View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17721_low_38 (Length: 241)

Name: NF17721_low_38
Description: NF17721
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17721_low_38
NF17721_low_38
[»] chr7 (52 HSPs)
chr7 (12-167)||(15128973-15129128)
chr7 (175-241)||(816276-816342)
chr7 (175-240)||(22501582-22501647)
chr7 (166-241)||(22486372-22486448)
chr7 (166-241)||(2457649-2457724)
chr7 (175-241)||(24605826-24605892)
chr7 (175-241)||(31042239-31042305)
chr7 (167-241)||(10050921-10050996)
chr7 (167-241)||(31425596-31425671)
chr7 (175-241)||(20174008-20174074)
chr7 (175-241)||(20429453-20429519)
chr7 (175-241)||(36636494-36636560)
chr7 (175-241)||(37135370-37135436)
chr7 (175-241)||(40847520-40847586)
chr7 (168-241)||(11036488-11036561)
chr7 (165-241)||(15014490-15014567)
chr7 (168-241)||(42926505-42926578)
chr7 (182-241)||(23577274-23577333)
chr7 (167-241)||(27805997-27806072)
chr7 (167-241)||(38057611-38057686)
chr7 (175-241)||(1907343-1907409)
chr7 (175-241)||(28800866-28800932)
chr7 (182-240)||(39979710-39979768)
chr7 (175-241)||(47523735-47523801)
chr7 (175-240)||(10222715-10222780)
chr7 (168-240)||(24140431-24140503)
chr7 (167-234)||(25777204-25777272)
chr7 (59-140)||(15107469-15107551)
chr7 (175-241)||(20924043-20924109)
chr7 (175-241)||(23232027-23232093)
chr7 (175-241)||(26415412-26415478)
chr7 (175-241)||(32267335-32267401)
chr7 (168-241)||(23699910-23699983)
chr7 (175-239)||(7733399-7733463)
chr7 (167-241)||(9698623-9698698)
chr7 (167-241)||(21917419-21917494)
chr7 (175-241)||(27130322-27130386)
chr7 (187-241)||(23750821-23750875)
chr7 (187-241)||(45664768-45664822)
chr7 (175-241)||(48933124-48933190)
chr7 (168-241)||(18217810-18217883)
chr7 (167-241)||(21871552-21871622)
chr7 (165-241)||(27132806-27132883)
chr7 (167-241)||(15969765-15969838)
chr7 (175-241)||(687865-687931)
chr7 (191-241)||(1842898-1842948)
chr7 (175-241)||(36993808-36993874)
chr7 (196-241)||(3904563-3904608)
chr7 (200-241)||(11852021-11852062)
chr7 (162-195)||(26577254-26577287)
chr7 (209-241)||(2650913-2650945)
chr7 (197-241)||(21623031-21623075)
[»] chr3 (63 HSPs)
chr3 (167-241)||(26830527-26830602)
chr3 (175-241)||(23217293-23217359)
chr3 (167-241)||(1628190-1628265)
chr3 (167-241)||(18104615-18104689)
chr3 (166-241)||(18539778-18539854)
chr3 (167-241)||(9652553-9652628)
chr3 (167-241)||(27449063-27449138)
chr3 (175-241)||(4393435-4393501)
chr3 (175-241)||(17582386-17582452)
chr3 (163-241)||(19269949-19270026)
chr3 (175-241)||(27212866-27212932)
chr3 (175-241)||(31433721-31433787)
chr3 (175-241)||(49915435-49915501)
chr3 (175-240)||(11219122-11219187)
chr3 (168-240)||(20615429-20615502)
chr3 (166-241)||(7623616-7623692)
chr3 (168-240)||(8543446-8543518)
chr3 (168-240)||(27968892-27968964)
chr3 (182-241)||(11007768-11007827)
chr3 (182-241)||(28389964-28390023)
chr3 (167-241)||(30219313-30219388)
chr3 (175-241)||(16299845-16299911)
chr3 (167-241)||(25882546-25882620)
chr3 (175-241)||(29215976-29216042)
chr3 (175-241)||(46942471-46942537)
chr3 (188-241)||(1311044-1311097)
chr3 (175-240)||(8110323-8110388)
chr3 (181-241)||(11915748-11915808)
chr3 (175-241)||(8428155-8428221)
chr3 (175-241)||(11085427-11085493)
chr3 (175-241)||(17762626-17762692)
chr3 (175-241)||(18091632-18091698)
chr3 (175-241)||(19063946-19064012)
chr3 (175-241)||(29704117-29704183)
chr3 (175-241)||(36543733-36543799)
chr3 (188-241)||(19610335-19610388)
chr3 (167-239)||(29451069-29451142)
chr3 (167-241)||(26390719-26390794)
chr3 (187-241)||(5260933-5260987)
chr3 (175-241)||(18380008-18380074)
chr3 (187-241)||(19223445-19223499)
chr3 (187-241)||(19545506-19545560)
chr3 (175-241)||(29956356-29956422)
chr3 (175-241)||(30005511-30005577)
chr3 (175-241)||(31250072-31250138)
chr3 (175-241)||(36564524-36564590)
chr3 (196-241)||(13921330-13921375)
chr3 (182-234)||(15490026-15490078)
chr3 (197-241)||(29236050-29236094)
chr3 (197-241)||(35579610-35579654)
chr3 (197-241)||(48404866-48404910)
chr3 (211-241)||(8546265-8546295)
chr3 (168-241)||(21020041-21020115)
chr3 (195-240)||(10743156-10743201)
chr3 (196-241)||(13905123-13905168)
chr3 (196-241)||(23773482-23773527)
chr3 (196-241)||(26098818-26098863)
chr3 (196-241)||(28859596-28859641)
chr3 (173-234)||(30132330-30132391)
chr3 (196-240)||(3461396-3461440)
chr3 (209-241)||(6718728-6718760)
chr3 (196-240)||(21088757-21088801)
chr3 (197-241)||(21816727-21816771)
[»] chr5 (48 HSPs)
chr5 (175-241)||(27428097-27428163)
chr5 (175-241)||(11927871-11927937)
chr5 (175-241)||(20959496-20959562)
chr5 (166-241)||(7888775-7888851)
chr5 (165-239)||(18413533-18413608)
chr5 (175-241)||(17079393-17079459)
chr5 (175-241)||(33818646-33818712)
chr5 (168-241)||(12328311-12328384)
chr5 (166-241)||(8886936-8887012)
chr5 (166-241)||(12045705-12045781)
chr5 (175-234)||(10420344-10420403)
chr5 (182-241)||(23975630-23975689)
chr5 (167-241)||(29727931-29728006)
chr5 (175-241)||(618282-618348)
chr5 (175-241)||(5982633-5982699)
chr5 (175-241)||(13974163-13974229)
chr5 (175-241)||(15060961-15061027)
chr5 (175-241)||(16121924-16121990)
chr5 (175-241)||(36196382-36196448)
chr5 (165-241)||(17036497-17036574)
chr5 (175-236)||(36716290-36716351)
chr5 (167-241)||(23408959-23409034)
chr5 (182-241)||(23423841-23423900)
chr5 (167-238)||(31158641-31158712)
chr5 (168-241)||(7003815-7003886)
chr5 (187-241)||(17039716-17039770)
chr5 (182-240)||(22649415-22649473)
chr5 (175-241)||(25673313-25673379)
chr5 (175-241)||(36831975-36832041)
chr5 (175-240)||(2472800-2472865)
chr5 (167-234)||(3080788-3080856)
chr5 (182-241)||(13620212-13620271)
chr5 (163-241)||(17986704-17986783)
chr5 (167-241)||(35620428-35620503)
chr5 (175-241)||(8108945-8109011)
chr5 (175-241)||(25652668-25652734)
chr5 (183-241)||(32726811-32726869)
chr5 (175-241)||(33816843-33816909)
chr5 (196-241)||(746953-746998)
chr5 (182-241)||(28265560-28265619)
chr5 (166-241)||(33735058-33735132)
chr5 (196-241)||(10494746-10494791)
chr5 (196-241)||(16631959-16632004)
chr5 (196-241)||(25397873-25397918)
chr5 (196-241)||(40484053-40484098)
chr5 (197-241)||(24138926-24138970)
chr5 (197-241)||(26708670-26708714)
chr5 (197-241)||(26978404-26978448)
[»] chr6 (53 HSPs)
chr6 (162-240)||(12680270-12680349)
chr6 (175-241)||(12844991-12845057)
chr6 (167-241)||(9892942-9893017)
chr6 (167-241)||(21990259-21990333)
chr6 (165-241)||(28364888-28364965)
chr6 (168-240)||(14036601-14036673)
chr6 (166-241)||(27705400-27705476)
chr6 (166-240)||(12351672-12351747)
chr6 (167-241)||(20182124-20182199)
chr6 (167-241)||(22153792-22153867)
chr6 (167-241)||(22579434-22579509)
chr6 (168-234)||(9885224-9885290)
chr6 (175-241)||(14886549-14886615)
chr6 (175-241)||(21140927-21140993)
chr6 (175-241)||(21691581-21691647)
chr6 (175-241)||(22083826-22083892)
chr6 (175-240)||(12951696-12951761)
chr6 (182-241)||(11530220-11530279)
chr6 (167-241)||(15364543-15364618)
chr6 (182-241)||(25397997-25398056)
chr6 (175-241)||(2992603-2992669)
chr6 (175-241)||(5270380-5270446)
chr6 (175-241)||(6598452-6598518)
chr6 (175-241)||(18033610-18033676)
chr6 (175-241)||(27796919-27796985)
chr6 (167-240)||(1939328-1939401)
chr6 (168-241)||(12157461-12157534)
chr6 (182-241)||(23281781-23281840)
chr6 (167-241)||(26224407-26224482)
chr6 (175-241)||(12160931-12160997)
chr6 (167-241)||(16250887-16250961)
chr6 (175-241)||(26939575-26939641)
chr6 (177-234)||(3619635-3619692)
chr6 (175-240)||(24661095-24661160)
chr6 (166-241)||(2669287-2669363)
chr6 (182-241)||(343648-343707)
chr6 (167-241)||(11049836-11049911)
chr6 (190-241)||(12205270-12205321)
chr6 (187-241)||(495712-495766)
chr6 (175-241)||(12200682-12200748)
chr6 (175-241)||(18492357-18492423)
chr6 (175-236)||(22055702-22055763)
chr6 (165-240)||(2396180-2396256)
chr6 (173-241)||(11431725-11431793)
chr6 (168-235)||(18048768-18048836)
chr6 (175-241)||(6978267-6978331)
chr6 (197-240)||(15448395-15448438)
chr6 (175-241)||(17919524-17919590)
chr6 (175-241)||(33250793-33250859)
chr6 (196-241)||(5192274-5192319)
chr6 (183-236)||(13668084-13668137)
chr6 (196-241)||(14872128-14872173)
chr6 (176-240)||(16118135-16118199)
[»] chr1 (59 HSPs)
chr1 (178-241)||(14486717-14486780)
chr1 (175-241)||(13523046-13523112)
chr1 (175-241)||(19081716-19081782)
chr1 (175-241)||(19129604-19129670)
chr1 (167-241)||(15243064-15243139)
chr1 (167-241)||(22789676-22789751)
chr1 (167-241)||(38531255-38531330)
chr1 (175-241)||(9464091-9464157)
chr1 (175-241)||(12161802-12161868)
chr1 (168-238)||(16913665-16913735)
chr1 (175-241)||(18894985-18895051)
chr1 (175-241)||(22158790-22158856)
chr1 (175-241)||(23457885-23457951)
chr1 (175-241)||(41071920-41071986)
chr1 (175-241)||(50845415-50845481)
chr1 (175-241)||(52183666-52183732)
chr1 (175-236)||(46865231-46865292)
chr1 (181-241)||(16258571-16258631)
chr1 (169-241)||(41063179-41063251)
chr1 (168-238)||(20408248-20408319)
chr1 (175-241)||(6459205-6459271)
chr1 (175-241)||(9110060-9110126)
chr1 (175-241)||(12989840-12989906)
chr1 (175-241)||(14760855-14760921)
chr1 (175-241)||(22603536-22603602)
chr1 (175-241)||(41752421-41752487)
chr1 (175-241)||(45839280-45839346)
chr1 (168-241)||(26825221-26825294)
chr1 (175-236)||(29093644-29093705)
chr1 (182-241)||(12720804-12720863)
chr1 (166-241)||(13102295-13102370)
chr1 (174-241)||(17661037-17661104)
chr1 (175-234)||(20580897-20580956)
chr1 (175-241)||(6412138-6412204)
chr1 (175-241)||(9259268-9259334)
chr1 (167-240)||(9985413-9985487)
chr1 (175-241)||(11917774-11917840)
chr1 (175-241)||(13195571-13195637)
chr1 (187-241)||(29549418-29549472)
chr1 (165-241)||(7181640-7181717)
chr1 (182-238)||(18890637-18890693)
chr1 (182-241)||(7830026-7830085)
chr1 (175-234)||(18788002-18788061)
chr1 (168-235)||(30928469-30928536)
chr1 (175-241)||(12370026-12370092)
chr1 (175-236)||(17734044-17734105)
chr1 (197-241)||(4340417-4340461)
chr1 (175-223)||(13295039-13295087)
chr1 (197-241)||(41120822-41120866)
chr1 (197-240)||(46786044-46786087)
chr1 (175-241)||(20290405-20290471)
chr1 (175-241)||(52621142-52621208)
chr1 (196-241)||(19865253-19865298)
chr1 (165-237)||(32046853-32046926)
chr1 (168-241)||(50092383-50092456)
chr1 (197-241)||(6091341-6091385)
chr1 (189-241)||(12174851-12174903)
chr1 (175-207)||(27253957-27253989)
chr1 (195-235)||(30673502-30673542)
[»] chr2 (43 HSPs)
chr2 (168-241)||(8430273-8430346)
chr2 (167-241)||(41637593-41637668)
chr2 (169-241)||(23388463-23388535)
chr2 (166-241)||(26687776-26687851)
chr2 (167-241)||(29749488-29749563)
chr2 (167-241)||(29998644-29998719)
chr2 (167-241)||(32185807-32185882)
chr2 (175-241)||(30783322-30783388)
chr2 (175-241)||(31266338-31266404)
chr2 (175-241)||(32300435-32300501)
chr2 (165-241)||(13788140-13788217)
chr2 (168-241)||(18551338-18551411)
chr2 (165-241)||(27522984-27523061)
chr2 (167-241)||(15636820-15636895)
chr2 (182-241)||(28262355-28262414)
chr2 (175-241)||(1141520-1141586)
chr2 (175-241)||(21293796-21293862)
chr2 (175-241)||(22140449-22140515)
chr2 (175-241)||(41736156-41736222)
chr2 (166-234)||(13134712-13134778)
chr2 (168-240)||(24117315-24117388)
chr2 (175-235)||(27058407-27058467)
chr2 (175-241)||(2556079-2556145)
chr2 (176-234)||(16098996-16099054)
chr2 (175-241)||(18916485-18916551)
chr2 (175-241)||(20065159-20065225)
chr2 (175-241)||(27327600-27327666)
chr2 (175-241)||(28841427-28841493)
chr2 (175-241)||(37802463-37802529)
chr2 (166-235)||(40018776-40018846)
chr2 (168-240)||(8763612-8763683)
chr2 (167-241)||(32008927-32009002)
chr2 (182-241)||(37724077-37724136)
chr2 (175-241)||(14757206-14757272)
chr2 (176-234)||(22192177-22192235)
chr2 (167-228)||(36373875-36373937)
chr2 (192-241)||(28319664-28319713)
chr2 (175-236)||(44366087-44366148)
chr2 (166-241)||(13613178-13613254)
chr2 (196-241)||(43408596-43408641)
chr2 (181-241)||(9004393-9004453)
chr2 (182-234)||(9590461-9590513)
chr2 (198-234)||(37786373-37786409)
[»] scaffold0058 (1 HSPs)
scaffold0058 (165-241)||(74626-74703)
[»] chr4 (43 HSPs)
chr4 (168-241)||(18051818-18051891)
chr4 (166-241)||(19839155-19839231)
chr4 (168-228)||(39234921-39234981)
chr4 (167-241)||(5399586-5399661)
chr4 (167-241)||(25147698-25147773)
chr4 (167-241)||(46286314-46286389)
chr4 (167-241)||(55309298-55309373)
chr4 (175-241)||(9913244-9913310)
chr4 (175-241)||(18744155-18744221)
chr4 (175-241)||(22128397-22128463)
chr4 (175-241)||(37761927-37761993)
chr4 (166-241)||(27040110-27040186)
chr4 (166-241)||(33914035-33914111)
chr4 (166-241)||(37378708-37378784)
chr4 (175-241)||(1638433-1638499)
chr4 (175-241)||(2275763-2275829)
chr4 (175-241)||(22156686-22156752)
chr4 (175-241)||(38223496-38223562)
chr4 (166-241)||(8878859-8878935)
chr4 (167-241)||(5473826-5473901)
chr4 (167-241)||(19680509-19680584)
chr4 (167-236)||(24682417-24682485)
chr4 (182-241)||(36689670-36689729)
chr4 (175-241)||(30269073-30269139)
chr4 (175-241)||(30283050-30283116)
chr4 (187-241)||(32175822-32175876)
chr4 (172-241)||(30420118-30420187)
chr4 (187-240)||(45532665-45532718)
chr4 (182-241)||(12071955-12072014)
chr4 (167-241)||(13565000-13565075)
chr4 (174-237)||(22168253-22168316)
chr4 (196-241)||(29625332-29625377)
chr4 (175-240)||(30568085-30568150)
chr4 (197-241)||(4586843-4586887)
chr4 (196-240)||(9239367-9239411)
chr4 (197-241)||(13028901-13028945)
chr4 (167-241)||(3612972-3613047)
chr4 (196-241)||(14944753-14944798)
chr4 (182-235)||(25225092-25225145)
chr4 (196-241)||(38619854-38619899)
chr4 (185-241)||(4068755-4068811)
chr4 (197-241)||(25026565-25026609)
chr4 (197-241)||(45091282-45091326)
[»] chr8 (48 HSPs)
chr8 (165-241)||(18010145-18010221)
chr8 (167-241)||(3823110-3823185)
chr8 (167-241)||(37992076-37992151)
chr8 (175-241)||(17103950-17104016)
chr8 (168-241)||(17824701-17824772)
chr8 (168-241)||(29345049-29345123)
chr8 (168-241)||(24576109-24576182)
chr8 (167-241)||(4330955-4331030)
chr8 (175-241)||(24479883-24479949)
chr8 (175-240)||(31344258-31344323)
chr8 (162-241)||(32961631-32961711)
chr8 (167-241)||(4647840-4647915)
chr8 (167-241)||(5879181-5879256)
chr8 (164-234)||(18844636-18844707)
chr8 (175-237)||(6816472-6816534)
chr8 (175-241)||(6817040-6817106)
chr8 (175-233)||(9915133-9915191)
chr8 (175-241)||(15251589-15251654)
chr8 (175-241)||(17810284-17810350)
chr8 (175-241)||(19240853-19240919)
chr8 (175-241)||(19314037-19314103)
chr8 (175-241)||(21350464-21350530)
chr8 (175-241)||(27910849-27910915)
chr8 (175-241)||(27957268-27957334)
chr8 (175-241)||(29350909-29350975)
chr8 (175-241)||(40289506-40289571)
chr8 (165-241)||(27869213-27869290)
chr8 (184-241)||(43431644-43431701)
chr8 (168-236)||(9631382-9631450)
chr8 (166-241)||(22939289-22939365)
chr8 (166-241)||(24193281-24193357)
chr8 (167-241)||(33652544-33652619)
chr8 (168-236)||(3692261-3692330)
chr8 (196-241)||(26399092-26399137)
chr8 (196-241)||(32247916-32247961)
chr8 (197-241)||(5670254-5670298)
chr8 (197-241)||(11938753-11938797)
chr8 (197-241)||(19256220-19256264)
chr8 (197-241)||(24636660-24636704)
chr8 (174-241)||(8555389-8555456)
