||||||||||| || | | |||| |||||||||||| ||||||||| ||||||||||    
T  4604191 gtcattgatcggatctgcacttgctcaaagctagtctttcaacctgaatcaaataaacaccacactaagacg 4604262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 9689822 - 9689940
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattg------atcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    |||||| |||||||| ||||||||| | ||||||| ||||||||||||      |||  || ||||||||||| ||   |||||| |||||||||||| |    
T  9689822 aatacttatgtctccggatctgcaatgctgacgacgccaaagtcattgtcattgatcggatatgcacttgctcaaagttaatctttcaacctgaatcaaa 9689921  T
Q  113 taaacaccgcactaagacg 131  Q
    ||||||||||||| |||||    
T  9689922 taaacaccgcactgagacg 9689940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 25 - 68
Target Start/End: Original strand, 15673810 - 15673853
Alignment:
Q  25 catgtctccagatctgcaacgttgacgacaccaaagtcattgat 68  Q
    |||||||||||||||||||| |||||||| ||||||||||||||    
T  15673810 catgtctccagatctgcaacattgacgactccaaagtcattgat 15673853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 25 - 68
Target Start/End: Complemental strand, 26491573 - 26491530
Alignment:
Q  25 catgtctccagatctgcaacgttgacgacaccaaagtcattgat 68  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||    
T  26491573 catgtctccggatctgcaacgttgacgactccaaagtcattgat 26491530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 33012332 - 33012214
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattg------atcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    ||||||||| ||||| ||| ||||||||||||||| ||||| ||||||      |||  || |||||||| || || | |||||| |||||||||| | |    
T  33012332 aatactcatatctccggatatgcaacgttgacgacgccaaaatcattgtcgttgatcggatttgcacttgatcaaagctaatctttcaacctgaattaaa 33012233  T
Q  113 taaacaccgcactaagacg 131  Q
    |||||||||||||||||||    
T  33012232 taaacaccgcactaagacg 33012214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 115
Target Start/End: Original strand, 34416600 - 34416702
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaa------gtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    ||||||||||||||| ||||||||| |||||||||  ||||      ||||||||||  |||||||||||||| || | |||||| |||||||||||| |    
T  34416600 aatactcatgtctccggatctgcaatgttgacgacgtcaaagtcattgtcattgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaa 34416699  T
Q  113 taa 115  Q
    |||    
T  34416700 taa 34416702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 41797875 - 41797760
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgatcat-------atctgcacttgctccaaacaaatcttccaacctgaatcat 111  Q
    ||||||||||||| | ||||||||||||||||||  |||||||||||| ||||       |||||||||||||| || | ||||||   ||||||||||     
T  41797875 aatactcatgtcttcggatctgcaacgttgacgatgccaaagtcattg-tcattgaacggatctgcacttgctcaaagctaatctt---acctgaatcaa 41797780  T
Q  112 ataaacaccgcactaagacg 131  Q
    ||||||||| ||||||||||    
T  41797779 ataaacaccacactaagacg 41797760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 234
Target Start/End: Original strand, 3309574 - 3309608
Alignment:
Q  200 attgtcaattttctaaatattgtgcacatcttttt 234  Q
    |||||||||||||||||||||||||||||||||||    
T  3309574 attgtcaattttctaaatattgtgcacatcttttt 3309608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 254 - 304
Target Start/End: Complemental strand, 21252922 - 21252872
Alignment:
Q  254 tcaaatgagtcttcaactatttctccttcttcacctcttatcagcagttcc 304  Q
    ||||||||||||||||||||| |||| ||||||||||| ||||||| ||||    
T  21252922 tcaaatgagtcttcaactattgctccatcttcacctctcatcagcaattcc 21252872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 238
Target Start/End: Original strand, 29408495 - 29408533
Alignment:
Q  200 attgtcaattttctaaatattgtgcacatctttttaatt 238  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  29408495 attgtcaattttataaatattgtgcacatctttttaatt 29408533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 238
Target Start/End: Original strand, 45273041 - 45273079
Alignment:
Q  200 attgtcaattttctaaatattgtgcacatctttttaatt 238  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  45273041 attgtcaattttctaaatattgtgcacatcttttaaatt 45273079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 2763364 - 2763413
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgat 68  Q
    ||||||||||||| | |||||||||||||||| ||| |||||||||||||    
T  2763364 aatactcatgtcttcggatctgcaacgttgacaacaacaaagtcattgat 2763413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 11550431 - 11550480
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgat 68  Q
    ||||| ||||||| | ||||||||||||||||||| ||||||||||||||    
T  11550431 aatacccatgtcttcggatctgcaacgttgacgacgccaaagtcattgat 11550480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 35 - 82
Target Start/End: Original strand, 802940 - 802987
Alignment:
Q  35 gatctgcaacgttgacgacaccaaagtcattgatcatatctgcacttg 82  Q
    ||||| |||| ||||||||||||||||||||||| | |||||||||||    
T  802940 gatctacaactttgacgacaccaaagtcattgattagatctgcacttg 802987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 19 - 66
Target Start/End: Original strand, 8027840 - 8027887
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattg 66  Q
    ||||||||||||| |||||||| ||| |||||||||||||||| ||||    
T  8027840 aatactcatgtcttcagatctgtaacattgacgacaccaaagttattg 8027887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 19 - 126
Target Start/End: Complemental strand, 11426921 - 11426814
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaaca 118  Q
    ||||||||||||| | |||||||||| ||||||||  |||||| || ||| | ||||||| |||||| || | |||||| |||| ||||| | ||||| |    
T  11426921 aatactcatgtcttcggatctgcaacattgacgacgtcaaagtgatcgattagatctgcaattgctcaaagctaatctttcaacttgaatgaaataaata 11426822  T
Q  119 ccgcacta 126  Q
     |||||||    
T  11426821 tcgcacta 11426814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 35 - 130
Target Start/End: Original strand, 13548760 - 13548855
Alignment:
Q  35 gatctgcaacgttgacgacaccaaagtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaacaccgcactaagac 130  Q
    |||||||||||||||| |  | ||||||||||||   ||||||| ||| || || | |||||| |||||||||||| ||||| |||||| ||||||    
T  13548760 gatctgcaacgttgacaatgcaaaagtcattgattgaatctgcatttgatcaaagctaatctttcaacctgaatcaaataaaaaccgcattaagac 13548855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 25 - 68
Target Start/End: Original strand, 19580844 - 19580887
Alignment:
Q  25 catgtctccagatctgcaacgttgacgacaccaaagtcattgat 68  Q
    ||||||||| |||||||||||||||| || ||||||||||||||    
T  19580844 catgtctccggatctgcaacgttgacaactccaaagtcattgat 19580887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 27 - 66
Target Start/End: Complemental strand, 25068126 - 25068087
Alignment:
Q  27 tgtctccagatctgcaacgttgacgacaccaaagtcattg 66  Q
    ||||||| ||||||||||||||||||| ||||||||||||    
T  25068126 tgtctccggatctgcaacgttgacgacgccaaagtcattg 25068087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 254 - 297
Target Start/End: Complemental strand, 41541396 - 41541353
Alignment:
Q  254 tcaaatgagtcttcaactatttctccttcttcacctcttatcag 297  Q
    |||||||||||||||||||||||||| | ||||||||| |||||    
T  41541396 tcaaatgagtcttcaactatttctcccttttcacctctcatcag 41541353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 19 - 82
Target Start/End: Original strand, 43929136 - 43929199
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgatcatatctgcacttg 82  Q
    |||| |||||||||| |||||||||||| || ||| ||||||||||||||   |||||||||||    
T  43929136 aatagtcatgtctccggatctgcaacgtggatgacgccaaagtcattgattgaatctgcacttg 43929199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 238
Target Start/End: Complemental strand, 1397871 - 1397833
Alignment:
Q  200 attgtcaattttctaaatattgtgcacatctttttaatt 238  Q
    |||||||| ||| ||||||||||||||||||||||||||    
T  1397871 attgtcaactttttaaatattgtgcacatctttttaatt 1397833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 238
Target Start/End: Complemental strand, 4317004 - 4316966
Alignment:
Q  200 attgtcaattttctaaatattgtgcacatctttttaatt 238  Q
    ||||||||||||||||||| ||||||||| |||||||||    
T  4317004 attgtcaattttctaaatagtgtgcacatttttttaatt 4316966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 238
Target Start/End: Complemental strand, 11084273 - 11084235
Alignment:
Q  200 attgtcaattttctaaatattgtgcacatctttttaatt 238  Q
    |||||||||||| |||||||||||||||||| |||||||    
T  11084273 attgtcaattttttaaatattgtgcacatctctttaatt 11084235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 238
Target Start/End: Original strand, 16806260 - 16806298
Alignment:
Q  200 attgtcaattttctaaatattgtgcacatctttttaatt 238  Q
    |||||||||||||||||||||||| |||||| |||||||    
T  16806260 attgtcaattttctaaatattgtggacatctatttaatt 16806298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 238
Target Start/End: Original strand, 16845541 - 16845579
Alignment:
Q  200 attgtcaattttctaaatattgtgcacatctttttaatt 238  Q
    |||||||||||||||||||||||| |||||| |||||||    
T  16845541 attgtcaattttctaaatattgtggacatctatttaatt 16845579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 85
Target Start/End: Complemental strand, 20570251 - 20570185
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgatcatatctgcacttgctc 85  Q
    |||| |||||||||| |||||| |||||| ||||| | ||||||| |||||  ||||||||||||||    
T  20570251 aatattcatgtctccggatctgtaacgttaacgacgcaaaagtcaatgatcggatctgcacttgctc 20570185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 34480243 - 34480197
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcatt 65  Q
    ||||||||||||||| |||||||||||| || ||| |||||||||||    
T  34480243 aatactcatgtctccggatctgcaacgtggatgacgccaaagtcatt 34480197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 68
Target Start/End: Complemental strand, 10589365 - 10589324
Alignment:
Q  27 tgtctccagatctgcaacgttgacgacaccaaagtcattgat 68  Q
    ||||||| ||||||||||||||| ||| ||||||||||||||    
T  10589365 tgtctccggatctgcaacgttgatgactccaaagtcattgat 10589324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 19686249 - 19686298
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgat 68  Q
    |||||||| | ||| ||||||||||||||||| ||| |||||||||||||    
T  19686249 aatactcacgactctagatctgcaacgttgacaacatcaaagtcattgat 19686298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 20036660 - 20036611
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgat 68  Q
    ||||| ||||||| | ||||||||||||||||| | ||||||||||||||    
T  20036660 aatacccatgtcttcggatctgcaacgttgacggcgccaaagtcattgat 20036611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 25237167 - 25237216
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgat 68  Q
    |||||||||||||||  || ||||||||||||||| | ||||||||||||    
T  25237167 aatactcatgtctccgaatttgcaacgttgacgactcaaaagtcattgat 25237216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 12366146 - 12366098
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattga 67  Q
    ||||||||||||||| |||||||||| |||  ||| |||||||||||||    
T  12366146 aatactcatgtctccggatctgcaacattggtgactccaaagtcattga 12366098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 59
Target Start/End: Complemental strand, 16136362 - 16136322
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaa 59  Q
    |||||||||||||||  |||||||||||||||||| |||||    
T  16136362 aatactcatgtctccgaatctgcaacgttgacgacgccaaa 16136322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 73; Significance: 2e-33; HSPs: 70)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 32878986 - 32878874
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaaca 118  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||||||  |||||||||||||| || | |||||| |||||||||||| |||||||    
T  32878986 aatactcatgtctccggatctacaacgttgacgacaccaaagtcattgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaaca 32878887  T
Q  119 ccgcactaagacg 131  Q
    ||| |||||||||    
T  32878886 ccgtactaagacg 32878874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 19 - 129
Target Start/End: Original strand, 9298259 - 9298369
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaaca 118  Q
    ||||||||| ||||| |||||||| |||||||||  |||||||||||||||  |||||||||||||| ||   |||||| |||||||||||| |||||||    
T  9298259 aatactcatatctccggatctgcatcgttgacgatgccaaagtcattgatcggatctgcacttgctcaaagttaatctttcaacctgaatcaaataaaca 9298358  T
Q  119 ccgcactaaga 129  Q
    |||||||||||    
T  9298359 ccgcactaaga 9298369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 19 - 129
Target Start/End: Complemental strand, 12871899 - 12871789
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaaca 118  Q
    ||||||||||||||  ||||||||||||||||||  |||||||||||||||  |||||||||||||| || | |||||| |||||| ||||| |||||||    
T  12871899 aatactcatgtctctggatctgcaacgttgacgatgccaaagtcattgatcgaatctgcacttgctcaaagctaatctttcaacctaaatcaaataaaca 12871800  T
Q  119 ccgcactaaga 129  Q
     ||||||||||    
T  12871799 acgcactaaga 12871789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 42491171 - 42491059
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaaca 118  Q
    ||||||||||||| | |||||||||| ||||||||  ||| ||||||||||  |||||||||||||| || | |||||| ||| |||||||| |||||||    
T  42491171 aatactcatgtcttcggatctgcaacattgacgacgtcaacgtcattgatctgatctgcacttgctcaaagctaatctttcaatctgaatcaaataaaca 42491072  T
Q  119 ccgcactaagacg 131  Q
    |||||||||||||    
T  42491071 ccgcactaagacg 42491059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 15391089 - 15391207
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaa------gtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    ||||||||||||||||||||||||||||||||||| |||||      ||||||||||  || ||||||||||| ||   |||||| |||||||||||| |    
T  15391089 aatactcatgtctccagatctgcaacgttgacgacgccaaagtcattgtcattgatcggatatgcacttgctcaaagataatctttcaacctgaatcaaa 15391188  T
Q  113 taaacaccgcactaagacg 131  Q
    |||||||||||||||||||    
T  15391189 taaacaccgcactaagacg 15391207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 28677967 - 28678085
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaa------gtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    |||||||||||||||| ||||||||||||||||||||||||      ||||||||||  |||||||||||||| || | ||| || |||||||||||| |    
T  28677967 aatactcatgtctccatatctgcaacgttgacgacaccaaagtcattgtcattgatcggatctgcacttgctcaaagctaatttttcaacctgaatcaaa 28678066  T
Q  113 taaacaccgcactaagacg 131  Q
    |||||||||||||| ||||    
T  28678067 taaacaccgcactaggacg 28678085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 14265568 - 14265450
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattg------atcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    ||||||||||||||| |||||||||||||||| || ||||||||||||      |||  |||||||||||||| || | |||||| |||||||||||| |    
T  14265568 aatactcatgtctccggatctgcaacgttgacaacgccaaagtcattgtcattgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaa 14265469  T
Q  113 taaacaccgcactaagacg 131  Q
    |||||| ||||||||||||    
T  14265468 taaacatcgcactaagacg 14265450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 45750762 - 45750644
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattg------atcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    ||||||||||||||| ||||||||||||||| ||| ||||||||||||      |||  |||||||||||||  || | |||||| |||||||||||| |    
T  45750762 aatactcatgtctccggatctgcaacgttgatgacgccaaagtcattgtcattgatcggatctgcacttgctaaaagctaatctttcaacctgaatcaaa 45750663  T
Q  113 taaacaccgcactaagacg 131  Q
    |||||||||||||||||||    
T  45750662 taaacaccgcactaagacg 45750644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 24 - 131
Target Start/End: Complemental strand, 3233067 - 3232954
Alignment:
Q  24 tcatgtctccagatctgcaacgttgacgacaccaaagtc------attgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaac 117  Q
    |||||||||| ||||||||||||||||||||||||||||      |||||||  |||||||||| ||| || | |||||| |||||||||||| ||||||    
T  3233067 tcatgtctccggatctgcaacgttgacgacaccaaagtcattgtcattgatcggatctgcactttctcaaagctaatctttcaacctgaatcaaataaac 3232968  T
Q  118 accgcactaagacg 131  Q
    | ||||||||||||    
T  3232967 atcgcactaagacg 3232954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 129
Target Start/End: Complemental strand, 42276639 - 42276523
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattg------atcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    |||||||||||||||  |||||||||||||||||| ||||||||||||      |||  |||||||||||||  || | |||||| |||||||||||| |    
T  42276639 aatactcatgtctccgaatctgcaacgttgacgacgccaaagtcattgtcattgatcggatctgcacttgcttaaagctaatctttcaacctgaatcaaa 42276540  T
Q  113 taaacaccgcactaaga 129  Q
    |||||||||||||||||    
T  42276539 taaacaccgcactaaga 42276523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 44517432 - 44517313
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaa-------gtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcat 111  Q
    ||||||||||||||| ||||||||||||||||||| |||||       ||||||||||  || ||||||||||| ||   |||||| ||||||||||||     
T  44517432 aatactcatgtctccggatctgcaacgttgacgacgccaaaagtcattgtcattgatcggatttgcacttgctcaaagttaatctttcaacctgaatcaa 44517333  T
Q  112 ataaacaccgcactaagacg 131  Q
    ||||||||||||||||||||    
T  44517332 ataaacaccgcactaagacg 44517313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 47551373 - 47551261
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaaca 118  Q
    ||||||||||| ||| |||||||||||||||||||  |||||||||||||   |||||||||||||| || | |||||| |||||| |||||  ||||||    
T  47551373 aatactcatgtttccggatctgcaacgttgacgacgtcaaagtcattgattggatctgcacttgctcaaagctaatctttcaacctaaatcaattaaaca 47551274  T
Q  119 ccgcactaagacg 131  Q
    | ||||| |||||    
T  47551273 cagcactgagacg 47551261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 32784363 - 32784245
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtc------attgatcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    ||||||||||||||| ||||||||||||||||||| | ||||||      |||||||  || ||||||||||| || | |||||| || ||||||||| |    
T  32784363 aatactcatgtctccggatctgcaacgttgacgacgctaaagtcattgttattgatcgaatttgcacttgctcaaagctaatctttcagcctgaatcaaa 32784264  T
Q  113 taaacaccgcactaagacg 131  Q
    |||||||||||||||||||    
T  32784263 taaacaccgcactaagacg 32784245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 45193465 - 45193583
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaa------gtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    ||||||||||||||| ||||||||||||||||||| |||||      ||||||||||  ||| |||||||||| || | |||||| |||||||| ||| |    
T  45193465 aatactcatgtctccggatctgcaacgttgacgacgccaaaatcattgtcattgatcggatcagcacttgctcaaagctaatctttcaacctgattcaaa 45193564  T
Q  113 taaacaccgcactaagacg 131  Q
    ||||||||| |||||||||    
T  45193565 taaacaccgtactaagacg 45193583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 24 - 131
Target Start/End: Original strand, 37822188 - 37822300
Alignment:
Q  24 tcatgtctccagatctgcaacgttgacgacaccaaa------gtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaac 117  Q
    |||||||||| |||||||||||||||||||||||||      ||||||||||  ||||||||||||| ||||  |||||| |||||||||||| |||||     
T  37822188 tcatgtctccggatctgcaacgttgacgacaccaaagacattgtcattgatcggatctgcacttgct-caaagtaatctttcaacctgaatcaaataaat 37822286  T
Q  118 accgcactaagacg 131  Q
    || |||||||||||    
T  37822287 actgcactaagacg 37822300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 24 - 130
Target Start/End: Original strand, 4882201 - 4882313
Alignment:
Q  24 tcatgtctccagatctgcaacgttgacgacaccaaagtcatt------gatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaac 117  Q
    |||||||||| ||||||||||||||||||  |||||||||||      ||||  |||||||||||||| || | |||||| |||| ||||||| ||||||    
T  4882201 tcatgtctccggatctgcaacgttgacgatgccaaagtcattatcattgatcggatctgcacttgctcaaagctaatctttcaacttgaatcaaataaac 4882300  T
Q  118 accgcactaagac 130  Q
    |||||||||||||    
T  4882301 accgcactaagac 4882313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 22 - 131
Target Start/End: Original strand, 26097851 - 26097960
Alignment:
Q  22 actcatgtctccagatctgcaacgttgacgacaccaaagtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaacaccg 121  Q
    |||||||||||| ||||||||| ||||||||| | ||||||||| ||   |||||||||||||| || | ||| || |||||||||||| ||||| ||||    
T  26097851 actcatgtctccggatctgcaatgttgacgacgcaaaagtcattaatggaatctgcacttgctcaaagctaatttttcaacctgaatcaaataaataccg 26097950  T
Q  122 cactaagacg 131  Q
     |||||||||    
T  26097951 tactaagacg 26097960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 23 - 131
Target Start/End: Original strand, 13488377 - 13488491
Alignment:
Q  23 ctcatgtctccagatctgcaacgttgacgacaccaaa------gtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaa 116  Q
    |||||||||||||| |||||||||||||||| |||||      ||||||||||  |||||| |||| || || | |||||| |||||||||| | |||||    
T  13488377 ctcatgtctccagacctgcaacgttgacgacgccaaagtcattgtcattgatcggatctgctcttgttcaaagctaatctttcaacctgaattaaataaa 13488476  T
Q  117 caccgcactaagacg 131  Q
    |||||||||||||||    
T  13488477 caccgcactaagacg 13488491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 23 - 131
Target Start/End: Complemental strand, 18343892 - 18343779
Alignment:
Q  23 ctcatgtctccagatctgcaacgttgacgacaccaaagtc------attgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaa 116  Q
    ||||||||||| ||||||||||||||||||| ||||||||      |||||||  |||||| |||| || || | |||||| |||||||||||| |||||    
T  18343892 ctcatgtctccggatctgcaacgttgacgacgccaaagtcattgtcattgatcggatctgctcttgttcaaagctaatctttcaacctgaatca-ataaa 18343794  T
Q  117 caccgcactaagacg 131  Q
    |||||||||||||||    
T  18343793 caccgcactaagacg 18343779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 19 - 129
Target Start/End: Original strand, 4870870 - 4870986
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattg------atcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    ||||||||||||||| ||||| ||||||||||||| || |||||||||      |||  |||||||||||||| || | ||| || ||| |||||||| |    
T  4870870 aatactcatgtctccggatctacaacgttgacgacgccgaagtcattgtcattgatcggatctgcacttgctcaaagctaatttttcaatctgaatcaaa 4870969  T
Q  113 taaacaccgcactaaga 129  Q
    |||||||||||||||||    
T  4870970 taaacaccgcactaaga 4870986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 22 - 131
Target Start/End: Complemental strand, 10627280 - 10627166
Alignment:
Q  22 actcatgtctccagatctgcaacgttgacgacaccaaagtcattg------atcatatctgcacttgctccaaacaaatcttccaacctgaatcatataa 115  Q
    ||||||||||||  |||||||||||||| ||| ||||||||||||      |||  |||||||||||||| || | ||||||| ||||||||||| ||||    
T  10627280 actcatgtctccgaatctgcaacgttgaagacgccaaagtcattgtcattgatcggatctgcacttgctcaaagctaatcttc-aacctgaatcaaataa 10627182  T
Q  116 acaccgcactaagacg 131  Q
    ||||||||||| ||||    
T  10627181 acaccgcactatgacg 10627166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 33 - 129
Target Start/End: Complemental strand, 29802890 - 29802794
Alignment:
Q  33 cagatctgcaacgttgacgacaccaaagtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaacaccgcactaaga 129  Q
    ||||||||||||||||||||||  ||||||||||||   ||||||||||| || |||| | |||| ||||  |||||| ||||||||| ||||||||    
T  29802890 cagatctgcaacgttgacgacattaaagtcattgattggatctgcacttgatcaaaactactctttcaacaagaatcaaataaacaccacactaaga 29802794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 131
Target Start/End: Complemental strand, 27534977 - 27534863
Alignment:
Q  23 ctcatgtctccagatctgcaacgttgacgacaccaaagtc------attgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaa 116  Q
    ||||||||||| ||||||||||||||||||| | ||||||      |||||||| |||||| |||| || || | |||||| |||||||||||| |||||    
T  27534977 ctcatgtctccggatctgcaacgttgacgacgctaaagtcattgttattgatcagatctgctcttgttcaaagctaatctttcaacctgaatcaaataaa 27534878  T
Q  117 caccgcactaagacg 131  Q
    || | ||||||||||    
T  27534877 catcacactaagacg 27534863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 29726434 - 29726552
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaa------gtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    ||||||||||||| | | ||||||||||||||||| |||||      ||||||||||  ||||||||||||||  | | |||||| ||||||||||||      
T  29726434 aatactcatgtcttcggttctgcaacgttgacgacgccaaagtcattgtcattgatcggatctgcacttgctcagagctaatctttcaacctgaatcaat 29726533  T
Q  113 taaacaccgcactaagacg 131  Q
    ||||||||||| |||||||    
T  29726534 taaacaccgcattaagacg 29726552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 33486867 - 33486985
