View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17721_low_33 (Length: 254)
Name: NF17721_low_33
Description: NF17721
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17721_low_33 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 11 - 254
Target Start/End: Original strand, 45714035 - 45714283
Alignment:
| Q |
11 |
gaagcataggaaaacccaaatacttttcgagagaagtaatgctttgaataccggatatgttagatgcgtttagaattagggaaatagattctctacat-- |
108 |
Q |
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| T |
45714035 |
gaagcataggaaaacccaaatacttttcgagagaagtaatgctttgaataccggatatgtgagatgcgtttagaattagggaaatagattctctacatta |
45714134 |
T |
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| Q |
109 |
---agaaatctaacaaatcctcaacccttcaaaataaatgatacaaattatttaatattaaaaacaagagggaatacatttaatgatatagattttcaca |
205 |
Q |
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| T |
45714135 |
aagagaaatctaacaaatcctcaacccttcaaaataaatgatacaaattatttaatattaaaaacaagagagaatacatttaatgatatagattttcaca |
45714234 |
T |
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| Q |
206 |
tgtaagtgatatgtgggaatctcgtcccgcgtttattgagcatgttaat |
254 |
Q |
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| T |
45714235 |
tgtaagtgatatgtgggaatctcgtcccgcgtttattaagcatgttaat |
45714283 |
T |
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