chr8 (182-241)||(16062024-16062083)
chr8 (182-241)||(25651071-25651130)
chr8 (163-235)||(6103846-6103919)
chr8 (176-241)||(21219325-21219388)
chr8 (196-241)||(30687943-30687988)
chr8 (196-241)||(31399593-31399638)
chr8 (197-241)||(25000516-25000560)
chr8 (209-241)||(33413055-33413087)
[»] scaffold0006 (1 HSPs)
scaffold0006 (175-241)||(121072-121138)
[»] scaffold0024 (1 HSPs)
scaffold0024 (175-240)||(112316-112381)
[»] scaffold0047 (1 HSPs)
scaffold0047 (166-241)||(58560-58636)
[»] scaffold0603 (1 HSPs)
scaffold0603 (167-241)||(6064-6139)
[»] scaffold0576 (1 HSPs)
scaffold0576 (167-241)||(9314-9389)
[»] scaffold0087 (1 HSPs)
scaffold0087 (167-241)||(37872-37947)
[»] scaffold0007 (3 HSPs)
scaffold0007 (182-241)||(202769-202828)
scaffold0007 (168-241)||(276219-276293)
scaffold0007 (191-241)||(3746-3796)
[»] scaffold0717 (1 HSPs)
scaffold0717 (175-241)||(1004-1070)
[»] scaffold0219 (1 HSPs)
scaffold0219 (175-241)||(19591-19657)
[»] scaffold0001 (3 HSPs)
scaffold0001 (175-241)||(8195-8261)
scaffold0001 (175-241)||(21927-21993)
scaffold0001 (175-241)||(84291-84357)
[»] scaffold0599 (1 HSPs)
scaffold0599 (181-241)||(7499-7559)
[»] scaffold0655 (1 HSPs)
scaffold0655 (175-241)||(3247-3311)
[»] scaffold0184 (1 HSPs)
scaffold0184 (182-241)||(7451-7510)
[»] scaffold0108 (1 HSPs)
scaffold0108 (167-241)||(12632-12706)
[»] scaffold0069 (1 HSPs)
scaffold0069 (182-241)||(10153-10212)
[»] scaffold0023 (1 HSPs)
scaffold0023 (175-241)||(39788-39854)
[»] scaffold0161 (1 HSPs)
scaffold0161 (175-240)||(6783-6848)
[»] scaffold0009 (1 HSPs)
scaffold0009 (175-238)||(219624-219687)
[»] scaffold0076 (1 HSPs)
scaffold0076 (187-241)||(26483-26537)
[»] scaffold0062 (1 HSPs)
scaffold0062 (185-238)||(43915-43968)
[»] scaffold0240 (1 HSPs)
scaffold0240 (197-241)||(15075-15119)
[»] scaffold0014 (1 HSPs)
scaffold0014 (197-241)||(22221-22265)
[»] scaffold0502 (1 HSPs)
scaffold0502 (167-241)||(10871-10946)
[»] scaffold0128 (1 HSPs)
scaffold0128 (197-241)||(10748-10792)


Alignment Details
Target: chr7 (Bit Score: 136; Significance: 5e-71; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 12 - 167
Target Start/End: Original strand, 15128973 - 15129128
Alignment:
Q  12 atgaaaatcataacattacattatattacaatgacacaccaatgcatatgctacatttattgaaattcaaatggatatctaacaacaccaactgataagt 111  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  15128973 atgaaaatcataacattacattatattacaaagacacaccaatgcatatgctacatttattgaaattcaaatggatatctaacaacaccaactgacaagt 15129072  T
Q  112 tggaaacagcgattgtttattaaaagtagctagtatcatgtagattcatgatataa 167  Q
    |||||||||  |||||||||||||||||||||| ||||||||||||||||||||||    
T  15129073 tggaaacagacattgtttattaaaagtagctaggatcatgtagattcatgatataa 15129128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 816342 - 816276
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  816342 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 816276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 175 - 240
Target Start/End: Original strand, 22501582 - 22501647
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtca 240  Q
    ||||| ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  22501582 aaaaaccaaaaattagtgagggaaatttagagagggaaaacgtgaaatccctctctaattccgtca 22501647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 166 - 241
Target Start/End: Original strand, 22486372 - 22486448
Alignment:
Q  166 aacactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||||||||||||  ||||||||||||||| |||||||| || |||||||||||||||||||||||||||||||||    
T  22486372 aacactactaaaaaaacaaaaattagtgagggaaatttagtgacggaaaacgtgaaatccctctctaattccgtcac 22486448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 166 - 241
Target Start/End: Original strand, 2457649 - 2457724
Alignment:
Q  166 aacactactaaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||||||||| |||||||||||||||||||||| | || ||||||| ||||||||||||| |||||||||||    
T  2457649 aacactactaaaaaacaaaaattagtgaggaaaattttgtgagggaaaacatgaaatccctctcaaattccgtcac 2457724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 24605826 - 24605892
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| |||||||||||||||||||||||| || ||||||||||||||| |||||||||||||||||    
T  24605826 aaaaatcaaaaattagtgaggaaaatttagtgagggaaaacgtgaaatctctctctaattccgtcac 24605892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 31042239 - 31042305
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||||||||||||||||||| || |||||||| ||||||||||||||||||||||||||| |||||    
T  31042239 aaaaagcaaaaattagtgagggaattttagagagggaaaacgtgaaatccctctctaattctgtcac 31042305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 167 - 241
Target Start/End: Complemental strand, 10050996 - 10050921
Alignment:
Q  167 acactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||||||||  ||||||||||||||| |||||||| || ||||||||| |||||||||||||||||||||||    
T  10050996 acactactaaaaaaacaaaaattagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcac 10050921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 167 - 241
Target Start/End: Complemental strand, 31425671 - 31425596
Alignment:
Q  167 acactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||||||||  ||||||||||||||| |||||||| || ||||||||| |||||||||||||||||||||||    
T  31425671 acactactaaaaaaacaaaaattagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcac 31425596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 20174008 - 20174074
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||||||||| |||||| | || |||||||||||||||||||||||||||||||||    
T  20174008 aaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcac 20174074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 20429453 - 20429519
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||||||||| |||||| | || |||||||||||||||||||||||||||||||||    
T  20429453 aaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcac 20429519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 36636494 - 36636560
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||||||||| |||||||| || ||||||| |||||||||||||||||||||||||    
T  36636494 aaaaaacaaaaattagtgaggcaaatttagtgagggaaaacatgaaatccctctctaattccgtcac 36636560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 37135436 - 37135370
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||||||||| |||||| | || |||||||||||||||||||||||||||||||||    
T  37135436 aaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcac 37135370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 40847586 - 40847520
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||||||||| |||||||| || ||||||| |||||||||||||||||||||||||    
T  40847586 aaaaaacaaaaattagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcac 40847520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 168 - 241
Target Start/End: Original strand, 11036488 - 11036561
Alignment:
Q  168 cactactaaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||||||||||   ||||||||||||| |||||| | || |||||||||||||||||||||||||||||||||    
T  11036488 cactactaaaaaaacaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcac 11036561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 165 - 241
Target Start/End: Complemental strand, 15014567 - 15014490
Alignment:
Q  165 taacactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||||||||||  ||||||||||||||| | |||||| || ||||||| |||||||||||||||||||||||||    
T  15014567 taacactactaaaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcac 15014490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 168 - 241
Target Start/End: Complemental strand, 42926578 - 42926505
Alignment:
Q  168 cactactaaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||||||| ||||||||||||||| | |||||| || | ||||| |||||||||||||||||||||||||    
T  42926578 cactactaaaaaacaaaaattagtgagggatatttagtgaggaaaaacatgaaatccctctctaattccgtcac 42926505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 182 - 241
Target Start/End: Complemental strand, 23577333 - 23577274
Alignment:
Q  182 aaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||||||||| |||||||| || |||||||||||||||||| ||||||||||||||    
T  23577333 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctatctaattccgtcac 23577274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 167 - 241
Target Start/End: Original strand, 27805997 - 27806072
Alignment:
Q  167 acactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||||||||  ||||||||||||||| | |||||| || ||||||| |||||||||||||||||||||||||    
T  27805997 acactactaaaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcac 27806072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 167 - 241
Target Start/End: Original strand, 38057611 - 38057686
Alignment:
Q  167 acactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||||||||  ||||||||| ||||| |||||||| || |||||||||||||||||||| ||||||||||||    
T  38057611 acactactaaaaaatcaaaaattaatgagggaaatttagcgagggaaaacgtgaaatccctctttaattccgtcac 38057686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 1907343 - 1907409
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| |||||||||||||||||||| ||| || ||||||| |||||||||||||||||| ||||||    
T  1907343 aaaaaacaaaaattagtgaggaaaatctagtgagggaaaacatgaaatccctctctaatttcgtcac 1907409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 28800866 - 28800932
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||||||||| | |||||| || ||||||| |||||||||||||||||||||||||    
T  28800866 aaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcac 28800932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 182 - 240
Target Start/End: Complemental strand, 39979768 - 39979710
Alignment:
Q  182 aaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtca 240  Q
    |||||||||||||| |||||||| || ||||||| ||||||||||||||||||||||||    
T  39979768 aaaaattagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtca 39979710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 47523801 - 47523735
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||||||||| | |||||| || ||||||| |||||||||||||||||||||||||    
T  47523801 aaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcac 47523735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 175 - 240
Target Start/End: Complemental strand, 10222780 - 10222715
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtca 240  Q
    |||||| ||||||||||||| ||||||||||||  |||||||| ||||||||||||||||| ||||    
T  10222780 aaaaagtaaaaattagtgagaaaaatttagagaaagaaaacgtaaaatccctctctaattctgtca 10222715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 168 - 240
Target Start/End: Original strand, 24140431 - 24140503
Alignment:
Q  168 cactactaaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtca 240  Q
    |||||||||||| ||||||||||||||| |||||||| || ||||||| | |||||| |||| ||||||||||    
T  24140431 cactactaaaaaacaaaaattagtgagggaaatttagtgagggaaaacataaaatccttctccaattccgtca 24140503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 167 - 234
Target Start/End: Complemental strand, 25777272 - 25777204
Alignment:
Q  167 acactactaaaaa-gcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaatt 234  Q
    ||||||||||||| |||||| ||| ||||| ||||||||||| ||||||||||||||| ||||||||||    
T  25777272 acactactaaaaatgcaaaatttaatgagggaaatttagagagggaaaacgtgaaatcactctctaatt 25777204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 59 - 140
Target Start/End: Original strand, 15107469 - 15107551
Alignment:
Q  59 atgctacatttattgaaattcaaatggatatctaacaacaccaactgataagttggaaacagcgatt-gtttattaaaagtag 140  Q
    |||||||| ||||| ||||||| |||||||||||| || |||||||||| |||||||||||  ||||  ||||||||||||||    
T  15107469 atgctacacttatttaaattcagatggatatctaagaaaaccaactgattagttggaaacaaagattcctttattaaaagtag 15107551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 20924109 - 20924043
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||||||| | |||||||| || ||||||| ||||||||||||||||||| |||||    
T  20924109 aaaaaacaaaaattagtgatggaaatttagtgagggaaaacatgaaatccctctctaattctgtcac 20924043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 23232027 - 23232093
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||||||||| | |||||| || ||||||| |||||||||| ||||||||||||||    
T  23232027 aaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaatccctttctaattccgtcac 23232093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 26415412 - 26415478
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||||||||||||||||||| || |||||||| | ||||||| |||||||||| ||||| ||||||    
T  26415412 aaaaagcaaaaattagtgagggaattttagagaggaaaaacgtaaaatccctctttaatttcgtcac 26415478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 32267335 - 32267401
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||| ||||||| |||||| ||||||||||| ||||||||  ||||||||||||||||| |||||    
T  32267335 aaaaagtaaaaatttgtgagggaaatttagagagggaaaacgcaaaatccctctctaattctgtcac 32267401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 168 - 241
Target Start/End: Complemental strand, 23699983 - 23699910
Alignment:
Q  168 cactactaaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||||||| ||||||||||||||  |||||| | || |||||| ||||||||||||| |||||| |||||    
T  23699983 cactactaaaaaacaaaaattagtgagagaaattttgtgagggaaaatgtgaaatccctctttaattctgtcac 23699910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 175 - 239
Target Start/End: Complemental strand, 7733463 - 7733399
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtc 239  Q
    ||||| ||||||||||||||| | |||||| || | ||||| |||||||||||||||||||||||    
T  7733463 aaaaatcaaaaattagtgagggatatttagtgaggtaaaacatgaaatccctctctaattccgtc 7733399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 241
Target Start/End: Complemental strand, 9698698 - 9698623
Alignment:
Q  167 acactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||||||||  | ||| ||||||||| |||||||| || ||||||||| |||| ||||||||||||||||||    
T  9698698 acactactaaaaaaactaaatttagtgagggaaatttagtgagggaaaacgtaaaattcctctctaattccgtcac 9698623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 241
Target Start/End: Complemental strand, 21917494 - 21917419
Alignment:
Q  167 acactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||||||||  | ||| ||||||||| | |||||| || ||||||||| |||||||||||||||||||||||    
T  21917494 acactactaaaaaaactaaatttagtgagggacatttagtgagggaaaacgtaaaatccctctctaattccgtcac 21917419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 27130322 - 27130386
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||| |||||||| ||||| ||||||||||| |||||| |||||||||  |||||||||||||||    
T  27130322 aaaaagtaaaaattaatgagggaaatttagagagggaaaatgtgaaatcc--ctctaattccgtcac 27130386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 187 - 241
Target Start/End: Complemental strand, 23750875 - 23750821
Alignment:
Q  187 ttagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||||||| |||||||| || |||||| || |||||||||||||||||||||||    
T  23750875 ttagtgagggaaatttagtgagggaaaatgtaaaatccctctctaattccgtcac 23750821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 187 - 241