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaa------gtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    ||||||||||||| | |||||||||| ||||||||||||||      ||||||||||  || |||| |||||| ||   ||| || |||||||||||| |    
T  33486867 aatactcatgtcttcggatctgcaacattgacgacaccaaagccattgtcattgatcggatttgcatttgctcaaagttaatttttcaacctgaatcaaa 33486966  T
Q  113 taaacaccgcactaagacg 131  Q
    |||||||||||||||||||    
T  33486967 taaacaccgcactaagacg 33486985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 36 - 131
Target Start/End: Original strand, 7995414 - 7995515
Alignment:
Q  36 atctgcaacgttgacgacaccaaagtcattg------atcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaacaccgcactaaga 129  Q
    |||||||||||||||||| ||||||||||||      |||  || ||||||||||| || | |||||| |||||||||||| ||||||||| ||||||||    
T  7995414 atctgcaacgttgacgacgccaaagtcattgtcattgatcggatatgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccacactaaga 7995513  T
Q  130 cg 131  Q
    ||    
T  7995514 cg 7995515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 24 - 131
Target Start/End: Complemental strand, 29205564 - 29205451
Alignment:
Q  24 tcatgtctccagatctgcaacgttgacgacaccaaagtcattg------atcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaac 117  Q
    |||||||||| ||||||||||||||| ||| ||||||||||||      |||  |||| ||||||||| || |  ||| | |||||||||||| ||||||    
T  29205564 tcatgtctccggatctgcaacgttgatgacgccaaagtcattgtcattgatcggatctacacttgctcaaagctgatcattcaacctgaatcaaataaac 29205465  T
Q  118 accgcactaagacg 131  Q
    ||||||||||||||    
T  29205464 accgcactaagacg 29205451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 129
Target Start/End: Original strand, 40862662 - 40862772
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaaca 118  Q
    ||||||||||||||  ||||||||||||||||||| ||||| ||||||||   || | ||| || || |||| |||||| ||| |||||||| |||||||    
T  40862662 aatactcatgtctctggatctgcaacgttgacgacgccaaaatcattgattgcatttacacctgatcaaaactaatctttcaatctgaatcaaataaaca 40862761  T
Q  119 ccgcactaaga 129  Q
     ||| ||||||    
T  40862762 tcgctctaaga 40862772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 13969476 - 13969525
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgat 68  Q
    ||||||||||||||| |||||||||||||||||||  |||||||||||||    
T  13969476 aatactcatgtctccggatctgcaacgttgacgacgtcaaagtcattgat 13969525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 254 - 303
Target Start/End: Complemental strand, 19270028 - 19269979
Alignment:
Q  254 tcaaatgagtcttcaactatttctccttcttcacctcttatcagcagttc 303  Q
    |||||||||||||||||||||||||| ||||||||||  |||||||||||    
T  19270028 tcaaatgagtcttcaactatttctccgtcttcacctcccatcagcagttc 19269979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 33177434 - 33177483
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgat 68  Q
    ||||||||||||||| ||| ||||| ||||||||||||||||||||||||    
T  33177434 aatactcatgtctccggatttgcaatgttgacgacaccaaagtcattgat 33177483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 44513838 - 44513887
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgat 68  Q
    ||||| ||||||||| ||||||||||||||||||| ||||||||||||||    
T  44513838 aatacccatgtctccggatctgcaacgttgacgactccaaagtcattgat 44513887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 52839808 - 52839759
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgat 68  Q
    ||||| ||||||||||||| ||||||||||||||| ||||||||||||||    
T  52839808 aatacccatgtctccagatttgcaacgttgacgactccaaagtcattgat 52839759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 13869915 - 13869803
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaaca 118  Q
    ||||| |||||||| | || || |||||||||||  | || |||||||||   |||| |||||| || |||| |||||| |||||| ||||| |||||||    
T  13869915 aatacgcatgtctctatatatgtaacgttgacgatgcaaatgtcattgattggatctacacttgttcaaaactaatctttcaacctaaatcaaataaaca 13869816  T
Q  119 ccgcactaagacg 131  Q
    |||||||||||||    
T  13869815 ccgcactaagacg 13869803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 29938515 - 29938404
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaaca 118  Q
    ||||||||||||||| ||| |||||||||||  || ||||||||||||||   ||||||||||| | ||| | | |||| |||| | ||||| |||||||    
T  29938515 aatactcatgtctccggatttgcaacgttgataacgccaaagtcattgattggatctgcacttgat-caagctattctttcaacataaatcaaataaaca 29938417  T
Q  119 ccgcactaagacg 131  Q
    |||||||| ||||    
T  29938416 ccgcactaggacg 29938404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 51418260 - 51418150
Alignment:
Q  27 tgtctccagatctgcaacgttgacgacaccaaagtcattg------atcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaacacc 120  Q
    ||||||| ||||| ||||||||||||| ||||||||||||      |||  || ||||||||||| || | |||||| | |||||||||| |||||||||    
T  51418260 tgtctccggatctacaacgttgacgacgccaaagtcattgtcattgatcggatttgcacttgctcaaagctaatctttccacctgaatcaaataaacacc 51418161  T
Q  121 gcactaagacg 131  Q
    |||| ||||||    
T  51418160 gcacaaagacg 51418150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 131
Target Start/End: Complemental strand, 10304850 - 10304744
Alignment:
Q  25 catgtctccagatctgcaacgttgacgacaccaaagtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaacaccgcac 124  Q
    |||||||||  |||||||||||||||||  | ||||||||||||   |||| ||||| ||| || | ||| || |||| ||||||| ||||||||| |||    
T  10304850 catgtctccgaatctgcaacgttgacgatgctaaagtcattgattgaatctccactttctcaaagctaatatttcaacttgaatcaaataaacaccacac 10304751  T
Q  125 taagacg 131  Q
    |||||||    
T  10304750 taagacg 10304744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 85
Target Start/End: Complemental strand, 13152718 - 13152652
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgatcatatctgcacttgctc 85  Q
    |||||| |||||||  |||||| |||||||| ||| |||||||||||||||  ||||||||||||||    
T  13152718 aatacttatgtctcttgatctgtaacgttgatgacgccaaagtcattgatcggatctgcacttgctc 13152652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 254 - 304
Target Start/End: Original strand, 36319716 - 36319766
Alignment:
Q  254 tcaaatgagtcttcaactatttctccttcttcacctcttatcagcagttcc 304  Q
    |||||||||| ||||||||||||||  ||||||||||| ||||||||||||    
T  36319716 tcaaatgagttttcaactatttctctctcttcacctctcatcagcagttcc 36319766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 238
Target Start/End: Complemental strand, 52415512 - 52415474
Alignment:
Q  200 attgtcaattttctaaatattgtgcacatctttttaatt 238  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  52415512 attgtcaattttctaaatattgtgcacatctctttaatt 52415474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 5832512 - 5832451
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgatcatatctgcact 80  Q
    |||| ||||||||||||||||||||||| || |||  ||||||||||||| | |||||||||    
T  5832512 aataatcatgtctccagatctgcaacgtggatgacgtcaaagtcattgattagatctgcact 5832451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 12967568 - 12967617
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgat 68  Q
    |||| |||||||||||||||| |||||| || ||||||||||||||||||    
T  12967568 aataatcatgtctccagatctacaacgtggatgacaccaaagtcattgat 12967617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 15276282 - 15276331
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgat 68  Q
    |||| ||||||||||||||||||||||| || ||| ||||||||||||||    
T  15276282 aataatcatgtctccagatctgcaacgtggatgacgccaaagtcattgat 15276331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 25278672 - 25278721
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgat 68  Q
    ||||||||||||| ||||||||||||||| |||||| ||||||| |||||    
T  25278672 aatactcatgtcttcagatctgcaacgttaacgacatcaaagtccttgat 25278721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 25689684 - 25689733
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgat 68  Q
    ||||||||||||| ||||||||||| ||||||||| || |||||||||||    
T  25689684 aatactcatgtcttcagatctgcaatgttgacgacgccgaagtcattgat 25689733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 33938850 - 33938968
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgatcat-------atctgcacttgctccaaacaaatcttccaacctgaatcat 111  Q
    ||||||||||||||| |||||| ||||||||||||  ||||||||||| ||||       ||||| |||||||| || | |||||| |||||| || ||     
T  33938850 aatactcatgtctccggatctggaacgttgacgacgacaaagtcattg-tcattgattggatctgtacttgctcaaagctaatctttcaacctaaaccaa 33938948  T
Q  112 ataaacaccgcactaagacg 131  Q
    |||| |||||||||||||||    
T  33938949 ataagcaccgcactaagacg 33938968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 130
Target Start/End: Complemental strand, 8737601 - 8737517
Alignment:
Q  46 ttgacgacaccaaagtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaacaccgcactaagac 130  Q
    |||| ||||||||| | ||||||   |||||||||| ||| || | |||||| |||||||||||| |||||||| ||||||||||    
T  8737601 ttgatgacaccaaaattattgattggatctgcacttactcaaagctaatctttcaacctgaatcaaataaacactgcactaagac 8737517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 46589426 - 46589378
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattga 67  Q
    ||||||||||| ||| ||||||||||||||| ||| |||||||||||||    
T  46589426 aatactcatgtgtccggatctgcaacgttgaggactccaaagtcattga 46589378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 25 - 68
Target Start/End: Original strand, 8743977 - 8744020
Alignment:
Q  25 catgtctccagatctgcaacgttgacgacaccaaagtcattgat 68  Q
    ||||||| || ||||||||||||||| |||||||||||||||||    
T  8743977 catgtcttcatatctgcaacgttgacaacaccaaagtcattgat 8744020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 60 - 131
Target Start/End: Complemental strand, 17347834 - 17347763
Alignment:
Q  60 gtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaacaccgcactaagacg 131  Q
    ||||||||||  |||||||||| ||| || | |||||| |||||| ||||| |||||||| |||||||||||    
T  17347834 gtcattgatcgaatctgcacttactcaaagctaatctttcaaccttaatcaaataaacactgcactaagacg 17347763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 131
Target Start/End: Complemental strand, 20411777 - 20411738
Alignment:
Q  92 aatcttccaacctgaatcatataaacaccgcactaagacg 131  Q
    |||||| |||||||||||| ||||||||||||||||||||    
T  20411777 aatctttcaacctgaatcaaataaacaccgcactaagacg 20411738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 25 - 68
Target Start/End: Original strand, 27469550 - 27469593
Alignment:
Q  25 catgtctccagatctgcaacgttgacgacaccaaagtcattgat 68  Q
    ||||||||| ||||||||||||||||||| |||||| |||||||    
T  27469550 catgtctccggatctgcaacgttgacgactccaaagccattgat 27469593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 28399172 - 28399283
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaaca 118  Q
    |||||| | |||| ||||||||||| |||||| |  | ||||||||||||   |||||||||||||| || | ||| || |||| ||||||| ||||| |    
T  28399172 aatacttaggtcttcagatctgcaatgttgacaatgcaaaagtcattgattggatctgcacttgctcaaagctaatatttcaacatgaatcaaataaata 28399271  T
Q  119 ccgcactaagac 130  Q
    ||||| ||||||    
T  28399272 ccgcattaagac 28399283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 36 - 131
Target Start/End: Original strand, 39080775 - 39080870
Alignment:
Q  36 atctgcaacgttgacgacaccaaagtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaacaccgcactaagacg 131  Q
    |||||||| ||||| ||||  ||||||| ||||   |||| ||||||||| |||| ||||||  ||| ||||||| |||||||| |||||||||||    
T  39080775 atctgcaatgttgatgacaataaagtcactgattgaatctacacttgctcaaaactaatcttttaacatgaatcaaataaacactgcactaagacg 39080870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 50107756 - 50107870
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgatcatatctgcacttgctccaaac--aaatcttccaacctgaatcatataaa 116  Q
    ||||||||||| ||  ||||||||| ||||||||||| ||||||||||||   || |||||||| || || |   ||| || |||| | ||||| |||||    
T  50107756 aatactcatgtttctggatctgcaatgttgacgacacaaaagtcattgattgaatttgcacttgatcaaagctataatttttcaacataaatcaaataaa 50107855  T
Q  117 caccgcactaagacg 131  Q
    |||||||||||||||    
T  50107856 caccgcactaagacg 50107870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 238
Target Start/End: Complemental strand, 4671788 - 4671750
Alignment:
Q  200 attgtcaattttctaaatattgtgcacatctttttaatt 238  Q
    |||||||||||| |||||||||||||||||| |||||||    
T  4671788 attgtcaattttttaaatattgtgcacatctatttaatt 4671750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 8224452 - 8224406
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcatt 65  Q
    |||||||||| ||| ||||||||| |||||||||| |||||||||||    
T  8224452 aatactcatgcctctagatctgcatcgttgacgacgccaaagtcatt 8224406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 304
Target Start/End: Original strand, 11237826 - 11237876
Alignment:
Q  254 tcaaatgagtcttcaactatttctccttcttcacctcttatcagcagttcc 304  Q
    ||||||||||||||||||| |||||| |||||| |||  ||||||||||||    
T  11237826 tcaaatgagtcttcaactacttctccatcttcagctcccatcagcagttcc 11237876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 12147884 - 12147930
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcatt 65  Q
    ||||| ||||||||| ||| ||||||||||||||| |||||||||||    
T  12147884 aatacccatgtctccggatttgcaacgttgacgactccaaagtcatt 12147930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 304
Target Start/End: Original strand, 13254505 - 13254555
Alignment:
Q  254 tcaaatgagtcttcaactatttctccttcttcacctcttatcagcagttcc 304  Q
    ||||||||||||||||||||| |||  ||||||||||| ||||||| ||||    
T  13254505 tcaaatgagtcttcaactattgctcactcttcacctctcatcagcaattcc 13254555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 65
Target Start/End: Original strand, 37684934 - 37684972
Alignment:
Q  27 tgtctccagatctgcaacgttgacgacaccaaagtcatt 65  Q
    ||||||| ||||||||||||||||||| |||||||||||    
T  37684934 tgtctccggatctgcaacgttgacgactccaaagtcatt 37684972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 65
Target Start/End: Complemental strand, 37700583 - 37700545
Alignment:
Q  27 tgtctccagatctgcaacgttgacgacaccaaagtcatt 65  Q
    ||||||| ||||||||||||||||||| |||||||||||    
T  37700583 tgtctccggatctgcaacgttgacgactccaaagtcatt 37700545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 238
Target Start/End: Original strand, 40518843 - 40518881
Alignment:
Q  200 attgtcaattttctaaatattgtgcacatctttttaatt 238  Q
    ||||| ||||||||||||||||||||||||| |||||||    
T  40518843 attgttaattttctaaatattgtgcacatctctttaatt 40518881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 130
Target Start/End: Complemental strand, 8937885 - 8937797
Alignment:
Q  41 caacgttgacgacaccaaagtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaacaccgcactaagac 130  Q
    ||||||||||||| ||||||||||||||   |||| |  ||||| ||||| |||||| |||  ||||||| |||||||||||| ||||||    
T  8937885 caacgttgacgacgccaaagtcattgattgaatctacctttgct-caaactaatctttcaatttgaatcaaataaacaccgcattaagac 8937797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 26771384 - 26771335
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgat 68  Q
    |||| |||||||| | |||||||||||||||||||| |||||| ||||||    
T  26771384 aatattcatgtcttcggatctgcaacgttgacgacatcaaagttattgat 26771335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 34659477 - 34659526
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgat 68  Q
    ||||| ||| ||||| ||||||||| ||||||||| ||||||||||||||    
T  34659477 aatacccatatctccggatctgcaatgttgacgacgccaaagtcattgat 34659526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 40992576 - 40992527
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgat 68  Q
    |||| |||||||||| |||||||||||| || ||| ||||||||||||||    
T  40992576 aatattcatgtctccggatctgcaacgtggatgacgccaaagtcattgat 40992527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 44562585 - 44562634
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgat 68  Q
    |||| |||||||||| |||||||||||| || ||| ||||||||||||||    
T  44562585 aatagtcatgtctccggatctgcaacgtagatgacgccaaagtcattgat 44562634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 55 - 131
Target Start/End: Complemental strand, 13999208 - 13999132
Alignment:
Q  55 ccaaagtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaacaccgcactaagacg 131  Q
    ||||||||||||||   ||||||| |||||| ||   |||||| |||||||||||| ||||||| || |||||||||    
T  13999208 ccaaagtcattgattgaatctgcatttgctcaaagttaatcttacaacctgaatcaaataaacatcgtactaagacg 13999132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 128
Target Start/End: Original strand, 15791191 - 15791227
Alignment:
Q  92 aatcttccaacctgaatcatataaacaccgcactaag 128  Q
    |||||| |||||||||||| |||||||||||||||||    
T  15791191 aatctttcaacctgaatcaaataaacaccgcactaag 15791227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 69; Significance: 6e-31; HSPs: 71)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 19 - 127
Target Start/End: Original strand, 4621210 - 4621318
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaaca 118  Q
    ||||||||||||||| ||||||||| ||||| |||||||||||||||||||  ||||||||||| || |||| |||||| |||||||||||| |||||||    
T  4621210 aatactcatgtctccggatctgcaatgttgatgacaccaaagtcattgatcggatctgcacttgttcaaaactaatctttcaacctgaatcaaataaaca 4621309  T
Q  119 ccgcactaa 127  Q
    |||||||||    
T  4621310 ccgcactaa 4621318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 21954661 - 21954773
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaaca 118  Q
    |||||||||| |||| ||||||||||||||||||| |||||||||||||||  || ||||||||||| || | |||||| |||||||||||| |||||||    
T  21954661 aatactcatgactccggatctgcaacgttgacgacgccaaagtcattgatcggatttgcacttgctcaaagctaatctttcaacctgaatcaaataaaca 21954760  T
Q  119 ccgcactaagacg 131  Q
    |  ||||||||||    
T  21954761 cgacactaagacg 21954773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 29352504 - 29352392
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaaca 118  Q
    ||||||||| ||||| ||||||||||||||||||| | |||||||||||||  |||| ||||||| | || | |||||| |||||||||||| |||||||    
T  29352504 aatactcatctctccggatctgcaacgttgacgacgcaaaagtcattgatcgaatctacacttgcacaaagctaatctttcaacctgaatcaaataaaca 29352405  T
Q  119 ccgcactaagacg 131  Q
     ||||||||||||    
T  29352404 tcgcactaagacg 29352392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 17509041 - 17509159
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattg------atcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    ||||||||||||||| ||||||| ||||||||||| ||||||||||||      |||  |||||||||||||| |||| |||||| |||||||||| | |    
T  17509041 aatactcatgtctccggatctgcgacgttgacgacgccaaagtcattgtcattgatcggatctgcacttgctcaaaactaatctttcaacctgaattaaa 17509140  T
Q  113 taaacaccgcactaagacg 131  Q
    |||||||||||||||||||    
T  17509141 taaacaccgcactaagacg 17509159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 17544173 - 17544055
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattg------atcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    ||||||||||||||| ||||||| ||||||||||| ||||||||||||      |||  |||||||||||||| |||| |||||| |||||||||| | |    
T  17544173 aatactcatgtctccggatctgcgacgttgacgacgccaaagtcattgtcattgatcggatctgcacttgctcaaaactaatctttcaacctgaattaaa 17544074  T
Q  113 taaacaccgcactaagacg 131  Q
    |||||||||||||||||||    
T  17544073 taaacaccgcactaagacg 17544055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 24320060 - 24320178
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattg------atcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    ||||||||||||  ||||||||||| ||||||||||||||||||||||      |||  |||||||||||||| || | |||||| |||||||||||| |    
T  24320060 aatactcatgtcatcagatctgcaatgttgacgacaccaaagtcattgtcatagatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaa 24320159  T
Q  113 taaacaccgcactaagacg 131  Q
    |||||||||||||||||||    
T  24320160 taaacaccgcactaagacg 24320178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 45457393 - 45457511
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaa------gtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    ||||||||||||||| ||||||||||||||||||| |||||      ||||||||||  |||||||||||||| || | |||||| |||||||||||| |    
T  45457393 aatactcatgtctccggatctgcaacgttgacgactccaaagtcattgtcattgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaa 45457492  T
Q  113 taaacaccgcactaagacg 131  Q
    ||||||||| |||||||||    
T  45457493 taaacaccgtactaagacg 45457511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 21 - 131
Target Start/End: Complemental strand, 3266668 - 3266552
Alignment:
Q  21 tactcatgtctccagatctgcaacgttgacgacaccaaagtcattg------atcatatctgcacttgctccaaacaaatcttccaacctgaatcatata 114  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||      |||  |||||||||||||| || | |||||| |||||||||||| |||    
T  3266668 tactcatgtctccggatctacaacgttgacgacaccaaagtcattgtcattgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaata 3266569  T
Q  115 aacaccgcactaagacg 131  Q
    ||||||| |||||||||    
T  3266568 aacaccgtactaagacg 3266552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 19 - 129
Target Start/End: Complemental strand, 9785601 - 9785485
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattg------atcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    ||||||||||| ||| ||||||||||||||||||| ||||||||||||      |||  |||||||||||||| || | |||||| |||||||||||| |    
T  9785601 aatactcatgtttccggatctgcaacgttgacgactccaaagtcattgtcattgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaa 9785502  T
Q  113 taaacaccgcactaaga 129  Q
    |||||||||||||||||    
T  9785501 taaacaccgcactaaga 9785485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 19 - 181
Target Start/End: Original strand, 1280974 - 1281142
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgatcat-------atctgcacttgctccaaacaaatcttccaacctgaatcat 111  Q
    ||||||||| ||||| ||||||||||||||||||| |||||||||||| ||||       |||||||||||||| ||   |||||| ||||||||||||     
T  1280974 aatactcatatctccggatctgcaacgttgacgacgccaaagtcattg-tcattgttcggatctgcacttgctcaaaggtaatctttcaacctgaatcaa 1281072  T
Q  112 ataaacaccgcactaagacgnnnnnnnnnnnncacaccacacaacgacgagaaatcaaaacaaatagagt 181  Q
    ||||||||||||||||||||            |||||| ||||| ||||||||||||||||||| |||||    
T  1281073 ataaacaccgcactaagacgggaaatcaaaaacacaccgcacaaagacgagaaatcaaaacaaacagagt 1281142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 9719810 - 9719928
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaa------gtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    ||||||||||||| | |||||||||||||||| || |||||      ||||||||||  |||||||||||||| || | |||||| |||||||||||| |    
T  9719810 aatactcatgtcttctgatctgcaacgttgactacgccaaaatcattgtcattgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaa 9719909  T
Q  113 taaacaccgcactaagacg 131  Q
    |||||||||||||||||||    
T  9719910 taaacaccgcactaagacg 9719928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 21990946 - 21990828
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtc------attgatcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||      |||||||  ||| |||||||||| || | |||||| ||| |||||||| |    
T  21990946 aatactcatgtctccggatctgcaacgttgacgacgccaaagtcattgtcattgatcggatcagcacttgctcaaagctaatctttcaagctgaatcaaa 21990847  T
Q  113 taaacaccgcactaagacg 131  Q
    |||||||||||||||||||    
T  21990846 taaacaccgcactaagacg 21990828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 24988317 - 24988435
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattg------atcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    ||||||||||| ||| |||||||||||||||| |||||||||||||||      |||  |||| ||||||||| || | |||||| |||||||||||| |    
T  24988317 aatactcatgtatccggatctgcaacgttgacaacaccaaagtcattgtcattgatcggatctacacttgctcaaagctaatctttcaacctgaatcaaa 24988416  T
Q  113 taaacaccgcactaagacg 131  Q
    |||||||||||||||||||    
T  24988417 taaacaccgcactaagacg 24988435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 28664778 - 28664896
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtca------ttgatcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    ||||||||||||||   |||||||||||||||||| |||||||||      ||||||| |||||||||||||| || | |||||| |||||||||||| |    
T  28664778 aatactcatgtctctgaatctgcaacgttgacgacgccaaagtcattgtcattgatcagatctgcacttgctcaaagctaatctttcaacctgaatcaaa 28664877  T
Q  113 taaacaccgcactaagacg 131  Q
    ||||||| |||||||||||    
T  28664878 taaacactgcactaagacg 28664896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 130
Target Start/End: Complemental strand, 26161234 - 26161118
Alignment:
Q  20 atactcatgtctccagatctgcaacgttgacgacaccaaagtc------attgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatat 113  Q
    |||||||||||||| ||||||||||||||||||| ||||||||      |||||||  |||||||||||||| || | |||||| |||||||||||| ||    
