View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17721_low_21 (Length: 337)
Name: NF17721_low_21
Description: NF17721
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17721_low_21 |
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Alignment Details
Target: chr7 (Bit Score: 254; Significance: 1e-141; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 22 - 325
Target Start/End: Original strand, 13299732 - 13300032
Alignment:
| Q |
22 |
gcggaaacatcaaaaactccatgccaggatcgataacaattgcggccagccggccacggatagtgttcctaaacaaaattatatttgatgatggcattgt |
121 |
Q |
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| T |
13299732 |
gcggaaacatcaaaaactctatgtcaggatcgataacaattgcggccagccggccacggatagtgttcctaaacaaaattagttttgatgatggcattgt |
13299831 |
T |
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| Q |
122 |
tgaagatacataaactataaggtacttgtttgtgattccaacagataaactttgtcgttagtgagaacatgaagttaggccaatgacagcatagtataga |
221 |
Q |
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| T |
13299832 |
tgaagttacataaacaataaggtacttgtttgtgattccaactgataaactttgtcgttagtgagaacatgaagttaggccaatgacagcacagtataga |
13299931 |
T |
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| Q |
222 |
gaaaaagcattgatcatggtgtaccaaacttgaactttagttaaaaaatctctaacacttattcaaacaaagggtatagaaggtgactcaatagacttgt |
321 |
Q |
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| T |
13299932 |
gcaaaagcat---tcatggtgtaccaaacttgaactttagttaaaaaatctctaacacttattcaaacaaagggtatagaaggtgactcaatagacttgt |
13300028 |
T |
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| Q |
322 |
cctt |
325 |
Q |
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|||| |
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| T |
13300029 |
cctt |
13300032 |
T |
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