Target Start/End: Original strand, 45664768 - 45664822
Alignment:
Q  187 ttagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||||||| |||| ||| || ||||||||| |||||||||||||||||||||||    
T  45664768 ttagtgagggaaatatagtgagggaaaacgtaaaatccctctctaattccgtcac 45664822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 48933124 - 48933190
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||||||||| |||||| | ||   |||||||||||| ||||||||||||||||||    
T  48933124 aaaaaacaaaaattagtgagggaaattttgtgagaaaaaacgtgaaattcctctctaattccgtcac 48933190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 168 - 241
Target Start/End: Original strand, 18217810 - 18217883
Alignment:
Q  168 cactactaaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||||||||||   ||| ||||||||| |||||||| || | ||||||| |||||||||||||||| ||||||    
T  18217810 cactactaaaaaattaaatttagtgagggaaatttagtgaggaaaaacgtaaaatccctctctaatttcgtcac 18217883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 241
Target Start/End: Original strand, 21871552 - 21871622
Alignment:
Q  167 acactactaaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||||| ||||| |||||||||||||||||||||||| || |||||| || |||    ||||||||||||||||    
T  21871552 acactacaaaaaaacaaaaattagtgaggaaaatttagtgagggaaaatgtaaaa----tctctaattccgtcac 21871622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 241
Target Start/End: Complemental strand, 27132883 - 27132806
Alignment:
Q  165 taacactacta-aaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||||||||| |||||||||||||||||||| |||||  |||| | |||||| |||||  ||||||||||| |||||    
T  27132883 taacactactagaaaagcaaaaattagtgagggaaattgtgagaggaaaaacgcgaaatatctctctaattctgtcac 27132806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 241
Target Start/End: Original strand, 15969765 - 15969838
Alignment:
Q  167 acactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||||||||  ||||||||||||||  | |||||| || ||||||| |||||| ||||||||||||||||||    
T  15969765 acactactaaaaaaacaaaaattagtgag--atatttagtgagggaaaacatgaaattcctctctaattccgtcac 15969838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 687865 - 687931
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||||||||  |||||||| || |||||| || |||||| |||||||||| |||||    
T  687865 aaaaaacaaaaattagtgagagaaatttagtgagggaaaatgtaaaatccttctctaattctgtcac 687931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 241
Target Start/End: Original strand, 1842898 - 1842948
Alignment:
Q  191 tgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| |||||||| || ||||||||| ||||||||| |||||||||||||    
T  1842898 tgagggaaatttagtgagggaaaacgtaaaatccctccctaattccgtcac 1842948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 36993808 - 36993874
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||||||| | |||||||| || | ||||| ||||||| || ||||||||||||||    
T  36993808 aaaaaacaaaaattagtgaaggaaatttagtgaggaaaaacatgaaatctctttctaattccgtcac 36993874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 196 - 241
Target Start/End: Complemental strand, 3904608 - 3904563
Alignment:
Q  196 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||| |||| || ||||||||| |||||||||||||||||||||||    
T  3904608 aaaaattagtgagggaaaacgtaaaatccctctctaattccgtcac 3904563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 200 - 241
Target Start/End: Original strand, 11852021 - 11852062
Alignment:
Q  200 tttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||| ||||||| |||||||| ||||||||||||||||    
T  11852021 tttagagagggaaaacctgaaatccttctctaattccgtcac 11852062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 195
Target Start/End: Original strand, 26577254 - 26577287
Alignment:
Q  162 atataacactactaaaaagcaaaaattagtgagg 195  Q
    |||||||||||||||||| |||||||||||||||    
T  26577254 atataacactactaaaaaacaaaaattagtgagg 26577287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 209 - 241
Target Start/End: Complemental strand, 2650945 - 2650913
Alignment:
Q  209 ggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||||||| |||||||||||||||||||||||    
T  2650945 ggaaaacgtaaaatccctctctaattccgtcac 2650913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 241
Target Start/End: Original strand, 21623031 - 21623075
Alignment:
Q  197 aaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||| || ||||||||| |||||||||||||||||| ||||    
T  21623031 aaatttagtgagggaaaacgtaaaatccctctctaattccatcac 21623075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 60; Significance: 1e-25; HSPs: 63)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 167 - 241
Target Start/End: Complemental strand, 26830602 - 26830527
Alignment:
Q  167 acactactaaaaa-gcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||||||||||| |||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  26830602 acactactaaaaaagcaaaaattagtgagggaaatttagagagggaaaacgtgaaatccctctctaattccgtcac 26830527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 23217359 - 23217293
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  23217359 aaaaagcaaaaattggtgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcac 23217293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 167 - 241
Target Start/End: Original strand, 1628190 - 1628265
Alignment:
Q  167 acactactaaaaa-gcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||||||||||| | |||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||    
T  1628190 acactactaaaaaagtaaaaattagtgagggaaatttagagagggaaaacgtgaaatccctctctaatttcgtcac 1628265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 167 - 241
Target Start/End: Complemental strand, 18104689 - 18104615
Alignment:
Q  167 acactactaaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||||||||||| ||||||||||||||| |||||| | || ||||||| |||||||||||||||||||||||||    
T  18104689 acactactaaaaaacaaaaattagtgagggaaattttgtgagggaaaacatgaaatccctctctaattccgtcac 18104615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 166 - 241
Target Start/End: Original strand, 18539778 - 18539854
Alignment:
Q  166 aacactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||||||||||||  ||||||||||||||| |||||| | || |||||||||||||||||||||||||||||||||    
T  18539778 aacactactaaaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcac 18539854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 167 - 241
Target Start/End: Original strand, 9652553 - 9652628
Alignment:
Q  167 acactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||||||||  ||||||||||||||| |||||| | || |||||||||||||||||||||||||||||||||    
T  9652553 acactactaaaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcac 9652628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 167 - 241
Target Start/End: Original strand, 27449063 - 27449138
Alignment:
Q  167 acactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||||||||  ||||||||||||||| |||||||| || ||||||||| |||||||||||||||||||||||    
T  27449063 acactactaaaaaaacaaaaattagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcac 27449138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 4393501 - 4393435
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||||||||| |||||| | || |||||||||||||||||||||||||||||||||    
T  4393501 aaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcac 4393435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 17582452 - 17582386
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||||||||| |||||| | || |||||||||||||||||||||||||||||||||    
T  17582452 aaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcac 17582386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 163 - 241
Target Start/End: Complemental strand, 19270026 - 19269949
Alignment:
Q  163 tataacactactaaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||||| ||||||||||||||| |||||||| || ||||||||| |||||||||| ||||||||||||    
T  19270026 tataaaactactaaaaa-caaaaattagtgagggaaatttagtgagggaaaacgtaaaatccctctttaattccgtcac 19269949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 27212932 - 27212866
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||||||||| ||||||||||| | |||||||||||||||||| ||||||||||||    
T  27212932 aaaaaacaaaaattagtgagggaaatttagagaggaaaaacgtgaaatccctctttaattccgtcac 27212866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 31433721 - 31433787
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||||||||||||||||||| || |||||| | |||||||||||||| ||||||||||||||||||    
T  31433721 aaaaagcaaaaattagtgagggaattttagaaagggaaaacgtgaaattcctctctaattccgtcac 31433787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 49915435 - 49915501
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||||||||| |||||||| || ||||||| |||||||||||||||||||||||||    
T  49915435 aaaaaacaaaaattagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcac 49915501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 175 - 240
Target Start/End: Original strand, 11219122 - 11219187
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtca 240  Q
    ||||| |||| ||||||||||||||||| | || ||||||||||||||||||||||||||||||||    
T  11219122 aaaaaacaaatattagtgaggaaaattttgtgagggaaaacgtgaaatccctctctaattccgtca 11219187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 168 - 240
Target Start/End: Complemental strand, 20615502 - 20615429
Alignment:
Q  168 cactactaaa-aagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtca 240  Q
    |||||||||| || ||||||||||||||| ||||||||||| |||||||||||||| |||||||||||| ||||    
T  20615502 cactactaaagaaacaaaaattagtgagggaaatttagagaaggaaaacgtgaaattcctctctaattctgtca 20615429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 166 - 241
Target Start/End: Complemental strand, 7623692 - 7623616
Alignment:
Q  166 aacactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||||||||||||  ||||||||||||||| |||||| | || |||||| ||||||||||||||||||||||||||    
T  7623692 aacactactaaaaaatcaaaaattagtgagggaaattttgtgagggaaaatgtgaaatccctctctaattccgtcac 7623616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 168 - 240
Target Start/End: Original strand, 8543446 - 8543518
Alignment:
Q  168 cactactaaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtca 240  Q
    ||||||||| ||  |||||||||||||| |||||| | || ||||||||||||||||||||||||||||||||    
T  8543446 cactactaataaaaaaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtca 8543518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 168 - 240
Target Start/End: Original strand, 27968892 - 27968964
Alignment:
Q  168 cactactaaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtca 240  Q
    |||||||||||| ||||||||||||| | |||||||| || ||||||| ||||||||||||||||||| ||||    
T  27968892 cactactaaaaaacaaaaattagtgacggaaatttagtgagggaaaacatgaaatccctctctaattctgtca 27968964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 182 - 241
Target Start/End: Complemental strand, 11007827 - 11007768
Alignment:
Q  182 aaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||||||||| |||||||| || ||||||||| |||||||||||||||||||||||    
T  11007827 aaaaattagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcac 11007768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 182 - 241
Target Start/End: Original strand, 28389964 - 28390023
Alignment:
Q  182 aaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||||||||| |||||||| || |||||||||||||||| ||||||||||||||||    
T  28389964 aaaaattagtgagggaaatttagtgagggaaaacgtgaaatccttctctaattccgtcac 28390023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 167 - 241
Target Start/End: Original strand, 30219313 - 30219388
Alignment:
Q  167 acactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||||||||  ||||||||||||||| |||||||| || | ||||| |||||||||||||||||||||||||    
T  30219313 acactactaaaaaaacaaaaattagtgagggaaatttagtgaggaaaaacatgaaatccctctctaattccgtcac 30219388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 16299845 - 16299911
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||||||||| |||||| | || ||||||| |||||||||||||||||||||||||    
T  16299845 aaaaaacaaaaattagtgagggaaatttggtgagggaaaacatgaaatccctctctaattccgtcac 16299911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 167 - 241
Target Start/End: Original strand, 25882546 - 25882620
Alignment:
Q  167 acactactaaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||||||||   ||||||||||||| | |||||| || ||||||| |||||||||||||||||||||||||    
T  25882546 acactactaaaaaaacaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcac 25882620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 29215976 - 29216042
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||||||||| |||||||| || ||||||| |||||||||||||||||||| ||||    
T  29215976 aaaaaacaaaaattagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccatcac 29216042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 46942471 - 46942537
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||||||| | |||||| || |||||||| ||||||||||||||||||||||||||| |||||    
T  46942471 aaaaagcaaaaaattgtgagggaattttagagagggaaaacgtgaaatccctctctaattctgtcac 46942537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 188 - 241
Target Start/End: Complemental strand, 1311097 - 1311044
Alignment:
Q  188 tagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||| |||||||| |||||||||||| |||||||||||||||||||||||    
T  1311097 tagtgagggaaatttagtgatggaaaacgtaaaatccctctctaattccgtcac 1311044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 175 - 240
Target Start/End: Original strand, 8110323 - 8110388
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtca 240  Q
    ||||| ||||||||||||||| |||||||| || ||||||||| |||| |||||||||||||||||    
T  8110323 aaaaaacaaaaattagtgagggaaatttagtgagggaaaacgtaaaattcctctctaattccgtca 8110388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 181 - 241
Target Start/End: Original strand, 11915748 - 11915808
Alignment:
Q  181 caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||| |||||||| || ||||||||| |||||||||||||||||||||||    
T  11915748 caaaatttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcac 11915808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 8428155 - 8428221
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||||||||| | |||||| || ||||||| ||||||| |||||||||||||||||    
T  8428155 aaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaatctctctctaattccgtcac 8428221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 11085493 - 11085427
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||||||||  |||||||| || |||||  ||||||||||||||||||||||||||    
T  11085493 aaaaaacaaaaattagtgagagaaatttagtgagggaaattgtgaaatccctctctaattccgtcac 11085427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 17762626 - 17762692
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||||||||| | |||||| || ||||||| ||||||| |||||||||||||||||    
T  17762626 aaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaatcgctctctaattccgtcac 17762692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 18091698 - 18091632