T  26161234 atactcatgtctccggatctgcaacgttgacgacgccaaagtcattgtcattgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaat 26161135  T
Q  114 aaacaccgcactaagac 130  Q
     ||| ||||||||||||    
T  26161134 gaaccccgcactaagac 26161118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 48304229 - 48304348
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattg-------atcatatctgcacttgctccaaacaaatcttccaacctgaatcat 111  Q
    ||||||||||| |||  |||||||||||||||||| ||||||||||||       |||  |||||||||||||| || | |||||| ||||||||||||     
T  48304229 aatactcatgtgtccgtatctgcaacgttgacgacgccaaagtcattgtcattcgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaa 48304328  T
Q  112 ataaacaccgcactaagacg 131  Q
    ||||||||||||||||||||    
T  48304329 ataaacaccgcactaagacg 48304348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 10094725 - 10094607
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattg------atcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    |||||||||||||   ||||||||||||| ||||||||||||||||||      |||  || ||||||||||| || | |||||| |||||||||||| |    
T  10094725 aatactcatgtctttggatctgcaacgttaacgacaccaaagtcattgtcattgatcggatttgcacttgctcaaagctaatctttcaacctgaatcaaa 10094626  T
Q  113 taaacaccgcactaagacg 131  Q
    |||||||||||||||||||    
T  10094625 taaacaccgcactaagacg 10094607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 10574657 - 10574547
Alignment:
Q  27 tgtctccagatctgcaacgttgacgacaccaaagtcattg------atcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaacacc 120  Q
    |||||||||||||||||||||||||||  |||||||||||      |||  |||||||||||||| |||| |||||| |||| ||||||| |||||||||    
T  10574657 tgtctccagatctgcaacgttgacgacgtcaaagtcattgtcattgatcggatctgcacttgctcaaaactaatctttcaacatgaatcaaataaacacc 10574558  T
Q  121 gcactaagacg 131  Q
    | |||||||||    
T  10574557 gaactaagacg 10574547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 17473589 - 17473707
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattg------atcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    ||||||||||||||  ||||||| ||||||||||| ||||||||||||      |||  |||||||||||||| |||| |||||| |||||||||| | |    
T  17473589 aatactcatgtctctggatctgcgacgttgacgacgccaaagtcattgtcattgatcggatctgcacttgctcaaaactaatctttcaacctgaattaaa 17473688  T
Q  113 taaacaccgcactaagacg 131  Q
    |||||||||||| ||||||    
T  17473689 taaacaccgcacaaagacg 17473707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 17579625 - 17579507
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattg------atcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    ||||||||||||||  ||||||| ||||||||||| ||||||||||||      |||  |||||||||||||| |||| |||||| |||||||||| | |    
T  17579625 aatactcatgtctctggatctgcgacgttgacgacgccaaagtcattgtcattgatcggatctgcacttgctcaaaactaatctttcaacctgaattaaa 17579526  T
Q  113 taaacaccgcactaagacg 131  Q
    |||||||||||| ||||||    
T  17579525 taaacaccgcacaaagacg 17579507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 41288240 - 41288122
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattg------atcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    ||||||||||| ||| ||||| ||||||||||||| ||||||||||||      |||  |||||||||||||| || | |||||| |||||||||||| |    
T  41288240 aatactcatgtatccggatctacaacgttgacgacgccaaagtcattgtcattgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaa 41288141  T
Q  113 taaacaccgcactaagacg 131  Q
    ||||||||| |||||||||    
T  41288140 taaacaccgtactaagacg 41288122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 45482348 - 45482230
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattg------atcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    ||||||||||||||| ||||||||||||||||  | ||||||||||||      |||  |||||||||||||| || | |||||| |||||||||||| |    
T  45482348 aatactcatgtctccggatctgcaacgttgacagcgccaaagtcattgtcattgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaa 45482249  T
Q  113 taaacaccgcactaagacg 131  Q
    |||||| ||||||||||||    
T  45482248 taaacatcgcactaagacg 45482230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 19 - 126
Target Start/End: Original strand, 42603606 - 42603719
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaa------gtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    |||||||||||||||||||||| ||||||||||||| ||||      ||||||||||  || ||||||||||  || | |||||| |||||||||||| |    
T  42603606 aatactcatgtctccagatctgtaacgttgacgacatcaaagtcattgtcattgatcggatatgcacttgcttaaagctaatctttcaacctgaatcaaa 42603705  T
Q  113 taaacaccgcacta 126  Q
    ||||||||||||||    
T  42603706 taaacaccgcacta 42603719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 128
Target Start/End: Complemental strand, 9137234 - 9137125
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaaca 118  Q
    |||||| |||||||| ||||||||||||||||||| ||||||||| |||||  || ||||||| ||| || | ||||||  ||||| ||||| |||||||    
T  9137234 aatacttatgtctccggatctgcaacgttgacgacgccaaagtcaatgatcgaatatgcactttctcaaagctaatcttttaaccttaatcaaataaaca 9137135  T
Q  119 ccgcactaag 128  Q
    || |||||||    
T  9137134 ccacactaag 9137125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 128
Target Start/End: Original strand, 39532812 - 39532927
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcatt------gatcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    ||||||||||| ||| ||||||||| ||||||||| |||||||||||      ||||  |||||||||||||| || | |||||| |||| ||||||| |    
T  39532812 aatactcatgtttccggatctgcaatgttgacgactccaaagtcattatcattgatcggatctgcacttgctcaaagctaatctttcaacttgaatcaaa 39532911  T
Q  113 taaacaccgcactaag 128  Q
    ||||||||||||||||    
T  39532912 taaacaccgcactaag 39532927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 112
Target Start/End: Original strand, 44482710 - 44482809
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaa------gtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    ||||||||||||||| |||||||||||||||||||||||||      ||||||||||  |||||||||||||| || | ||| || ||||||||||||||    
T  44482710 aatactcatgtctccggatctgcaacgttgacgacaccaaagtcattgtcattgatcggatctgcacttgctcaaagctaatatttcaacctgaatcata 44482809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 60 - 131
Target Start/End: Complemental strand, 11833255 - 11833184
Alignment:
Q  60 gtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaacaccgcactaagacg 131  Q
    ||||||||||  |||||||||||||| || | |||||| |||||||||||| ||||||||||||||||||||    
T  11833255 gtcattgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcactaagacg 11833184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 36579178 - 36579296
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtca------ttgatcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    |||||| |||||||| |||||||||| |||||||| |||||||||      ||||||| |||| || |||||| || | |||||| ||| |||||||| |    
T  36579178 aatactaatgtctccggatctgcaacattgacgacgccaaagtcattgtcattgatcagatctacaattgctcaaagctaatctttcaatctgaatcaaa 36579277  T
Q  113 taaacaccgcactaagacg 131  Q
    |||||||||||||||||||    
T  36579278 taaacaccgcactaagacg 36579296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 24 - 131
Target Start/End: Complemental strand, 42644951 - 42644838
Alignment:
Q  24 tcatgtctccagatctgcaacgttgacgacaccaaa------gtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaac 117  Q
    |||||||||| ||||||||||||||||||| |||||      ||||||||||  ||||| |||||||| || | ||| || |||||||||| | ||||||    
T  42644951 tcatgtctccggatctgcaacgttgacgacgccaaaatcattgtcattgatcggatctgtacttgctcaaagctaatatttcaacctgaattaaataaac 42644852  T
Q  118 accgcactaagacg 131  Q
    ||||||||||||||    
T  42644851 accgcactaagacg 42644838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 37375883 - 37375928
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcat 64  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||    
T  37375883 aatactcatgtctccagatctgcaacgttgacgacgccaaagtcat 37375928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 9137685 - 9137574
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaaca 118  Q
    ||||||||||| ||  ||| ||||||||||||||| ||||| ||| | |||||||||||| |||||| |||| |||||| ||| |||||||| |||||||    
T  9137685 aatactcatgtatctggatttgcaacgttgacgacgccaaattcaataatcatatctgca-ttgctcaaaactaatctttcaaactgaatcaaataaaca 9137587  T
Q  119 ccgcactaagacg 131  Q
      || ||||||||    
T  9137586 ttgcgctaagacg 9137574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 119
Target Start/End: Original strand, 14657694 - 14657794
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaaca 118  Q
    ||||||||||||||| |||||||||| |||| ||| |||||||||||||||  || |||| |||||| ||   |||||| ||| |||||||| |||||||    
T  14657694 aatactcatgtctccggatctgcaacattgatgacgccaaagtcattgatcgaatatgcatttgctcaaagttaatctttcaatctgaatcaaataaaca 14657793  T
Q  119 c 119  Q
    |    
T  14657794 c 14657794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 66
Target Start/End: Original strand, 15017212 - 15017259
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattg 66  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||    
T  15017212 aatactcatgtctccagatctgcaacgttgacgacgctaaagtcattg 15017259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 32741036 - 32740918
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaa------gtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    ||||||||||||||| ||| |||||||||  |||| |||||      ||||||||||  || ||||||||||| |||| |||||| |||||||||||| |    
T  32741036 aatactcatgtctccggatttgcaacgttagcgacgccaaaatcattgtcattgatcggatttgcacttgctcaaaactaatctttcaacctgaatcaaa 32740937  T
Q  113 taaacaccgcactaagacg 131  Q
    || ||||| ||||||||||    
T  32740936 tagacaccacactaagacg 32740918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 36719389 - 36719507
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaa------gtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    ||||||||||||||| |||||| |||||||| ||| |||||      ||||||||||| ||||| |||||||| ||   |||||| |||||||||||| |    
T  36719389 aatactcatgtctccggatctggaacgttgatgacgccaaagtcattgtcattgatcagatctgtacttgctcaaagttaatctttcaacctgaatcaaa 36719488  T
Q  113 taaacaccgcactaagacg 131  Q
    ||| |||| ||||||||||    
T  36719489 taagcaccccactaagacg 36719507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 131
Target Start/End: Complemental strand, 38277105 - 38277010
Alignment:
Q  36 atctgcaacgttgacgacaccaaagtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaacaccgcactaagacg 131  Q
    |||||||||||||||||| |||||||||||||||  || || |||||||| || | ||| || |||| ||||||| |||||||  |||||||||||    
T  38277105 atctgcaacgttgacgacgccaaagtcattgatcggatttgaacttgctcaaagctaatatttcaacatgaatcaaataaacattgcactaagacg 38277010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 60 - 131
Target Start/End: Original strand, 46025913 - 46025984
Alignment:
Q  60 gtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaacaccgcactaagacg 131  Q
    ||||||||||  |||||||||||||| || | |||||| |||||| ||||| ||||||||||||||||||||    
T  46025913 gtcattgatcggatctgcacttgctcaaagctaatctttcaacctaaatcaaataaacaccgcactaagacg 46025984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 200 - 238
Target Start/End: Original strand, 2271561 - 2271599
Alignment:
Q  200 attgtcaattttctaaatattgtgcacatctttttaatt 238  Q
    |||||||||||||||||||||||||||||||||||||||    
T  2271561 attgtcaattttctaaatattgtgcacatctttttaatt 2271599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 200 - 238
Target Start/End: Complemental strand, 27723676 - 27723638
Alignment:
Q  200 attgtcaattttctaaatattgtgcacatctttttaatt 238  Q
    |||||||||||||||||||||||||||||||||||||||    
T  27723676 attgtcaattttctaaatattgtgcacatctttttaatt 27723638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 6667679 - 6667561
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtc------attgatcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    |||||||| |||| | ||||||||||||||||||| ||||||||      |||||||| || |||||||| || || | |||||| |||| ||| |||      
T  6667679 aatactcaggtcttcggatctgcaacgttgacgacgccaaagtcattgtcattgatcagatatgcacttgatcaaagccaatctttcaacttgagtcaat 6667580  T
Q  113 taaacaccgcactaagacg 131  Q
    |||||||||||||||||||    
T  6667579 taaacaccgcactaagacg 6667561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 25 - 68
Target Start/End: Complemental strand, 9934115 - 9934072
Alignment:
Q  25 catgtctccagatctgcaacgttgacgacaccaaagtcattgat 68  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||    
T  9934115 catgtctccggatctgcaacgttgacgactccaaagtcattgat 9934072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 60 - 131
Target Start/End: Complemental strand, 21603697 - 21603626
Alignment:
Q  60 gtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaacaccgcactaagacg 131  Q
    ||||||||||  |||||||||| ||| ||   |||||| |||||||||||| ||||||||||||||||||||    
T  21603697 gtcattgatcggatctgcactttctcaaagttaatctttcaacctgaatcaaataaacaccgcactaagacg 21603626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 129
Target Start/End: Complemental strand, 25531731 - 25531620
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgatcat-atctgcacttgctccaaacaaatcttccaacctgaatcatataaac 117  Q
    |||| |||||||||  |||| |||||||||| |||||| ||||||||||   | || ||||||||||| || | |||| | |||||| ||||| ||||||    
T  25531731 aatattcatgtctcaggatcagcaacgttgatgacaccgaagtcattgaatttgatttgcacttgctcaaagctaatcattcaaccttaatcaaataaac 25531632  T
Q  118 accgcactaaga 129  Q
    ||||||||||||    
T  25531631 accgcactaaga 25531620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 25 - 121
Target Start/End: Complemental strand, 36253208 - 36253106
Alignment:
Q  25 catgtctccagatctgcaacgttgacgacaccaaagtcattg------atcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaaca 118  Q
    ||||||||| ||||| ||||||||||||| ||||||||||||      |||  |||||||||||||| || | ||| || |||||||||||| |||||||    
T  36253208 catgtctccggatctacaacgttgacgacgccaaagtcattgtcattgatcggatctgcacttgctcaaagctaatttttcaacctgaatcaaataaaca 36253109  T
Q  119 ccg 121  Q
    |||    
T  36253108 ccg 36253106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 127
Target Start/End: Complemental strand, 40761872 - 40761758
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtc------attgatcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    ||||||||||||||| |||||| |||||||||||  ||||||||      |||||||  ||||||||||| || || | ||| || |||||| ||||| |    
T  40761872 aatactcatgtctccggatctgtaacgttgacgatgccaaagtcattgtcattgatcggatctgcacttgttcaaagctaatatttcaaccttaatcaaa 40761773  T
Q  113 taaacaccgcactaa 127  Q
    |||||||||||||||    
T  40761772 taaacaccgcactaa 40761758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 82
Target Start/End: Original strand, 45949515 - 45949578
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgatcatatctgcacttg 82  Q
    |||| ||||| |||| ||||||||||||||||||| ||||||||||||||   |||||||||||    
T  45949515 aatagtcatgcctccggatctgcaacgttgacgacgccaaagtcattgattggatctgcacttg 45949578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 238
Target Start/End: Complemental strand, 4567769 - 4567731
Alignment:
Q  200 attgtcaattttctaaatattgtgcacatctttttaatt 238  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  4567769 attgttaattttctaaatattgtgcacatctttttaatt 4567731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 130
Target Start/End: Complemental strand, 6496165 - 6496059
Alignment:
Q  24 tcatgtctccagatctgcaacgttgacgacaccaaagtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaacaccgca 123  Q
    ||||||||| | ||||||||| |||||||   |||||| |||||||  ||||||||||| || ||   |||||| |||||||||||| |||||||  |||    
T  6496165 tcatgtctctaaatctgcaacattgacgatgtcaaagttattgatcggatctgcacttgttcaaagttaatctttcaacctgaatcaaataaacattgca 6496066  T
Q  124 ctaagac 130  Q
    |||||||    
T  6496065 ctaagac 6496059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 234
Target Start/End: Complemental strand, 12394609 - 12394575
Alignment:
Q  200 attgtcaattttctaaatattgtgcacatcttttt 234  Q
    |||||||||||||||||||||||||||||||||||    
T  12394609 attgtcaattttctaaatattgtgcacatcttttt 12394575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 238
Target Start/End: Complemental strand, 37124633 - 37124595
Alignment:
Q  200 attgtcaattttctaaatattgtgcacatctttttaatt 238  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  37124633 attgtcaattttctaaataatgtgcacatctttttaatt 37124595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 254 - 299
Target Start/End: Complemental strand, 12394484 - 12394439
Alignment:
Q  254 tcaaatgagtcttcaactatttctccttcttcacctcttatcagca 299  Q
    |||||||||||||||||||||||||| |||||| |||| |||||||    
T  12394484 tcaaatgagtcttcaactatttctccctcttcaactctcatcagca 12394439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 37714757 - 37714645
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaaca 118  Q
    ||||||||||| | | ||| |||||||||||||||   || || ||||||   ||||||||||| || |||  |||||| |||||||||||| |||||||    
T  37714757 aatactcatgttttcggatttgcaacgttgacgacgtaaatgttattgattgaatctgcacttgatcaaaattaatctttcaacctgaatcaaataaaca 37714658  T
Q  119 ccgcactaagacg 131  Q
      |||||||||||    
T  37714657 ttgcactaagacg 37714645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 25 - 68
Target Start/End: Original strand, 134987 - 135030
Alignment:
Q  25 catgtctccagatctgcaacgttgacgacaccaaagtcattgat 68  Q
    |||||||||||||||||||||| || ||| ||||||||||||||    
T  134987 catgtctccagatctgcaacgtggatgacgccaaagtcattgat 135030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 249 - 304
Target Start/End: Complemental strand, 4567660 - 4567605
Alignment:
Q  249 ttttctcaaatgagtcttcaactatttctccttcttcacctcttatcagcagttcc 304  Q
    |||| |||| |||||||||||||||| |||| ||||||||||| ||||||| ||||    
T  4567660 ttttgtcaattgagtcttcaactattgctccctcttcacctctcatcagcaattcc 4567605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 29 - 68
Target Start/End: Original strand, 23732239 - 23732278
Alignment:
Q  29 tctccagatctgcaacgttgacgacaccaaagtcattgat 68  Q
    |||||||||||||||||| |||||| ||||||||||||||    
T  23732239 tctccagatctgcaacgtggacgacgccaaagtcattgat 23732278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 32643248 - 32643205
Alignment:
Q  23 ctcatgtctccagatctgcaacgttgacgacaccaaagtcattg 66  Q
    ||||||||||| |||||||||||| |||||| ||||||||||||    
T  32643248 ctcatgtctccggatctgcaacgtggacgacgccaaagtcattg 32643205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 68
Target Start/End: Original strand, 5024899 - 5024941
Alignment:
Q  26 atgtctccagatctgcaacgttgacgacaccaaagtcattgat 68  Q
    |||||||| |||||||||| |||||||| ||||||||||||||    
T  5024899 atgtctccggatctgcaacattgacgactccaaagtcattgat 5024941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 238
Target Start/End: Complemental strand, 16197239 - 16197201
Alignment:
Q  200 attgtcaattttctaaatattgtgcacatctttttaatt 238  Q
    |||||||||||| |||||||||||||| |||||||||||    
T  16197239 attgtcaattttttaaatattgtgcacgtctttttaatt 16197201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 17222353 - 17222303
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgatc 69  Q
    |||||| |||||||| ||||| ||||||||| ||| |||||||||||||||    
T  17222353 aatacttatgtctccggatctacaacgttgatgacgccaaagtcattgatc 17222303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 68
Target Start/End: Complemental strand, 28015628 - 28015586
Alignment:
Q  26 atgtctccagatctgcaacgttgacgacaccaaagtcattgat 68  Q
    |||||||| ||||||||| ||||||||| ||||||||||||||    
T  28015628 atgtctccggatctgcaatgttgacgactccaaagtcattgat 28015586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 238
Target Start/End: Original strand, 35792746 - 35792784
Alignment:
Q  200 attgtcaattttctaaatattgtgcacatctttttaatt 238  Q
    ||||||||||||||| ||||| |||||||||||||||||    
T  35792746 attgtcaattttctagatattatgcacatctttttaatt 35792784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 772721 - 772672
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgat 68  Q
    ||||||||||||||  ||||| ||| ||||||||| ||||||||||||||    
T  772721 aatactcatgtctctggatcttcaatgttgacgacgccaaagtcattgat 772672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 131
Target Start/End: Complemental strand, 5684599 - 5684530
Alignment:
Q  62 cattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaacaccgcactaagacg 131  Q
    ||||||||  |||||||||||||| || | |||||| |||||||||||| | |||||||  |||||||||    
T  5684599 cattgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaacaaacaccatactaagacg 5684530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 131
Target Start/End: Complemental strand, 5709649 - 5709580
Alignment:
Q  62 cattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaacaccgcactaagacg 131  Q
    ||||||||  |||||||||||||| || | |||||| |||||||||||| | |||||||  |||||||||    
T  5709649 cattgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaacaaacaccatactaagacg 5709580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 16273654 - 16273597
Alignment:
Q  25 catgtctccagatctgcaacgttgacgacaccaaagtcattgatcatatctgcacttg 82  Q
    ||||||||| ||||||||||||||||||  ||| ||||||||||   |||||||||||    
T  16273654 catgtctccggatctgcaacgttgacgagtccagagtcattgatttgatctgcacttg 16273597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 131
Target Start/End: Complemental strand, 31703491 - 31703374
Alignment:
Q  14 tcatcaatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatat 113  Q
    |||| |||||| ||| || |||||||||||| ||||||||| |||| ||||||||  ||| | |||||  || || | |||||| ||| |||||||| ||    
T  31703491 tcatgaatacttatgccttcagatctgcaacattgacgacatcaaaatcattgattgtatatacacttattcaaagctaatctttcaatctgaatcaaat 31703392  T
Q  114 aaacaccgcactaagacg 131  Q
    ||| ||  ||||||||||    
T  31703391 aaatactacactaagacg 31703374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 33530311 - 33530360
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgat 68  Q
    ||||||||||||||  ||||||||||||||| ||| ||||| ||||||||    
T  33530311 aatactcatgtctcaggatctgcaacgttgatgacgccaaattcattgat 33530360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 299
Target Start/End: Complemental strand, 37124513 - 37124468
Alignment:
Q  254 tcaaatgagtcttcaactatttctccttcttcacctcttatcagca 299  Q
    |||||||||||||| |||||| |||| ||||||||||| |||||||    
T  37124513 tcaaatgagtcttccactattgctccatcttcacctctcatcagca 37124468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 129
Target Start/End: Complemental strand, 43847307 - 43847238
Alignment:
Q  60 gtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaacaccgcactaaga 129  Q
    ||||||||||  |||| ||||||||| || | |||||| |||||||||||| ||||||||  ||||||||    
T  43847307 gtcattgatcggatctacacttgctcaaatctaatctttcaacctgaatcaaataaacacaacactaaga 43847238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 25112789 - 25112678
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaaca 118  Q
    ||||||| |||||||| | ||||||| ||||||| | |||||| |||||||  || ||||||||||| ||   |||||| |||| | ||||| |||||||    
T  25112789 aatactcgtgtctccaaa-ctgcaacattgacgatatcaaagttattgatcggatatgcacttgctcaaagttaatctttcaacttaaatcaaataaaca 25112691  T
Q  119 ccgcactaagacg 131  Q
     || |||||||||    
T  25112690 tcgtactaagacg 25112678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 68
Target Start/End: Original strand, 35362960 - 35362992
Alignment:
Q  36 atctgcaacgttgacgacaccaaagtcattgat 68  Q
    ||||||||||||||||||| |||||||||||||    
T  35362960 atctgcaacgttgacgacatcaaagtcattgat 35362992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 67; Significance: 9e-30; HSPs: 59)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 25 - 131
Target Start/End: Complemental strand, 25962191 - 25962085
Alignment:
Q  25 catgtctccagatctgcaacgttgacgacaccaaagtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaacaccgcac 124  Q
    ||||||||| ||||| ||||||||||||| | |||||||||||||| |||||||||||||| |||| |||||| |||||||||||| |||||||| ||||    
T  25962191 catgtctccggatctacaacgttgacgacgcaaaagtcattgatcagatctgcacttgctcaaaactaatctttcaacctgaatcaaataaacactgcac 25962092  T
Q  125 taagacg 131  Q
    |||||||    
T  25962091 taagacg 25962085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 24 - 131
Target Start/End: Original strand, 26294899 - 26295012
Alignment:
Q  24 tcatgtctccagatctgcaacgttgacgacaccaaagtca------ttgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaac 117  Q
    |||||||||| ||||||||||||| |||||||||||||||      ||||||| |||||||||||||| |||| ||| || |||||||||||| ||||||    
T  26294899 tcatgtctccggatctgcaacgttaacgacaccaaagtcattgtcattgatcagatctgcacttgctcaaaactaatatttcaacctgaatcaaataaac 26294998  T
