View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17721_low_22 (Length: 334)

Name: NF17721_low_22
Description: NF17721
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17721_low_22
NF17721_low_22
[»] chr7 (58 HSPs)
chr7 (1-155)||(660853-661007)
chr7 (15-223)||(22069953-22070161)
chr7 (15-221)||(22080712-22080918)
chr7 (14-223)||(22063484-22063693)
chr7 (13-215)||(20351945-20352147)
chr7 (14-159)||(22100399-22100544)
chr7 (3-223)||(6864815-6865034)
chr7 (13-223)||(20361220-20361430)
chr7 (13-223)||(20374521-20374731)
chr7 (1-59)||(19604469-19604527)
chr7 (1-66)||(14076677-14076742)
chr7 (1-66)||(14386705-14386770)
chr7 (1-66)||(19344581-19344646)
chr7 (18-97)||(9807792-9807871)
chr7 (28-131)||(20361064-20361167)
chr7 (1-103)||(19351075-19351177)
chr7 (13-131)||(20338858-20338976)
chr7 (182-288)||(22088373-22088476)
chr7 (1-65)||(29454109-29454173)
chr7 (2-65)||(12819923-12819986)
chr7 (11-65)||(29899374-29899428)
chr7 (1-66)||(18952911-18952976)
chr7 (1-66)||(18982958-18983023)
chr7 (1-66)||(18997604-18997669)
chr7 (4-222)||(20126193-20126415)
chr7 (18-131)||(20133340-20133453)
chr7 (18-223)||(20140841-20141046)
chr7 (4-65)||(36263053-36263114)
chr7 (2-66)||(22021391-22021455)
chr7 (13-65)||(29106814-29106866)
chr7 (1-65)||(29921999-29922063)
chr7 (1-112)||(15571901-15572012)
chr7 (176-223)||(16839562-16839609)
chr7 (2-65)||(19722018-19722081)
chr7 (2-65)||(29445663-29445726)
chr7 (1-103)||(19357872-19357974)
chr7 (11-65)||(26256775-26256829)
chr7 (1-66)||(1985961-1986026)
chr7 (1-102)||(13416917-13417018)
chr7 (1-66)||(20058063-20058128)
chr7 (5-66)||(22028627-22028688)
chr7 (11-63)||(15443966-15444018)
chr7 (1-57)||(19597661-19597717)
chr7 (1-57)||(19645636-19645692)
chr7 (1-65)||(29867236-29867300)
chr7 (13-65)||(36260253-36260305)
chr7 (256-303)||(6865064-6865111)
chr7 (176-223)||(16846645-16846692)
chr7 (8-95)||(21218721-21218808)
chr7 (176-218)||(18326068-18326110)
chr7 (1-59)||(18514793-18514851)
chr7 (4-65)||(20414882-20414943)
chr7 (11-64)||(26217968-26218021)
chr7 (1-54)||(29881267-29881320)
chr7 (4-65)||(35205933-35205994)
chr7 (10-66)||(19326000-19326056)
chr7 (1-65)||(19637223-19637287)
chr7 (1-65)||(29431007-29431071)
[»] chr4 (14 HSPs)
chr4 (1-215)||(11970988-11971202)
chr4 (1-137)||(11981689-11981825)
chr4 (1-103)||(53774802-53774904)
chr4 (1-65)||(3565744-3565808)
chr4 (1-65)||(3557726-3557790)
chr4 (1-66)||(35767017-35767082)
chr4 (4-59)||(1686294-1686349)
chr4 (1-65)||(3560964-3561028)
chr4 (11-103)||(10464231-10464323)
chr4 (1-65)||(53430105-53430169)
chr4 (1-99)||(8443460-8443558)
chr4 (41-103)||(10475169-10475231)
chr4 (1-66)||(837775-837840)
chr4 (1-65)||(19361442-19361506)
[»] chr1 (9 HSPs)
chr1 (4-221)||(15961072-15961289)
chr1 (2-65)||(39379068-39379131)
chr1 (4-62)||(4014974-4015032)
chr1 (4-65)||(21855392-21855453)
chr1 (1-65)||(4570927-4570991)
chr1 (4-65)||(4366504-4366565)
chr1 (1-66)||(50645491-50645556)
chr1 (1-65)||(10218985-10219049)
chr1 (1-65)||(17560779-17560843)
[»] scaffold0867 (1 HSPs)
scaffold0867 (14-159)||(4688-4833)
[»] chr6 (12 HSPs)
chr6 (1-66)||(6921356-6921421)
chr6 (1-113)||(20770602-20770714)
chr6 (1-112)||(6947886-6947997)
chr6 (1-103)||(14749359-14749461)
chr6 (1-66)||(6954525-6954590)
chr6 (1-66)||(6935224-6935289)
chr6 (1-54)||(17369675-17369728)
chr6 (1-65)||(6942973-6943037)
chr6 (1-65)||(24950150-24950214)
chr6 (10-66)||(24254441-24254497)
chr6 (14-63)||(5979029-5979078)
chr6 (14-63)||(33576172-33576221)
[»] chr2 (14 HSPs)
chr2 (1-114)||(18908815-18908928)
chr2 (1-66)||(18913563-18913628)
chr2 (1-66)||(18920771-18920836)
chr2 (1-113)||(554428-554540)
chr2 (1-62)||(14514903-14514964)
chr2 (16-65)||(20699461-20699510)
chr2 (11-66)||(20975557-20975612)
chr2 (1-99)||(25377040-25377138)
chr2 (4-65)||(20980604-20980665)
chr2 (5-58)||(21021279-21021332)
chr2 (45-112)||(1826329-1826395)
chr2 (18-65)||(20712556-20712603)
chr2 (11-65)||(25698507-25698561)
chr2 (16-65)||(20967700-20967749)
[»] chr5 (7 HSPs)
chr5 (1-96)||(29597558-29597653)
chr5 (1-59)||(18964836-18964894)
chr5 (4-65)||(24330908-24330969)
chr5 (1-103)||(29647638-29647740)
chr5 (14-63)||(23086784-23086833)
chr5 (1-66)||(29642358-29642423)
chr5 (2-66)||(28763912-28763976)
[»] chr8 (2 HSPs)
chr8 (4-99)||(27618457-27618552)
chr8 (11-63)||(29390288-29390340)
[»] chr3 (3 HSPs)
chr3 (1-59)||(3625740-3625798)
chr3 (11-66)||(25901295-25901350)
chr3 (11-66)||(25915313-25915368)
[»] scaffold0649 (1 HSPs)
scaffold0649 (16-65)||(5438-5487)
[»] scaffold0354 (1 HSPs)
scaffold0354 (1-57)||(7471-7527)
[»] scaffold0097 (1 HSPs)
scaffold0097 (18-65)||(16395-16442)
[»] scaffold0064 (1 HSPs)
scaffold0064 (4-64)||(24206-24266)


Alignment Details
Target: chr7 (Bit Score: 143; Significance: 4e-75; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 660853 - 661007
Alignment:
Q  1 aattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatgtgattgtttgaaatcgtgacaaaaacaaagacaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | |||||||||||||||||||||||||||||||    
T  660853 aattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaacgagtttgtttgaaatcgtgacaaaaacaaagacaa 660952  T
Q  101 tcctttaacacacttagatttggtataacaaatggcatttcttggaaacctcgag 155  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  660953 tcctttaacacacttagatttggtataacaaatggcatttcttggaaacctcgag 661007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 15 - 223
Target Start/End: Complemental strand, 22070161 - 22069953
Alignment:
Q  15 gagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatgtgattgtttgaaatcgtgacaaaaacaaagacaatcctttaacacact 114  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||||| |||||| | | |||||||||| ||| |||||||||||||||||||||| |||||    
T  22070161 gagtccaagactcttgaactccaaattgcttcatttgccatataataaaatgagttcgtttgaaatcatgagaaaaacaaagacaatcctttaaaacact 22070062  T
Q  115 tagatttggtataacaaatggcatttcttggaaacctcgaggagggagtaactcagaatgcgtctcggtgcccaaattaagtgaaataatcacaaattgc 214  Q
    ||||||||||||||||||||||| ||| | ||||||  ||||||| |  |||| || ||| |||||||| ||||||| |||||||||||||||||||| |    
T  22070061 tagatttggtataacaaatggcacttcatcgaaaccgtgaggaggcaacaacttagtatgtgtctcggtacccaaatcaagtgaaataatcacaaattcc 22069962  T
Q  215 tcaatagta 223  Q
    |||||||||    
T  22069961 tcaatagta 22069953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 15 - 221
Target Start/End: Complemental strand, 22080918 - 22080712
Alignment:
Q  15 gagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatgtgattgtttgaaatcgtgacaaaaacaaagacaatcctttaacacact 114  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||||| |||||| | |||||||||||| ||| |||||||||||||||||||||||| |||    
T  22080918 gagtccaagactcttgaactccaaattgcttcatttgccatataataaaatgagtttgtttgaaatcatgagaaaaacaaagacaatcctttaacatact 22080819  T
Q  115 tagatttggtataacaaatggcatttcttggaaacctcgaggagggagtaactcagaatgcgtctcggtgcccaaattaagtgaaataatcacaaattgc 214  Q
    |||||||||||||||||| || | |||   |||||   |||||||  | |||| || ||| |||||||||||||||| |||||||||||||| ||||||     
T  22080818 tagatttggtataacaaagggaacttcaacgaaactgtgaggaggccgaaacttagcatgtgtctcggtgcccaaatcaagtgaaataatcataaattgt 22080719  T
Q  215 tcaatag 221  Q
    |||||||    