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||||||||| | |||||| || ||||||| | |||||||||||||||||||||||    
T  18091698 aaaaaacaaaaattagtgagggatatttagtgagggaaaacataaaatccctctctaattccgtcac 18091632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 19063946 - 19064012
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||||||||| | |||||| || ||||||| ||||||| |||||||||||||||||    
T  19063946 aaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaatcgctctctaattccgtcac 19064012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 29704183 - 29704117
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||||||||| |||||| | ||  ||||||||||||||||||| ||||||||||||    
T  29704183 aaaaaacaaaaattagtgagggaaattttgtgagagaaaacgtgaaatccctctttaattccgtcac 29704117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 36543733 - 36543799
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||||||||| |||||| | || ||||||| |||||||||||||||||| ||||||    
T  36543733 aaaaaacaaaaattagtgagggaaattttgtgagggaaaacatgaaatccctctctaatttcgtcac 36543799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 188 - 241
Target Start/End: Original strand, 19610335 - 19610388
Alignment:
Q  188 tagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||| |||||||| || ||||||| |||||||||||||||||||||||||    
T  19610335 tagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcac 19610388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 167 - 239
Target Start/End: Original strand, 29451069 - 29451142
Alignment:
Q  167 acactactaaa-aagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtc 239  Q
    ||||||||||| || |||||||||| |||  |||||||| || ||||||||| |||||||||||||||||||||    
T  29451069 acactactaaataaacaaaaattagcgagagaaatttagtgagggaaaacgtaaaatccctctctaattccgtc 29451142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 241
Target Start/End: Complemental strand, 26390794 - 26390719
Alignment:
Q  167 acactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||||||||  ||||||||||||||| | |||| | || ||| ||| |||||||||||||||||||||||||    
T  26390794 acactactaaaaaaacaaaaattagtgagggatattttgtgagggataacatgaaatccctctctaattccgtcac 26390719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 187 - 241
Target Start/End: Original strand, 5260933 - 5260987
Alignment:
Q  187 ttagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||||||| |||| ||| || ||||||||| |||||||||||||||||||||||    
T  5260933 ttagtgagggaaatatagtgagggaaaacgtaaaatccctctctaattccgtcac 5260987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 18380008 - 18380074
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||||||||| |||||||  || |||||| || |||||||||| ||||||||||||    
T  18380008 aaaaaacaaaaattagtgagggaaatttaatgagggaaaatgtaaaatccctctttaattccgtcac 18380074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 187 - 241
Target Start/End: Original strand, 19223445 - 19223499
Alignment:
Q  187 ttagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||||||| |||||||| |  ||||||||| |||||||||||||||||||||||    
T  19223445 ttagtgagggaaatttagtgggggaaaacgtaaaatccctctctaattccgtcac 19223499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 187 - 241
Target Start/End: Original strand, 19545506 - 19545560
Alignment:
Q  187 ttagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||||||| |||||||| || | ||||||| |||||||||||||||||||||||    
T  19545506 ttagtgagggaaatttagtgaggaaaaacgtaaaatccctctctaattccgtcac 19545560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 29956356 - 29956422
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||| ||||| |||||| | || |||||| ||||||||||| ||||||||||||||    
T  29956356 aaaaaacaaaaattaatgagggaaattttgtgagggaaaatgtgaaatccctttctaattccgtcac 29956422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 30005511 - 30005577
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||| ||||| |||||| | || |||||| ||||||||||| ||||||||||||||    
T  30005511 aaaaaacaaaaattaatgagggaaattttgtgagggaaaatgtgaaatccctttctaattccgtcac 30005577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 31250072 - 31250138
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||| ||||||| |||||| ||||||||||| |||||||   ||||||||||||||||| |||||    
T  31250072 aaaaagaaaaaatttgtgagggaaatttagagagggaaaacacaaaatccctctctaattctgtcac 31250138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 36564590 - 36564524
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||||||||| |||||| | || ||||| | |||||||||||||||||| ||||||    
T  36564590 aaaaaacaaaaattagtgagggaaattttgtgagggaaagcatgaaatccctctctaatttcgtcac 36564524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 196 - 241
Target Start/End: Original strand, 13921330 - 13921375
Alignment:
Q  196 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||||||| || ||||||||| |||||||||||||||||||||||    
T  13921330 aaaatttagtgagggaaaacgtaaaatccctctctaattccgtcac 13921375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 234
Target Start/End: Original strand, 15490026 - 15490078
Alignment:
Q  182 aaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaatt 234  Q
    |||||||||||||| |||||||| ||  ||||||||||||||||||| |||||    
T  15490026 aaaaattagtgagggaaatttagtgagagaaaacgtgaaatccctctttaatt 15490078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 241
Target Start/End: Original strand, 29236050 - 29236094
Alignment:
Q  197 aaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||| || ||||||||| |||||||||||||||||||||||    
T  29236050 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcac 29236094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 241
Target Start/End: Complemental strand, 35579654 - 35579610
Alignment:
Q  197 aaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||| || ||||||||| |||||||||||||||||||||||    
T  35579654 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcac 35579610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 241
Target Start/End: Original strand, 48404866 - 48404910
Alignment:
Q  197 aaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||| || ||||||||| |||||||||||||||||||||||    
T  48404866 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcac 48404910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 211 - 241
Target Start/End: Original strand, 8546265 - 8546295
Alignment:
Q  211 aaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||||||||||||||||||||||||||    
T  8546265 aaaacgtgaaatccctctctaattccgtcac 8546295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 241
Target Start/End: Original strand, 21020041 - 21020115
Alignment:
Q  168 cactactaaa-aagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||||| || |||||||||||||||  | ||||| || ||||||| | |||||| ||||||||||||||||    
T  21020041 cactactaaataaacaaaaattagtgagggcagtttagtgagggaaaacataaaatccttctctaattccgtcac 21020115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 240
Target Start/End: Original strand, 10743156 - 10743201
Alignment:
Q  195 gaaaatttagagatggaaaacgtgaaatccctctctaattccgtca 240  Q
    ||||||||||||||||||||| |||||| | ||||||||| |||||    
T  10743156 gaaaatttagagatggaaaacatgaaattcgtctctaatttcgtca 10743201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 196 - 241
Target Start/End: Complemental strand, 13905168 - 13905123
Alignment:
Q  196 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||| |||| || ||||||||| |||||||||||||||||||||||    
T  13905168 aaaaattagtgagggaaaacgtaaaatccctctctaattccgtcac 13905123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 196 - 241
Target Start/End: Original strand, 23773482 - 23773527
Alignment:
Q  196 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||| |||| || ||||||||| |||||||||||||||||||||||    
T  23773482 aaaaattagtgagggaaaacgtaaaatccctctctaattccgtcac 23773527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 196 - 241
Target Start/End: Original strand, 26098818 - 26098863
Alignment:
Q  196 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||| |||| || ||||||| |||||||||||||||||||||||||    
T  26098818 aaaaattagtgagggaaaacatgaaatccctctctaattccgtcac 26098863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 196 - 241
Target Start/End: Original strand, 28859596 - 28859641
Alignment:
Q  196 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||||||| || | ||||||| |||||||||||||||||||||||    
T  28859596 aaaatttagtgaggtaaaacgtaaaatccctctctaattccgtcac 28859641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 234
Target Start/End: Complemental strand, 30132391 - 30132330
Alignment:
Q  173 ctaaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaatt 234  Q
    |||||||||||||||||   ||||||||| ||||||| ||||| | |||| |||||||||||    
T  30132391 ctaaaaagcaaaaattatctaggaaaattaagagatgaaaaacataaaattcctctctaatt 30132330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 240
Target Start/End: Complemental strand, 3461440 - 3461396
Alignment:
Q  196 aaaatttagagatggaaaacgtgaaatccctctctaattccgtca 240  Q
    |||| |||| || ||||||||| ||||||||||||||||||||||    
T  3461440 aaaaattagtgagggaaaacgtaaaatccctctctaattccgtca 3461396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 209 - 241
Target Start/End: Original strand, 6718728 - 6718760
Alignment:
Q  209 ggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||||||||||||| ||||||||||||||    
T  6718728 ggaaaacgtgaaatccctttctaattccgtcac 6718760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 240
Target Start/End: Original strand, 21088757 - 21088801
Alignment:
Q  196 aaaatttagagatggaaaacgtgaaatccctctctaattccgtca 240  Q
    ||||||||| || ||||||| ||||||||||||| ||||||||||    
T  21088757 aaaatttagtgagggaaaacatgaaatccctctcgaattccgtca 21088801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 241
Target Start/End: Original strand, 21816727 - 21816771
Alignment:
Q  197 aaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||| || ||||||||| |||| ||||||||||||||||||    
T  21816727 aaatttagtgagggaaaacgtaaaattcctctctaattccgtcac 21816771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 59; Significance: 4e-25; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 27428163 - 27428097
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  27428163 aaaaagaaaaaattagtgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcac 27428097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 11927937 - 11927871
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||| |||||||||||||||| || |||||||| |||||||||||||||||||||||||||||||||    
T  11927937 aaaatgcaaaaattagtgagggaattttagagacggaaaacgtgaaatccctctctaattccgtcac 11927871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 20959496 - 20959562
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||| |||||||||||||| ||||||||||| ||||||||||||||| |||||||||||||||||    
T  20959496 aaaaagtaaaaattagtgagggaaatttagagagggaaaacgtgaaatctctctctaattccgtcac 20959562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 166 - 241
Target Start/End: Original strand, 7888775 - 7888851
Alignment:
Q  166 aacactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||||||||||||  |||||||||||||||||||||||| || ||||||||| |||||||||||||| ||||||||    
T  7888775 aacactactaaaaaaacaaaaattagtgaggaaaatttagtgagggaaaacgtaaaatccctctctaactccgtcac 7888851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 165 - 239
Target Start/End: Original strand, 18413533 - 18413608
Alignment:
Q  165 taacactactaaaa-agcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtc 239  Q
    |||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||| ||||| | ||||||||||    
T  18413533 taacactactaaaaaagcaaaaattagtgagggaaatttagagagggaaaacgtgaattccctttttaattccgtc 18413608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 17079393 - 17079459
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||||||||||||||||||| ||||||||| | ||||||| | |||||||||||||||||||||||    
T  17079393 aaaaagcaaaaattagtgagggaaatttagaaagggaaaacatcaaatccctctctaattccgtcac 17079459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 33818712 - 33818646
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||||||||| |||||||| || ||||||| |||||||||||||||||||||||||    
T  33818712 aaaaaacaaaaattagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcac 33818646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 168 - 241
Target Start/End: Complemental strand, 12328384 - 12328311
Alignment:
Q  168 cactactaaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||||||| ||||||||||||||| | |||||| || ||||||| |||||| ||||||||||||||||||    
T  12328384 cactactaaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaattcctctctaattccgtcac 12328311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 166 - 241
Target Start/End: Complemental strand, 8887012 - 8886936
Alignment:
Q  166 aacactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||||||||||||  ||||||||||||||| |||||||| || |||||| || |||||||||||||||||||||||    
T  8887012 aacactactaaaaaaacaaaaattagtgagggaaatttagtgagggaaaatgtaaaatccctctctaattccgtcac 8886936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 166 - 241
Target Start/End: Original strand, 12045705 - 12045781
Alignment:
Q  166 aacactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||||||||||||  ||||||||||||||| |||||||| || ||||||||| |||||| ||||||||||||||||    
T  12045705 aacactactaaaaaaacaaaaattagtgagggaaatttagtgagggaaaacgtaaaatccttctctaattccgtcac 12045781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 175 - 234
Target Start/End: Complemental strand, 10420403 - 10420344
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaatt 234  Q
    |||||| ||||||||||||||||| |||||||| ||||||| ||||||||||||||||||    
T  10420403 aaaaagaaaaaattagtgaggaaattttagagagggaaaacatgaaatccctctctaatt 10420344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 182 - 241
Target Start/End: Original strand, 23975630 - 23975689
Alignment:
Q  182 aaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||||||||| |||||| | || |||||||||||||||||||||||||||||||||    
T  23975630 aaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcac 23975689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 167 - 241
Target Start/End: Complemental strand, 29728006 - 29727931
Alignment:
Q  167 acactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||||||||  ||||||||||||||| |||||| | || |||||||||||||| ||||||||||||||||||    
T  29728006 acactactaaaaaaacaaaaattagtgaggcaaattttgcgagggaaaacgtgaaattcctctctaattccgtcac 29727931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 618282 - 618348
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||||||||| | |||||| || ||||||| |||||||||||||||||||||||||    
T  618282 aaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcac 618348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 5982633 - 5982699
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||| |||||||||||||| || ||||||| | |||||||||||||||||||||||    
T  5982633 aaaaatcaaaaattaatgaggaaaatttagtgagggaaaacctaaaatccctctctaattccgtcac 5982699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 13974229 - 13974163