Q  118 accgcactaagacg 131  Q
    ||||||||||||||    
T  26294999 accgcactaagacg 26295012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 23 - 131
Target Start/End: Complemental strand, 17331608 - 17331494
Alignment:
Q  23 ctcatgtctccagatctgcaacgttgacgacaccaaagtcattgatcat-------atctgcacttgctccaaacaaatcttccaacctgaatcatataa 115  Q
    ||||||||||| |||||||||||||||||||||||||||||||| ||||       |||||| |||| || |||| |||||| |||||||||||| ||||    
T  17331608 ctcatgtctccggatctgcaacgttgacgacaccaaagtcattg-tcattggtcggatctgctcttgttcaaaactaatctttcaacctgaatcaaataa 17331510  T
Q  116 acaccgcactaagacg 131  Q
    ||||||||||||||||    
T  17331509 acaccgcactaagacg 17331494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 25 - 131
Target Start/End: Complemental strand, 11858186 - 11858076
Alignment:
Q  25 catgtctccagatctgcaacgttgacgacaccaaagtcattgatc-at---atctgcacttgctccaaacaaatcttccaacctgaatcatataaacacc 120  Q
    ||||||||| ||||||||||||||||||| || |||||||||||| ||   |||||||||||||| ||   |||||| |||||||||||| |||||||||    
T  11858186 catgtctccggatctgcaacgttgacgacgcctaagtcattgatcgatcggatctgcacttgctcaaagttaatctttcaacctgaatcaaataaacacc 11858087  T
Q  121 gcactaagacg 131  Q
    |||||||||||    
T  11858086 gcactaagacg 11858076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 6635532 - 6635414
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtc------attgatcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||      |||||||  ||||||| |||||| || | |||||| |||| ||||||| |    
T  6635532 aatactcatgtctccggatctgcaacgttgacgacgccaaagtcattgtcattgatcggatctgcatttgctcaaagctaatctttcaacttgaatcaaa 6635433  T
Q  113 taaacaccgcactaagacg 131  Q
    |||||||||||||||||||    
T  6635432 taaacaccgcactaagacg 6635414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 980866 - 980984
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgatcat-------atctgcacttgctccaaacaaatcttccaacctgaatcat 111  Q
    ||||||| ||||||||||  || ||||||||||||||||||||||||| ||||       |||||||||||||| || | |||||| ||||||||||||     
T  980866 aatactcttgtctccagacttgtaacgttgacgacaccaaagtcattg-tcattgctcggatctgcacttgctcaaagctaatctttcaacctgaatcaa 980964  T
Q  112 ataaacaccgcactaagacg 131  Q
    ||||||||||||||||||||    
T  980965 ataaacaccgcactaagacg 980984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 129
Target Start/End: Original strand, 7771658 - 7771774
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaa------gtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    ||||||||||||||| ||||||||||||||||||| |||||      ||||||||||  |||||||||||||| ||   |||||| |||| ||||||| |    
T  7771658 aatactcatgtctccggatctgcaacgttgacgacgccaaagtcattgtcattgatcggatctgcacttgctcaaagttaatctttcaacttgaatcaaa 7771757  T
Q  113 taaacaccgcactaaga 129  Q
    |||||||||||||||||    
T  7771758 taaacaccgcactaaga 7771774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 21 - 131
Target Start/End: Original strand, 17096080 - 17096196
Alignment:
Q  21 tactcatgtctccagatctgcaacgttgacgacaccaaa------gtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatata 114  Q
    ||||||||| |||||||||||| ||||||||||||||||      ||||||||||  ||||||| |||||| || | |||||| |||||||||||| |||    
T  17096080 tactcatgtttccagatctgcaccgttgacgacaccaaagtcattgtcattgatcggatctgcatttgctcaaagctaatctttcaacctgaatcaaata 17096179  T
Q  115 aacaccgcactaagacg 131  Q
    ||||||| |||||||||    
T  17096180 aacaccgtactaagacg 17096196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 22 - 131
Target Start/End: Original strand, 3079174 - 3079289
Alignment:
Q  22 actcatgtctccagatctgcaacgttgacgacaccaaa------gtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataa 115  Q
    |||||||||| ||||||||||||||||||||| |||||      ||||||||||  |||||||||||||| || |||||||| ||||  |||||| ||||    
T  3079174 actcatgtcttcagatctgcaacgttgacgacgccaaagtcattgtcattgatcggatctgcacttgctcaaagcaaatctttcaactcgaatcaaataa 3079273  T
Q  116 acaccgcactaagacg 131  Q
    ||| ||||||||||||    
T  3079274 acatcgcactaagacg 3079289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 23428536 - 23428418
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattg------atcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    ||||||||||||||| ||||| ||||||||||||| ||||||||||||      |||  |||| ||||||||| || | |||||| | |||||||||| |    
T  23428536 aatactcatgtctccggatctacaacgttgacgacgccaaagtcattgtcattgatcggatctacacttgctcaaagctaatctttctacctgaatcaaa 23428437  T
Q  113 taaacaccgcactaagacg 131  Q
    |||||||||||||||||||    
T  23428436 taaacaccgcactaagacg 23428418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 19 - 129
Target Start/End: Complemental strand, 12215410 - 12215301
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaaca 118  Q
    ||||||||||||  | ||||||||||||||||||| | |||||||||||||  || ||||||||||| |||| |||||| ||| || ||||| |||||||    
T  12215410 aatactcatgtcgtcggatctgcaacgttgacgacgcaaaagtcattgatcggatatgcacttgctcaaaactaatctttcaa-ctaaatcaaataaaca 12215312  T
Q  119 ccgcactaaga 129  Q
    ||||| |||||    
T  12215311 ccgcattaaga 12215301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 19 - 182
Target Start/End: Complemental strand, 20483470 - 20483301
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtc------attgatcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||      |||||||  ||||||||||| || || | |||||| |||| ||| ||| |    
T  20483470 aatactcatgtcttcagatctgcaacgttgacgacgccaaagtcattgtcattgatcggatctgcacttgatcaaagctaatctttcaacttgagtcaaa 20483371  T
Q  113 taaacaccgcactaagacgnnnnnnnnnnnncacaccacacaacgacgagaaatcaaaacaaatagagtt 182  Q
    ||||||||| |||||||||            |||||||||||| ||||| ||||||||||||| ||||||    
T  20483370 taaacaccgtactaagacgggaaatcaaaaacacaccacacaaagacgataaatcaaaacaaacagagtt 20483301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 124
Target Start/End: Original strand, 177941 - 178051
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaa------gtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    ||||||||||||||| |||||||||||||||| || |||||      ||||||||||| |||| |||||||| ||| | |||||| |||||||||||| |    
T  177941 aatactcatgtctccggatctgcaacgttgacaacgccaaagtcattgtcattgatcagatctacacttgct-caagctaatctttcaacctgaatcaaa 178039  T
Q  113 taaacaccgcac 124  Q
    ||||||||||||    
T  178040 taaacaccgcac 178051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 129
Target Start/End: Complemental strand, 17687483 - 17687373
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaaca 118  Q
    ||||||||||||||| |||||||||| |||| |||  ||||||||||||||  || |||| |||||| ||   |||||| ||| |||||||| |||||||    
T  17687483 aatactcatgtctccggatctgcaacattgatgacgtcaaagtcattgatcggatatgcatttgctcaaatttaatctttcaatctgaatcaaataaaca 17687384  T
Q  119 ccgcactaaga 129  Q
    ||| |||||||    
T  17687383 ccgtactaaga 17687373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 23881953 - 23882070
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattg------atcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    ||||||||||||||| ||||| |||| |||||||| ||||||||||||      |||  ||||| |||||||| ||   |||||| |||||||||||| |    
T  23881953 aatactcatgtctccggatctacaacattgacgacgccaaagtcattgtcattgatcggatctgtacttgctcaaagttaatctttcaacctgaatcaaa 23882052  T
Q  113 taaacaccgcactaagac 130  Q
    ||||||||||||||||||    
T  23882053 taaacaccgcactaagac 23882070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 19 - 124
Target Start/End: Complemental strand, 7151089 - 7150984
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaaca 118  Q
    |||||| |||||||  ||||||||||||||| ||| |||||||||||||||  || || |||| ||| |||| | |||| |||||||||||| |||||||    
T  7151089 aatactaatgtctctggatctgcaacgttgatgacgccaaagtcattgatcgaatttgtacttactcaaaaccagtctttcaacctgaatcaaataaaca 7150990  T
Q  119 ccgcac 124  Q
     |||||    
T  7150989 tcgcac 7150984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 23 - 131
Target Start/End: Original strand, 33164310 - 33164423
Alignment:
Q  23 ctcatgtctccagatctgcaacgttgacgacaccaaa-----gtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaac 117  Q
    ||||||||||| ||||||||||||||||||| | ||      ||||||||||  |||||| |||| || || | |||||| |||||||||||| ||||||    
T  33164310 ctcatgtctccggatctgcaacgttgacgacgcaaagtcattgtcattgatcggatctgctcttgttcaaagctaatctttcaacctgaatcaaataaac 33164409  T
Q  118 accgcactaagacg 131  Q
    ||||||||||||||    
T  33164410 accgcactaagacg 33164423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 34431341 - 34431227
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaa-----gtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatat 113  Q
    |||||||||||||||||||||| ||||||||||||  |||      ||||||||||  |||||||||||||| ||   |||||  |||||||||||| ||    
T  34431341 aatactcatgtctccagatctgtaacgttgacgacgacaagtcattgtcattgatcggatctgcacttgctcaaagttaatct--caacctgaatcaaat 34431244  T
Q  114 aaacaccgcactaagac 130  Q
    |||||||||||||||||    
T  34431243 aaacaccgcactaagac 34431227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 19 - 129
Target Start/End: Original strand, 39531249 - 39531363
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaag----tcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatata 114  Q
    ||||||||||||||  ||||||||||||||||||| ||||||    |||||||||  |||||||||| ||| || | |||||| ||||| |||||| |||    
T  39531249 aatactcatgtctctggatctgcaacgttgacgacgccaaagtcattcattgatcggatctgcactttctcaaagctaatctttcaacccgaatcaaata 39531348  T
Q  115 aacaccgcactaaga 129  Q
    |||| || |||||||    
T  39531349 aacatcgtactaaga 39531363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 2555187 - 2555305
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaa------gtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    ||||||||||||||| ||||||||||||||| |||  ||||      ||||||||||  |||||||||| ||| || | ||| || |||||||||||| |    
T  2555187 aatactcatgtctccggatctgcaacgttgatgacgtcaaagtcattgtcattgatcggatctgcactttctcaaagctaatatttcaacctgaatcaaa 2555286  T
Q  113 taaacaccgcactaagacg 131  Q
    |||||||| ||||||||||    
T  2555287 taaacaccacactaagacg 2555305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 60 - 131
Target Start/End: Complemental strand, 6281281 - 6281210
Alignment:
Q  60 gtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaacaccgcactaagacg 131  Q
    ||||||||||  |||||||||||||| || | |||||| |||||||||||| ||||||| ||||||||||||    
T  6281281 gtcattgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacatcgcactaagacg 6281210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 6681713 - 6681831
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaa------gtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    |||||||||||||||  ||||||||||||||||||||||||      ||||||||||  || ||| ||| ||| |||| |||||| ||||||| | || |    
T  6681713 aatactcatgtctccgaatctgcaacgttgacgacaccaaaatcattgtcattgatcggatttgcgcttactcaaaactaatctttcaacctggaacaaa 6681812  T
Q  113 taaacaccgcactaagacg 131  Q
    |||||| ||||||||||||    
T  6681813 taaacatcgcactaagacg 6681831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 131
Target Start/End: Complemental strand, 29098069 - 29097955
Alignment:
Q  23 ctcatgtctccagatctgcaacgttgacgacaccaaa------gtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaa 116  Q
    ||||||||||  ||||||||||||||||||| |||||      ||||||||||  |||||| |||| || || | ||| || |||||||||||| |||||    
T  29098069 ctcatgtctcttgatctgcaacgttgacgacgccaaaatcattgtcattgatcggatctgctcttgttcaaagctaatttttcaacctgaatcaaataaa 29097970  T
Q  117 caccgcactaagacg 131  Q
    |||||||||||||||    
T  29097969 caccgcactaagacg 29097955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 32347551 - 32347669
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaa------gtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    ||||||||||||||| ||||||||| ||||||||| |||||      ||||| ||||  |||||||||||||| || | |||||| |||| ||||| | |    
T  32347551 aatactcatgtctccggatctgcaatgttgacgacgccaaagttattgtcatcgatcggatctgcacttgctcaaagctaatctttcaacttgaattaaa 32347650  T
Q  113 taaacaccgcactaagacg 131  Q
    ||||||||| |||||||||    
T  32347651 taaacaccgtactaagacg 32347669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 126
Target Start/End: Complemental strand, 39915771 - 39915664
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaaca 118  Q
    ||||| |||||||||  |||| |||||||||||||  |||||| ||||||   || ||||||||||| || | |||||| |||||||||| | |||||||    
T  39915771 aatacacatgtctccgaatcttcaacgttgacgacgtcaaagttattgattggatatgcacttgctcaaagctaatctttcaacctgaataaaataaaca 39915672  T
Q  119 ccgcacta 126  Q
    ||||||||    
T  39915671 ccgcacta 39915664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 200 - 238
Target Start/End: Original strand, 8544363 - 8544401
Alignment:
Q  200 attgtcaattttctaaatattgtgcacatctttttaatt 238  Q
    |||||||||||||||||||||||||||||||||||||||    
T  8544363 attgtcaattttctaaatattgtgcacatctttttaatt 8544401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 129
Target Start/End: Complemental strand, 14535176 - 14535066
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaaca 118  Q
    ||||||||||| ||| ||||||||||||||| ||| | ||||||||||||   |||| |||||| || || | |||||| ||| | |||||| |||||||    
T  14535176 aatactcatgtatccggatctgcaacgttgatgacgcaaaagtcattgattgaatctacacttgatcaaagccaatctttcaatccgaatcaaataaaca 14535077  T
Q  119 ccgcactaaga 129  Q
    ||||| |||||    
T  14535076 ccgcattaaga 14535066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 129
Target Start/End: Original strand, 17732223 - 17732339
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaa------gtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    ||||||||||||| | ||||||||| ||||||||| |||||      ||||||||||  || | ||||||||| || | |||||| |||| ||||||| |    
T  17732223 aatactcatgtctacggatctgcaaggttgacgacgccaaagtcattgtcattgatcggatttacacttgctcaaagctaatctttcaacttgaatcaaa 17732322  T
Q  113 taaacaccgcactaaga 129  Q
    |||||||||||||||||    
T  17732323 taaacaccgcactaaga 17732339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 18472562 - 18472611
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgat 68  Q
    ||||||||||||||||||||| |||||||||||||  |||||||||||||    
T  18472562 aatactcatgtctccagatctacaacgttgacgactacaaagtcattgat 18472611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 17523365 - 17523477
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaaca 118  Q
    ||||||||||| | | |||||||||||||||| |  | ||||||||| ||   || |||||||| || |||| |||||| | |||||||||| |||||||    
T  17523365 aatactcatgttttcggatctgcaacgttgacaatgcaaaagtcattaattgaatttgcacttgatcaaaactaatctttcgacctgaatcaaataaaca 17523464  T
Q  119 ccgcactaagacg 131  Q
    ||||| |||||||    
T  17523465 ccgcaataagacg 17523477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 22 - 131
Target Start/End: Complemental strand, 17699834 - 17699719
Alignment:
Q  22 actcatgtctccagatctgcaacgttgacgacaccaaagt------cattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataa 115  Q
    |||||| ||||| |||||||||| |||||||| |||||||      ||||||||| ||||| |||||||| || | |||||| |||||||||||| ||||    
T  17699834 actcatttctccggatctgcaacattgacgacgccaaagttattgtcattgatcagatctgtacttgctcaaagctaatctttcaacctgaatcaaataa 17699735  T
Q  116 acaccgcactaagacg 131  Q
    ||   |||||||||||    
T  17699734 acgatgcactaagacg 17699719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 32309442 - 32309330
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaaca 118  Q
    |||| |||||||| |  ||||| |||||||||||||| ||||||||||||   || ||||||||||| ||   |||||| |||||||||||| ||||| |    
T  32309442 aatattcatgtcttccaatctgtaacgttgacgacacaaaagtcattgattcgatttgcacttgctcaaagttaatcttacaacctgaatcaaataaata 32309343  T
Q  119 ccgcactaagacg 131  Q
     || |||||||||    
T  32309342 tcgtactaagacg 32309330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 66
Target Start/End: Original strand, 42396350 - 42396397
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattg 66  Q
    ||||||||||||||  ||||||||||||||||||| ||||||||||||    
T  42396350 aatactcatgtctcaggatctgcaacgttgacgacgccaaagtcattg 42396397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 131
Target Start/End: Original strand, 11734665 - 11734774
Alignment:
Q  28 gtctccagatctgcaacgttgacgacaccaaa------gtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaacaccg 121  Q
    |||||| ||||||||||||||||||| |||||      ||||||||||  ||||||| |||| | || | |||||| ||| |||||||| ||||||| ||    
T  11734665 gtctccggatctgcaacgttgacgacgccaaagtcattgtcattgatcggatctgcagttgcgcaaagctaatctttcaatctgaatcaaataaacatcg 11734764  T
Q  122 cactaagacg 131  Q
    ||||||||||    
T  11734765 cactaagacg 11734774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 238
Target Start/End: Original strand, 12436376 - 12436410
Alignment:
Q  204 tcaattttctaaatattgtgcacatctttttaatt 238  Q
    |||||||||||||||||||||||||||||||||||    
T  12436376 tcaattttctaaatattgtgcacatctttttaatt 12436410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 234
Target Start/End: Original strand, 18413003 - 18413037
Alignment:
Q  200 attgtcaattttctaaatattgtgcacatcttttt 234  Q
    |||||||||||||||||||||||||||||||||||    
T  18413003 attgtcaattttctaaatattgtgcacatcttttt 18413037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 126
Target Start/End: Complemental strand, 18654019 - 18653953
Alignment:
Q  60 gtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaacaccgcacta 126  Q
    ||||||||||  |||||||||||||| || | ||| || |||||||||||| |||||||||||||||    
T  18654019 gtcattgatcggatctgcacttgctcaaacctaatttttcaacctgaatcaaataaacaccgcacta 18653953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 37219282 - 37219232
Alignment:
Q  18 caatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgat 68  Q
    |||||| ||||||||| |||||||||| |||||||| ||||||||||||||    
T  37219282 caatacacatgtctccggatctgcaacattgacgactccaaagtcattgat 37219232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 238
Target Start/End: Original strand, 42673709 - 42673747
Alignment:
Q  200 attgtcaattttctaaatattgtgcacatctttttaatt 238  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  42673709 attgtcaattttttaaatattgtgcacatctttttaatt 42673747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 4726764 - 4726813
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgat 68  Q
    |||| |||||||||| |||||||||||| || ||||||||||||||||||    
T  4726764 aatagtcatgtctccggatctgcaacgtagatgacaccaaagtcattgat 4726813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 72 - 129
Target Start/End: Complemental strand, 12891901 - 12891844
Alignment:
Q  72 atctgcacttgctccaaacaaatcttccaacctgaatcatataaacaccgcactaaga 129  Q
    |||||||||||||| || | |||||| ||||||| |||| ||||||||||||||||||    
T  12891901 atctgcacttgctcaaagctaatctttcaacctggatcaaataaacaccgcactaaga 12891844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 34874138 - 34874093
Alignment:
Q  20 atactcatgtctccagatctgcaacgttgacgacaccaaagtcatt 65  Q
    |||||||||||||| ||| ||||||||||||||| |||||||||||    
T  34874138 atactcatgtctccggatatgcaacgttgacgacgccaaagtcatt 34874093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 24 - 126
Target Start/End: Original strand, 39179670 - 39179778
Alignment:
Q  24 tcatgtctccagatctgcaacgttgacgacaccaaagtcattg------atcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaac 117  Q
    |||||| ||| ||| ||||||||||||||| ||||||||||||      |||  |||| ||||||||| || | | |||| |||||||||||| ||||||    
T  39179670 tcatgtatccggatttgcaacgttgacgacgccaaagtcattgtcattgatcggatctacacttgctcaaagctagtctttcaacctgaatcaaataaac 39179769  T
Q  118 accgcacta 126  Q
    |||||||||    
T  39179770 accgcacta 39179778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 40775039 - 40774990
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgat 68  Q
    ||||| ||||||||| ||||||||||||||| ||| ||||||||||||||    
T  40775039 aatacccatgtctccggatctgcaacgttgaagactccaaagtcattgat 40774990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 41554765 - 41554716
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgat 68  Q
    ||||| ||||||||| ||||||||||||||||||  ||||||||||||||    
T  41554765 aatacccatgtctccggatctgcaacgttgacgattccaaagtcattgat 41554716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 290
Target Start/End: Complemental strand, 17200413 - 17200377
Alignment:
Q  254 tcaaatgagtcttcaactatttctccttcttcacctc 290  Q
    ||||| |||||||||||||||||||||||||||||||    
T  17200413 tcaaacgagtcttcaactatttctccttcttcacctc 17200377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 60 - 131
Target Start/End: Complemental strand, 3740594 - 3740523
Alignment:
Q  60 gtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaacaccgcactaagacg 131  Q
    ||||||||||  ||||||| |||||| || | |||||| |||||||||| | |||||||||||||| |||||    
T  3740594 gtcattgatcggatctgcagttgctcaaagctaatctttcaacctgaattaaataaacaccgcactcagacg 3740523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 25 - 68
Target Start/End: Complemental strand, 20270986 - 20270943
Alignment:
Q  25 catgtctccagatctgcaacgttgacgacaccaaagtcattgat 68  Q
    ||||||||| ||||||||||||||| ||| ||||||||||||||    
T  20270986 catgtctccggatctgcaacgttgaagactccaaagtcattgat 20270943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 19 - 66
Target Start/End: Original strand, 33486405 - 33486452
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattg 66  Q
    ||||| |||| |||| ||||||||||||||||||| ||||||||||||    
T  33486405 aatacccatgcctccggatctgcaacgttgacgactccaaagtcattg 33486452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 19 - 66
Target Start/End: Complemental strand, 42609428 - 42609381
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattg 66  Q
    ||||||| || |||| |||||||||||| |||||||||||||||||||    
T  42609428 aatactcctgcctccggatctgcaacgtcgacgacaccaaagtcattg 42609381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 238
Target Start/End: Complemental strand, 6428473 - 6428435
Alignment:
Q  200 attgtcaattttctaaatattgtgcacatctttttaatt 238  Q
    ||||||||||||||||||| |||||| ||||||||||||    
T  6428473 attgtcaattttctaaataatgtgcatatctttttaatt 6428435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 238
Target Start/End: Original strand, 19133277 - 19133311
Alignment:
Q  204 tcaattttctaaatattgtgcacatctttttaatt 238  Q
    ||||||||||||||||||||||||||| |||||||    
T  19133277 tcaattttctaaatattgtgcacatctctttaatt 19133311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 5378580 - 5378531
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgat 68  Q
    |||| |||||||||| |||||||||||| || ||| ||||||||||||||    
T  5378580 aatagtcatgtctccggatctgcaacgtggatgacgccaaagtcattgat 5378531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 6639272 - 6639223
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgat 68  Q
    ||||||||||| ||| ||| ||||||||||||||| | ||||||||||||    
T  6639272 aatactcatgtttccggatgtgcaacgttgacgacgcaaaagtcattgat 6639223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 82
Target Start/End: Original strand, 6647755 - 6647812
Alignment:
Q  25 catgtctccagatctgcaacgttgacgacaccaaagtcattgatcatatctgcacttg 82  Q
    ||||||||| ||||||||||||||| ||| || |||||||||||   |||||||||||    
T  6647755 catgtctccggatctgcaacgttgatgacgccgaagtcattgattggatctgcacttg 6647812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 68
Target Start/End: Original strand, 8811996 - 8812037
Alignment:
Q  27 tgtctccagatctgcaacgttgacgacaccaaagtcattgat 68  Q
    ||||||||||||||||||||||| ||| | ||||||||||||    
T  8811996 tgtctccagatctgcaacgttgatgactctaaagtcattgat 8812037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 14910512 - 14910561
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgat 68  Q
    ||||||||||||||| |||||||| ||||||| ||  |||||||||||||    
T  14910512 aatactcatgtctccggatctgcatcgttgacaacttcaaagtcattgat 14910561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 304
Target Start/End: Original strand, 36437081 - 36437142
Alignment:
Q  243 tcttgtttttctcaaatgagtcttcaactatttctccttcttcacctcttatcagcagttcc 304  Q
    ||||||| || || |||||||||||||||||| || | ||||||||||| ||||||| ||||    
T  36437081 tcttgttcttgtcgaatgagtcttcaactattgcttcatcttcacctctcatcagcaattcc 36437142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 66
Target Start/End: Original strand, 40564999 - 40565040
Alignment:
Q  25 catgtctccagatctgcaacgttgacgacaccaaagtcattg 66  Q
    ||||||||| ||||||||||||||| ||| ||||||||||||    
T  40564999 catgtctccggatctgcaacgttgatgacgccaaagtcattg 40565040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 65; Significance: 1e-28; HSPs: 90)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 5814624 - 5814512