T  22080718 tcaatag 22080712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 14 - 223
Target Start/End: Complemental strand, 22063693 - 22063484
Alignment:
Q  14 tgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatgtgattgtttgaaatcgtgacaaaaacaaagacaatcctttaacacac 113  Q
    |||||||||||||||| || || |||||||||||| ||||||||||||||||| | |||||||||||| ||| ||||||||||| |||| ||||| ||||    
T  22063693 tgagtccaagactcttgaaatccaaattccttcatttgccatataacaaaatgagtttgtttgaaatcatgaaaaaaacaaagataatcatttaagacac 22063594  T
Q  114 ttagatttggtataacaaatggcatttcttggaaacctcgaggagggagtaactcagaatgcgtctcggtgcccaaattaagtgaaataatcacaaattg 213  Q
    |||| ||||||||||||||||| | |||   ||||||  ||||||| |  || | || ||  | ||| |||||||||| |||||||||||||||||||||    
T  22063593 ttagttttggtataacaaatggtacttcactgaaaccatgaggaggaaacaatttagtatatgcctcagtgcccaaatcaagtgaaataatcacaaattg 22063494  T
Q  214 ctcaatagta 223  Q
    | ||||||||    
T  22063493 cccaatagta 22063484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 13 - 215
Target Start/End: Complemental strand, 20352147 - 20351945
Alignment:
Q  13 ttgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatgtgattgtttgaaatcgtgacaaaaacaaagacaatcctttaacaca 112  Q
    ||||||||| || |||||||||| |||||||||||| | |||||| |||||||| | ||||||| |||| ||  ||||||||||||||||||||||||||    
T  20352147 ttgagtccatgaatcttcaactccaaattccttcatttcccatattacaaaatgagtttgtttgtaatcatgtgaaaaacaaagacaatcctttaacaca 20352048  T
Q  113 cttagatttggtataacaaatggcatttcttggaaacctcgaggagggagtaactcagaatgcgtctcggtgcccaaattaagtgaaataatcacaaatt 212  Q
    ||||||| ||||| ||| | ||||| ||||  ||||||| |||| || |  | |  ||||||||| || ||| |||||| ||| ||||| ||||||||||    
T  20352047 cttagatatggtacaacgattggcacttctgtgaaaccttgaggtggcaaaagcagagaatgcgtttcagtgtccaaatcaagagaaatgatcacaaatt 20351948  T
Q  213 gct 215  Q
    |||    
T  20351947 gct 20351945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 14 - 159
Target Start/End: Complemental strand, 22100544 - 22100399
Alignment:
Q  14 tgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatgtgattgtttgaaatcgtgacaaaaacaaagacaatcctttaacacac 113  Q
    |||||||||||||||| ||||| ||||| |||||| |||||||||| |||||| | || ||||||||| ||| ||||||||||| |||| ||||| ||||    
T  22100544 tgagtccaagactcttgaactccaaatttcttcatttgccatataataaaatgagtttttttgaaatcatgagaaaaacaaagataatcatttaagacac 22100445  T
Q  114 ttagatttggtataacaaatggcatttcttggaaacctcgaggagg 159  Q
    ||||||| |||||||||| ||||| ||| | ||||||  |||||||    
T  22100444 ttagattaggtataacaattggcacttcattgaaaccatgaggagg 22100399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 3 - 223
Target Start/End: Original strand, 6864815 - 6865034
Alignment:
Q  3 ttttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatgtgattgtttgaaatcgtgacaaaaacaaagacaatc 102  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||   |||||| || ||||| | |||||||||||| ||| ||||| | ||||||||    
T  6864815 ttttaaggaactgagtccaagactcttcaactccaaattccttcattaaccatattac-aaatgagtttgtttgaaatcatgagaaaaatagagacaatc 6864913  T
Q  103 ctttaacacacttagatttggtataacaaatggcatttcttggaaacctcgaggagg-gagtaactcagaatgcgtctcggtgcccaaattaagtgaaat 201  Q
    ||||||||| |||||||||||   ||||| ||||| |||   ||||||  ||||||| ||  |||  || |||  |||  ||| |||||| |||||||||    
T  6864914 ctttaacacgcttagatttggggcaacaattggcacttcaatgaaaccctgaggaggagacaaac-gagtatgtatcttagtgtccaaatgaagtgaaat 6865012  T
Q  202 aatcacaaattgctcaatagta 223  Q
    |||| |||||||||||||||||    
T  6865013 aatctcaaattgctcaatagta 6865034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 13 - 223
Target Start/End: Original strand, 20361220 - 20361430
Alignment:
Q  13 ttgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatgtgattgtttgaaatcgtgacaaaaacaaagacaatcctttaacaca 112  Q
    ||||| ||| || |||||||||| ||||||||| || | | | || |||||||| | ||||||| |||| ||  ||||||||||||||||||||| ||||    
T  20361220 ttgagaccatgaatcttcaactccaaattcctttatttcctaaatcacaaaatgagtttgtttgtaatcatgtgaaaaacaaagacaatcctttagcaca 20361319  T
Q  113 cttagatttggtataacaaatggcatttcttggaaacctcgaggagggagtaactcagaatgcgtctcggtgcccaaattaagtgaaataatcacaaatt 212  Q
    ||||||| ||||| ||||| ||||| |||   ||||||| |||| || |  |  | |||| |||| ||||||||||||| ||| ||||| ||||||||||    
T  20361320 cttagatatggtacaacaattggcacttccgtgaaaccttgaggtggcaaaagttgagaaagcgtttcggtgcccaaatcaagagaaatgatcacaaatt 20361419  T
Q  213 gctcaatagta 223  Q
    | | |||||||    
T  20361420 gatgaatagta 20361430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 223
Target Start/End: Original strand, 20374521 - 20374731
Alignment:
Q  13 ttgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatgtgattgtttgaaatcgtgacaaaaacaaagacaatcctttaacaca 112  Q
    |||| |||| || ||| |||||| |||||||||||| | |||||| |||||||| | ||||||| |||| ||  ||||||||||||||||||||| ||||    
T  20374521 ttgaatccatgaatctccaactccaaattccttcatttcccatattacaaaatgagtttgtttgtaatcatgtgaaaaacaaagacaatcctttagcaca 20374620  T
Q  113 cttagatttggtataacaaatggcatttcttggaaacctcgaggagggagtaactcagaatgcgtctcggtgcccaaattaagtgaaataatcacaaatt 212  Q
    ||||||| ||||  |||||  |||| |||   ||| ||| ||||||| |  | || |||||| || || || ||||||| ||| |||||||| | |||||    
T  20374621 cttagatatggtgcaacaatcggcacttccatgaagccttgaggaggcaaaagctgagaatgtgtttcagtacccaaatcaagagaaataatgataaatt 20374720  T
Q  213 gctcaatagta 223  Q
    ||| |||||||    
T  20374721 gctgaatagta 20374731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 19604469 - 19604527
Alignment:
Q  1 aattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataa 59  Q
    ||||||||||||||||||||| || |||||||||| |||||||||||||||||||||||    
T  19604469 aattttaaggaattgagtccaggagtcttcaactccaaattccttcatctgccatataa 19604527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 14076742 - 14076677
Alignment:
Q  1 aattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatg 66  Q
    ||||||||| |||||||||||||| |||||||||| |||||||||||| ||||||||||| |||||    
T  14076742 aattttaagaaattgagtccaagagtcttcaactccaaattccttcatttgccatataacgaaatg 14076677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 14386770 - 14386705
Alignment:
Q  1 aattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatg 66  Q
    ||||||||| |||||||||||||| |||||||||| |||||||||||| ||||||||||| |||||    
T  14386770 aattttaagaaattgagtccaagagtcttcaactccaaattccttcatttgccatataacgaaatg 14386705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 19344581 - 19344646
Alignment:
Q  1 aattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatg 66  Q
    ||||||||| |||||||||||||| | |||||||| ||||||| ||||||||||||||||||||||    
T  19344581 aattttaagaaattgagtccaagattgttcaactccaaattccatcatctgccatataacaaaatg 19344646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 18 - 97
Target Start/End: Complemental strand, 9807871 - 9807792
Alignment:
Q  18 tccaagactcttcaactcgaaattccttcatctgccatataacaaaatgtgattgtttgaaatcgtgacaaaaacaaaga 97  Q
    |||||||||||||||||| |||||||||||||||||||||||| ||||  | ||  || ||||| |||||||||||||||    
T  9807871 tccaagactcttcaactccaaattccttcatctgccatataacgaaatcggttttcttcaaatcatgacaaaaacaaaga 9807792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 28 - 131
Target Start/End: Complemental strand, 20361167 - 20361064
Alignment:
Q  28 ttcaactcgaaattccttcatctgccatataacaaaatgtgattgtttgaaatcgtgacaaaaacaaagacaatcctttaacacacttagatttggtata 127  Q
    |||||||| |||||||||||| |  ||||  |||||||| | ||||||| |||| ||  |||||||||||||||||| |||||||||||||| ||||| |    
T  20361167 ttcaactccaaattccttcatttctcataatacaaaatgagtttgtttgtaatcatgtgaaaaacaaagacaatcctctaacacacttagatatggtaca 20361068  T
Q  128 acaa 131  Q
    ||||    
T  20361067 acaa 20361064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 19351075 - 19351177
Alignment:
Q  1 aattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatgtgattgtttgaaatcgtgacaaaaacaaagacaa 100  Q
    |||||| |||||| ||||||||||||| ||||||| ||||||| |||||||||||| ||||||||| |    ||||| || |||| ||||||| ||||||    
T  19351075 aattttgaggaatggagtccaagactcctcaactccaaattccatcatctgccataaaacaaaatgggtccttttgagattgtgagaaaaacatagacaa 19351174  T
Q  101 tcc 103  Q
    |||    
T  19351175 tcc 19351177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 131
Target Start/End: Complemental strand, 20338976 - 20338858
Alignment:
Q  13 ttgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatgtgattgtttgaaatcgtgacaaaaacaaagacaatcctttaacaca 112  Q
    |||||||||||| ||||||||||  ||||||||||| | |||||| |||||||| | || || | |||| ||  ||||||||||| | || |||||||||    
T  20338976 ttgagtccaagaatcttcaactcctaattccttcattttccatattacaaaatgagttttttggtaatcatgggaaaaacaaagatagtcgtttaacaca 20338877  T
Q  113 cttagatttggtataacaa 131  Q
    |||| |||||||| |||||    
T  20338876 cttaaatttggtacaacaa 20338858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 182 - 288
Target Start/End: Complemental strand, 22088476 - 22088373
Alignment:
Q  182 gtgcccaaattaagtgaaataatcacaaattgctcaatagtatcaatatccttgcattcgtagtcctcgtcgttgtaattgcgaattgccaaccaattaa 281  Q
    |||||||||| ||||||||||||||||||||||||||||||   |||| ||||||| |  || || ||  |  |||||||| ||||||||||||||||||    
T  22088476 gtgcccaaatcaagtgaaataatcacaaattgctcaatagt---aatacccttgcaattataatcatcaccaatgtaattgtgaattgccaaccaattaa 22088380  T
Q  282 aactacc 288  Q
     ||||||    
T  22088379 cactacc 22088373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 29454109 - 29454173
Alignment:
Q  1 aattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaat 65  Q
    |||||||| ||||||||||||||| |||||||||| ||||| | ||||| |||||||||||||||    
T  29454109 aattttaaagaattgagtccaagaatcttcaactccaaatttcatcatccgccatataacaaaat 29454173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 65
Target Start/End: Original strand, 12819923 - 12819986
Alignment:
Q  2 attttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaat 65  Q
    |||||||||||||||||||| || | |||||||| ||||||| |||||||||||| ||||||||    
T  12819923 attttaaggaattgagtccaggattgttcaactccaaattccgtcatctgccatacaacaaaat 12819986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 29899428 - 29899374
Alignment:
Q  11 aattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaat 65  Q
    ||||||||||| ||||||||||| | ||||| |||||||||||||||||||||||    
T  29899428 aattgagtccaggactcttcaaccccaaatttcttcatctgccatataacaaaat 29899374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 18952911 - 18952976
Alignment:
Q  1 aattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatg 66  Q
    |||||||||||| |||||||| ||||  ||||||| ||||||||||||||||||||| | ||||||    
T  18952911 aattttaaggaactgagtccatgacttgtcaactccaaattccttcatctgccatatgataaaatg 18952976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 18982958 - 18983023
Alignment:
Q  1 aattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatg 66  Q
    |||||||||||| |||||||| ||||  ||||||| ||||||||||||||||||||| | ||||||    
T  18982958 aattttaaggaactgagtccaggacttgtcaactccaaattccttcatctgccatatgataaaatg 18983023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 18997604 - 18997669
Alignment:
Q  1 aattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatg 66  Q
    |||||||||||| |||||||| ||||  ||||||| ||||||||||||||||||||| | ||||||    
T  18997604 aattttaaggaactgagtccaggacttgtcaactccaaattccttcatctgccatatgataaaatg 18997669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 222
Target Start/End: Original strand, 20126193 - 20126415
Alignment:
Q  4 tttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatgtgattgtttgaaatcgtgacaaaaacaaagacaatcc 103  Q
    ||||| ||||||| ||||||| ||||||  || |||||| ||||| |  ||||| |||||||| | ||||  | |||| ||   |||||||||||| |||    
T  20126193 tttaaagaattgattccaagaatcttcatatccaaattctttcattttacatattacaaaatgagtttgtacgtaatcatggggaaaacaaagacagtcc 20126292  T
Q  104 tttaacacacttagatttggtataacaaatg----gcatttcttggaaacctcgaggagggagtaactcagaatgcgtctcggtgcccaaattaagtgaa 199  Q
    ||||||||||||| |||||||| |||||  |    | | |||   ||||||| |||| || || | || |||||| ||||| |||||||| | ||| |||    
T  20126293 tttaacacacttatatttggtacaacaatcgctacgtacttcagtgaaaccttgaggtggcagaagctgagaatgtgtctcagtgcccaagtcaagggaa 20126392  T
Q  200 ataatcacaaattgctcaatagt 222  Q
    |||||||||||||||| ||||||    
T  20126393 ataatcacaaattgctgaatagt 20126415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 131
Target Start/End: Original strand, 20133340 - 20133453
Alignment:
Q  18 tccaagactcttcaactcgaaattccttcatctgccatataacaaaatgtgattgtttgaaatcgtgacaaaaacaaagacaatcctttaacacacttag 117  Q
    ||||||| |||||||||| |||||| ||||| |||||||  || ||||| | ||||||| |||| ||  ||||||| |  ||||||||||||| ||||||    
T  20133340 tccaagaatcttcaactccaaattctttcatttgccatactaccaaatgagtttgtttgtaatcatgtgaaaaacacatgcaatcctttaacaaacttag 20133439  T
Q  118 atttggtataacaa 131  Q
    || ||||| |||||    
T  20133440 atatggtacaacaa 20133453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 223
Target Start/End: Original strand, 20140841 - 20141046
Alignment:
Q  18 tccaagactcttcaactcgaaattccttcatctgccatataacaaaatgtgattgtttgaaatcgtgacaaaaacaaagacaatcctttaacacacttag 117  Q
    ||||||| | |||||||| |||||||||||| |||||||  || ||||| | ||||||| |||| |   |||||||||||   |||||||||| ||||||    
T  20140841 tccaagaattttcaactccaaattccttcatttgccatactaccaaatgagtttgtttgtaatcatatgaaaaacaaagattgtcctttaacaaacttag 20140940  T
Q  118 atttggtataacaaatggcatttcttggaaacctcgaggagggagtaactcagaatgcgtctcggtgcccaaattaagtgaaataatcacaaattgctca 217  Q
    || ||||| || ||  || | ||||  |||||||  ||||||    |  | |||||| |||||||||||||||| ||| |||| |||||||||||| |||    
T  20140941 atatggtacaaaaatcgggacttctctgaaacctataggaggcgaaagttgagaatgtgtctcggtgcccaaataaagagaaacaatcacaaattggtca 20141040  T
Q  218 atagta 223  Q
    | ||||    
T  20141041 agagta 20141046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 65
Target Start/End: Complemental strand, 36263114 - 36263053
Alignment:
Q  4 tttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaat 65  Q
    ||||| || ||||||||||||||||||||||| |||||| | ||||| ||||||||||||||    
T  36263114 tttaatgagttgagtccaagactcttcaactccaaattcttccatcttccatataacaaaat 36263053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 22021455 - 22021391
Alignment:
Q  2 attttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatg 66  Q
    |||||||| |||||||||||||| |||||||||| | | ||| |||||||||||||||| |||||    
T  22021455 attttaagtaattgagtccaagattcttcaactccataatccatcatctgccatataaccaaatg 22021391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 29106866 - 29106814
Alignment:
Q  13 ttgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaat 65  Q