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||||||||| |||||| | || |||||||||||||||||||||| ||||||||||    
T  13974229 aaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctgattccgtcac 13974163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 15060961 - 15061027
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||||||||| |||||| | || | |||||||||||||||||||||||||||||||    
T  15060961 aaaaaacaaaaattagtgagggaaattttgtgaggaaaaacgtgaaatccctctctaattccgtcac 15061027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 16121990 - 16121924
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||||||||| | |||||| || ||||||| |||||||||||||||||||||||||    
T  16121990 aaaaaccaaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcac 16121924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 36196382 - 36196448
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||||||||| |||||| | || |||||| ||||||||||||||||||||||||||    
T  36196382 aaaaaacaaaaattagtgagggaaattttgtgagggaaaatgtgaaatccctctctaattccgtcac 36196448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 165 - 241
Target Start/End: Complemental strand, 17036574 - 17036497
Alignment:
Q  165 taacactactaaaaa-gcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||||||||||||| ||||||||| ||||||  |||||||||| ||||||||  ||||||||||||||||| |||||    
T  17036574 taacactactaaaaacgcaaaaatttgtgagggtaatttagagagggaaaacgcaaaatccctctctaattctgtcac 17036497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 175 - 236
Target Start/End: Complemental strand, 36716351 - 36716290
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattcc 236  Q
    ||||| |||||||||||||||||||||| | || |||||||||||||||| |||||||||||    
T  36716351 aaaaaacaaaaattagtgaggaaaattttgtgagggaaaacgtgaaatccttctctaattcc 36716290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 167 - 241
Target Start/End: Original strand, 23408959 - 23409034
Alignment:
Q  167 acactactaaaa-agcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||||||| | | ||| ||||||||| |||||||| || ||||||||| |||||||||||||||||||||||    
T  23408959 acactactaaaacaactaaatttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcac 23409034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 182 - 241
Target Start/End: Complemental strand, 23423900 - 23423841
Alignment:
Q  182 aaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||||||||  |||||||| || ||||||| |||||||||||||||||||||||||    
T  23423900 aaaaattagtgagtgaaatttagtgagggaaaacatgaaatccctctctaattccgtcac 23423841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 167 - 238
Target Start/End: Complemental strand, 31158712 - 31158641
Alignment:
Q  167 acactactaaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgt 238  Q
    |||||| |||||| ||||||| ||||||| ||||||||||| | |||||||||||| |||| ||||||||||    
T  31158712 acactattaaaaaacaaaaataagtgagggaaatttagagaagaaaaacgtgaaattcctccctaattccgt 31158641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 168 - 241
Target Start/End: Complemental strand, 7003886 - 7003815
Alignment:
Q  168 cactactaaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||||||| |||| |||||||||| |||||| | || ||||||||||||||  |||||||||||||||||    
T  7003886 cactactaaaaaacaaatattagtgagggaaattttgtgagggaaaacgtgaaat--ctctctaattccgtcac 7003815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 187 - 241
Target Start/End: Complemental strand, 17039770 - 17039716
Alignment:
Q  187 ttagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||||||| |||| ||| || |||||||||||||||||||||||||||||||||    
T  17039770 ttagtgagggaaatatagtgagggaaaacgtgaaatccctctctaattccgtcac 17039716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 182 - 240
Target Start/End: Complemental strand, 22649473 - 22649415
Alignment:
Q  182 aaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtca 240  Q
    |||||||| ||||  ||||||||||| |||||||||||||||| |||||||||||||||    
T  22649473 aaaaattaatgagagaaatttagagagggaaaacgtgaaatccttctctaattccgtca 22649415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 25673379 - 25673313
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||| ||||||||| |||||||| ||  |||||| |||||||||||||||||||||||||    
T  25673379 aaaaaacaaaatttagtgagggaaatttagtgacagaaaacatgaaatccctctctaattccgtcac 25673313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 36832041 - 36831975
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||||||||| |||||||| || |||||| || |||||||||||||||||| ||||    
T  36832041 aaaaaacaaaaattagtgagggaaatttagtgagggaaaatgtaaaatccctctctaattccatcac 36831975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 175 - 240
Target Start/End: Complemental strand, 2472865 - 2472800
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtca 240  Q
    ||||| ||||||||| ||||| | |||||| || ||||||| ||||||||||||||||||||||||    
T  2472865 aaaaaacaaaaattaatgagggatatttagtgagggaaaacatgaaatccctctctaattccgtca 2472800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 167 - 234
Target Start/End: Complemental strand, 3080856 - 3080788
Alignment:
Q  167 acactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaatt 234  Q
    |||||||||||||  ||||||||||||| |||||||||| || ||||||| ||||||||||||| ||||    
T  3080856 acactactaaaaaaacaaaaattagtgaagaaaatttagtgagggaaaacatgaaatccctctcaaatt 3080788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 182 - 241
Target Start/End: Complemental strand, 13620271 - 13620212
Alignment:
Q  182 aaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||||||| | |||||||| || ||||||| ||||||||||||||||||| |||||    
T  13620271 aaaaattagtgacggaaatttagtgagggaaaacatgaaatccctctctaattctgtcac 13620212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 163 - 241
Target Start/End: Original strand, 17986704 - 17986783
Alignment:
Q  163 tataacactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||| ||||||||||||  ||||||||||||||| | |||||| || ||||||| |||||| | ||||||||||||||||    
T  17986704 tatatcactactaaaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaattcttctctaattccgtcac 17986783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 241
Target Start/End: Complemental strand, 35620503 - 35620428
Alignment:
Q  167 acactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||||||||  ||||||||| ||||| | |||||| || ||||||| |||||||| ||||||||||||||||    
T  35620503 acactactaaaaaaacaaaaattaatgagggatatttagtgagggaaaacatgaaatccttctctaattccgtcac 35620428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 8109011 - 8108945
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||||||||  |||||| | || ||||||| |||||| ||||||||||||||||||    
T  8109011 aaaaaacaaaaattagtgagagaaattttgtgagggaaaacatgaaattcctctctaattccgtcac 8108945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 25652734 - 25652668
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||| || |||||| |||||||| || |||||| || |||||||||||||||||||||||    
T  25652734 aaaaaacaaaatttggtgagggaaatttagtgagggaaaatgtaaaatccctctctaattccgtcac 25652668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 183 - 241
Target Start/End: Complemental strand, 32726869 - 32726811
Alignment:
Q  183 aaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||||||||| | ||||||||||| |||||| |||||||  |||||||||||||||||    
T  32726869 aaaattagtgaaggaaatttagagagggaaaatgtgaaatttctctctaattccgtcac 32726811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 33816909 - 33816843
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||| ||||||||| |||||||| || ||||||| |||||| ||| ||||||||||||||    
T  33816909 aaaaaacaaaagttagtgagggaaatttagtgagggaaaacatgaaattcctttctaattccgtcac 33816843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 196 - 241
Target Start/End: Complemental strand, 746998 - 746953
Alignment:
Q  196 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||| |||| || |||||||||||||||||||||||||||||||||    
T  746998 aaaaattagtgagggaaaacgtgaaatccctctctaattccgtcac 746953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 182 - 241
Target Start/End: Complemental strand, 28265619 - 28265560
Alignment:
Q  182 aaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||| ||||| |||||| | || |||| |||| |||||||||||||||||||||||    
T  28265619 aaaaattaatgagggaaattttgtgagggaagacgtaaaatccctctctaattccgtcac 28265560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 241
Target Start/End: Complemental strand, 33735132 - 33735058
Alignment:
Q  166 aacactactaaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||||| |||||| |||||||||||| || ||||||| ||| | ||||| ||||| |||||| ||||||||||||    
T  33735132 aacactagtaaaaaacaaaaattagtgggggaaatttataga-gaaaaacatgaaacccctctttaattccgtcac 33735058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 196 - 241
Target Start/End: Original strand, 10494746 - 10494791
Alignment:
Q  196 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||| |||| || ||||||||| |||||||||||||||||||||||    
T  10494746 aaaaattagtgagggaaaacgtaaaatccctctctaattccgtcac 10494791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 196 - 241
Target Start/End: Complemental strand, 16632004 - 16631959
Alignment:
Q  196 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||| |||| || ||||||||| |||||||||||||||||||||||    
T  16632004 aaaaattagtgaaggaaaacgtaaaatccctctctaattccgtcac 16631959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 196 - 241
Target Start/End: Complemental strand, 25397918 - 25397873
Alignment:
Q  196 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||| |||| || ||||||| |||||||||||||||||||||||||    
T  25397918 aaaaattagtgagggaaaacatgaaatccctctctaattccgtcac 25397873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 196 - 241
Target Start/End: Original strand, 40484053 - 40484098
Alignment:
Q  196 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||| |||| || ||||||||| |||||||||||||||||||||||    
T  40484053 aaaaattagtgagggaaaacgtaaaatccctctctaattccgtcac 40484098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 241
Target Start/End: Complemental strand, 24138970 - 24138926
Alignment:
Q  197 aaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||| || ||||||||| ||||| |||||||||||||||||    
T  24138970 aaatttagtgagggaaaacgtaaaatctctctctaattccgtcac 24138926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 241
Target Start/End: Complemental strand, 26708714 - 26708670
Alignment:
Q  197 aaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||| || ||||||||| |||| ||||||||||||||||||    
T  26708714 aaatttagtgagggaaaacgtaaaattcctctctaattccgtcac 26708670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 241
Target Start/End: Complemental strand, 26978448 - 26978404
Alignment:
Q  197 aaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||| || ||||||||| |||| ||||||||||||||||||    
T  26978448 aaatttagtgagggaaaacgtaaaattcctctctaattccgtcac 26978404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 2e-23; HSPs: 53)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 162 - 240
Target Start/End: Complemental strand, 12680349 - 12680270
Alignment:
Q  162 atataacactactaaaaa-gcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtca 240  Q
    ||||| |||||||||||| | |||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  12680349 atatagcactactaaaaaagaaaaaattagtgaggaaaatttagagagggaaaacgtgaaattcctctctaattccgtca 12680270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 12844991 - 12845057
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||| |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  12844991 aaaaagaaaaaattagtgaggaaaatttagagagggaaaacgtgaaatctctctctaattccgtcac 12845057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 167 - 241
Target Start/End: Original strand, 9892942 - 9893017
Alignment:
Q  167 acactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||||||||  ||||||||||||||| |||||||| || |||||||||||||||||||||||||||||||||    
T  9892942 acactactaaaaaaacaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtcac 9893017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 167 - 241
Target Start/End: Complemental strand, 21990333 - 21990259
Alignment:
Q  167 acactactaaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||||||||   |||||||||||||||||||||| || ||||||||| |||||||||||||||||||||||    
T  21990333 acactactaaaaaaacaaaattagtgaggaaaatttagtgagggaaaacgtaaaatccctctctaattccgtcac 21990259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 165 - 241
Target Start/End: Original strand, 28364888 - 28364965
Alignment:
Q  165 taacactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||||||||||  ||||||||||||||| |||||||| || ||||||||| |||||||||||||||||||||||    
T  28364888 taacactactaaaaaaacaaaaattagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcac 28364965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 168 - 240
Target Start/End: Original strand, 14036601 - 14036673
Alignment:
Q  168 cactactaaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtca 240  Q
    |||||||||||| ||||||||||||||| |||||| | || ||||||||||||||||||||||||||| ||||    
T  14036601 cactactaaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattctgtca 14036673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 166 - 241
Target Start/End: Original strand, 27705400 - 27705476
Alignment:
Q  166 aacactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||||||||||||  ||||||||||||||| |||||| | || |||||||||||||||||||||||||||||||||    
T  27705400 aacactactaaaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcac 27705476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 166 - 240
Target Start/End: Complemental strand, 12351747 - 12351672
Alignment:
Q  166 aacactactaaaaa-gcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtca 240  Q
    |||||||||||||| | |||||||||||||| ||||||||||| ||||||||||||||  ||||||||||||||||    
T  12351747 aacactactaaaaaagtaaaaattagtgagggaaatttagagagggaaaacgtgaaatttctctctaattccgtca 12351672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 167 - 241
Target Start/End: Original strand, 20182124 - 20182199
Alignment:
Q  167 acactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||||||||  ||||||||||||||| |||||| | || |||||||||||||||||||||||||||||||||    
T  20182124 acactactaaaaaatcaaaaattagtgaggcaaattttgtgagggaaaacgtgaaatccctctctaattccgtcac 20182199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 167 - 241
Target Start/End: Complemental strand, 22153867 - 22153792
Alignment:
Q  167 acactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||||||||  ||||||||||||||| |||||| | || |||||||||||||||||||||||||||||||||    
T  22153867 acactactaaaaaatcaaaaattagtgaggcaaattttgtgagggaaaacgtgaaatccctctctaattccgtcac 22153792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 167 - 241
Target Start/End: Complemental strand, 22579509 - 22579434
Alignment:
Q  167 acactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||||||||  ||||||||||||||| |||||| | || |||||||||||||||||||||||||||||||||    