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaaca 118  Q
    ||||||||||||||  ||||||||||||||| ||| |||||||||||||||  |||||||||||||| || | |||||| |||||||||||| |||||||    
T  5814624 aatactcatgtctctggatctgcaacgttgatgacgccaaagtcattgatcgaatctgcacttgctcaaagctaatctttcaacctgaatcaaataaaca 5814525  T
Q  119 ccgcactaagacg 131  Q
    | |||||||||||    
T  5814524 ctgcactaagacg 5814512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 24 - 131
Target Start/End: Complemental strand, 8712803 - 8712696
Alignment:
Q  24 tcatgtctccagatctgcaacgttgacgacaccaaagtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaacaccgca 123  Q
    |||||||||  ||||||||||||||||||| |||||||||||||||  |||||||||||||| || | |||||| |||||||||||| ||||||| ||||    
T  8712803 tcatgtctctggatctgcaacgttgacgacgccaaagtcattgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacatcgca 8712704  T
Q  124 ctaagacg 131  Q
    ||||||||    
T  8712703 ctaagacg 8712696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 8517296 - 8517411
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgatcat----atctgcacttgctccaaacaaatcttccaacctgaatcatata 114  Q
    |||||| |||||||||||||||||| ||||||||||| |||||||||| ||||    |||||||||||||| |||| |||||| |||||| ||||| |||    
T  8517296 aatacttatgtctccagatctgcaatgttgacgacacaaaagtcattg-tcattcggatctgcacttgctcaaaactaatctttcaacctaaatcaaata 8517394  T
Q  115 aacaccgcactaagacg 131  Q
    |||||| ||||||||||    
T  8517395 aacaccacactaagacg 8517411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 31522230 - 31522112
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattg------atcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    ||||||||||||||| ||||||||||||||| ||| ||||||||||||      |||  |||||||||||||| |||| |||||| |||||||||||| |    
T  31522230 aatactcatgtctccggatctgcaacgttgatgacgccaaagtcattgtcattgatcggatctgcacttgctcaaaactaatctttcaacctgaatcaaa 31522131  T
Q  113 taaacaccgcactaagacg 131  Q
    ||||||| |||||||||||    
T  31522130 taaacactgcactaagacg 31522112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 39837879 - 39837761
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaa------gtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    |||||||||||||||||||||||||||||||||   |||||      ||||||||||  |||||||||||||| || ||||| || |||||||||||| |    
T  39837879 aatactcatgtctccagatctgcaacgttgacgttgccaaaatcattgtcattgatcggatctgcacttgctcaaagcaaatatttcaacctgaatcaaa 39837780  T
Q  113 taaacaccgcactaagacg 131  Q
    |||||||||||||||||||    
T  39837779 taaacaccgcactaagacg 39837761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 42197837 - 42197719
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcatt------gatcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||||      ||||  |||||||||||||| ||   |||||| |||||||||||| |    
T  42197837 aatactcatgtctccggatttgcaacgttgacgacaccaaagtcattgtcatcgatcggatctgcacttgctcaaagataatctttcaacctgaatcaaa 42197738  T
Q  113 taaacaccgcactaagacg 131  Q
    |||||||||||||||||||    
T  42197737 taaacaccgcactaagacg 42197719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 7083649 - 7083771
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaa------gtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatc--- 109  Q
    |||||||||||||||||||||||||||||||||||||||||      ||||||||||  |||||||||||||| || | |||||| |||||||||||       
T  7083649 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgtcattgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaa 7083748  T
Q  110 -atataaacaccgcactaagacg 131  Q
     ||||||||||||||||| ||||    
T  7083749 tatataaacaccgcactaggacg 7083771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 13586077 - 13586195
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaa------gtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    ||||||||||||| | |||||||||||||||| || |||||      ||||||||||  |||||||||||||| || | |||||| |||||||||||| |    
T  13586077 aatactcatgtcttctgatctgcaacgttgactacgccaaaatcattgtcattgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaa 13586176  T
Q  113 taaacaccgcactaagacg 131  Q
    |||||||||||||||||||    
T  13586177 taaacaccgcactaagacg 13586195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 20 - 131
Target Start/End: Original strand, 56236666 - 56236777
Alignment:
Q  20 atactcatgtctccagatctgcaacgttgacgacaccaaagtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaacac 119  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||  |||||| ||||||| ||   |||||| |||| ||||||| ||||| ||    
T  56236666 atactcatgtctccggatctgcaacgttgacgacgccaaagtcattgatcggatctgcgcttgctcaaagttaatctttcaacttgaatcaaataaatac 56236765  T
Q  120 cgcactaagacg 131  Q
    || | |||||||    
T  56236766 cgtattaagacg 56236777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 22757378 - 22757261
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattg------atcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    ||||||||||||||| ||| ||||||||||||||| ||||||||||||      |||  ||||||| |||||| || | |||||| |||||||||||| |    
T  22757378 aatactcatgtctccggatttgcaacgttgacgacgccaaagtcattgtcattgatcggatctgcatttgctcaaagctaatctttcaacctgaatcaaa 22757279  T
Q  113 taaacaccgcactaagac 130  Q
    ||||||||||||||||||    
T  22757278 taaacaccgcactaagac 22757261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 25 - 131
Target Start/End: Complemental strand, 24100418 - 24100306
Alignment:
Q  25 catgtctccagatctgcaacgttgacgacaccaaagtc------attgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaaca 118  Q
    ||||||||| ||||||||||||||||||||||||||||      |||||||  |||| ||||||||| || | |||||| |||||||||||| |||||||    
T  24100418 catgtctccggatctgcaacgttgacgacaccaaagtcattgtcattgatcggatctacacttgctcaaagctaatctttcaacctgaatcaaataaaca 24100319  T
Q  119 ccgcactaagacg 131  Q
    || ||||||||||    
T  24100318 ccacactaagacg 24100306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 19 - 126
Target Start/End: Original strand, 626387 - 626500
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgatcat-------atctgcacttgctccaaacaaatcttccaacctgaatcat 111  Q
    ||||||||||||| ||||||||||| || ||||||||||||||||||| ||||       |||||||||||||| || | |||||| ||||||||||||     
T  626387 aatactcatgtcttcagatctgcaatgtcgacgacaccaaagtcattg-tcattggtcggatctgcacttgctcaaagctaatctttcaacctgaatcaa 626485  T
Q  112 ataaacaccgcacta 126  Q
    |||||||||||||||    
T  626486 ataaacaccgcacta 626500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 7060607 - 7060489
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagt------cattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    ||||||||||||||  ||||||||||||||| ||| |||||||      ||||||||  |||||||||||||| || | |||||| |||||||||||| |    
T  7060607 aatactcatgtctctggatctgcaacgttgatgacgccaaagtaattgtcattgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaa 7060508  T
Q  113 taaacaccgcactaagacg 131  Q
    ||||||||||| |||||||    
T  7060507 taaacaccgcattaagacg 7060489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 20399740 - 20399858
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaa------gtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    ||||||| |||||||||||||||||||||||||||  ||||      ||||||||||  || ||||||||||| || | |||||| ||| |||||||| |    
T  20399740 aatactcgtgtctccagatctgcaacgttgacgacgacaaagtcattgtcattgatcggatttgcacttgctcaaagctaatctttcaaactgaatcaaa 20399839  T
Q  113 taaacaccgcactaagacg 131  Q
    |||||||||||||||||||    
T  20399840 taaacaccgcactaagacg 20399858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 26742300 - 26742418
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaa------gtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    ||||| ||||| ||||||||||||||||||||||| |||||      ||||||||||  |||| ||||||||| || | |||||| ||| |||||||| |    
T  26742300 aatacccatgtgtccagatctgcaacgttgacgactccaaagtcattgtcattgatcggatctacacttgctcaaagctaatctttcaatctgaatcaaa 26742399  T
Q  113 taaacaccgcactaagacg 131  Q
    |||||||||||||||||||    
T  26742400 taaacaccgcactaagacg 26742418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 32616696 - 32616814
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtca------ttgatcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    |||| ||||| |||| ||||||||||||||||||  |||||||||      ||||||| |||||||||||||| || | |||||| |||| ||||||| |    
T  32616696 aataatcatgactccggatctgcaacgttgacgatgccaaagtcattgtcattgatcagatctgcacttgctcaaagctaatctttcaacttgaatcaaa 32616795  T
Q  113 taaacaccgcactaagacg 131  Q
    |||||||||||||||||||    
T  32616796 taaacaccgcactaagacg 32616814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 36124185 - 36124303
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattg------atcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    ||||||||||| ||| |||||||||||||||| || ||||||||||||      |||  || ||||||||||| || | |||||| |||||||||||| |    
T  36124185 aatactcatgtttccggatctgcaacgttgacaacgccaaagtcattgtcattgatcgaatttgcacttgctcaaagctaatctttcaacctgaatcaaa 36124284  T
Q  113 taaacaccgcactaagacg 131  Q
    |||||||||||||||||||    
T  36124285 taaacaccgcactaagacg 36124303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 38943985 - 38944103
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattg------atcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    ||||||| ||||||| |||||||||||||||| || ||||||||||||      |||  |||||||||||||| || | | |||| |||||||||||| |    
T  38943985 aatactcgtgtctccggatctgcaacgttgacaacgccaaagtcattgtccttgatcggatctgcacttgctcaaagctattctttcaacctgaatcaaa 38944084  T
Q  113 taaacaccgcactaagacg 131  Q
    |||||||||||||||||||    
T  38944085 taaacaccgcactaagacg 38944103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 20 - 131
Target Start/End: Complemental strand, 6882239 - 6882122
Alignment:
Q  20 atactcatgtctccagatctgcaacgttgacgacaccaaagt------cattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatat 113  Q
    |||||||||||||| |||||||||||||||||||  ||||||      ||||||||  ||||||||||||||  | | |||||| |||||||||||| ||    
T  6882239 atactcatgtctccggatctgcaacgttgacgacgacaaagttattgtcattgatcggatctgcacttgctcatagctaatctttcaacctgaatcaaat 6882140  T
Q  114 aaacaccgcactaagacg 131  Q
    |||||||||| |||||||    
T  6882139 aaacaccgcattaagacg 6882122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 35 - 181
Target Start/End: Original strand, 12716976 - 12717122
Alignment:
Q  35 gatctgcaacgttgacgacaccaaagtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaacaccgcactaagacgnnn 134  Q
    |||||||||||   ||||| ||||||||||| |||| ||||||||||  || || | |||| | |||||||||||| ||||||||||||||||||||       
T  12716976 gatctgcaacggctacgacgccaaagtcattaatcagatctgcacttaatcaaagctaatccttcaacctgaatcaaataaacaccgcactaagacggaa 12717075  T
Q  135 nnnnnnnnncacaccacacaacgacgagaaatcaaaacaaatagagt 181  Q
             |||||| ||||| |||||||||||||||||||||||||    
T  12717076 aatcaaaaacacaccgcacaaagacgagaaatcaaaacaaatagagt 12717122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 24 - 131
Target Start/End: Complemental strand, 13965839 - 13965726
Alignment:
Q  24 tcatgtctccagatctgcaacgttgacgacaccaaagt------cattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaac 117  Q
    |||||||||| ||||| ||||||||||||| |||||||      ||||||||  |||||||||||||| || | |||||| |||||| ||||| ||||||    
T  13965839 tcatgtctccggatctacaacgttgacgacgccaaagttattgtcattgatcggatctgcacttgctcaaagctaatctttcaacctaaatcaaataaac 13965740  T
Q  118 accgcactaagacg 131  Q
    ||||||||||||||    
T  13965739 accgcactaagacg 13965726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 24 - 131
Target Start/End: Complemental strand, 50801496 - 50801383
Alignment:
Q  24 tcatgtctccagatctgcaacgttgacgacaccaaagtcattg------atcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaac 117  Q
    |||||||||| ||||||||||||||||||   |||||||||||      |||| |||||||||||||| |||  |||||| |||||||||||| ||||||    
T  50801496 tcatgtctccggatctgcaacgttgacgatgtcaaagtcattgtcattgatcagatctgcacttgctcaaaattaatctttcaacctgaatcaaataaac 50801397  T
Q  118 accgcactaagacg 131  Q
    || |||||||||||    
T  50801396 acagcactaagacg 50801383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 29 - 131
Target Start/End: Complemental strand, 24825923 - 24825815
Alignment:
Q  29 tctccagatctgcaacgttgacgacaccaaagtcattg------atcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaacaccgc 122  Q
    ||||| ||||||||||||||||||| ||||||||||||      |||  |||||||||||||| || | |||||| |||||||||||| ||||| |||||    
T  24825923 tctccggatctgcaacgttgacgacgccaaagtcattgtcattgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaagaccgc 24825824  T
Q  123 actaagacg 131  Q
    |||||||||    
T  24825823 actaagacg 24825815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 21 - 131
Target Start/End: Complemental strand, 29923117 - 29923001
Alignment:
Q  21 tactcatgtctccagatctgcaacgttgacgacaccaaagtcattg------atcatatctgcacttgctccaaacaaatcttccaacctgaatcatata 114  Q
    ||||||||| ||| |||||||||| |||||||||||||||||||||      |||  ||||||||||||||  | | |||||| |||||||||||| |||    
T  29923117 tactcatgtttccggatctgcaacattgacgacaccaaagtcattgtcattgatcggatctgcacttgctcatagctaatctttcaacctgaatcaaata 29923018  T
Q  115 aacaccgcactaagacg 131  Q
    ||||||| |||||||||    
T  29923017 aacaccgtactaagacg 29923001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 20 - 129
Target Start/End: Original strand, 55600381 - 55600490
Alignment:
Q  20 atactcatgtctccagatctgcaacgttgacgacaccaaagtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaacac 119  Q
    |||||||||||||| ||||||||||||||||||| | ||| ||||||||   |||||| ||||||| || | |||||| ||| | |||||| ||||||||    
T  55600381 atactcatgtctccggatctgcaacgttgacgacgctaaaatcattgattggatctgcgcttgctcaaagctaatctttcaagcggaatcaaataaacac 55600480  T
Q  120 cgcactaaga 129  Q
    || |||||||    
T  55600481 cgtactaaga 55600490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 22049247 - 22049359
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaaca 118  Q
    ||||||||||||| | |||||| ||||||| |||| |||||||||||||||  |||||||||||||  ||   ||||||| | ||| ||| | |||||||    
T  22049247 aatactcatgtcttctgatctgtaacgttggcgactccaaagtcattgatcggatctgcacttgcttaaagttaatcttcaatcctaaataaaataaaca 22049346  T
Q  119 ccgcactaagacg 131  Q
    |||||||||||||    
T  22049347 ccgcactaagacg 22049359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 394111 - 394229
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattg------atcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    ||||||||||||||| | ||||||||||||||||| | ||||||||||      |||  |||| ||||||||| ||   |||||| |||||||||||| |    
T  394111 aatactcatgtctccggttctgcaacgttgacgacgctaaagtcattgtcattgatcggatctacacttgctcaaagttaatctttcaacctgaatcaaa 394210  T
Q  113 taaacaccgcactaagacg 131  Q
    |||||||||||||||||||    
T  394211 taaacaccgcactaagacg 394229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 6082267 - 6082366
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaaca 118  Q
    ||||||||||| ||| ||||||||||||||||||  ||||| ||||||| |  |||||||||||||| || | |||||| |||||| ||||| |||||||    
T  6082267 aatactcatgtttccggatctgcaacgttgacgatgccaaaatcattgaccgaatctgcacttgctcaaagctaatctttcaacctaaatcaaataaaca 6082366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 19745673 - 19745555
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattg------atcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    ||||||||||||||| |||||||||| |||||||| | ||||||||||      |||  |||||||||||||| || | |||||| |||||||||||| |    
T  19745673 aatactcatgtctcccgatctgcaacattgacgacgctaaagtcattgtcattaatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaa 19745574  T
Q  113 taaacaccgcactaagacg 131  Q
     ||||||| ||||||||||    
T  19745573 caaacacctcactaagacg 19745555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 19794133 - 19794251
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattg------atcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    ||||||||||||||| |||||||||| |||||||| | ||||||||||      |||  |||||||||||||| || | |||||| |||||||||||| |    
T  19794133 aatactcatgtctcccgatctgcaacattgacgacgctaaagtcattgtcattaatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaa 19794232  T
Q  113 taaacaccgcactaagacg 131  Q
     ||||||| ||||||||||    
T  19794233 caaacacctcactaagacg 19794251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 24611637 - 24611754
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtca------ttgatcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    |||||| |||||| ||||| ||||||||||||||| |||||||||      ||||||| |||||||||||||| ||   |||||| |||||||||||| |    
T  24611637 aatacttatgtcttcagatttgcaacgttgacgacgccaaagtcattgtcattgatcagatctgcacttgctcaaagttaatctttcaacctgaatcaaa 24611736  T
Q  113 taaacaccgcactaagacg 131  Q
    | |||||||||||||||||    
T  24611737 t-aacaccgcactaagacg 24611754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 26674656 - 26674538
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtc------attgatcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    ||||||||||||| | ||||||||||||||||||| ||||||||      |||||||  |||||||||||||| || | |||||| |||||||||||| |    
T  26674656 aatactcatgtcttcggatctgcaacgttgacgacgccaaagtcattgtcattgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaa 26674557  T
Q  113 taaacaccgcactaagacg 131  Q
    ||| |||  ||||||||||    
T  26674556 taagcacgacactaagacg 26674538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 27395114 - 27394996
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattg------atcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    ||||||||||||||||  ||||| || |||||||| ||||||||||||      |||  |||||||||||||  || | |||||| |||||||||||| |    
T  27395114 aatactcatgtctccatgtctgctacattgacgacgccaaagtcattgtcattgatcggatctgcacttgcttaaagctaatctttcaacctgaatcaaa 27395015  T
Q  113 taaacaccgcactaagacg 131  Q
    |||||||||||||||||||    
T  27395014 taaacaccgcactaagacg 27394996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 43244218 - 43244336
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaa------gtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    ||||||||||||||| ||||||||||||||||||  |||||      ||||||||||  || ||||||||||| || | |||||| |||| ||||| | |    
T  43244218 aatactcatgtctccggatctgcaacgttgacgatgccaaagtcattgtcattgatcggatatgcacttgctcaaagctaatctttcaacttgaatgaaa 43244317  T
Q  113 taaacaccgcactaagacg 131  Q
    |||||||||||||||||||    
T  43244318 taaacaccgcactaagacg 43244336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 477849 - 477967
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgatcat-------atctgcacttgctccaaacaaatcttccaacctgaatcat 111  Q
    ||||||||||||||| ||||||||| ||||  ||| |||||||||||| ||||       |||||||||||||| || | ||| || ||||||||||||     
T  477849 aatactcatgtctccggatctgcaatgttgtagacgccaaagtcattg-tcattgattggatctgcacttgctcaaagctaatttttcaacctgaatcaa 477947  T
Q  112 ataaacaccgcactaagacg 131  Q
    ||||||||||||||||||||    
T  477948 ataaacaccgcactaagacg 477967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 60 - 131
Target Start/End: Complemental strand, 39523647 - 39523575
Alignment:
Q  60 gtcattgatcatatctgcacttgctccaaa-caaatcttccaacctgaatcatataaacaccgcactaagacg 131  Q
    ||||||||||  |||||||||||||| ||| | |||||| |||||||||||| ||||||||||||||||||||    
T  39523647 gtcattgatcggatctgcacttgctcaaaaactaatctttcaacctgaatcaaataaacaccgcactaagacg 39523575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 2448084 - 2447966
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagt------cattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    |||||||||||||| |||||||||| ||||||||| |||||||      |||||||   |||||||||||||| ||   |||||| |||| | ||||| |    
T  2448084 aatactcatgtctctagatctgcaatgttgacgacgccaaagtcattctcattgattgaatctgcacttgctcaaagttaatctttcaacataaatcaaa 2447985  T
Q  113 taaacaccgcactaagacg 131  Q
    |||||||||||||||||||    
T  2447984 taaacaccgcactaagacg 2447966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 28 - 131
Target Start/End: Complemental strand, 3159263 - 3159160
Alignment:
Q  28 gtctccagatctgcaacgttgacgacaccaaagtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaacaccgcactaa 127  Q
    |||||| ||||||||||||||| ||| | ||| |||||||||  || ||||||||||| || | || ||| |||||||| ||| ||||||| ||||||||    
T  3159263 gtctccggatctgcaacgttgatgacgctaaaatcattgatcggatatgcacttgctcaaagctaacctttcaacctgattcaaataaacatcgcactaa 3159164  T
Q  128 gacg 131  Q
    ||||    
T  3159163 gacg 3159160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 65
Target Start/End: Original strand, 7861038 - 7861081
Alignment:
Q  22 actcatgtctccagatctgcaacgttgacgacaccaaagtcatt 65  Q
    |||||||||||||||||||||||||||||||||| |||||||||    
T  7861038 actcatgtctccagatctgcaacgttgacgacactaaagtcatt 7861081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 11210150 - 11210268
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattg------atcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||      |||  |||| ||||   || ||   |||||| |||||||||||| |    
T  11210150 aatactcatgtctccggatctgcaacgttgatgacaccaaagtcattgtcattgatcggatctccactcaatcaaagttaatctttcaacctgaatcaaa 11210249  T
Q  113 taaacaccgcactaagacg 131  Q
    |||||||||||||||||||    
T  11210250 taaacaccgcactaagacg 11210268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 25658451 - 25658333
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtca------ttgatcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    ||||||||||| ||| ||| ||||||||||||||| |||||||||      ||||||  |||||||||||||| || | |||||| |||| | ||||| |    
T  25658451 aatactcatgtatccggatgtgcaacgttgacgacgccaaagtcattgtcgttgatcggatctgcacttgctcaaagctaatctttcaacataaatcaaa 25658352  T
Q  113 taaacaccgcactaagacg 131  Q
    |||||| ||||||||||||    
T  25658351 taaacatcgcactaagacg 25658333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 43278218 - 43278100
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattg------atcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    ||||||| ||||||  ||||||||||||||||||| |||||||| |||      |||  || | ||||||||| ||   ||||||||||||||||||| |    
T  43278218 aatactcgtgtctctggatctgcaacgttgacgacgccaaagtcgttgtcatggatcggatatacacttgctcaaagttaatcttccaacctgaatcaaa 43278119  T
Q  113 taaacaccgcactaagacg 131  Q
    |||||||||||||||||||    
T  43278118 taaacaccgcactaagacg 43278100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 127
Target Start/End: Complemental strand, 51152408 - 51152294
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattg------atcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    ||||||||| ||||| ||||||||||||||||||  ||||||||||||      |||  |||||||||||||| || | ||| || |||||||||||| |    
T  51152408 aatactcatatctccggatctgcaacgttgacgatgccaaagtcattgtcattgatcggatctgcacttgctcaaagctaatttttcaacctgaatcaaa 51152309  T
Q  113 taaacaccgcactaa 127  Q
    ||||||||| |||||    
T  51152308 taaacaccgtactaa 51152294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 1657402 - 1657451
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgat 68  Q
    ||||| ||||||||| ||||||||||||||||||| ||||||||||||||    
T  1657402 aatacccatgtctccggatctgcaacgttgacgactccaaagtcattgat 1657451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 29257503 - 29257454
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgat 68  Q
    ||||| |||||||||  |||||||||||||||||||||||||||||||||    
T  29257503 aatacacatgtctccgtatctgcaacgttgacgacaccaaagtcattgat 29257454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 29474164 - 29474213
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgat 68  Q
    ||||| ||||||||| ||||||||||||||||||| ||||||||||||||    
T  29474164 aatacccatgtctccggatctgcaacgttgacgactccaaagtcattgat 29474213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 129
Target Start/End: Original strand, 45350907 - 45351023
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattg------atcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    ||||||||||||||| |||||| ||| |||||||| ||||||||||||      |||| ||||||||||| || || | |||||| |||| ||| ||| |    
T  45350907 aatactcatgtctccggatctgtaacattgacgacgccaaagtcattgtcattaatcagatctgcacttgatcaaagctaatctttcaacttgagtcaaa 45351006  T
Q  113 taaacaccgcactaaga 129  Q
    |||||||| ||||||||    
T  45351007 taaacaccacactaaga 45351023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 129
Target Start/End: Original strand, 45360386 - 45360502