    ||||||||||||||||||||| | ||||| |||||||||||||| ||||||||    
T  29106866 ttgagtccaagactcttcaaccccaaatttcttcatctgccatacaacaaaat 29106814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 29921999 - 29922063
Alignment:
Q  1 aattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaat 65  Q
    |||| |||||||||||| |||||| |||||| | | ||||| |||||||||||||||||||||||    
T  29921999 aattctaaggaattgagaccaagaatcttcatccccaaatttcttcatctgccatataacaaaat 29922063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 15571901 - 15572012
Alignment:
Q  1 aattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatgtgattgtttgaaatcgtgacaaaaacaaagacaa 100  Q
    ||||||| ||||||||  ||||||||||||||||| ||| ||| |||| ||||| || |||||||| | |   |||||||| | | ||||||||||||||    
T  15571901 aattttatggaattgaacccaagactcttcaactccaaactccctcatttgccacatgacaaaatgggttcccttgaaatcataagaaaaacaaagacaa 15572000  T
Q  101 tcctttaacaca 112  Q
    ||| | ||||||    
T  15572001 tccataaacaca 15572012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 176 - 223
Target Start/End: Original strand, 16839562 - 16839609
Alignment:
Q  176 gtctcggtgcccaaattaagtgaaataatcacaaattgctcaatagta 223  Q
    ||||| |||||||||| |||||||||||||||||||||||||| ||||    
T  16839562 gtctccgtgcccaaatcaagtgaaataatcacaaattgctcaacagta 16839609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 65
Target Start/End: Complemental strand, 19722081 - 19722018
Alignment:
Q  2 attttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaat 65  Q
    ||||| ||||||||||||||||| |||| ||||| ||||||| |||||| ||||| ||||||||    
T  19722081 attttgaggaattgagtccaagaatcttgaactccaaattccatcatcttccataaaacaaaat 19722018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 65
Target Start/End: Original strand, 29445663 - 29445726
Alignment:
Q  2 attttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaat 65  Q
    ||||| || |||||||||||||| |||||||| |  |||||||||||||||||||||| |||||    
T  29445663 atttttagaaattgagtccaagagtcttcaacccctaattccttcatctgccatataagaaaat 29445726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 19357974 - 19357872
Alignment:
Q  1 aattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatgtgattgtttgaaatcgtgacaaaaacaaagacaa 100  Q
    |||||| | |||||||||||||||||||| ||||| ||||||| |||||| ||||| ||| ||||| |    |||||||| |||| ||||||| |||| |    
T  19357974 aatttttaagaattgagtccaagactcttgaactccaaattccatcatcttccataaaacgaaatgggtccctttgaaatagtgagaaaaacatagacta 19357875  T
Q  101 tcc 103  Q
    |||    
T  19357874 tcc 19357872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 26256829 - 26256775
Alignment:
Q  11 aattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaat 65  Q
    ||||||||||||||||||| ||||| | | |||||||||||||||| ||||||||    
T  26256829 aattgagtccaagactcttgaactccatactccttcatctgccataaaacaaaat 26256775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 1985961 - 1986026
Alignment:
Q  1 aattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatg 66  Q
    ||||||||  |||||||||||||| |||||||| | |||||||||||| ||||| | |||||||||    
T  1985961 aattttaaacaattgagtccaagattcttcaacgccaaattccttcatttgccaaagaacaaaatg 1986026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 13416917 - 13417018
Alignment:
Q  1 aattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatgtgattgtttgaaatcgtgacaaaaacaaagacaa 100  Q
    |||||||| ||||| |  ||||||||||||||||| |||||||||||| |||||||| | |||||  | ||  || ||||| | | ||||||||||||||    
T  13416917 aattttaacgaattcaacccaagactcttcaactccaaattccttcatttgccatatgataaaataggttttcttaaaatcataagaaaaacaaagacaa 13417016  T
Q  101 tc 102  Q
    ||    
T  13417017 tc 13417018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 20058063 - 20058128
Alignment:
Q  1 aattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatg 66  Q
    ||||||||| ||||||  |||||||||||||||||  ||||||| ||| | |||||||||||||||    
T  20058063 aattttaagaaattgacaccaagactcttcaactctgaattcctccattttccatataacaaaatg 20058128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 66
Target Start/End: Complemental strand, 22028688 - 22028627
Alignment:
Q  5 ttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatg 66  Q
    ||||| ||||||||||||||||||||||||| | | ||| |||| | |||||||||||||||    
T  22028688 ttaagtaattgagtccaagactcttcaactccataatccgtcattttccatataacaaaatg 22028627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 15444018 - 15443966
Alignment:
Q  11 aattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaa 63  Q
    ||||||||||||||||||||||||| | | |||||||| ||||||| ||||||    
T  15444018 aattgagtccaagactcttcaactccatactccttcatatgccataaaacaaa 15443966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 19597661 - 19597717
Alignment:
Q  1 aattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatat 57  Q
    |||||| || || |||||||| ||||||||||||  |||||||||||||||||||||    
T  19597661 aattttgagaaactgagtccatgactcttcaacttcaaattccttcatctgccatat 19597717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 19645636 - 19645692
Alignment:
Q  1 aattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatat 57  Q
    ||||||||| ||  ||||||| |||||||||| || |||||||||||||||||||||    
T  19645636 aattttaagtaacagagtccatgactcttcaattccaaattccttcatctgccatat 19645692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 29867300 - 29867236
Alignment:
Q  1 aattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaat 65  Q
    |||| ||||||||||||||||||| |||||||| |  |||| |||||| |||||||||| |||||    
T  29867300 aattctaaggaattgagtccaagaatcttcaaccccgaatttcttcatttgccatataataaaat 29867236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 36260305 - 36260253
Alignment:
Q  13 ttgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaat 65  Q
    |||| |||||||||||||||||| |||||| | ||||| ||||||||||||||    
T  36260305 ttgaatccaagactcttcaactccaaattcttccatcttccatataacaaaat 36260253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 256 - 303
Target Start/End: Original strand, 6865064 - 6865111
Alignment:
Q  256 gtaattgcgaattgccaaccaattaaaactaccactaagatgaacaac 303  Q
    |||||||||||||||||||||| ||| |||||||| |||||| |||||    
T  6865064 gtaattgcgaattgccaaccaagtaacactaccaccaagatgcacaac 6865111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 176 - 223
Target Start/End: Original strand, 16846645 - 16846692
Alignment:
Q  176 gtctcggtgcccaaattaagtgaaataatcacaaattgctcaatagta 223  Q
    ||||| |||||||||| ||| |||||||||||||||||||||| ||||    
T  16846645 gtctccgtgcccaaatcaagagaaataatcacaaattgctcaacagta 16846692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 95
Target Start/End: Original strand, 21218721 - 21218808
Alignment:
Q  8 aggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatgtgattgtttgaaatcgtgacaaaaacaaa 95  Q
    |||||||||||||||||||  ||| ||| ||||||| |||| ||||||||||| ||||  | |   |||||||||||| |||||||||    
T  21218721 aggaattgagtccaagacttatcatctccaaattccgtcatttgccatataaccaaatcagttccattgaaatcgtgataaaaacaaa 21218808  T

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Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 218
Target Start/End: Complemental strand, 18326110 - 18326068
Alignment:
Q  176 gtctcggtgcccaaattaagtgaaataatcacaaattgctcaa 218  Q