T  22579509 acactactaaaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcac 22579434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 168 - 234
Target Start/End: Original strand, 9885224 - 9885290
Alignment:
Q  168 cactactaaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaatt 234  Q
    |||||||||||||||||||||||||| |||||||||| || ||||||| |||||||||||| |||||    
T  9885224 cactactaaaaagcaaaaattagtgacgaaaatttagtgagggaaaacatgaaatccctctttaatt 9885290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 14886549 - 14886615
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| |||||||||||||||||||||||| || ||||||| | |||||||||||||||||||||||    
T  14886549 aaaaaacaaaaattagtgaggaaaatttagtgagggaaaacatcaaatccctctctaattccgtcac 14886615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 21140927 - 21140993
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||||||||| |||||| | || |||||||||||||||||||||||||||||||||    
T  21140927 aaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcac 21140993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 21691647 - 21691581
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||||||||||||||||||| || |||||||| | |||||||||||||||||||||||| ||||||    
T  21691647 aaaaagcaaaaattagtgagggaattttagagaggaaaaacgtgaaatccctctctaatttcgtcac 21691581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 22083826 - 22083892
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||||||||| |||||||| || ||||||| |||||||||||||||||||||||||    
T  22083826 aaaaaacaaaaattagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcac 22083892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 175 - 240
Target Start/End: Original strand, 12951696 - 12951761
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtca 240  Q
    ||||| ||||||||||||||| |||||||| || ||||||| ||||||||||||||||||||||||    
T  12951696 aaaaaacaaaaattagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtca 12951761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 182 - 241
Target Start/End: Original strand, 11530220 - 11530279
Alignment:
Q  182 aaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||||||||||||||||||||| || ||||||| |||||||| ||||||||||||||||    
T  11530220 aaaaattagtgaggaaaatttagtgagggaaaacatgaaatccatctctaattccgtcac 11530279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 167 - 241
Target Start/End: Complemental strand, 15364618 - 15364543
Alignment:
Q  167 acactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||||||||  ||||||||||||||| |||||||| || ||||||||| |||||| ||||||||||||||||    
T  15364618 acactactaaaaaaacaaaaattagtgagggaaatttagtgagggaaaacgtaaaatccttctctaattccgtcac 15364543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 182 - 241
Target Start/End: Original strand, 25397997 - 25398056
Alignment:
Q  182 aaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||||||||| |||||||| || ||||||||| |||||||||||||||||||||||    
T  25397997 aaaaattagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcac 25398056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 2992603 - 2992669
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||||||||| | |||||| || ||||||| |||||||||||||||||||||||||    
T  2992603 aaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcac 2992669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 5270380 - 5270446
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||| |||||||||||||| || |||||||| |||||| ||||||| ||||||||||||||||||    
T  5270380 aaaaagtaaaaattagtgagggaattttagagagggaaaatgtgaaattcctctctaattccgtcac 5270446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 6598452 - 6598518
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||||||||| | |||||| || ||||||| |||||||||||||||||||||||||    
T  6598452 aaaaaacaaaaattagtgagggatatttagtgagggaaaacttgaaatccctctctaattccgtcac 6598518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 18033676 - 18033610
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||||||||| |||||||  || ||||||| |||||||||||||||||||||||||    
T  18033676 aaaaaacaaaaattagtgagggaaatttaatgagggaaaacatgaaatccctctctaattccgtcac 18033610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 27796985 - 27796919
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||||||||| | |||||| || ||||||| |||||||||||||||||||||||||    
T  27796985 aaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcac 27796919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 167 - 240
Target Start/End: Complemental strand, 1939401 - 1939328
Alignment:
Q  167 acactactaaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtca 240  Q
    ||||||||||||| ||||||||||||||| | ||| || ||  |||||| ||||||||||||||||||||||||    
T  1939401 acactactaaaaaacaaaaattagtgagggatattcagtgagagaaaacatgaaatccctctctaattccgtca 1939328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 168 - 241
Target Start/End: Complemental strand, 12157534 - 12157461
Alignment:
Q  168 cactactaaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||||||||||||||||| ||||||||||||||||||||   ||||  |||||||  ||||||||||||||||    
T  12157534 cactactaaaaagcaaaaactagtgaggaaaatttagagagcaaaaatatgaaatcattctctaattccgtcac 12157461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 182 - 241
Target Start/End: Original strand, 23281781 - 23281840
Alignment:
Q  182 aaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||||||| |||| |||||| | || |||||||||||||||||||||||||||||||||    
T  23281781 aaaaattagggagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcac 23281840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 167 - 241
Target Start/End: Original strand, 26224407 - 26224482
Alignment:
Q  167 acactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||||||||  |||||||||| |||| | |||||| || ||||||| |||||||||||||||||||||||||    
T  26224407 acactactaaaaaaacaaaaattagcgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcac 26224482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 12160997 - 12160931
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||||||||||| |||||| || ||||||| | |||||||||||||||| ||||||    
T  12160997 aaaaaacaaaaattagtgaggaatatttagtgagggaaaacataaaatccctctctaatttcgtcac 12160931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 167 - 241
Target Start/End: Complemental strand, 16250961 - 16250887
Alignment:
Q  167 acactactaaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||||||||  |||||||||||||  |||||| | || ||||||||||||||| ||||||||||| |||||    
T  16250961 acactactaaaaaataaaaattagtgagagaaattttgtgagggaaaacgtgaaatctctctctaattctgtcac 16250887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 26939575 - 26939641
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||||||||  | |||||| || ||||||| |||||||||||||||||||||||||    
T  26939575 aaaaaacaaaaattagtgagagatatttagtgagggaaaacatgaaatccctctctaattccgtcac 26939641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 177 - 234
Target Start/End: Complemental strand, 3619692 - 3619635
Alignment:
Q  177 aaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaatt 234  Q
    |||| ||||||||| ||| |||||||||||||| ||||||| ||||||||||||||||    
T  3619692 aaagaaaaaattagcgagaaaaatttagagatgaaaaacgttaaatccctctctaatt 3619635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 175 - 240
Target Start/End: Complemental strand, 24661160 - 24661095
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtca 240  Q
    ||||| ||||||||||||||| | |||||| || ||||||| ||||||| ||||||||||||||||    
T  24661160 aaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaatctctctctaattccgtca 24661095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 166 - 241
Target Start/End: Original strand, 2669287 - 2669363
Alignment:
Q  166 aacactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||||||||||||  ||||||||||||||| |||||||| |  | ||||||| |||| ||||||||||||||||||    
T  2669287 aacactactaaaaaaacaaaaattagtgagggaaatttagtgtggaaaaacgtaaaattcctctctaattccgtcac 2669363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 182 - 241
Target Start/End: Complemental strand, 343707 - 343648
Alignment:
Q  182 aaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||||||||| |||||||  || ||||||||| ||||||||||||||||| |||||    
T  343707 aaaaattagtgagggaaatttaatgagggaaaacgtaaaatccctctctaattctgtcac 343648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 241
Target Start/End: Complemental strand, 11049911 - 11049836
Alignment:
Q  167 acactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||||||||  ||||||||||||||  | |||||| || ||||||| ||||||| |||||||||||||||||    
T  11049911 acactactaaaaaaacaaaaattagtgagagatatttagtgagggaaaacatgaaatctctctctaattccgtcac 11049836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 241
Target Start/End: Complemental strand, 12205321 - 12205270
Alignment:
Q  190 gtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||||||||  ||| ||||||||||||||||||| |||||||||||||    
T  12205321 gtgaggaaaattttaagagggaaaacgtgaaatccctcactaattccgtcac 12205270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 187 - 241
Target Start/End: Complemental strand, 495766 - 495712
Alignment:
Q  187 ttagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||||||| |||||||| || ||||||||| ||||| |||||||||||||||||    
T  495766 ttagtgagggaaatttagtgagggaaaacgtaaaatcactctctaattccgtcac 495712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 12200682 - 12200748
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||||||||| | |||||| || ||||||  |||||||||||||||||||| ||||    
T  12200682 aaaaaacaaaaattagtgagggatatttagtgagggaaaatatgaaatccctctctaattccctcac 12200748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 18492357 - 18492423
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||||||||  |||||| |  | ||||||||||||||||| |||||||||||||||    
T  18492357 aaaaaacaaaaattagtgagagaaattttgtaagggaaaacgtgaaatcccactctaattccgtcac 18492423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 175 - 236
Target Start/End: Complemental strand, 22055763 - 22055702
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattcc 236  Q
    ||||| ||||||||||||||| || ||||| || | ||||| ||||||||||||||||||||    
T  22055763 aaaaaccaaaaattagtgagggaagtttagtgaggaaaaacatgaaatccctctctaattcc 22055702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 240
Target Start/End: Original strand, 2396180 - 2396256
Alignment:
Q  165 taacactactaaaa-agcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtca 240  Q
    |||||||||||||| | ||||||||||| |||||||||||||||   ||||||||||||  ||||||  ||||||||    
T  2396180 taacactactaaaataacaaaaattagtaaggaaaatttagagagcaaaaacgtgaaatttctctctgtttccgtca 2396256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 241
Target Start/End: Complemental strand, 11431793 - 11431725
Alignment:
Q  173 ctaaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||  |||| ||||||||| ||||||||||| | |||||| || |||||||| ||||||||||||    
T  11431793 ctaaaaaataaaatttagtgagggaaatttagagaggaaaaacgcgatatccctctttaattccgtcac 11431725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 235
Target Start/End: Original strand, 18048768 - 18048836
Alignment:
Q  168 cactactaaaaagcaaaa-attagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattc 235  Q
    |||||||||||| ||||| |||||||||| |||||||| || | ||||| ||||||||||| |||||||    
T  18048768 cactactaaaaaacaaaaaattagtgagggaaatttagtgaggaaaaacatgaaatccctccctaattc 18048836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 6978267 - 6978331
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||||||||| | |||||| ||  |||||| |||||| ||||||||||||||||||    
T  6978267 aaaaaacaaaaattagtgagggatatttagtga--gaaaacatgaaattcctctctaattccgtcac 6978331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 197 - 240
Target Start/End: Original strand, 15448395 - 15448438
Alignment:
Q  197 aaatttagagatggaaaacgtgaaatccctctctaattccgtca 240  Q
    |||||||| || ||||||||| ||||||||||||||||||||||    
T  15448395 aaatttagtgagggaaaacgtaaaatccctctctaattccgtca 15448438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 17919524 - 17919590
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||||||||| |||| ||  || |||||  || |||||||||||||||||||||||    
T  17919524 aaaaaacaaaaattagtgagggaaatgtaatgagggaaactgtaaaatccctctctaattccgtcac 17919590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 33250859 - 33250793
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||||||||  | |||||| || ||||||| |||||| ||||||||||||| ||||    
T  33250859 aaaaaacaaaaattagtgagagatatttagtgagggaaaacatgaaattcctctctaattccatcac 33250793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 196 - 241
Target Start/End: Complemental strand, 5192319 - 5192274
Alignment:
Q  196 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||| |||| || ||||||||| |||||||||||||||||||||||    
T  5192319 aaaaattagtgagggaaaacgtaaaatccctctctaattccgtcac 5192274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 183 - 236
Target Start/End: Complemental strand, 13668137 - 13668084
Alignment:
Q  183 aaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattcc 236  Q
    |||||| |||| | ||||||||||| |||||||||||||| || ||||||||||    
T  13668137 aaaattggtgaaggaaatttagagagggaaaacgtgaaattcccctctaattcc 13668084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 196 - 241
Target Start/End: Original strand, 14872128 - 14872173
Alignment:
Q  196 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||| |||| || ||||||| |||||||||||||||||||||||||    
T  14872128 aaaaattagtgagggaaaacatgaaatccctctctaattccgtcac 14872173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 240
Target Start/End: Original strand, 16118135 - 16118199
Alignment:
Q  176 aaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtca 240  Q
    |||| |||||||||||||| ||||||||  || ||| ||| ||||||| |||||||||| |||||    
T  16118135 aaaaacaaaaattagtgagaaaaatttaatgagggagaacatgaaatctctctctaatttcgtca 16118199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 56; Significance: 2e-23; HSPs: 59)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 178 - 241
Target Start/End: Complemental strand, 14486780 - 14486717
Alignment:
Q  178 aagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  14486780 aagcaaaaattagtgaggaaaatttagagagggaaaacgtgaaatctctctctaattccgtcac 14486717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 13523112 - 13523046
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||||||||||||||||||| || |||||||| |||||||||||||||||||||||||||||||||    
T  13523112 aaaaagcaaaaattagtgagggaattttagagagggaaaacgtgaaatccctctctaattccgtcac 13523046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 19081716 - 19081782
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||||||||||||||||||| || |||||||| ||||||||||||||||||||||||||| |||||    
T  19081716 aaaaagcaaaaattagtgagggaattttagagagggaaaacgtgaaatccctctctaattctgtcac 19081782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 19129604 - 19129670
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||||||||||||||||||| || |||||||| ||||||||||||||||||||||||||| |||||    