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattg------atcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    ||||||||||||||| |||||| ||| |||||||| ||||||||||||      |||| ||||||||||| || || | |||||| |||| ||| ||| |    
T  45360386 aatactcatgtctccggatctgtaacattgacgacgccaaagtcattgtcattaatcagatctgcacttgatcaaagctaatctttcaacttgagtcaaa 45360485  T
Q  113 taaacaccgcactaaga 129  Q
    |||||||| ||||||||    
T  45360486 taaacaccacactaaga 45360502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 131
Target Start/End: Complemental strand, 53647910 - 53647798
Alignment:
Q  25 catgtctccagatctgcaacgttgacgacaccaaagtcattg------atcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaaca 118  Q
    ||||||||| ||||||||| |||| |||| ||||||||||||      |||  |||||||||||||| ||   ||| || |||||||||||| |||||||    
T  53647910 catgtctccggatctgcaatgttggcgacgccaaagtcattgtcattgatcggatctgcacttgctcaaagttaatttttcaacctgaatcaaataaaca 53647811  T
Q  119 ccgcactaagacg 131  Q
    |||||||||||||    
T  53647810 ccgcactaagacg 53647798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 29589197 - 29589245
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattga 67  Q
    ||||||||||||||| ||||||||||||||| ||| |||||||||||||    
T  29589197 aatactcatgtctccggatctgcaacgttgaagactccaaagtcattga 29589245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 40198388 - 40198500
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaaca 118  Q
    ||||||||| ||||||||| |||||||||||||||  |||||| |||||||  |  | || ||| || ||   |||||| |||||||||||| |||||||    
T  40198388 aatactcatatctccagatttgcaacgttgacgacctcaaagtgattgatcggacatacatttgttcaaagataatctttcaacctgaatcaaataaaca 40198487  T
Q  119 ccgcactaagacg 131  Q
    || ||||||||||    
T  40198488 ccacactaagacg 40198500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 118
Target Start/End: Complemental strand, 22621693 - 22621610
Alignment:
Q  35 gatctgcaacgttgacgacaccaaagtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaaca 118  Q
    |||||||||||||||||||  ||||||| ||||| | || |||||||| |  |||| |||||| |||||||||||| |||||||    
T  22621693 gatctgcaacgttgacgacgtcaaagtctttgattagatttgcacttgttaaaaactaatctttcaacctgaatcaaataaaca 22621610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 60 - 131
Target Start/End: Original strand, 24568597 - 24568668
Alignment:
Q  60 gtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaacaccgcactaagacg 131  Q
    ||||||||||  |||||||||| ||| || | |||||| |||||||||||| ||||||||| ||||||||||    
T  24568597 gtcattgatcggatctgcactttctcaaagctaatctttcaacctgaatcaaataaacaccccactaagacg 24568668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 27091001 - 27090890
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaaca 118  Q
    |||||||| |||||| |||||||  |||| || ||  |||| |||||||||  |||| ||||||||| ||   |||||| |||||||||| | |||||||    
T  27091001 aatactcaagtctccggatctgcctcgttaacaacgtcaaaatcattgatcggatctacacttgctcaaagttaatctttcaacctgaataagataaaca 27090902  T
Q  119 ccgcactaagac 130  Q
    ||||||||||||    
T  27090901 ccgcactaagac 27090890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 130
Target Start/End: Complemental strand, 28837344 - 28837232
Alignment:
Q  24 tcatgtctccagatctgcaacgttgacgacaccaaagtcattgatcat-------atctgcacttgctccaaacaaatcttccaacctgaatcatataaa 116  Q
    |||| ||||| ||||||||||||||||||||| |||||||||| ||||       |||| ||||||||| || | |||||| |||| ||||| | |||||    
T  28837344 tcatttctccggatctgcaacgttgacgacacgaaagtcattg-tcattgttcggatcttcacttgctcaaagctaatctttcaacgtgaattaaataaa 28837246  T
Q  117 caccgcactaagac 130  Q
    ||||||||||||||    
T  28837245 caccgcactaagac 28837232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 66
Target Start/End: Complemental strand, 30202322 - 30202275
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattg 66  Q
    |||| |||||||||| ||||||||||||||||||| ||||||||||||    
T  30202322 aataatcatgtctccggatctgcaacgttgacgacgccaaagtcattg 30202275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 130
Target Start/End: Complemental strand, 6911960 - 6911847
Alignment:
Q  23 ctcatgtctccagatctgcaacgttgacgacaccaaagtcattg------atcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaa 116  Q
    ||||||||||| ||||| |||| |||||||| ||||||||||||      |||  |||||| |||| || || | |||||| |||||||||||| |||||    
T  6911960 ctcatgtctccggatctacaacattgacgacgccaaagtcattgtcattgatcggatctgctcttgttcaaagctaatctttcaacctgaatcaaataaa 6911861  T
Q  117 caccgcactaagac 130  Q
    ||| ||||||||||    
T  6911860 cactgcactaagac 6911847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 238
Target Start/End: Original strand, 19443272 - 19443310
Alignment:
Q  200 attgtcaattttctaaatattgtgcacatctttttaatt 238  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  19443272 attgtcaattttctaaatattgagcacatctttttaatt 19443310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 238
Target Start/End: Complemental strand, 25494180 - 25494142
Alignment:
Q  200 attgtcaattttctaaatattgtgcacatctttttaatt 238  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  25494180 attgtcaattttctaaatatcgtgcacatctttttaatt 25494142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 238
Target Start/End: Original strand, 34031714 - 34031752
Alignment:
Q  200 attgtcaattttctaaatattgtgcacatctttttaatt 238  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  34031714 attgtcaattttttaaatattgtgcacatctttttaatt 34031752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 254 - 304
Target Start/End: Complemental strand, 49263335 - 49263285
Alignment:
Q  254 tcaaatgagtcttcaactatttctccttcttcacctcttatcagcagttcc 304  Q
    ||||||||||||||||||||| |||| ||||||||||| ||||||| ||||    
T  49263335 tcaaatgagtcttcaactattgctccctcttcacctctcatcagcaattcc 49263285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 238
Target Start/End: Original strand, 54982390 - 54982428
Alignment:
Q  200 attgtcaattttctaaatattgtgcacatctttttaatt 238  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  54982390 attgttaattttctaaatattgtgcacatctttttaatt 54982428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 4959410 - 4959459
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgat 68  Q
    ||||| ||||||||| ||||||||||| ||||||| ||||||||||||||    
T  4959410 aatacccatgtctccggatctgcaacgctgacgacgccaaagtcattgat 4959459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 14346709 - 14346660
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgat 68  Q
    ||||| |||| |||| ||||||||||||||||||| ||||||||||||||    
T  14346709 aatacacatggctccggatctgcaacgttgacgactccaaagtcattgat 14346660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 26576339 - 26576388
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgat 68  Q
    ||||||||||||| | |||||||| |||||||||| ||||||||||||||    
T  26576339 aatactcatgtcttcggatctgcatcgttgacgactccaaagtcattgat 26576388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 35 - 80
Target Start/End: Complemental strand, 38434861 - 38434816
Alignment:
Q  35 gatctgcaacgttgacgacaccaaagtcattgatcatatctgcact 80  Q
    ||||||||||||||||||| ||||||||||||||  ||||||||||    
T  38434861 gatctgcaacgttgacgactccaaagtcattgattttatctgcact 38434816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 41837609 - 41837560
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgat 68  Q
    |||||||||||||| |||||| ||||||||||||| ||||| ||||||||    
T  41837609 aatactcatgtctctagatctacaacgttgacgacgccaaaatcattgat 41837560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 43157055 - 43157006
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgat 68  Q
    ||||||||||| ||| ||||||||||||||| ||| ||||||||||||||    
T  43157055 aatactcatgtgtccggatctgcaacgttgaggactccaaagtcattgat 43157006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 60 - 129
Target Start/End: Original strand, 43493171 - 43493240
Alignment:
Q  60 gtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaacaccgcactaaga 129  Q
    |||||||| || || ||||||||||| || | |||||| |||||||||||| |||||||| |||||||||    
T  43493171 gtcattgaccagatatgcacttgctcaaagctaatctttcaacctgaatcaaataaacacagcactaaga 43493240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 129
Target Start/End: Original strand, 44756879 - 44756995
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattg------atcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    |||||||| ||||||  |||||||||||||| ||| ||||||||| ||      |||  |||||||||||||| |  |  ||||| |||||||||||| |    
T  44756879 aatactcaagtctccgaatctgcaacgttgaagacgccaaagtcactgtcattaatcggatctgcacttgctcaatgctgatctttcaacctgaatcaaa 44756978  T
Q  113 taaacaccgcactaaga 129  Q
    |||||||||||||||||    
T  44756979 taaacaccgcactaaga 44756995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 47704182 - 47704231
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgat 68  Q
    ||||||||| ||||  |||||||||||||||| |||||||||||||||||    
T  47704182 aatactcatatctctggatctgcaacgttgacaacaccaaagtcattgat 47704231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 80
Target Start/End: Original strand, 9526190 - 9526242
Alignment:
Q  28 gtctccagatctgcaacgttgacgacaccaaagtcattgatcatatctgcact 80  Q
    |||| ||||||||||||||||||||| |||| |||||| || |||||||||||    
T  9526190 gtcttcagatctgcaacgttgacgacgccaacgtcatttattatatctgcact 9526242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 131
Target Start/End: Complemental strand, 24789451 - 24789355
Alignment:
Q  35 gatctgcaacgttgacgacaccaaagtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaacaccgcactaagacg 131  Q
    ||||||||||||||||||    |||||||||| |   ||||||| ||| || || | |||||| |||||||||||| |||||||| |||||||||||    
T  24789451 gatctgcaacgttgacgaagtaaaagtcattggttgaatctgcatttgatcaaagctaatctttcaacctgaatcaaataaacactgcactaagacg 24789355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 131
Target Start/End: Original strand, 24818808 - 24818904
Alignment:
Q  35 gatctgcaacgttgacgacaccaaagtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaacaccgcactaagacg 131  Q
    ||||||||||||||||||    |||||||||| |   ||||||| ||| || || | |||||| |||||||||||| |||||||| |||||||||||    
T  24818808 gatctgcaacgttgacgaagtaaaagtcattggttgaatctgcatttgatcaaagctaatctttcaacctgaatcaaataaacactgcactaagacg 24818904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 29266722 - 29266762
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaa 59  Q
    ||||||||||||||| ||||||||||||||||||| |||||    
T  29266722 aatactcatgtctccggatctgcaacgttgacgacgccaaa 29266762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 236
Target Start/End: Original strand, 47944185 - 47944221
Alignment:
Q  200 attgtcaattttctaaatattgtgcacatctttttaa 236  Q
    |||||||||||| ||||||||||||||||||||||||    
T  47944185 attgtcaattttttaaatattgtgcacatctttttaa 47944221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 72 - 131
Target Start/End: Original strand, 7861102 - 7861161
Alignment:
Q  72 atctgcacttgctccaaacaaatcttccaacctgaatcatataaacaccgcactaagacg 131  Q
    |||||||||||||  ||   |||||| |||||||||||| ||||||||||||||||||||    
T  7861102 atctgcacttgcttaaagttaatctttcaacctgaatcaaataaacaccgcactaagacg 7861161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 131
Target Start/End: Original strand, 29268693 - 29268732
Alignment:
Q  92 aatcttccaacctgaatcatataaacaccgcactaagacg 131  Q
    |||||| |||||||||||| ||||||||||||||||||||    
T  29268693 aatctttcaacctgaatcaaataaacaccgcactaagacg 29268732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 25 - 68
Target Start/End: Complemental strand, 41486847 - 41486804
Alignment:
Q  25 catgtctccagatctgcaacgttgacgacaccaaagtcattgat 68  Q
    |||||||||||||||||||||| || ||| ||||||||||||||    
T  41486847 catgtctccagatctgcaacgtggatgacgccaaagtcattgat 41486804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 238
Target Start/End: Original strand, 1821295 - 1821333
Alignment:
Q  200 attgtcaattttctaaatattgtgcacatctttttaatt 238  Q
    |||||||||||| ||||||||||||||||| ||||||||    
T  1821295 attgtcaattttataaatattgtgcacatcattttaatt 1821333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 238
Target Start/End: Complemental strand, 2493553 - 2493515
Alignment:
Q  200 attgtcaattttctaaatattgtgcacatctttttaatt 238  Q
    |||||||||||| |||||||| |||||||||||||||||    
T  2493553 attgtcaattttttaaatattatgcacatctttttaatt 2493515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 131
Target Start/End: Complemental strand, 18995548 - 18995455
Alignment:
Q  35 gatctgcaacgttgacgacaccaaagtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaacaccgcactaagacg 131  Q
    ||||||||||||||||||| | ||||||||||||   ||||| ||||| || |||| |||||| ||||   ||||| || |||||||||| ||||||    
T  18995548 gatctgcaacgttgacgacgcaaaagtcattgattgaatctgtacttgatcaaaactaatctttcaac---aatcaaatgaacaccgcacaaagacg 18995455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 22121702 - 22121612
Alignment:
Q  41 caacgttgacgacaccaaagtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaacaccgcactaagacg 131  Q
    |||||||||| || | |||||||||||| | || ||||||||||| || | ||| || |||| ||||||| ||||||||| || |||||||    
T  22121702 caacgttgacaacgcaaaagtcattgattaaatatgcacttgctcaaagctaatatttcaacttgaatcaaataaacaccacattaagacg 22121612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 125
Target Start/End: Complemental strand, 31932540 - 31932434
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaaca 118  Q
    ||||||||||| ||| | |||| |||||||| ||||| ||| ||||||||   |||| |||||| || |||| ||||||   || ||||||| |||||||    
T  31932540 aatactcatgtttccggttctgtaacgttgatgacacaaaattcattgattgaatctacacttgatcaaaactaatctttttacatgaatcaaataaaca 31932441  T
Q  119 ccgcact 125  Q
    |||||||    
T  31932440 ccgcact 31932434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 238
Target Start/End: Original strand, 49299558 - 49299596
Alignment:
Q  200 attgtcaattttctaaatattgtgcacatctttttaatt 238  Q
    ||||| ||||||||||||| |||||||||||||||||||    
T  49299558 attgttaattttctaaataatgtgcacatctttttaatt 49299596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 299
Target Start/End: Original strand, 9089360 - 9089405
Alignment:
Q  254 tcaaatgagtcttcaactatttctccttcttcacctcttatcagca 299  Q
    ||||||||||||||||||||| || | ||||||||||| |||||||    
T  9089360 tcaaatgagtcttcaactattgcttcctcttcacctctcatcagca 9089405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 24073769 - 24073802
Alignment:
Q  200 attgtcaattttctaaatattgtgcacatctttt 233  Q
    ||||||||||||||||||||| ||||||||||||    
T  24073769 attgtcaattttctaaatattttgcacatctttt 24073802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 291
Target Start/End: Original strand, 38044578 - 38044615
Alignment:
Q  254 tcaaatgagtcttcaactatttctccttcttcacctct 291  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  38044578 tcaaatgagtcttcaactattgctccatcttcacctct 38044615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 299
Target Start/End: Original strand, 54982498 - 54982543
Alignment:
Q  254 tcaaatgagtcttcaactatttctccttcttcacctcttatcagca 299  Q
    ||||||||||||||| ||||| |||| ||||||||||| |||||||    
T  54982498 tcaaatgagtcttcagctattgctccctcttcacctctcatcagca 54982543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 68
Target Start/End: Complemental strand, 32189248 - 32189208
Alignment:
Q  28 gtctccagatctgcaacgttgacgacaccaaagtcattgat 68  Q
    ||||||||||||||||||| || ||| ||||||||||||||    
T  32189248 gtctccagatctgcaacgtggatgacgccaaagtcattgat 32189208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 63; Significance: 2e-27; HSPs: 52)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 129
Target Start/End: Original strand, 32778808 - 32778918
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaaca 118  Q
    ||||||||||||||||||||||||| ||||||||| | |||||||||||||  |||||||||||||| ||   |||||| |||||||||||| |||||||    
T  32778808 aatactcatgtctccagatctgcaaagttgacgacgcaaaagtcattgatcggatctgcacttgctcaaagttaatctttcaacctgaatcaaataaaca 32778907  T
Q  119 ccgcactaaga 129  Q
    ||||| |||||    
T  32778908 ccgcattaaga 32778918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 10334454 - 10334342
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaaca 118  Q
    ||||||||||||||| ||||||||||||||||||  |||||||||||||||  ||||||| |||||| || | ||| || ||| |||||||| |||||||    
T  10334454 aatactcatgtctccggatctgcaacgttgacgatgccaaagtcattgatcggatctgcatttgctcaaagctaatatttcaatctgaatcaaataaaca 10334355  T
Q  119 ccgcactaagacg 131  Q
    |||||||||||||    
T  10334354 ccgcactaagacg 10334342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 37128333 - 37128450
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattg------atcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    ||||||||||||||| ||||||||| ||||||||| ||||||||||||      |||  |||||||||||||| |||| |||||| |||||||||||| |    
T  37128333 aatactcatgtctccggatctgcaa-gttgacgacgccaaagtcattgttattgatcggatctgcacttgctcaaaactaatctttcaacctgaatcaaa 37128431  T
Q  113 taaacaccgcactaagacg 131  Q
    |||||||||||||||||||    
T  37128432 taaacaccgcactaagacg 37128450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 2968810 - 2968698
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaaca 118  Q
    ||||| ||||||||||||| ||||| | ||| |||||||||||||||||||  || ||||||||||| || |  ||||| |||||||||||| ||||| |    
T  2968810 aatacgcatgtctccagatatgcaatgctgatgacaccaaagtcattgatcggatttgcacttgctcaaagcggatctttcaacctgaatcaaataaata 2968711  T
Q  119 ccgcactaagacg 131  Q
    |||||||||||||    
T  2968710 ccgcactaagacg 2968698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 7579700 - 7579818
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattg------atcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    ||||||||||||||  |||||||||||||| |||| ||||||||||||      |||  |||||||||||||| || | |||||| |||||||||||| |    
T  7579700 aatactcatgtctctggatctgcaacgttggcgacgccaaagtcattgtcattaatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaa 7579799  T
Q  113 taaacaccgcactaagacg 131  Q
    |||||||||||||||||||    
T  7579800 taaacaccgcactaagacg 7579818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 10338667 - 10338785
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtc------attgatcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||      |||||||  |||||||||||||| || | ||| || |||| ||||||| |    
T  10338667 aatactcatgtctccggatctgcaacgttgacgacgccaaagtcattgttattgatcggatctgcacttgctcaaagctaatttttcaacttgaatcaaa 10338766  T
Q  113 taaacaccgcactaagacg 131  Q
    |||||||||||||||||||    
T  10338767 taaacaccgcactaagacg 10338785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 2234315 - 2234433
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattg------atcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    |||||||||| |||| |||||||||||||||||||| |||| ||||||      |||  |||||||||||||| || | ||| || |||||||||||| |    
T  2234315 aatactcatgcctccggatctgcaacgttgacgacatcaaattcattgttattgatcggatctgcacttgctcaaagctaatatttcaacctgaatcaaa 2234414  T
Q  113 taaacaccgcactaagacg 131  Q
    |||||||||||||||||||    
T  2234415 taaacaccgcactaagacg 2234433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 14600543 - 14600661
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattg------atcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    |||||| |||||||  |||||||||||||||||||  |||||||||||      |||  |||||||||||||| || | |||||| |||||||||||| |    
T  14600543 aatacttatgtctctggatctgcaacgttgacgacgtcaaagtcattgtcattgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaa 14600642  T
Q  113 taaacaccgcactaagacg 131  Q
    |||||||||||||||||||    
T  14600643 taaacaccgcactaagacg 14600661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 127
Target Start/End: Complemental strand, 41362012 - 41361902
Alignment:
Q  23 ctcatgtctccagatctgcaacgttgacgacaccaaagtcattga------tcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaa 116  Q
    ||||||||||  ||||||| |||||||||||||||||||||||||      ||  |||||||||||||| || | |||||| |||||||||||| |||||    
T  41362012 ctcatgtctctggatctgcgacgttgacgacaccaaagtcattgacattgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaa 41361913  T
Q  117 caccgcactaa 127  Q
    |||||||||||    
T  41361912 caccgcactaa 41361902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 28 - 131
Target Start/End: Complemental strand, 4757440 - 4757331
Alignment:
Q  28 gtctccagatctgcaacgttgacgacaccaaagtcattg------atcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaacaccg 121  Q
    |||||| ||||||||||||||||||| ||||||||||||      |||  |||||||||||||| || | |||||| |||||||||||| ||||||| ||    
T  4757440 gtctccggatctgcaacgttgacgacgccaaagtcattgtcattgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacatcg 4757341  T
Q  122 cactaagacg 131  Q
    ||||||||||    
T  4757340 cactaagacg 4757331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 31407593 - 31407710
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattg------atcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    |||||||||| |||| ||||||||| ||||||||  ||||||||||||      |||  |||||||||||||| || | |||||| |||||||||||| |    
T  31407593 aatactcatgactccggatctgcaatgttgacgaagccaaagtcattgtcattgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaa 31407692  T
Q  113 taaacaccgcactaagac 130  Q
    ||||||||||||||||||    
T  31407693 taaacaccgcactaagac 31407710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 129
Target Start/End: Complemental strand, 10148229 - 10148113
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaa------gtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    ||||||||||||||| ||||||||||||||||||| | |||      ||||||||||  |||||||||||||| || | ||| || |||||||||||| |    
T  10148229 aatactcatgtctccggatctgcaacgttgacgacgctaaagtcattgtcattgatcggatctgcacttgctcaaagctaatttttcaacctgaatcaaa 10148130  T
Q  113 taaacaccgcactaaga 129  Q
    ||||||||| |||||||    
T  10148129 taaacaccgtactaaga 10148113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 125
Target Start/End: Complemental strand, 11162167 - 11162055
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattg------atcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    ||||||||| | ||| ||||||||||||||||||| ||||||||||||      |||| || ||||||||||| || | |||||| |||||||||||| |    
T  11162167 aatactcatatttccggatctgcaacgttgacgacgccaaagtcattgtcattgatcagatatgcacttgctcaaagctaatctttcaacctgaatcaaa 11162068  T
Q  113 taaacaccgcact 125  Q
    |||||||||||||    
T  11162067 taaacaccgcact 11162055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 181
Target Start/End: Original strand, 24791013 - 24791181
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaa------gtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    ||||||||||||||  ||||||||||||||||||| |||||      ||||||||||  || ||||||||||| |||| |||||| |||||||| ||| |    
T  24791013 aatactcatgtctctggatctgcaacgttgacgacgccaaagtcattgtcattgatcggatttgcacttgctcaaaactaatctttcaacctgattcaaa 24791112  T
Q  113 taaacaccgcactaagacgnnnnnnnnnnnncacaccacacaacgacgagaaatcaaaacaaatagagt 181  Q
    ||||||||  |||||||||            |||||| ||||| ||||||||||||||||||| |||||    
T  24791113 taaacaccaaactaagacgggaaattaaaaacacaccgcacaaagacgagaaatcaaaacaaacagagt 24791181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 13576045 - 13576157
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaaca 118  Q
    ||||||||| ||||| |||||||||| |||| ||  |||||||| ||||||  |||||||||||||| ||   |||||| ||| |||||||  |||||||    
T  13576045 aatactcatttctccggatctgcaacattgaagatgccaaagtcgttgatcggatctgcacttgctcaaagttaatctttcaatctgaatctaataaaca 13576144  T
Q  119 ccgcactaagacg 131  Q
    |||||||||||||    
T  13576145 ccgcactaagacg 13576157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 2025069 - 2025187
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaa------gtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    |||| |||||||||| ||||||||||||||||||  ||| |      ||||||||||  |||||||||||||| || | |||||| ||| |||||||| |    
T  2025069 aataatcatgtctccggatctgcaacgttgacgatgccagaatcattgtcattgatcggatctgcacttgctcaaagctaatctttcaatctgaatcaaa 2025168  T
Q  113 taaacaccgcactaagacg 131  Q
    |||||||||||||||||||    
T  2025169 taaacaccgcactaagacg 2025187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 19 - 82
Target Start/End: Original strand, 3925526 - 3925589
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgatcatatctgcacttg 82  Q
    |||||||||||||||| |||||||||||||||||| ||||||||||||||   |||||||||||    
T  3925526 aatactcatgtctccaaatctgcaacgttgacgactccaaagtcattgatttgatctgcacttg 3925589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 12329911 - 12329793