    ||||| |||||||||| ||||||||||||| ||||||||||||    
T  18326110 gtctccgtgcccaaatcaagtgaaataatcgcaaattgctcaa 18326068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 18514793 - 18514851
Alignment:
Q  1 aattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataa 59  Q
    |||||||||||||||||||||||| | |||||||| |||||| | ||| | ||||||||    
T  18514793 aattttaaggaattgagtccaagagttttcaactccaaattcgtccattttccatataa 18514851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 65
Target Start/End: Complemental strand, 20414943 - 20414882
Alignment:
Q  4 tttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaat 65  Q
    |||||||||||||||||||||||  ||| ||| ||||| | |||||| |||||||| |||||    
T  20414943 tttaaggaattgagtccaagacttgtcatctccaaatttcatcatcttccatataataaaat 20414882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 64
Target Start/End: Complemental strand, 26218021 - 26217968
Alignment:
Q  11 aattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaa 64  Q
    ||||||| ||||||||||| ||||| | | |||||||||||||||| |||||||    
T  26218021 aattgagaccaagactcttgaactccatactccttcatctgccataaaacaaaa 26217968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 29881320 - 29881267
Alignment:
Q  1 aattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgcca 54  Q
    |||| ||||||||||||||||||| |||||||| | ||||| |||||| |||||    
T  29881320 aattctaaggaattgagtccaagaatcttcaaccccaaatttcttcatttgcca 29881267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 65
Target Start/End: Original strand, 35205933 - 35205994
Alignment:
Q  4 tttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaat 65  Q
    |||||||||||||||||||||||  |||  || ||||||  |||||| ||||||||||||||    
T  35205933 tttaaggaattgagtccaagacttgtcatttccaaattctgtcatcttccatataacaaaat 35205994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 66
Target Start/End: Original strand, 19326000 - 19326056
Alignment:
Q  10 gaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatg 66  Q
    ||||||||||||||| | ||| |||| |||||||  ||| |||||||||||||||||    
T  19326000 gaattgagtccaagattgttctactccaaattccgacatatgccatataacaaaatg 19326056  T

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Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 19637223 - 19637287
Alignment:
Q  1 aattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaat 65  Q
    |||||||||||   || |||| ||||||| ||||| |||||||||||| |||||||||| |||||    
T  19637223 aattttaaggagccgaatccacgactcttgaactccaaattccttcatttgccatataataaaat 19637287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 29431007 - 29431071
Alignment:
Q  1 aattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaat 65  Q
    ||||||||||||||| |||||||| |||| | | | ||||| | ||||| |||||||||||||||    
T  29431007 aattttaaggaattgggtccaagaatctttagccccaaatttcatcatccgccatataacaaaat 29431071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 79; Significance: 7e-37; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 11970988 - 11971202
Alignment:
Q  1 aattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatgtgattgtttgaaatcgtgacaaaaacaaagacaa 100  Q
    |||| |||| |||||||||||||||||||| |||| |||||||||||| ||||||||||||||||| | |||||  ||||| ||| ||||||||||||||    
T  11970988 aattctaagaaattgagtccaagactcttccactccaaattccttcatttgccatataacaaaatgagtttgttcaaaatcatgagaaaaacaaagacaa 11971087  T
Q  101 tcctttaacacacttagatttggtataacaaatggcatttcttggaaacctcgaggagggagtaactcagaatgcgtctcggtgcccaaattaagtgaaa 200  Q
    |||| |||||| ||||||||||| |||| ||||||||  |  |  || ||| |||||||  | |||| || ||   |||| ||||| |||| ||||||||    
T  11971088 tcctctaacacgcttagatttggcataagaaatggcacctgatcaaatccttgaggaggtcgcaactgagtatatttctcagtgccaaaatcaagtgaaa 11971187  T
Q  201 taatcacaaattgct 215  Q
    |||||||||||||||    
T  11971188 taatcacaaattgct 11971202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 11981689 - 11981825
Alignment:
Q  1 aattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatgtgattgtttgaaatcgtgacaaaaacaaagacaa 100  Q
    ||||||||| ||| ||||||| |||||||| |||| |||||||||||| ||||||||||||||||| | |||||  ||||| ||| ||||||||||||||    
T  11981689 aattttaagaaatcgagtccaggactcttccactccaaattccttcatttgccatataacaaaatgagtttgttgaaaatcatgagaaaaacaaagacaa 11981788  T
Q  101 tcctttaacacacttagatttggtataacaaatggca 137  Q
    |||| ||||||||||| |||||| | || ||||||||    
T  11981789 tcctgtaacacacttacatttggcacaagaaatggca 11981825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 53774904 - 53774802
Alignment:
Q  1 aattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatgtgattgtttgaaatcgtgacaaaaacaaagacaa 100  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| | || ||| ||||| | | ||||||||| ||||    
T  53774904 aattttaaggaattgagtccaagactcttcaactccaaattccttcatttgccatataacaaaatgagtttctttaaaatcataagaaaaacaaatacaa 53774805  T
Q  101 tcc 103  Q
    |||    
T  53774804 tcc 53774802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 3565808 - 3565744
Alignment:
Q  1 aattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaat 65  Q
    ||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||| |||||    
T  3565808 aattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataataaaat 3565744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 3557790 - 3557726
Alignment:
Q  1 aattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaat 65  Q
    ||||||||| ||||||||||||||||||||||| | |||||||||||| |||||||||| |||||    
T  3557790 aattttaagaaattgagtccaagactcttcaaccccaaattccttcatatgccatataataaaat 3557726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 35767082 - 35767017
Alignment:
Q  1 aattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatg 66  Q
    ||||||||||| |||| |||||||||||||||||| |||||| | ||||| |||||||||||||||    
T  35767082 aattttaaggagttgaatccaagactcttcaactccaaattcttccatcttccatataacaaaatg 35767017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 59
Target Start/End: Original strand, 1686294 - 1686349
Alignment:
Q  4 tttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataa 59  Q
    |||||| ||||||||||||||||| ||||| | |||||||||||||||||||||||    
T  1686294 tttaagaaattgagtccaagactcgtcaacgccaaattccttcatctgccatataa 1686349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 3560964 - 3561028
Alignment:
Q  1 aattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaat 65  Q
    ||||||||| ||||||||||||||||||||||| | |||||  ||||||||||| |||| |||||    
T  3560964 aattttaagaaattgagtccaagactcttcaaccccaaattttttcatctgccaaataataaaat 3561028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 103
Target Start/End: Complemental strand, 10464323 - 10464231
Alignment:
Q  11 aattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatgtgattgtttgaaatcgtgacaaaaacaaagacaatcc 103  Q
    |||||| |||||||||| | | | | ||| |||||||| ||||||||||||||||| |  | || |||||| | |||||||||||||||||||    
T  10464323 aattgaatccaagactcctgatccccaaaatccttcatttgccatataacaaaatgggtattttggaaatcataacaaaaacaaagacaatcc 10464231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 53430105 - 53430169
Alignment:
Q  1 aattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaat 65  Q
    |||||||||||||||||||||||| |||||  | | | ||| ||||||||||||||| |||||||    