T  19129604 aaaaagcaaaaattagtgagggaattttagagagggaaaacgtgaaatccctctctaattctgtcac 19129670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 167 - 241
Target Start/End: Original strand, 15243064 - 15243139
Alignment:
Q  167 acactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||||||||  ||||||||||||||| |||||||| || |||||||||||||||||| ||||||||||||||    
T  15243064 acactactaaaaaatcaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctatctaattccgtcac 15243139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 167 - 241
Target Start/End: Complemental strand, 22789751 - 22789676
Alignment:
Q  167 acactactaaaaa-gcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||||||||||| |||||||||||||||| ||||||||||| ||||||||||||||| || |||||||| |||||    
T  22789751 acactactaaaaaagcaaaaattagtgagggaaatttagagagggaaaacgtgaaatctctatctaattcagtcac 22789676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 167 - 241
Target Start/End: Complemental strand, 38531330 - 38531255
Alignment:
Q  167 acactactaaaaa-gcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||||||||||| | |||||||||||||| ||||||||||| ||||||||||||||| |||||||||||| ||||    
T  38531330 acactactaaaaaagtaaaaattagtgagggaaatttagagagggaaaacgtgaaatctctctctaattccatcac 38531255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 9464091 - 9464157
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||||||||| |||||| | || |||||||||||||||||||||||||||||||||    
T  9464091 aaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcac 9464157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 12161802 - 12161868
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||||||||| |||||| | || |||||||||||||||||||||||||||||||||    
T  12161802 aaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcac 12161868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 168 - 238
Target Start/End: Complemental strand, 16913735 - 16913665
Alignment:
Q  168 cactactaaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgt 238  Q
    ||||||||||||   ||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||    
T  16913735 cactactaaaaaaacaaaattagtgagggaaatttagagagggaaaacatgaaatccctctctaattccgt 16913665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 18895051 - 18894985
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| |||||||||||||||||||||||| || ||||||| |||||||||||||||||| ||||||    
T  18895051 aaaaaacaaaaattagtgaggaaaatttagtgagggaaaacatgaaatccctctctaatttcgtcac 18894985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 22158790 - 22158856
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||||||||| |||||| | || |||||||||||||||||||||||||||||||||    
T  22158790 aaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcac 22158856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 23457885 - 23457951
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||||||||| |||||| | || |||||||||||||||||||||||||||||||||    
T  23457885 aaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcac 23457951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 41071986 - 41071920
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||||||||| |||||||| || ||||||||| |||||||||||||||||||||||    
T  41071986 aaaaaacaaaaattagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcac 41071920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 50845481 - 50845415
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| |||||||||||| ||||||||||| || ||||||| |||||||||||||||||||||||||    
T  50845481 aaaaaacaaaaattagtgtggaaaatttagtgagggaaaacatgaaatccctctctaattccgtcac 50845415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 52183666 - 52183732
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||||||||| |||||| | || |||||||||||||||||||||||||||||||||    
T  52183666 aaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcac 52183732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 175 - 236
Target Start/End: Original strand, 46865231 - 46865292
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattcc 236  Q
    ||||||||||||||||||||| ||||| ||||| ||| ||||||||||||||||||||||||    
T  46865231 aaaaagcaaaaattagtgagggaaattcagagagggagaacgtgaaatccctctctaattcc 46865292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 181 - 241
Target Start/End: Complemental strand, 16258631 - 16258571
Alignment:
Q  181 caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||||||||||||||||||||||||| | ||||||||||| |||||| ||||||||||||    
T  16258631 caaaaattagtgaggaaaatttagagaggaaaaacgtgaaaaccctctataattccgtcac 16258571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 169 - 241
Target Start/End: Original strand, 41063179 - 41063251
Alignment:
Q  169 actactaaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||||||||| |||||||||||||||||||||||| || | ||||| | ||||| |||||||||||||||||    
T  41063179 actactaaaaaacaaaaattagtgaggaaaatttagtgaggaaaaacataaaatctctctctaattccgtcac 41063251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 168 - 238
Target Start/End: Complemental strand, 20408319 - 20408248
Alignment:
Q  168 cactacta-aaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgt 238  Q
    |||||||| |||| ||||||||||||||| |||||| | || ||||||||||||||||||||||||||||||    
T  20408319 cactactataaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgt 20408248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 6459205 - 6459271
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||||||||| | |||||| || ||||||| |||||||||||||||||||||||||    
T  6459205 aaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcac 6459271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 9110126 - 9110060
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||||||||| | |||||| || ||||||| |||||||||||||||||||||||||    
T  9110126 aaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcac 9110060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 12989840 - 12989906
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||||||||||||||||||| |||||| |||| ||||||||||||||| ||| ||||||| |||||    
T  12989840 aaaaagcaaaaattagtgagggaaattttgagagggaaaacgtgaaatctctccctaattcagtcac 12989906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 14760855 - 14760921
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||||||||| |||||||| || ||||||| ||||||||||| |||||||||||||    
T  14760855 aaaaaacaaaaattagtgagggaaatttagtgagggaaaacatgaaatccctcactaattccgtcac 14760921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 22603536 - 22603602
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||||||||| |||||||| || ||||||||| ||||| |||||||||||||||||    
T  22603536 aaaaaacaaaaattagtgagggaaatttagtgagggaaaacgtaaaatcgctctctaattccgtcac 22603602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 41752421 - 41752487
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||||||||| | |||||| || ||||||| |||||||||||||||||||||||||    
T  41752421 aaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcac 41752487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 45839280 - 45839346
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||||||||| | |||||| || ||||||| |||||||||||||||||||||||||    
T  45839280 aaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcac 45839346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 168 - 241
Target Start/End: Original strand, 26825221 - 26825294
Alignment:
Q  168 cactactaaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||||||||||  |||||||||  ||| || |||||||| |||||||||||||| ||||||||||||||||||    
T  26825221 cactactaaaaaagaaaaattagcaagggaattttagagagggaaaacgtgaaattcctctctaattccgtcac 26825294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 175 - 236
Target Start/End: Complemental strand, 29093705 - 29093644
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattcc 236  Q
    |||||| |||||||||||||| |||||||||||||||||| || |||| |||||||||||||    
T  29093705 aaaaagtaaaaattagtgagggaaatttagagatggaaaatgtaaaattcctctctaattcc 29093644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 182 - 241
Target Start/End: Original strand, 12720804 - 12720863
Alignment:
Q  182 aaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||||||||| | |||||| || ||||||| |||||||||||||||||||||||||    
T  12720804 aaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcac 12720863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 241
Target Start/End: Original strand, 13102295 - 13102370
Alignment:
Q  166 aacactactaaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||| ||||| ||||||||||||||| |||||||| || ||||||| | ||||| || ||||||||||||||    
T  13102295 aacactacaaaaaaacaaaaattagtgagggaaatttagtgagggaaaacataaaatctctttctaattccgtcac 13102370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 174 - 241
Target Start/End: Original strand, 17661037 - 17661104
Alignment:
Q  174 taaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||| ||||||||||||||| |||||| | || |||||||||||||| ||||||||||||| ||||    
T  17661037 taaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaattcctctctaattccatcac 17661104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 175 - 234
Target Start/End: Original strand, 20580897 - 20580956
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaatt 234  Q
    |||||| |||||||||||||  || |||||||| ||||||||||||||||||||||||||    
T  20580897 aaaaagtaaaaattagtgagagaattttagagagggaaaacgtgaaatccctctctaatt 20580956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 6412204 - 6412138
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||||||||| | |||||| || ||||||| |||||||||||| ||||||||||||    
T  6412204 aaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaatccctctttaattccgtcac 6412138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 9259334 - 9259268
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| |||| |||||||||| |||||| | || ||||||||||||||| |||||||||||||||||    
T  9259334 aaaaaacaaatattagtgagggaaattttgtgagggaaaacgtgaaatctctctctaattccgtcac 9259268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 167 - 240
Target Start/End: Complemental strand, 9985487 - 9985413
Alignment:
Q  167 acactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtca 240  Q
    |||||||||||||  ||||||||||||||| |||||| | || | ||||||| ||||||||||||||||||||||    
T  9985487 acactactaaaaacacaaaaattagtgagggaaattttgtgaggaaaaacgtaaaatccctctctaattccgtca 9985413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 11917774 - 11917840
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||||||||  || |||||||| |||||||||||| ||||| ||||||||||||||    
T  11917774 aaaaaacaaaaattagtgagataagtttagagagggaaaacgtgaactccctttctaattccgtcac 11917840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 13195571 - 13195637
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||||||||| |||||| ||||||||||| |||||| |  ||||||||||||||||| |||||    
T  13195571 aaaaagcaaaaatttgtgagggaaatttagagagggaaaatgcaaaatccctctctaattctgtcac 13195637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 187 - 241
Target Start/End: Original strand, 29549418 - 29549472
Alignment:
Q  187 ttagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||||||| |||||||| || ||||||||| |||||||||||||||||||||||    
T  29549418 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcac 29549472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 165 - 241
Target Start/End: Complemental strand, 7181717 - 7181640
Alignment:
Q  165 taacactactaaaaagcaaaa-attagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||||||||||   ||| |||||||||| |||||| |  | |||||||||||||||||||||||||||||||||    
T  7181717 taacactactaaaaaaataaatattagtgagggaaattttgtaagggaaaacgtgaaatccctctctaattccgtcac 7181640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 182 - 238
Target Start/End: Complemental strand, 18890693 - 18890637
Alignment:
Q  182 aaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgt 238  Q
    |||||||||||||| |||||| | ||  |||||||||||||||||||||||||||||    
T  18890693 aaaaattagtgagggaaattttgtgagagaaaacgtgaaatccctctctaattccgt 18890637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 182 - 241
Target Start/End: Original strand, 7830026 - 7830085
Alignment:
Q  182 aaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||||||||| |||||||| || ||||||| ||||||||||| |||||| ||||||    
T  7830026 aaaaattagtgagggaaatttagtgagggaaaacatgaaatccctccctaatttcgtcac 7830085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 234
Target Start/End: Complemental strand, 18788061 - 18788002
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaatt 234  Q
    ||||||||||||||||||||| ||||||| ||| ||||||||||| |||  |||||||||    
T  18788061 aaaaagcaaaaattagtgagggaaatttaaagagggaaaacgtgacatcaatctctaatt 18788002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 235
Target Start/End: Complemental strand, 30928536 - 30928469
Alignment:
Q  168 cactactaaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattc 235  Q
    |||||||||||| |||||||||||||||||||||||  ||  |||||| ||||||  |||||||||||    
T  30928536 cactactaaaaaacaaaaattagtgaggaaaatttactgagtgaaaacatgaaatttctctctaattc 30928469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 12370092 - 12370026
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||||||||| ||||||||  | ||||||| | |||||| ||||||||||||||||    
T  12370092 aaaaaacaaaaattagtgagggaaatttagtaagggaaaacataaaatccttctctaattccgtcac 12370026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 175 - 236
Target Start/End: Complemental strand, 17734105 - 17734044
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattcc 236  Q
    ||||| ||||||||||||||| |||||||| || ||||||| ||||||| ||| ||||||||    
T  17734105 aaaaaacaaaaattagtgagggaaatttagtgagggaaaacatgaaatctctcgctaattcc 17734044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 241
Target Start/End: Original strand, 4340417 - 4340461
Alignment:
Q  197 aaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||| || ||||||||| |||||||||||||||||||||||    
T  4340417 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcac 4340461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 223
Target Start/End: Complemental strand, 13295087 - 13295039
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatc 223  Q
    ||||||||||||||||| | | ||||||||||| |||||||||||||||    
T  13295087 aaaaagcaaaaattagtaacggaaatttagagagggaaaacgtgaaatc 13295039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 241
Target Start/End: Complemental strand, 41120866 - 41120822
Alignment:
Q  197 aaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||| || ||||||||| |||||||||||||||||||||||    
T  41120866 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcac 41120822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 197 - 240
Target Start/End: Complemental strand, 46786087 - 46786044
Alignment:
Q  197 aaatttagagatggaaaacgtgaaatccctctctaattccgtca 240  Q
    |||||||| || ||||||||| ||||||||||||||||||||||    