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtc------attgatcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    ||||| ||||||||| ||||||||||||||||||| ||||||||      |||||||  |||||||||||||| || | ||| || |||||| ||||| |    
T  12329911 aatacccatgtctccggatctgcaacgttgacgacgccaaagtcattgtcattgatcggatctgcacttgctcaaagctaatttttcaacctaaatcaaa 12329812  T
Q  113 taaacaccgcactaagacg 131  Q
    ||||||||||| |||||||    
T  12329811 taaacaccgcattaagacg 12329793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 30026727 - 30026845
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtca------ttgatcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    |||| |||||||||| ||||||||||||||| ||  |||||||||      ||||||| | |||||||||||| || | |||||| |||| ||||||| |    
T  30026727 aatattcatgtctccggatctgcaacgttgaagatgccaaagtcattgtcattgatcagacctgcacttgctcaaagctaatctttcaacatgaatcaaa 30026826  T
Q  113 taaacaccgcactaagacg 131  Q
    |||||||||||||||||||    
T  30026827 taaacaccgcactaagacg 30026845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 24 - 131
Target Start/End: Complemental strand, 9501865 - 9501752
Alignment:
Q  24 tcatgtctccagatctgcaacgttgacgacaccaaagtc------attgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaac 117  Q
    |||||||||| ||| |||||||||||||| |||||||||      |||||||  || ||||||||||| || | |||||| |||||||||||| ||||||    
T  9501865 tcatgtctccggatttgcaacgttgacgaaaccaaagtcgttgtcattgatcggatttgcacttgctcaaagctaatctttcaacctgaatcaaataaac 9501766  T
Q  118 accgcactaagacg 131  Q
    ||||||| ||||||    
T  9501765 accgcacaaagacg 9501752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 24 - 130
Target Start/End: Original strand, 13570589 - 13570701
Alignment:
Q  24 tcatgtctccagatctgcaacgttgacgacaccaaagtcattg------atcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaac 117  Q
    |||| ||||| ||||||||||||||||||  ||||||||||||      |||| |||||||||||||| || | |||||| |||| ||||||| ||||||    
T  13570589 tcatatctccggatctgcaacgttgacgatgccaaagtcattgtaattgatcagatctgcacttgctcaaagctaatctttcaacttgaatcaaataaac 13570688  T
Q  118 accgcactaagac 130  Q
    ||| |||||||||    
T  13570689 accacactaagac 13570701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 123
Target Start/End: Original strand, 6219947 - 6220051
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaaca 118  Q
    ||||||||||| | | ||||||||||||||| ||| ||||| ||||||||   |||||||||||||| | || |||||| |||||||||| | |||||||    
T  6219947 aatactcatgttttcggatctgcaacgttgaagacgccaaaatcattgattgaatctgcacttgctcaagactaatctttcaacctgaatgaaataaaca 6220046  T
Q  119 ccgca 123  Q
     ||||    
T  6220047 tcgca 6220051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 1810067 - 1810185
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaa------gtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    ||||||||||||||| |||||||||||||| ||||  ||||      ||||||||||  || | ||||||||| |||| |||||| |||||||||||| |    
T  1810067 aatactcatgtctccggatctgcaacgttggcgacgtcaaagtcattgtcattgatcggatttacacttgctcaaaactaatctttcaacctgaatcaaa 1810166  T
Q  113 taaacaccgcactaagacg 131  Q
    |||||| ||| ||||||||    
T  1810167 taaacatcgcgctaagacg 1810185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 60 - 131
Target Start/End: Original strand, 43937069 - 43937140
Alignment:
Q  60 gtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaacaccgcactaagacg 131  Q
    ||||||||||  |||||||||||||| ||   |||||| |||||||||||| ||||||||||||||||||||    
T  43937069 gtcattgatcggatctgcacttgctcaaagttaatctttcaacctgaatcaaataaacaccgcactaagacg 43937140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 200 - 238
Target Start/End: Complemental strand, 5871222 - 5871184
Alignment:
Q  200 attgtcaattttctaaatattgtgcacatctttttaatt 238  Q
    |||||||||||||||||||||||||||||||||||||||    
T  5871222 attgtcaattttctaaatattgtgcacatctttttaatt 5871184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 37 - 131
Target Start/End: Original strand, 10633050 - 10633144
Alignment:
Q  37 tctgcaacgttgacgacaccaaagtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaacaccgcactaagacg 131  Q
    ||||||||||||||||| | ||| ||||||||   |||| |||||| || || | |||||| |||||||||| | ||||||||||||||||||||    
T  10633050 tctgcaacgttgacgacgcaaaaatcattgattgaatctacacttgatcaaagctaatctttcaacctgaataaaataaacaccgcactaagacg 10633144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 24210525 - 24210408
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtc------attgatcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    ||||||||||||||  ||||||||||||||||||| ||||||||      | |||||  |||| |||||| || || | |||||| |||||||||||| |    
T  24210525 aatactcatgtctctggatctgcaacgttgacgacgccaaagtctttgtgaatgatcggatctacacttgttcaaagctaatctttcaacctgaatcaaa 24210426  T
Q  113 taaacaccgcactaagac 130  Q
    |||| |||||||||||||    
T  24210425 taaataccgcactaagac 24210408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 200 - 238
Target Start/End: Complemental strand, 32234077 - 32234039
Alignment:
Q  200 attgtcaattttctaaatattgtgcacatctttttaatt 238  Q
    |||||||||||||||||||||||||||||||||||||||    
T  32234077 attgtcaattttctaaatattgtgcacatctttttaatt 32234039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 24 - 131
Target Start/End: Complemental strand, 37612932 - 37612819
Alignment:
Q  24 tcatgtctccagatctgcaacgttgacgacaccaaagtcattg------atcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaac 117  Q
    |||||| ||| ||||||||||||||| ||| ||||||||||||      |||  ||||||| |||||| || | |||||| |||| ||||||| ||||||    
T  37612932 tcatgtatccggatctgcaacgttgaagacgccaaagtcattgtcattgatcggatctgcaattgctcaaagctaatctttcaacttgaatcaaataaac 37612833  T
Q  118 accgcactaagacg 131  Q
    ||||||||||||||    
T  37612832 accgcactaagacg 37612819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 24 - 131
Target Start/End: Original strand, 39067539 - 39067652
Alignment:
Q  24 tcatgtctccagatctgcaacgttgacgacaccaaagtcattg------atcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaac 117  Q
    |||||||||  |||||||||||||| |||| ||||||||||||      |||  |||||||||||||| || | |||||| |||| ||||||  ||||||    
T  39067539 tcatgtctctggatctgcaacgttggcgacgccaaagtcattgtcatcgatcggatctgcacttgctcaaagctaatctttcaacatgaatctaataaac 39067638  T
Q  118 accgcactaagacg 131  Q
    ||||||||||||||    
T  39067639 accgcactaagacg 39067652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 16937175 - 16937224
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgat 68  Q
    ||||| |||||||| |||||||||||||||||||| ||||||||||||||    
T  16937175 aatacccatgtctctagatctgcaacgttgacgactccaaagtcattgat 16937224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 22787774 - 22787658
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgatcata-----tctgcacttgctccaaacaaatcttccaacctgaatcatat 113  Q
    ||||| ||||||||| ||||||||| ||||||||| |||||||||||  ||||      |||||| || ||| || | |||||| |||||||||||| ||    
T  22787774 aatacccatgtctccggatctgcaatgttgacgacgccaaagtcattc-tcattgatcgtctgcatttactcaaagctaatctttcaacctgaatcaaat 22787676  T
Q  114 aaacaccgcactaagacg 131  Q
    ||||||||||||||||||    
T  22787675 aaacaccgcactaagacg 22787658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 254 - 303
Target Start/End: Complemental strand, 34146548 - 34146499
Alignment:
Q  254 tcaaatgagtcttcaactatttctccttcttcacctcttatcagcagttc 303  Q
    ||||||||||||||||||||||||||  |||||||||| |||||||||||    
T  34146548 tcaaatgagtcttcaactatttctcccccttcacctctcatcagcagttc 34146499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 61 - 129
Target Start/End: Original strand, 28297000 - 28297068
Alignment:
Q  61 tcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaacaccgcactaaga 129  Q
    |||||||||  ||||||| |||||| || | |||||| |||||||||||| ||||||||||||||||||    
T  28297000 tcattgatcggatctgcagttgctcaaatctaatctttcaacctgaatcaaataaacaccgcactaaga 28297068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 3204630 - 3204748
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattg------atcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    ||||||||||||| | |||||||||||||||| || ||||||||||||      |||  || ||||||||||| ||   |||||| |||| ||||||| |    
T  3204630 aatactcatgtcttcggatctgcaacgttgaccacgccaaagtcattgtgatttatcggatatgcacttgctcaaagttaatctttcaacttgaatcaaa 3204729  T
Q  113 taaacaccgcactaagacg 131  Q
    ||||||| |||||||||||    
T  3204730 taaacactgcactaagacg 3204748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 19720293 - 19720175
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtc------attgatcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    ||||||||||||| | |||||||||||||||||||  |||||||      |||||||  | |||||||||||| || | |||||| |||||||||||| |    
T  19720293 aatactcatgtcttcggatctgcaacgttgacgacgtcaaagtcattgttattgatcggacctgcacttgctcaaagctaatctttcaacctgaatcaaa 19720194  T
Q  113 taaacaccgcactaagacg 131  Q
    |||  |||||| |||||||    
T  19720193 taattaccgcattaagacg 19720175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 127
Target Start/End: Complemental strand, 31308432 - 31308318
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaa------gtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    |||| |||| ||||| |||||||||||||||||||||||||      ||||||||||  ||||||||||| || |||| | |||| |||||||||| | |    
T  31308432 aatattcatatctccggatctgcaacgttgacgacaccaaagtcgttgtcattgatcggatctgcacttgttcaaaactattctttcaacctgaattaaa 31308333  T
Q  113 taaacaccgcactaa 127  Q
    |||||| || |||||    
T  31308332 taaacatcgtactaa 31308318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 238
Target Start/End: Complemental strand, 11087546 - 11087508
Alignment:
Q  200 attgtcaattttctaaatattgtgcacatctttttaatt 238  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  11087546 attgtcaattttttaaatattgtgcacatctttttaatt 11087508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 127
Target Start/End: Complemental strand, 24700108 - 24700002
Alignment:
Q  27 tgtctccagatctgcaacgttgacgac-ac-----caaagtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaacacc 120  Q
    ||||||| ||||||||||||||||||| ||     ||| ||||||||||  ||||||| |||||| ||   |||||| |||||||||||| |||||||||    
T  24700108 tgtctccggatctgcaacgttgacgacgacaatgtcaatgtcattgatcggatctgcatttgctcaaagttaatctttcaacctgaatcaaataaacacc 24700009  T
Q  121 gcactaa 127  Q
    |||||||    
T  24700008 gcactaa 24700002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 130
Target Start/End: Complemental strand, 31202695 - 31202625
Alignment:
Q  60 gtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaacaccgcactaagac 130  Q
    ||||||||||| ||||||||||| || ||   |||||| |||||||||||| |||||||| ||||||||||    
T  31202695 gtcattgatcagatctgcacttgatcaaagttaatctttcaacctgaatcaaataaacactgcactaagac 31202625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 238
Target Start/End: Complemental strand, 38401928 - 38401890
Alignment:
Q  200 attgtcaattttctaaatattgtgcacatctttttaatt 238  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  38401928 attgtcaactttctaaatattgtgcacatctttttaatt 38401890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 10043050 - 10043001
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgat 68  Q
    ||||| ||||||||| ||||||||||||||||||| ||||||| ||||||    
T  10043050 aatacacatgtctccggatctgcaacgttgacgactccaaagttattgat 10043001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 15665817 - 15665768
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgat 68  Q
    ||||| ||||||||| ||||||||||| ||| ||||||||||||||||||    
T  15665817 aatacccatgtctccggatctgcaacgctgatgacaccaaagtcattgat 15665768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 16938113 - 16938162
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgat 68  Q
    ||||| ||| ||||| ||||||||||||||||||||| ||||||||||||    
T  16938113 aatacccatatctccggatctgcaacgttgacgacacaaaagtcattgat 16938162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 23767017 - 23766969
Alignment:
Q  20 atactcatgtctccagatctgcaacgttgacgacaccaaagtcattgat 68  Q
    |||| ||||| ||| ||||||||||||||||||| ||||||||||||||    
T  23767017 atacccatgtttccggatctgcaacgttgacgactccaaagtcattgat 23766969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 238
Target Start/End: Original strand, 16599085 - 16599119
Alignment:
Q  204 tcaattttctaaatattgtgcacatctttttaatt 238  Q
    ||||||||||||||||||||||||||| |||||||    
T  16599085 tcaattttctaaatattgtgcacatctctttaatt 16599119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 68
Target Start/End: Complemental strand, 32920911 - 32920873
Alignment:
Q  30 ctccagatctgcaacgttgacgacaccaaagtcattgat 68  Q
    |||||||||||||||||||| ||| ||||||||||||||    
T  32920911 ctccagatctgcaacgttgatgacgccaaagtcattgat 32920873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 181
Target Start/End: Original strand, 1039818 - 1039907
Alignment:
Q  92 aatcttccaacctgaatcatataaacaccgcactaagacgnnnnnnnnnnnncacaccacacaacgacgagaaatcaaaacaaatagagt 181  Q
    |||||| ||||||| |||| ||||||||||||||||||||             ||||| ||||| |||||||||||||||||||||||||    
T  1039818 aatctttcaacctggatcaaataaacaccgcactaagacgggaaataaaaaatacaccgcacaaagacgagaaatcaaaacaaatagagt 1039907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 68
Target Start/End: Original strand, 32256565 - 32256606
Alignment:
Q  27 tgtctccagatctgcaacgttgacgacaccaaagtcattgat 68  Q
    ||||||| ||||||||||||||| ||| ||||||||||||||    
T  32256565 tgtctccggatctgcaacgttgatgactccaaagtcattgat 32256606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 68
Target Start/End: Complemental strand, 5989899 - 5989859
Alignment:
Q  28 gtctccagatctgcaacgttgacgacaccaaagtcattgat 68  Q
    |||||| ||| ||||||||||||||||| ||||||||||||    
T  5989899 gtctccggatttgcaacgttgacgacacaaaagtcattgat 5989859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 18196989 - 18197029
Alignment:
Q  26 atgtctccagatctgcaacgttgacgacaccaaagtcattg 66  Q
    |||||||| |||||||||||||||||||  |||||||||||    
T  18196989 atgtctccggatctgcaacgttgacgacgtcaaagtcattg 18197029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 38545999 - 38546039
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaa 59  Q
    |||||| |||||||| ||||||||||||||||||| |||||    
T  38545999 aatacttatgtctccggatctgcaacgttgacgacgccaaa 38546039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 61; Significance: 4e-26; HSPs: 63)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 105886 - 105998
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaaca 118  Q
    |||||||||||||||  |||||||||||||||||||| |||||||||||||  || ||||||||||| || | |||||| |||||||||||| |||||||    
T  105886 aatactcatgtctccgaatctgcaacgttgacgacacaaaagtcattgatcggatttgcacttgctcaaagctaatctttcaacctgaatcaaataaaca 105985  T
Q  119 ccgcactaagacg 131  Q
    |  ||||||||||    
T  105986 cgacactaagacg 105998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 14585746 - 14585628
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattg------atcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||||      |||  |||||||||||||| || |  ||||| |||||||||||| |    
T  14585746 aatactcatgtctccagatctgcaatgttgacgacgccaaagtcattgtcattgatcggatctgcacttgctcaaagctgatctttcaacctgaatcaaa 14585647  T
Q  113 taaacaccgcactaagacg 131  Q
    |||||||||||||||||||    
T  14585646 taaacaccgcactaagacg 14585628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 35174992 - 35174874
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattg------atcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    |||||||||||||||| |||||||||||||| ||| ||||||||||||      |||| || ||||||||||| || | |||||| |||||||||||| |    
T  35174992 aatactcatgtctccatatctgcaacgttgatgacgccaaagtcattgtcattgatcaaatatgcacttgctcaaagctaatctttcaacctgaatcaaa 35174893  T
Q  113 taaacaccgcactaagacg 131  Q
    |||||||||||||||||||    
T  35174892 taaacaccgcactaagacg 35174874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 49627940 - 49628058
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaa------gtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    ||||||||||||||| ||||||||||||||||||| |||||      ||||||||||  |||||||||||||  || | |||||| |||||||||||| |    
T  49627940 aatactcatgtctccggatctgcaacgttgacgacgccaaagtcattgtcattgatcggatctgcacttgctaaaagctaatctttcaacctgaatcaaa 49628039  T
Q  113 taaacaccgcactaagacg 131  Q
    |||||||||||||||||||    
T  49628040 taaacaccgcactaagacg 49628058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 36624540 - 36624658
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaag------tcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    ||||||||||||||| ||||||||||||||||||  ||||||      |||||||||  |||||||||||||  || | |||||| |||||||||||| |    
T  36624540 aatactcatgtctccggatctgcaacgttgacgatgccaaagccattgtcattgatcggatctgcacttgcttaaagctaatctttcaacctgaatcaaa 36624639  T
Q  113 taaacaccgcactaagacg 131  Q
    |||||||||||||||||||    
T  36624640 taaacaccgcactaagacg 36624658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 19 - 129
Target Start/End: Original strand, 40013117 - 40013233
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgatcat-------atctgcacttgctccaaacaaatcttccaacctgaatcat 111  Q
    ||||||||||||||| |||||||||||||||||||  ||||||||||| ||||       |||||||||||||| || | |||||| ||||||||||||     
T  40013117 aatactcatgtctccggatctgcaacgttgacgacgtcaaagtcattg-tcattgattgaatctgcacttgctcaaagctaatctttcaacctgaatcaa 40013215  T
Q  112 ataaacaccgcactaaga 129  Q
    ||||||||||||||||||    
T  40013216 ataaacaccgcactaaga 40013233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 40883711 - 40883829
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattg------atcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    ||||||||||||| | |||||||||||| |||||| ||||||||||||      |||  |||||||||||||| |||| |||||| |||||||||||| |    
T  40883711 aatactcatgtcttcggatctgcaacgtcgacgacgccaaagtcattgtcattgatcggatctgcacttgctcaaaactaatctttcaacctgaatcaaa 40883810  T
Q  113 taaacaccgcactaagacg 131  Q
     ||||||||||||||||||    
T  40883811 gaaacaccgcactaagacg 40883829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 24 - 131
Target Start/End: Original strand, 54706565 - 54706678
Alignment:
Q  24 tcatgtctccagatctgcaacgttgacgacaccaaag------tcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaac 117  Q
    |||||||||| ||||||||||||||||||| ||||||      |||||||||  |||||||||||||| ||   |||||| |||||||||||| ||||||    
T  54706565 tcatgtctccggatctgcaacgttgacgacgccaaagccattgtcattgatcggatctgcacttgctcaaaggtaatctttcaacctgaatcaaataaac 54706664  T
Q  118 accgcactaagacg 131  Q
    ||||||||||||||    
T  54706665 accgcactaagacg 54706678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 35 - 131
Target Start/End: Original strand, 47733744 - 47733840
Alignment:
Q  35 gatctgcaacgttgacgacaccaaagtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaacaccgcactaagacg 131  Q
    |||||||||| |||||||| ||||||||||||||   || |||| |||||| |||| ||| || |||||||||||| ||||||||||||||||||||    
T  47733744 gatctgcaactttgacgacgccaaagtcattgattgaatatgcatttgctcaaaactaatatttcaacctgaatcaaataaacaccgcactaagacg 47733840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 53155275 - 53155393
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaa------gtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    ||||||||||||||| ||||||||| ||||||||| |||||      ||||||||||  || ||||||||||| || | |||||| |||||||||||| |    
T  53155275 aatactcatgtctccggatctgcaaagttgacgacgccaaagtcattgtcattgatcggatttgcacttgctcaaagctaatctttcaacctgaatcaaa 53155374  T
Q  113 taaacaccgcactaagacg 131  Q
    ||||||| |||||||||||    
T  53155375 taaacactgcactaagacg 53155393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 53402905 - 53402787
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattg------atcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    ||||||||||||||  ||||||||||||||||||| ||||||||||||      |||  || ||||||||||| || | |||||| |||||||||||| |    
T  53402905 aatactcatgtctctggatctgcaacgttgacgacgccaaagtcattgtcattgatcggatttgcacttgctcaaagctaatctttcaacctgaatcaaa 53402806  T
Q  113 taaacaccgcactaagacg 131  Q
    |||||| ||||||||||||    
T  53402805 taaacagcgcactaagacg 53402787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 24 - 131
Target Start/End: Complemental strand, 31270605 - 31270492
Alignment:
Q  24 tcatgtctccagatctgcaacgttgacgacaccaaagtcattg------atcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaac 117  Q
    |||||||||| ||||||||||||||||||| ||||||||||||      |||  |||| ||||||||| || | |||||| |||||||||||  ||||||    
T  31270605 tcatgtctccggatctgcaacgttgacgacgccaaagtcattgtcattgatcggatctacacttgctcaaagctaatctttcaacctgaatcgaataaac 31270506  T
Q  118 accgcactaagacg 131  Q
    ||||||||||||||    
T  31270505 accgcactaagacg 31270492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 22485249 - 22485131
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgatcat-------atctgcacttgctccaaacaaatcttccaacctgaatcat 111  Q
    |||||| |||||| | ||||||||||||||| ||| |||||||||||| ||||       |||||||||||||| || | |||||| ||||||||||||     
T  22485249 aatacttatgtcttcggatctgcaacgttgaggacgccaaagtcattg-tcattgaccggatctgcacttgctcaaagctaatctttcaacctgaatcaa 22485151  T
Q  112 ataaacaccgcactaagacg 131  Q
    ||||||||||||||||||||    
T  22485150 ataaacaccgcactaagacg 22485131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 13701847 - 13701964
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtca------ttgatcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    |||||||||||||||| ||||||||| || |||||||||||||||      ||||||| || ||||||||||| || | |||||| |||| ||||||| |    
T  13701847 aatactcatgtctccaaatctgcaac-ttaacgacaccaaagtcattgtcattgatcagatttgcacttgctcaaagctaatctttcaacttgaatcaaa 13701945  T
Q  113 taaacaccgcactaagacg 131  Q
    |||||||||||||| ||||    
T  13701946 taaacaccgcactaggacg 13701964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 27189249 - 27189367
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtca------ttgatcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    |||||| ||||||| ||||||| |||||||||||| |||||||||      ||||||| |||| ||||||||| || | |||||| |||||||||| | |    
T  27189249 aatacttatgtctctagatctgtaacgttgacgacgccaaagtcaatgtcattgatcagatctacacttgctcaaagctaatctttcaacctgaataaaa 27189348  T
Q  113 taaacaccgcactaagacg 131  Q
    |||||||||||| ||||||    
T  27189349 taaacaccgcaccaagacg 27189367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 19 - 66
Target Start/End: Original strand, 36691644 - 36691691
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattg 66  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  36691644 aatactcatgtctccagatctgcaacgttgacgacgccaaagtcattg 36691691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 26 - 130
Target Start/End: Complemental strand, 48401139 - 48401029
Alignment:
Q  26 atgtctccagatctgcaacgttgacgacaccaaagtcattg------atcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaacac 119  Q
    |||||||| ||||||||||||||||||| ||||||||||||      |||  |||||||||||||| || | ||||||  ||||||||||| ||||||||    
T  48401139 atgtctccggatctgcaacgttgacgacgccaaagtcattgtcattgatcggatctgcacttgctcaaagctaatcttttaacctgaatcaaataaacac 48401040  T
Q  120 cgcactaagac 130  Q
    ||||| |||||    
T  48401039 cgcacaaagac 48401029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 55455155 - 55455031
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtc------------attgatcatatctgcacttgctccaaacaaatcttccaacctga 106  Q
    ||||||||||||||| ||||||||||||| ||||| ||||||||            |||||||  |||||||||||||| || | |||||| ||||||||    
T  55455155 aatactcatgtctccggatctgcaacgttaacgacgccaaagtcattgtcattgtcattgatcggatctgcacttgctcaaagctaatctttcaacctga 55455056  T
Q  107 atcatataaacaccgcactaagacg 131  Q
    |||| ||||||||||||||||||||    
T  55455055 atcaaataaacaccgcactaagacg 55455031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 31462591 - 31462708
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattg------atcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    |||| |||||||||  |||||||| |||||||||| ||||||||||||      |||  |||||||||||||| || | |||||| |||||||||||| |    
T  31462591 aataatcatgtctctggatctgcaccgttgacgacgccaaagtcattgtcattgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaa 31462690  T
Q  113 taaacaccgcactaagac 130  Q
    ||||| ||||||||||||    
T  31462691 taaacgccgcactaagac 31462708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 2148033 - 2147923
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaaca 118  Q
    ||||||||| |||| || ||| ||||||||| ||||| |||||||||||||| |||| ||||||||| ||   |||||| ||||  |||||| |||||||    