T  53430105 aattttaaggaattgagtccaagaatcttcggccccatatttcttcatctgccatatgacaaaat 53430169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 8443460 - 8443558
Alignment:
Q  1 aattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatgtgattgtttgaaatcgtgacaaaaacaaagaca 99  Q
    ||||||||  |||||| |||||||||| | ||||| ||| |||||||||||||| |||||| |||| | |   |||||||| | | |||||||||||||    
T  8443460 aattttaaataattgaatccaagactcgtgaactccaaaatccttcatctgccaaataacataatgagttctcttgaaatcataagaaaaacaaagaca 8443558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 103
Target Start/End: Complemental strand, 10475231 - 10475169
Alignment:
Q  41 tccttcatctgccatataacaaaatgtgattgtttgaaatcgtgacaaaaacaaagacaatcc 103  Q
    |||||||| ||||||||||||||||| |  | || |||||| | |||||||||||||||||||    
T  10475231 tccttcatttgccatataacaaaatgggtattttggaaatcataacaaaaacaaagacaatcc 10475169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 837840 - 837775
Alignment:
Q  1 aattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatg 66  Q
    ||||||||  |||||| |||||||||||| ||| | ||| | |||||| |||||||||||||||||    
T  837840 aattttaaataattgaatccaagactcttgaacaccaaaattcttcatttgccatataacaaaatg 837775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 19361506 - 19361442
Alignment:
Q  1 aattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaat 65  Q
    |||||||| || |||||||||| |||||||||||  |||||  | ||||| ||||||||||||||    
T  19361506 aattttaatgagttgagtccaaaactcttcaacttcaaattattccatcttccatataacaaaat 19361442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 78; Significance: 3e-36; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 4 - 221
Target Start/End: Complemental strand, 15961289 - 15961072
Alignment:
Q  4 tttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatgtgattgtttgaaatcgtgacaaaaacaaagacaatcc 103  Q
    ||||| ||||||||||||||| |||||| ||| ||||| |||||| | ||||||||| | ||||| ||||||||| || ||| |||||||||||||||      
T  15961289 tttaaagaattgagtccaagattcttcagctccaaatttcttcattttccatataaccatatgtgtttgtttgaagtcatgagaaaaacaaagacaatta 15961190  T
Q  104 tttaacacacttagatttggtataacaaatggcatttcttggaaacctcgaggagggagtaactcagaatgcgtctcggtgcccaaattaagtgaaataa 203  Q
    ||||||||||||||||||||| ||||| |||| | ||| | |||||||  ||||||    |||| || ||| ||||| |||||||||| |||||||| ||    
T  15961189 tttaacacacttagatttggtttaacatatggaacttcattgaaacctttaggaggtgccaactgagtatgtgtctcagtgcccaaatcaagtgaaacaa 15961090  T
Q  204 tcacaaattgctcaatag 221  Q
    ||||||| || |||||||    
T  15961089 tcacaaaatgttcaatag 15961072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 65
Target Start/End: Original strand, 39379068 - 39379131
Alignment:
Q  2 attttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaat 65  Q
    |||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||| |||||    
T  39379068 attttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataataaaat 39379131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 4014974 - 4015032
Alignment:
Q  4 tttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaa 62  Q
    ||||||||||||||||||||| |||||||| | ||||| ||||||||||||||||||||    
T  4014974 tttaaggaattgagtccaagaatcttcaaccccaaatttcttcatctgccatataacaa 4015032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 4 - 65
Target Start/End: Original strand, 21855392 - 21855453
Alignment:
Q  4 tttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaat 65  Q
    |||||||| |||||||||||| |||||||| | |||||||||||||| ||||||||||||||    
T  21855392 tttaaggagttgagtccaagaatcttcaaccccaaattccttcatctcccatataacaaaat 21855453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 4570991 - 4570927
Alignment:
Q  1 aattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaat 65  Q
    ||||||||| |||||||||||||| |||||||| | ||||| |||||| ||||||||||||||||    
T  4570991 aattttaagcaattgagtccaagaatcttcaaccccaaatttcttcatttgccatataacaaaat 4570927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 65
Target Start/End: Original strand, 4366504 - 4366565
Alignment:
Q  4 tttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaat 65  Q
    |||||| ||| ||||||||||||||||||| |  |||| |||||||||||||| ||||||||    
T  4366504 tttaagaaatggagtccaagactcttcaaccccgaatttcttcatctgccataaaacaaaat 4366565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 50645491 - 50645556
Alignment:
Q  1 aattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatg 66  Q
    ||||||||  |||||| |||||||||||| ||||| ||| |||||||| ||||| |||||||||||    
T  50645491 aattttaaataattgaatccaagactcttgaactccaaaatccttcatttgccacataacaaaatg 50645556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 10219049 - 10218985
Alignment:
Q  1 aattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaat 65  Q
    ||||||||| |||||||||||||| |||||||  | ||||| |||||| ||||||| ||||||||    
T  10219049 aattttaagtaattgagtccaagaatcttcaatcccaaatttcttcatttgccatacaacaaaat 10218985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 17560779 - 17560843
Alignment:
Q  1 aattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaat 65  Q
    |||| |||||||| | |||||||| |||||||| | ||||| |||||| ||||||||||| ||||    
T  17560779 aattataaggaatggtgtccaagaatcttcaaccccaaatttcttcatgtgccatataaccaaat 17560843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0867 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0867
Description:

Target: scaffold0867; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 14 - 159
Target Start/End: Original strand, 4688 - 4833
Alignment:
Q  14 tgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatgtgattgtttgaaatcgtgacaaaaacaaagacaatcctttaacacac 113  Q
    |||||||||||||||| ||||| ||||| |||||| |||||||||| |||||| | || ||||||||| ||| ||||||||||| |||| ||||| ||||    
T  4688 tgagtccaagactcttgaactccaaatttcttcatttgccatataataaaatgagtttttttgaaatcatgagaaaaacaaagataatcatttaagacac 4787  T
Q  114 ttagatttggtataacaaatggcatttcttggaaacctcgaggagg 159  Q
    ||||||| |||||||||| ||||| ||| | ||||||  |||||||    
T  4788 ttagattaggtataacaattggcacttcattgaaaccatgaggagg 4833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 1e-19; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 6921356 - 6921421
Alignment:
Q  1 aattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatg 66  Q
    |||||||||||||||||||||||| |||||||||| |||||||||||| ||||| |||||||||||    
T  6921356 aattttaaggaattgagtccaagattcttcaactccaaattccttcatttgccagataacaaaatg 6921421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 20770714 - 20770602
Alignment:
Q  1 aattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatgtgattgtttgaaatcgtgacaaaaacaaagacaa 100  Q
    |||||||||||||||| |||| |||||||||| || |||||||||||| ||||||||||||||||  | || ||| | ||| ||| ||||||||| ||||    
T  20770714 aattttaaggaattgaatccatgactcttcaattccaaattccttcatttgccatataacaaaataagtttttttaacatcatgagaaaaacaaatacaa 20770615  T
Q  101 tcctttaacacac 113  Q
    ||| | |||||||    
T  20770614 tccatcaacacac 20770602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 6947886 - 6947997
Alignment:
Q  1 aattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatgtgattgtttgaaatcgtgacaaaaacaaagacaa 100  Q
    |||||||||||||||||||||||| |||||||||| |||||||||||| ||||| | |||||| || | ||  |||||||| ||  |||||||||| |||    
T  6947886 aattttaaggaattgagtccaagattcttcaactccaaattccttcatttgccaaagaacaaagtgggttttcttgaaatcatgtgaaaaacaaaggcaa 6947985  T
Q  101 tcctttaacaca 112  Q
    ||| | ||||||    
T  6947986 tccatcaacaca 6947997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 14749461 - 14749359
Alignment:
Q  1 aattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatgtgattgtttgaaatcgtgacaaaaacaaagacaa 100  Q
    |||||| |||||||||||||||||||||| ||||| ||||||| |||||  ||||| ||||||||| |  | |||||||  |||| ||||||| ||||||    
T  14749461 aattttgaggaattgagtccaagactcttgaactccaaattccatcatcctccataaaacaaaatgggtctctttgaaacggtgagaaaaacatagacaa 14749362  T
Q  101 tcc 103  Q
    |||    
T  14749361 tcc 14749359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 6954525 - 6954590
Alignment:
Q  1 aattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatg 66  Q
    ||||||||  |||||||||||||| |||||||||| |||||||||||| ||||| |||||||||||    
T  6954525 aattttaatcaattgagtccaagattcttcaactccaaattccttcatttgccaaataacaaaatg 6954590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 6935224 - 6935289
Alignment:
Q  1 aattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatg 66  Q
    |||||||||||||| ||||||||| |||| ||||| |||||||||||| ||||| |||||| ||||    
T  6935224 aattttaaggaatttagtccaagattcttgaactccaaattccttcatttgccaaataacataatg 6935289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 17369728 - 17369675
Alignment:
Q  1 aattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgcca 54  Q
    ||||||||| |||||||||||||| |||||||||| |||||||||||| |||||    
T  17369728 aattttaagaaattgagtccaagagtcttcaactccaaattccttcatttgcca 17369675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 6942973 - 6943037
Alignment:
Q  1 aattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaat 65  Q
    ||||||||||||||| ||| |||| |||||||||| |||||||||||| ||| | ||||||||||    
T  6942973 aattttaaggaattgcgtctaagattcttcaactccaaattccttcatttgctaaataacaaaat 6943037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 24950150 - 24950214
Alignment:
Q  1 aattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaat 65  Q
    |||||||||||||||| |||||||||| ||||||| ||| | | |||||| ||||||||||||||    
T  24950150 aattttaaggaattgactccaagactcctcaactccaaacttcatcatcttccatataacaaaat 24950214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 66
Target Start/End: Original strand, 24254441 - 24254497
Alignment:
Q  10 gaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatg 66  Q
    ||||||||||||||| | ||| |||| |||||||  |||||||||||||||||||||    
T  24254441 gaattgagtccaagattgttcgactccaaattccgacatctgccatataacaaaatg 24254497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 5979078 - 5979029
Alignment:
Q  14 tgagtccaagactcttcaactcgaaattccttcatctgccatataacaaa 63  Q
    ||||||||||||||||  |||| ||| ||||||||| |||||||||||||    
T  5979078 tgagtccaagactcttggactccaaactccttcatcagccatataacaaa 5979029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 33576221 - 33576172
Alignment:
Q  14 tgagtccaagactcttcaactcgaaattccttcatctgccatataacaaa 63  Q
    |||||||||||||||| ||||| ||| |||||||||  ||||||||||||    
T  33576221 tgagtccaagactcttgaactccaaactccttcatcatccatataacaaa 33576172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 1e-19; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 18908815 - 18908928
Alignment:
Q  1 aattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatgtgattgtttgaaatcgtgacaaaaacaaagacaa 100  Q
    |||||| |||||||||||||||||||||| ||||| ||||||| |||||| ||||||||||||||| | || | | |||  |||| ||||||| ||||||    
T  18908815 aattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaatgggtttctctaaaacggtgagaaaaacatagacaa 18908914  T
Q  101 tcctttaacacact 114  Q
    ||| | ||||||||    
T  18908915 tccatcaacacact 18908928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 18913563 - 18913628
Alignment:
Q  1 aattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatg 66  Q
    |||||| |||||||||||||||||||||| ||||| ||||||| |||||| |||||||||||||||    
T  18913563 aattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaatg 18913628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 18920771 - 18920836
Alignment:
Q  1 aattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatg 66  Q
    |||||| |||||||||||||||||||||| ||||| ||||||| |||||| |||||||||||||||    
T  18920771 aattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaatg 18920836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 554540 - 554428
Alignment:
Q  1 aattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatgtgattgtttgaaatcgtgacaaaaacaaagacaa 100  Q
    ||||||||| ||||||||||||||||||| ||||| | ||||  |||| |||||||||| || ||| | |   |  ||||||||| ||||||||||||||    
T  554540 aattttaagtaattgagtccaagactctttaactccatattctatcatttgccatataataagatgggttccctcaaaatcgtgagaaaaacaaagacaa 554441  T
Q  101 tcctttaacacac 113  Q
    | |||||||||||    
T  554440 ttctttaacacac 554428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 14514964 - 14514903
Alignment:
Q  1 aattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaa 62  Q
    |||||||||||||||||||||||| |||||||||| |||||| | ||| | |||||||||||    
T  14514964 aattttaaggaattgagtccaagaatcttcaactccaaattcatccattttccatataacaa 14514903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 20699461 - 20699510
Alignment:
Q  16 agtccaagactcttcaactcgaaattccttcatctgccatataacaaaat 65  Q
    |||||||||| ||||||||||||||||  |||||||||||||||||||||    
T  20699461 agtccaagacgcttcaactcgaaattctctcatctgccatataacaaaat 20699510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 66
Target Start/End: Complemental strand, 20975612 - 20975557
Alignment:
Q  11 aattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatg 66  Q
    |||||| ||||||| |||||||||| ||||||| |||| |||||||||||||||||    
T  20975612 aattgaatccaagaatcttcaactccaaattccctcatttgccatataacaaaatg 20975557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 25377138 - 25377040
Alignment:
Q  1 aattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatgtgattgtttgaaatcgtgacaaaaacaaagaca 99  Q
    ||||||||  |||||| |||||||||||| ||||| ||| |||||||||  |||||||||||||||   ||  |  ||||| |||||||||||||||||    
T  25377138 aattttaaataattgaatccaagactcttgaactccaaaatccttcatcatccatataacaaaatggttttcctccaaatcatgacaaaaacaaagaca 25377040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 65
Target Start/End: Complemental strand, 20980665 - 20980604
Alignment:
Q  4 tttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaat 65  Q
    ||||||||| | |||||||||||||||||||| ||||||  |||| | ||||||||||||||    
T  20980665 tttaaggaacttagtccaagactcttcaactctaaattctgtcattttccatataacaaaat 20980604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 21021279 - 21021332
Alignment:
Q  5 ttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatata 58  Q
    ||||| |||| |||||| |||| |||||||| ||||||||||||||||||||||    
T  21021279 ttaagcaatttagtccatgacttttcaactctaaattccttcatctgccatata 21021332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 112
Target Start/End: Complemental strand, 1826395 - 1826329
Alignment:
Q  45 tcatctgccatataacaaaatgtgattgtttgaaatcgtgacaaaaacaaagacaatcctttaacaca 112  Q
    |||||||||||||||||||||| | || ||||||||| ||| ||||||||||||| ||| | ||||||    