T  2148033 aatactcatctctc-aggtctacaacgttgatgacactaaagtcattgatcagatctacacttgctcaaagataatctt-caactcgaatcaaataaaca 2147936  T
Q  119 ccgcactaagacg 131  Q
    |||||||||||||    
T  2147935 ccgcactaagacg 2147923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 66
Target Start/End: Original strand, 1074739 - 1074786
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattg 66  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  1074739 aatactcatgtctccggatctgcaacgttgacgacgccaaagtcattg 1074786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 35 - 118
Target Start/End: Original strand, 20044715 - 20044798
Alignment:
Q  35 gatctgcaacgttgacgacaccaaagtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaaca 118  Q
    |||||||||||||||||||  |||| | ||||||   || ||||||||||| |||| ||||||||||||||||||| |||||||    
T  20044715 gatctgcaacgttgacgacgtcaaaatgattgattgaatatgcacttgctcaaaactaatcttccaacctgaatcaaataaaca 20044798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 131
Target Start/End: Original strand, 48652289 - 48652403
Alignment:
Q  23 ctcatgtctccagatctgcaacgttgacgacaccaaag------tcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaa 116  Q
    ||||||||||| ||||||||||||||||||| ||||||      |||||||||  |||||| |||| || ||   |||||| |||||| ||||| |||||    
T  48652289 ctcatgtctccggatctgcaacgttgacgacgccaaagtcattttcattgatcggatctgctcttgttcaaagttaatctttcaacctaaatcaaataaa 48652388  T
Q  117 caccgcactaagacg 131  Q
    |||||||||||||||    
T  48652389 caccgcactaagacg 48652403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 131
Target Start/End: Complemental strand, 48855157 - 48855043
Alignment:
Q  23 ctcatgtctccagatctgcaacgttgacgacaccaaagtcattg------atcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaa 116  Q
    ||||||||||| ||||||||||| ||||||  ||||||||||||      |||  |||||||||||||| || | |||||| |||| ||||||| |||||    
T  48855157 ctcatgtctccggatctgcaacggtgacgatgccaaagtcattgtcattgatcggatctgcacttgctcaaagctaatctttcaacatgaatcaaataaa 48855058  T
Q  117 caccgcactaagacg 131  Q
    |||| ||||||||||    
T  48855057 caccacactaagacg 48855043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 200 - 238
Target Start/End: Complemental strand, 27817817 - 27817779
Alignment:
Q  200 attgtcaattttctaaatattgtgcacatctttttaatt 238  Q
    |||||||||||||||||||||||||||||||||||||||    
T  27817817 attgtcaattttctaaatattgtgcacatctttttaatt 27817779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 200 - 238
Target Start/End: Complemental strand, 45667814 - 45667776
Alignment:
Q  200 attgtcaattttctaaatattgtgcacatctttttaatt 238  Q
    |||||||||||||||||||||||||||||||||||||||    
T  45667814 attgtcaattttctaaatattgtgcacatctttttaatt 45667776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 4019876 - 4019827
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgat 68  Q
    |||||||||| |||| ||||||||||||||||||| ||||||||||||||    
T  4019876 aatactcatgcctccggatctgcaacgttgacgacgccaaagtcattgat 4019827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 55446341 - 55446223
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgatcat-------atctgcacttgctccaaacaaatcttccaacctgaatcat 111  Q
    |||||||||| |||| ||||||||||||||||||| | |||||||||| ||||       |||||||||||||| || | |||| | ||| ||||||||     
T  55446341 aatactcatgactccggatctgcaacgttgacgacgctaaagtcattg-tcattgattggatctgcacttgctcaaagctaatccttcaatctgaatcaa 55446243  T
Q  112 ataaacaccgcactaagacg 131  Q
    |||||| |||||||||||||    
T  55446242 ataaaccccgcactaagacg 55446223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 48212618 - 48212506
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaaca 118  Q
    ||||||||||||| | |||||||||  ||||| || ||||||||||||||   ||||||||||||||  | | |||| | ||| |||||||  |||||||    
T  48212618 aatactcatgtcttcggatctgcaatattgacaacgccaaagtcattgattggatctgcacttgctcagagctaatccttcaatctgaatctaataaaca 48212519  T
Q  119 ccgcactaagacg 131  Q
    | |||||||||||    
T  48212518 ctgcactaagacg 48212506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 53962396 - 53962284
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaaca 118  Q
    |||| ||||||| || ||||| ||||||||| ||   |||| ||| ||||   |||||||||||||| || | ||||||  ||||||||||| |||||||    
T  53962396 aatattcatgtcccctgatctccaacgttgatgaagtcaaaatcaatgattggatctgcacttgctcaaagctaatcttttaacctgaatcaaataaaca 53962297  T
Q  119 ccgcactaagacg 131  Q
    |||||||||||||    
T  53962296 ccgcactaagacg 53962284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 131
Target Start/End: Complemental strand, 11819363 - 11819249
Alignment:
Q  23 ctcatgtctccagatctgcaacgttgacgacaccaaagtcattg------atcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaa 116  Q
    ||||||||| | ||||||||||||||||||| ||||||||||||      |||  || ||| | || || || | |||||| |||||||||||| |||||    
T  11819363 ctcatgtcttcggatctgcaacgttgacgacgccaaagtcattgttattgatcggatatgctcctgttcaaagctaatctttcaacctgaatcaaataaa 11819264  T
Q  117 caccgcactaagacg 131  Q
    |||||||||||||||    
T  11819263 caccgcactaagacg 11819249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 131
Target Start/End: Complemental strand, 33637683 - 33637569
Alignment:
Q  23 ctcatgtctccagatctgcaacgttgacgacaccaaagt------cattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaa 116  Q
    ||||||||| | ||||||||||||||||||| |||||||      ||||||||  ||||||  ||| || || | |||||| |||||| ||||| |||||    
T  33637683 ctcatgtctacggatctgcaacgttgacgacgccaaagtcattttcattgatcggatctgcttttgttcaaagctaatctttcaacctaaatcaaataaa 33637584  T
Q  117 caccgcactaagacg 131  Q
    |||||||||||||||    
T  33637583 caccgcactaagacg 33637569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 41868168 - 41868286
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattg------atcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    ||||||||||||||| | ||||||||||||||||  | ||||||||||      |||  |||||||||||||| |||| |||||| |||||||||||| |    
T  41868168 aatactcatgtctccggttctgcaacgttgacgatgctaaagtcattgtcattgatcggatctgcacttgctcaaaactaatctttcaacctgaatcaaa 41868267  T
Q  113 taaacaccgcactaagacg 131  Q
     | || |||||| ||||||    
T  41868268 aatacgccgcacaaagacg 41868286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 4206399 - 4206449
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgatc 69  Q
    |||||| |||||||| ||||| ||||||||||||| |||||||||||||||    
T  4206399 aatacttatgtctcccgatctacaacgttgacgacgccaaagtcattgatc 4206449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 66
Target Start/End: Original strand, 24483529 - 24483571
Alignment:
Q  24 tcatgtctccagatctgcaacgttgacgacaccaaagtcattg 66  Q
    |||||||||||||||||||||||||||||  ||||||||||||    
T  24483529 tcatgtctccagatctgcaacgttgacgatgccaaagtcattg 24483571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 130
Target Start/End: Complemental strand, 31730917 - 31730811
Alignment:
Q  24 tcatgtctccagatctgcaacgttgacgacaccaaagtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaacaccgca 123  Q
    ||||||||| ||||||||||| |||| ||| ||||||| |||||||  || |||||||| || ||   |||||| |||| ||||||| |||||||  |||    
T  31730917 tcatgtctctagatctgcaacattgatgacgccaaagttattgatcggatttgcacttgttcaaagttaatctttcaacttgaatcaaataaacattgca 31730818  T
Q  124 ctaagac 130  Q
    |||||||    
T  31730817 ctaagac 31730811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 129
Target Start/End: Original strand, 39429352 - 39429462
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaaca 118  Q
    ||||||||||||| | |||||| |||||||||||   |||||||||||||   || |||||||||||  | | |||||| |||||| ||| | |||||||    
T  39429352 aatactcatgtcttcggatctgaaacgttgacgatttcaaagtcattgattggatttgcacttgctcagagctaatctttcaacctaaattaaataaaca 39429451  T
Q  119 ccgcactaaga 129  Q
    || ||||||||    
T  39429452 ccacactaaga 39429462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 85
Target Start/End: Complemental strand, 40702713 - 40702647
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgatcatatctgcacttgctc 85  Q
    ||||||||||||||  |||||||||| |||||||| ||||||||||||||   || |||||||||||    
T  40702713 aatactcatgtctcaggatctgcaacattgacgacgccaaagtcattgatagaatatgcacttgctc 40702647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 238
Target Start/End: Complemental strand, 45646977 - 45646939
Alignment:
Q  200 attgtcaattttctaaatattgtgcacatctttttaatt 238  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  45646977 attgtcaattttctaaatattgtgcgcatctttttaatt 45646939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 39340477 - 39340428
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgat 68  Q
    ||||| ||||||||| |||||||||||||||||||  |||||||||||||    
T  39340477 aatacacatgtctccggatctgcaacgttgacgacgacaaagtcattgat 39340428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 53427076 - 53427027
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgat 68  Q
    |||||||| |||| | ||||||||||||||||||| ||||||||||||||    
T  53427076 aatactcaagtcttcggatctgcaacgttgacgacgccaaagtcattgat 53427027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 131
Target Start/End: Original strand, 3961649 - 3961725
Alignment:
Q  55 ccaaagtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaacaccgcactaagacg 131  Q
    ||||||||||||||   |||| || |||||| ||   |||||| |||||||||||| ||||||||||||||||||||    
T  3961649 ccaaagtcattgattgaatctacatttgctcaaagttaatcttacaacctgaatcaaataaacaccgcactaagacg 3961725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 34960754 - 34960794
Alignment:
Q  26 atgtctccagatctgcaacgttgacgacaccaaagtcattg 66  Q
    |||||||| ||||||||||||||||||| ||||||||||||    
T  34960754 atgtctccggatctgcaacgttgacgacgccaaagtcattg 34960794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 127
Target Start/End: Complemental strand, 45047791 - 45047684
Alignment:
Q  26 atgtctccagatctgcaacgttgacgacaccaaa------gtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaacac 119  Q
    |||||||| ||||||||||||||||||| || ||      ||||||||||  |||||||||||||  || | |||||| ||| |||||| | ||||||||    
T  45047791 atgtctccggatctgcaacgttgacgacgccgaagtcattgtcattgatcgaatctgcacttgctaaaagctaatctttcaatctgaataaaataaacac 45047692  T
Q  120 cgcactaa 127  Q
    ||||||||    
T  45047691 cgcactaa 45047684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 50637817 - 50637929
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaaca 118  Q
    |||||||||||||| | || ||||||||||||| | | ||| ||||| || ||||||||||||||||  | | |||||| |||||| ||  | ||||| |    
T  50637817 aatactcatgtctcgatatttgcaacgttgacgtcgcaaaactcatttattatatctgcacttgctcggagctaatctttcaacctaaaataaataaaaa 50637916  T
Q  119 ccgcactaagacg 131  Q
     ||||||||||||    
T  50637917 gcgcactaagacg 50637929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 60 - 131
Target Start/End: Complemental strand, 3457176 - 3457105
Alignment:
Q  60 gtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaacaccgcactaagacg 131  Q
    ||||||||||  || ||||||||||| || | |||||| |||| ||||||| |||||||||| |||||||||    
T  3457176 gtcattgatcggatttgcacttgctcaaagctaatctttcaacttgaatcaaataaacaccgtactaagacg 3457105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 19 - 66
Target Start/End: Original strand, 19861124 - 19861171
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattg 66  Q
    ||||||||||||||| ||||||||||||||||||   |||||||||||    
T  19861124 aatactcatgtctccggatctgcaacgttgacgatgtcaaagtcattg 19861171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 30156126 - 30156244
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattg------atcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    ||||| |||||| || |||||||||| |||||||| ||||| ||||||      |||  ||||| |||||||| || | ||| || ||||| |||||| |    
T  30156126 aatacccatgtccccggatctgcaaccttgacgacgccaaaatcattgttattgatcggatctgaacttgctcaaagctaatttttcaaccagaatcaaa 30156225  T
Q  113 taaacaccgcactaagacg 131  Q
    |||||||||||||||||||    
T  30156226 taaacaccgcactaagacg 30156244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 32080603 - 32080646
Alignment:
Q  23 ctcatgtctccagatctgcaacgttgacgacaccaaagtcattg 66  Q
    ||||||||||| ||||||||||||||| ||| ||||||||||||    
T  32080603 ctcatgtctccggatctgcaacgttgatgacgccaaagtcattg 32080646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 60 - 127
Target Start/End: Original strand, 34103640 - 34103706
Alignment:
Q  60 gtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaacaccgcactaa 127  Q
    ||||||||||  |||||||||||||| || | |||||| | |||||||||| ||||||||||||||||    
T  34103640 gtcattgatcggatctgcacttgctc-aatctaatctttcgacctgaatcaaataaacaccgcactaa 34103706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 26 - 65
Target Start/End: Complemental strand, 48401395 - 48401356
Alignment:
Q  26 atgtctccagatctgcaacgttgacgacaccaaagtcatt 65  Q
    |||||||| ||||||||||||||||||| |||||||||||    
T  48401395 atgtctccggatctgcaacgttgacgacgccaaagtcatt 48401356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 21084574 - 21084620
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcatt 65  Q
    ||||| ||| ||||||||||||||| ||||||||||||||| |||||    
T  21084574 aatacccatatctccagatctgcaatgttgacgacaccaaattcatt 21084620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 238
Target Start/End: Original strand, 21934158 - 21934196
Alignment:
Q  200 attgtcaattttctaaatattgtgcacatctttttaatt 238  Q
    ||||| ||||||||||||||||||||||||| |||||||    
T  21934158 attgttaattttctaaatattgtgcacatctctttaatt 21934196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 25084302 - 25084252
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgatc 69  Q
    |||| |||||||||  ||||||||||||||||||||||||  |||||||||    
T  25084302 aatattcatgtctcatgatctgcaacgttgacgacaccaacatcattgatc 25084252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 129
Target Start/End: Original strand, 25135162 - 25135272
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaaca 118  Q
    |||| |||||||| || |||||||||||||||||   |||| ||||||||    | ||||||||||| || | ||| || |||| ||||||| |||||||    
T  25135162 aatattcatgtcttcatatctgcaacgttgacgatgtcaaaatcattgattgattttgcacttgctcaaatctaatatttcaacttgaatcagataaaca 25135261  T
Q  119 ccgcactaaga 129  Q
    | |||||||||    
T  25135262 ctgcactaaga 25135272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 238
Target Start/End: Original strand, 37030598 - 37030636
Alignment:
Q  200 attgtcaattttctaaatattgtgcacatctttttaatt 238  Q
    |||||||||||||||||||||||| ||||||||| ||||    
T  37030598 attgtcaattttctaaatattgtgtacatcttttcaatt 37030636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 66
Target Start/End: Complemental strand, 38530220 - 38530178
Alignment:
Q  24 tcatgtctccagatctgcaacgttgacgacaccaaagtcattg 66  Q
    |||||||||| |||||||||||||||||||  |||||||||||    
T  38530220 tcatgtctccggatctgcaacgttgacgacgtcaaagtcattg 38530178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 68
Target Start/End: Original strand, 913160 - 913201
Alignment:
Q  27 tgtctccagatctgcaacgttgacgacaccaaagtcattgat 68  Q
    ||||||| ||||||||||||||| ||| ||||||||||||||    
T  913160 tgtctccggatctgcaacgttgatgactccaaagtcattgat 913201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 2598356 - 2598307
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgat 68  Q
    ||||||||||||| |  || |||||| |||||||||||||||||||||||    
T  2598356 aatactcatgtcttcgaatttgcaacattgacgacaccaaagtcattgat 2598307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 26412568 - 26412519
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgat 68  Q
    |||| |||||||||| ||| ||||||||||||||| ||||| ||||||||    
T  26412568 aatattcatgtctccggatttgcaacgttgacgacgccaaactcattgat 26412519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 36734631 - 36734663
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacg 51  Q
    |||||||||| ||||||||||||||||||||||    
T  36734631 aatactcatgcctccagatctgcaacgttgacg 36734663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 51990720 - 51990752
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacg 51  Q
    ||||||||||||||| |||||||||||||||||    
T  51990720 aatactcatgtctccggatctgcaacgttgacg 51990752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 131
Target Start/End: Original strand, 54238912 - 54238981
Alignment:
Q  60 gtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaacaccgcactaagacg 131  Q
    ||||||||||  || ||||||||||| || | |||||| |||||||||||| ||  ||||||||||||||||    
T  54238912 gtcattgatcggatatgcacttgctcaaatctaatctttcaacctgaatcaaat--acaccgcactaagacg 54238981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1379 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold1379
Description:

Target: scaffold1379; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 20 - 127
Target Start/End: Original strand, 927 - 1034
Alignment:
Q  20 atactcatgtctccagatctgcaacgttgacgacaccaaagtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaacac 119  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||||  ||||||| || ||| || | |||||| |||||||||||| ||| ||||    
T  927 atactcatgtctccggatctgcaacgttgatgacaccaaagtcattgatcgaatctgcagtttctcaaagctaatctttcaacctgaatcaaatatacac 1026  T
Q  120 cgcactaa 127  Q
    ||||||||    
T  1027 cgcactaa 1034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1379; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 60 - 129
Target Start/End: Complemental strand, 212 - 143
Alignment:
Q  60 gtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaacaccgcactaaga 129  Q
    |||||||| || || ||||||||||| || | |||||| |||||||||||| |||||||| |||||||||    
T  212 gtcattgaccagatatgcacttgctcaaagctaatctttcaacctgaatcaaataaacacagcactaaga 143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 57; Significance: 9e-24; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 6967 - 7079
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaaca 118  Q
    ||||||||||||||| ||||||||||||| ||||| |||||||||||||||  ||||||||||||||||| | ||||||  |||| |||| | |||||||    
T  6967 aatactcatgtctccggatctgcaacgttaacgacgccaaagtcattgatcggatctgcacttgctccaagctaatcttttaacccgaattaaataaaca 7066  T
Q  119 ccgcactaagacg 131  Q
    | ||||| |||||    
T  7067 ctgcacttagacg 7079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 3904 - 4022
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaag------tcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    ||||||||||||||||||||||||||||||||||  ||||||      |||||||||| |||||||||||||| || | ||| || |||||||||| | |    
T  3904 aatactcatgtctccagatctgcaacgttgacgatgccaaagtcattttcattgatcagatctgcacttgctcaaagctaatatttcaacctgaattaaa 4003  T
Q  113 taaacaccgcactaagacg 131  Q
    |||||||||||||||||||    
T  4004 taaacaccgcactaagacg 4022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0536 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 21 - 127
Target Start/End: Complemental strand, 3182 - 3070
Alignment:
Q  21 tactcatgtctccagatctgcaacgttgacgacaccaaagtc------attgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatata 114  Q
    ||||||||||||| ||| ||||||||||||||||||||||||      |||||||  ||||||||||| || || | |||||| |||||||||||| |||    
T  3182 tactcatgtctccggatttgcaacgttgacgacaccaaagtcattgtcattgatcggatctgcacttgttcaaagctaatctttcaacctgaatcaaata 3083  T
Q  115 aacaccgcactaa 127  Q
    ||||||| |||||    
T  3082 aacaccgtactaa 3070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 129
Target Start/End: Complemental strand, 74448 - 74332
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtc------attgatcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    ||||||||||||||| ||||||||||||||||||  ||||||||      |||||||  |||||||||||||| || | |||||| |||||||||||| |    
T  74448 aatactcatgtctccggatctgcaacgttgacgatgccaaagtcattgtcattgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaa 74349  T
Q  113 taaacaccgcactaaga 129  Q
    ||||| ||| |||||||    
T  74348 taaactccgtactaaga 74332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 13082 - 13200
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattg------atcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    ||||||||||||| | |||||||||||||||||||  |||||||||||      |||  || ||||||||||| || | |||||| |||||||||||| |    
T  13082 aatactcatgtctacggatctgcaacgttgacgacgtcaaagtcattgtcattgatcggatttgcacttgctcaaagctaatctttcaacctgaatcaaa 13181  T
Q  113 taaacaccgcactaagacg 131  Q
    |||||||| ||||||||||    
T  13182 taaacacctcactaagacg 13200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 81
Target Start/End: Original strand, 2279 - 2341
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgatcatatctgcactt 81  Q
    ||||||||||||||| |||||||||| |||||||| |||||||||||||||  ||||||||||    
T  2279 aatactcatgtctccggatctgcaacattgacgacgccaaagtcattgatcggatctgcactt 2341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 131
Target Start/End: Original strand, 2343 - 2375
Alignment:
Q  99 caacctgaatcatataaacaccgcactaagacg 131  Q
    |||||||||||| ||||||||||||||||||||    
T  2343 caacctgaatcaaataaacaccgcactaagacg 2375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 127
Target Start/End: Original strand, 404098 - 404205
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaaca 118  Q
    ||||||||||||| | ||||||||| |||||| ||  ||||||||||||||  |||||||| |||| ||||   ||||| |||||||||||| |||||||    
T  404098 aatactcatgtcttcggatctgcaatgttgacaacgtcaaagtcattgatcgaatctgcacatgct-caaagctatctttcaacctgaatcaaataaaca 404196  T
Q  119 ccgcactaa 127  Q
    || ||||||    
T  404197 ccacactaa 404205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1350 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold1350
Description:

Target: scaffold1350; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 60 - 131
Target Start/End: Complemental strand, 1811 - 1740
Alignment:
Q  60 gtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaacaccgcactaagacg 131  Q
    ||||||||||  ||||| |||||||| || | |||||| |||||||||||| ||||||||||||||||||||    
T  1811 gtcattgatcggatctgtacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcactaagacg 1740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 35368 - 35250
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcat------tgatcatatctgcacttgctccaaacaaatcttccaacctgaatcata 112  Q
    ||||||||||| ||| ||||||||||||||||||| ||||||||||      || ||  || ||||||||||| || | ||| || |||||| ||||| |    
T  35368 aatactcatgtatccggatctgcaacgttgacgacgccaaagtcattgtcaatggtcggatttgcacttgctcaaagctaatatttcaacctaaatcaaa 35269  T
Q  113 taaacaccgcactaagacg 131  Q
    |||||||||||||||||||    
T  35268 taaacaccgcactaagacg 35250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1327 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold1327
Description:

Target: scaffold1327; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 200 - 238
Target Start/End: Complemental strand, 1160 - 1122
Alignment:
Q  200 attgtcaattttctaaatattgtgcacatctttttaatt 238  Q
    |||||||||||||||||||||||||||||||||||||||    
T  1160 attgtcaattttctaaatattgtgcacatctttttaatt 1122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0999 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0999
Description:

Target: scaffold0999; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 85
Target Start/End: Complemental strand, 1982 - 1916
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgatcatatctgcacttgctc 85  Q
    |||||| |||||||  ||||||||||||||| ||| |||||||||||||||  ||||||||||||||    
T  1982 aatacttatgtctctcgatctgcaacgttgatgacgccaaagtcattgatcggatctgcacttgctc 1916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0202 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0202
Description:

Target: scaffold0202; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 129
Target Start/End: Original strand, 22469 - 22579
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgatcatatctgcacttgctccaaacaaatcttccaacctgaatcatataaaca 118  Q
    ||||||||||| ||  |||||| |||||||| ||||| |||||| |||||   ||||||||||| || |||| |||||| ||||| |||||| ||| |||    
T  22469 aatactcatgtttctggatctgtaacgttgatgacacaaaagtcgttgattgaatctgcacttgatcaaaactaatcttacaaccagaatcaaatacaca 22568  T
Q  119 ccgcactaaga 129  Q
    | |||||||||    
T  22569 ctgcactaaga 22579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 19 - 82
Target Start/End: Original strand, 136910 - 136973
Alignment:
Q  19 aatactcatgtctccagatctgcaacgttgacgacaccaaagtcattgatcatatctgcacttg 82  Q
    ||||| ||||||||  ||||||||||||||||||| |||||||| |||||   |||||||||||    
T  136910 aatacccatgtctctggatctgcaacgttgacgactccaaagtcgttgatttgatctgcacttg 136973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University