T  1826395 tcatctgccatataacaaaatg-ggttatttgaaatcatgagaaaaacaaagacagtccatcaacaca 1826329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 65
Target Start/End: Original strand, 20712556 - 20712603
Alignment:
Q  18 tccaagactcttcaactcgaaattccttcatctgccatataacaaaat 65  Q
    |||||||||||||||||  ||||||| |||||| ||||||||||||||    
T  20712556 tccaagactcttcaactgcaaattccctcatcttccatataacaaaat 20712603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 25698561 - 25698507
Alignment:
Q  11 aattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaat 65  Q
    |||| ||||||||| |||||||||| ||||||  |||| ||||||||||||||||    
T  25698561 aatttagtccaagagtcttcaactccaaattctctcatttgccatataacaaaat 25698507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 20967749 - 20967700
Alignment:
Q  16 agtccaagactcttcaactcgaaattccttcatctgccatataacaaaat 65  Q
    |||||||||||||||| ||| ||||| | |||| ||||||||||||||||    
T  20967749 agtccaagactcttcagctctaaatttcgtcatttgccatataacaaaat 20967700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 2e-18; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 29597558 - 29597653
Alignment:
Q  1 aattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatgtgattgtttgaaatcgtgacaaaaacaaag 96  Q
    |||||||||||||||||||||||| | |||||||| ||||||  |||| ||||||||||||||||| | ||  ||||||| |||| ||||||||||    
T  29597558 aattttaaggaattgagtccaagattgttcaactccaaattcaatcatttgccatataacaaaatgagtttccttgaaatggtgagaaaaacaaag 29597653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 18964836 - 18964894
Alignment:
Q  1 aattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataa 59  Q
    ||||||||| |||||||||||||| |||||||||| |||||||||||| ||||||||||    
T  18964836 aattttaagaaattgagtccaagagtcttcaactccaaattccttcatttgccatataa 18964894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 4 - 65
Target Start/End: Original strand, 24330908 - 24330969
Alignment:
Q  4 tttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaat 65  Q
    |||||||| |||||||||||| |||||||| | |||||||||||||| ||||||||||||||    
T  24330908 tttaaggagttgagtccaagaatcttcaaccccaaattccttcatctcccatataacaaaat 24330969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 29647740 - 29647638
Alignment:
Q  1 aattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatgtgattgtttgaaatcgtgacaaaaacaaagacaa 100  Q
    |||||||||||||||||||||||| | ||||| || ||||||  |||| ||||||||||||||||| | ||  || | || |||| |||||||||| |||    
T  29647740 aattttaaggaattgagtccaagattgttcaaatccaaattctatcatttgccatataacaaaatgagttttcttaagatggtgagaaaaacaaaggcaa 29647641  T
Q  101 tcc 103  Q
    |||    
T  29647640 tcc 29647638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 23086833 - 23086784
Alignment:
Q  14 tgagtccaagactcttcaactcgaaattccttcatctgccatataacaaa 63  Q
    |||||||||||||||| ||||| ||| |||||||||||||||||||||||    
T  23086833 tgagtccaagactcttgaactccaaactccttcatctgccatataacaaa 23086784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 29642423 - 29642358
Alignment:
Q  1 aattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatg 66  Q
    |||||||||||||||||||||||| | ||||| || ||||||  |||| ||||||||||| |||||    
T  29642423 aattttaaggaattgagtccaagattgttcaaatccaaattctatcatttgccatataacgaaatg 29642358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 28763912 - 28763976
Alignment:
Q  2 attttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatg 66  Q
    ||||| |||||| || ||||||||| |||||||| ||||| | |||||| |||||||||||||||    
T  28763912 attttgaggaatcgactccaagacttttcaactccaaattgcgtcatcttccatataacaaaatg 28763976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 99
Target Start/End: Complemental strand, 27618552 - 27618457
Alignment:
Q  4 tttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatgtgattgtttgaaatcgtgacaaaaacaaagaca 99  Q
    |||||| || ||||||||||||||||||||||  | ||| | ||| | ||||||||||||||| | ||| || ||||| |||||||||||||||||    
T  27618552 tttaagcaactgagtccaagactcttcaactccgagttcttccattttccatataacaaaatgagtttgcttaaaatcatgacaaaaacaaagaca 27618457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 29390340 - 29390288
Alignment:
Q  11 aattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaa 63  Q
    |||| ||| ||||| |||||||||| ||||||| |||||||||||||||||||    
T  29390340 aatttagttcaagattcttcaactccaaattccctcatctgccatataacaaa 29390288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 3625798 - 3625740
Alignment:
Q  1 aattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataa 59  Q
    ||||||||| ||||||||||||||||||||||| | ||||| |||||| ||||||||||    
T  3625798 aattttaagaaattgagtccaagactcttcaaccccaaatttcttcatttgccatataa 3625740  T

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Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 66
Target Start/End: Original strand, 25901295 - 25901350
Alignment:
Q  11 aattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatg 66  Q
    |||||| |||||||||||| ||||||||| |||||||| | |||||||||||||||    
T  25901295 aattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaatg 25901350  T

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Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 66
Target Start/End: Original strand, 25915313 - 25915368
Alignment:
Q  11 aattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaatg 66  Q
    |||||| |||||||||||| ||||||||| |||||||| | |||||||||||||||    
T  25915313 aattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaatg 25915368  T

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Target: scaffold0649 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0649
Description:

Target: scaffold0649; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 5487 - 5438
Alignment:
Q  16 agtccaagactcttcaactcgaaattccttcatctgccatataacaaaat 65  Q
    |||||||||||||||||||| |||||  ||||||||||||||||||||||    
T  5487 agtccaagactcttcaactctaaattttttcatctgccatataacaaaat 5438  T

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Target: scaffold0354 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0354
Description:

Target: scaffold0354; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 7527 - 7471
Alignment:
Q  1 aattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatat 57  Q
    ||||||||||||||||  ||||||||| ||||||| |||||||||||| ||||||||    
T  7527 aattttaaggaattgaacccaagactcatcaactccaaattccttcatttgccatat 7471  T

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Target: scaffold0097 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 65
Target Start/End: Original strand, 16395 - 16442
Alignment:
Q  18 tccaagactcttcaactcgaaattccttcatctgccatataacaaaat 65  Q
    |||||||||||||||||  ||||||| |||||| ||||||||||||||    
T  16395 tccaagactcttcaactgcaaattccctcatcttccatataacaaaat 16442  T

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Target: scaffold0064 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 64
Target Start/End: Complemental strand, 24266 - 24206
Alignment:
Q  4 tttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaa 64  Q
    ||||||||||||||| ||||||| |||| ||| | ||||  |||||| |||||||||||||    
T  24266 tttaaggaattgagttcaagacttttcatctccatattctgtcatcttccatataacaaaa 24206  T

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