T  46786087 aaatttagtgagggaaaacgtaaaatccctctctaattccgtca 46786044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 20290471 - 20290405
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||||||||  |||||| | ||  ||||||||||||||  ||||||||||||||||    
T  20290471 aaaaaacaaaaattagtgagagaaattttgtgagagaaaacgtgaaatcattctctaattccgtcac 20290405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 52621142 - 52621208
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| |||||||||||||||||||||||| || | ||||| |||||| | || |||||||| ||||    
T  52621142 aaaaaacaaaaattagtgaggaaaatttagtgaggaaaaacatgaaattcttcactaattccatcac 52621208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 196 - 241
Target Start/End: Original strand, 19865253 - 19865298
Alignment:
Q  196 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||| |||| || ||||||| |||||||||||||||||||||||||    
T  19865253 aaaaattagtgagggaaaacatgaaatccctctctaattccgtcac 19865298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 237
Target Start/End: Original strand, 32046853 - 32046926
Alignment:
Q  165 taacactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccg 237  Q
    |||||||||||||||  | ||| ||||||||| |||| ||| || ||||||||| ||||| |||||||||||||    
T  32046853 taacactactaaaaaaactaaatttagtgagggaaatatagtgagggaaaacgtaaaatctctctctaattccg 32046926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 241
Target Start/End: Complemental strand, 50092456 - 50092383
Alignment:
Q  168 cactactaaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||||||||||   |||| ||| |||  |||||| | || ||||||| |||||||||||||||||||||||||    
T  50092456 cactactaaaaaaacaaaaatagggagagaaattttgtgagggaaaacatgaaatccctctctaattccgtcac 50092383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 241
Target Start/End: Complemental strand, 6091385 - 6091341
Alignment:
Q  197 aaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||||||||||||||||||| |||| ||| |||||||| |||||    
T  6091385 aaatttagagatggaaaacgtaaaattcctatctaattctgtcac 6091341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 241
Target Start/End: Complemental strand, 12174903 - 12174851
Alignment:
Q  189 agtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||||| | |||||| || ||||||| |||||||| ||||||||||||||||    
T  12174903 agtgagggatatttagtgagggaaaacatgaaatccttctctaattccgtcac 12174851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 207
Target Start/End: Complemental strand, 27253989 - 27253957
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagaga 207  Q
    ||||||||||||||||||||| |||||||||||    
T  27253989 aaaaagcaaaaattagtgagggaaatttagaga 27253957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 30673502 - 30673542
Alignment:
Q  195 gaaaatttagagatggaaaacgtgaaatccctctctaattc 235  Q
    |||||||||| || ||||||| |||||||||||||||||||    
T  30673502 gaaaatttagtgagggaaaacatgaaatccctctctaattc 30673542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 4e-22; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 168 - 241
Target Start/End: Original strand, 8430273 - 8430346
Alignment:
Q  168 cactactaaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||||||| ||||||||||||||| |||||| | || |||||||||||||||||||||||||||||||||    
T  8430273 cactactaaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcac 8430346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 167 - 241
Target Start/End: Original strand, 41637593 - 41637668
Alignment:
Q  167 acactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||||||||  |||||||||||||||||||||||| || ||||||| |||||||||||||||||||||||||    
T  41637593 acactactaaaaaaacaaaaattagtgaggaaaatttagtgagggaaaacatgaaatccctctctaattccgtcac 41637668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 169 - 241
Target Start/End: Complemental strand, 23388535 - 23388463
Alignment:
Q  169 actactaaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||||||  |||||||||||||| |||||| | || |||||||||||||||||||||||||||||||||    
T  23388535 actactaaaaaataaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcac 23388463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 166 - 241
Target Start/End: Complemental strand, 26687851 - 26687776
Alignment:
Q  166 aacactactaaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||||||||| ||||||||||||||  |||||||| || ||||||| |||||||| ||||||||||||||||    
T  26687851 aacactactaaaaaacaaaaattagtgagcgaaatttagtgacggaaaacatgaaatccatctctaattccgtcac 26687776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 167 - 241
Target Start/End: Complemental strand, 29749563 - 29749488
Alignment:
Q  167 acactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||||||||  |||||||||||||||||||||||| || ||||||| ||||||||||| |||||||||||||    
T  29749563 acactactaaaaaaacaaaaattagtgaggaaaatttagtgagggaaaacatgaaatccctccctaattccgtcac 29749488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 167 - 241
Target Start/End: Complemental strand, 29998719 - 29998644
Alignment:
Q  167 acactactaaaaa-gcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||||||||||| | |||||||||||||| || |||||||| |||||||||||||||| ||||||||||||||||    
T  29998719 acactactaaaaaagtaaaaattagtgagggaattttagagaaggaaaacgtgaaatccttctctaattccgtcac 29998644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 167 - 241
Target Start/End: Original strand, 32185807 - 32185882
Alignment:
Q  167 acactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||||||||  ||||||||||||||| |||||| | || |||||||||||||||||||||||||||||||||    
T  32185807 acactactaaaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcac 32185882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 30783322 - 30783388
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||||||||| |||||||| || ||||||| |||||||||||||||||||||||||    
T  30783322 aaaaaacaaaaattagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcac 30783388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 31266338 - 31266404
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||||||||| |||||||| || ||||||| |||||||||||||||||||||||||    
T  31266338 aaaaatcaaaaattagtgagggaaatttagcgagggaaaacatgaaatccctctctaattccgtcac 31266404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 32300435 - 32300501
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||||||||| |||||| | || |||||||||||||||||||||||||||||||||    
T  32300435 aaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcac 32300501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 165 - 241
Target Start/End: Complemental strand, 13788217 - 13788140
Alignment:
Q  165 taacactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||||||||||  |||||||||||||||||||||||| || |||||| || |||||||||||||||| ||||||    
T  13788217 taacactactaaaaaaacaaaaattagtgaggaaaatttagtgagggaaaatgtaaaatccctctctaatttcgtcac 13788140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 168 - 241
Target Start/End: Complemental strand, 18551411 - 18551338
Alignment:
Q  168 cactactaaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||||||| ||||||||||||||| | |||||| || ||||||| | |||||||||||||||||||||||    
T  18551411 cactactaaaaaacaaaaattagtgagggatatttagtgagggaaaacataaaatccctctctaattccgtcac 18551338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 165 - 241
Target Start/End: Original strand, 27522984 - 27523061
Alignment:
Q  165 taacactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||||||||||  ||||||||||||||| | |||||| || ||||||| |||||||||||||||||||||||||    
T  27522984 taacactactaaaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcac 27523061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 167 - 241
Target Start/End: Complemental strand, 15636895 - 15636820
Alignment:
Q  167 acactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||||||||  ||||||||||||||| |||||| | || |||||||||||||||||||||||||| ||||||    
T  15636895 acactactaaaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaatttcgtcac 15636820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 182 - 241
Target Start/End: Original strand, 28262355 - 28262414
Alignment:
Q  182 aaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||||||||| |||||| | || |||||||||||||||||||||||||||||||||    
T  28262355 aaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcac 28262414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 1141520 - 1141586
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||||||||| |||||| | || ||||||||||||||||||||||||||| |||||    
T  1141520 aaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattctgtcac 1141586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 21293862 - 21293796
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||||||||| |||||| | || ||||||||||||||| |||||||||||||||||    
T  21293862 aaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaatctctctctaattccgtcac 21293796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 22140515 - 22140449
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||||||||| |||||| | ||  ||||||||||||||||||||||||||||||||    
T  22140515 aaaaaacaaaaattagtgagggaaattttgtgaaagaaaacgtgaaatccctctctaattccgtcac 22140449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 41736156 - 41736222
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| |||||||||||||||||||||||| || |||||| || |||||||||||||||| ||||||    
T  41736156 aaaaaacaaaaattagtgaggaaaatttagtgagggaaaatgtaaaatccctctctaatttcgtcac 41736222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 234
Target Start/End: Complemental strand, 13134778 - 13134712
Alignment:
Q  166 aacactactaaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaatt 234  Q
    |||||||| |||||  ||||||||||||| |||||||||||||||||||| |||||||||| |||||||    
T  13134778 aacactacaaaaaa--aaaaattagtgagaaaaatttagagatggaaaacttgaaatccctttctaatt 13134712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 168 - 240
Target Start/End: Complemental strand, 24117388 - 24117315
Alignment:
Q  168 cactactaa-aaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtca 240  Q
    ||||||||| ||| ||||||||||||||||||||||||||| | ||||| |||||| | |||||||||||||||    
T  24117388 cactactaagaaaacaaaaattagtgaggaaaatttagagaagaaaaacatgaaattcatctctaattccgtca 24117315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 175 - 235
Target Start/End: Complemental strand, 27058467 - 27058407
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattc 235  Q
    ||||| ||||||||||||||| |||||||| || ||||||||| |||||||||||||||||    
T  27058467 aaaaaacaaaaattagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattc 27058407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 2556079 - 2556145
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||||||||||||||||||| || |||||||| |||||| |||||||   ||||||||||||||||    
T  2556079 aaaaagcaaaaattagtgagggaattttagagagggaaaatgtgaaatttttctctaattccgtcac 2556145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 176 - 234
Target Start/End: Complemental strand, 16099054 - 16098996
Alignment:
Q  176 aaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaatt 234  Q
    ||||||||||||| |||||| || |||||||| ||||| ||||||||||||||||||||    
T  16099054 aaaagcaaaaatttgtgagggaattttagagagggaaagcgtgaaatccctctctaatt 16098996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 18916551 - 18916485
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||||||||  |||||||| || ||||||| ||||||||||||||||||| |||||    
T  18916551 aaaaaacaaaaattagtgagagaaatttagggagggaaaacatgaaatccctctctaattcagtcac 18916485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 20065225 - 20065159
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||||||||| |||||| | || | ||||||||||||||||||||||||| |||||    
T  20065225 aaaaaacaaaaattagtgagggaaattttgtgaggaaaaacgtgaaatccctctctaattcagtcac 20065159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 27327600 - 27327666
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||| ||||| |||||||| || ||||||| |||||||||||| ||||||||||||    
T  27327600 aaaaaacaaaaattaatgagggaaatttagtgagggaaaacatgaaatccctctttaattccgtcac 27327666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 28841493 - 28841427
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||||||||| | |||||| |  ||||||| |||||||||||||||||||||||||    
T  28841493 aaaaaacaaaaattagtgagggatatttagtgtgggaaaacatgaaatccctctctaattccgtcac 28841427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 37802529 - 37802463
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||| ||||||||||| ||||||||||| ||||||||| |||||  ||||||||||||||||    
T  37802529 aaaaaacaacaattagtgagggaaatttagagagggaaaacgtaaaatcagtctctaattccgtcac 37802463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 166 - 235
Target Start/End: Original strand, 40018776 - 40018846
Alignment:
Q  166 aacactactaaaaagc-aaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattc 235  Q
    |||||||||||||| | |||||||||||| |||||||||| || ||||||| ||||||| |||||||||||    
T  40018776 aacactactaaaaaaccaaaaattagtgacgaaaatttagtgagggaaaacatgaaatctctctctaattc 40018846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 168 - 240
Target Start/End: Original strand, 8763612 - 8763683
Alignment:
Q  168 cactactaaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtca 240  Q
    ||||||||||||  ||||||||||||  ||||||||| || ||||||| |||||||| |||||||||||||||    
T  8763612 cactactaaaaaa-aaaaattagtgaaaaaaatttagtgaaggaaaacatgaaatccatctctaattccgtca 8763683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 241
Target Start/End: Original strand, 32008927 - 32009002
Alignment:
Q  167 acactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||||||||  | ||| ||||||||| |||||||  || ||||||||| |||||||||||||||||||||||    
T  32008927 acactactaaaaaaactaaatttagtgagggaaatttaatgagggaaaacgtaaaatccctctctaattccgtcac 32009002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 182 - 241
Target Start/End: Complemental strand, 37724136 - 37724077
Alignment:
Q  182 aaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||||||||  |||||||| || ||||||||||||||||||| ||||| |||||||    
T  37724136 aaaaattagtgagagaaatttagtgagggaaaacgtgaaatccctcgctaataccgtcac 37724077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 14757272 - 14757206
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||||||||  | |||||| || ||||||| ||||||| |||||||||||||||||    
T  14757272 aaaaaacaaaaattagtgagtgatatttagtgagggaaaacatgaaatctctctctaattccgtcac 14757206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 234
Target Start/End: Original strand, 22192177 - 22192235
Alignment:
Q  176 aaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaatt 234  Q
    |||| ||||||||||||| | |||||||| || ||||||| ||||||||||||||||||    
T  22192177 aaaaacaaaaattagtgacggaaatttagtgagggaaaacatgaaatccctctctaatt 22192235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 228
Target Start/End: Original strand, 36373875 - 36373937
Alignment:
Q  167 acactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctct 228  Q
    |||||||||||||  |||||||||||||||||||||||| || |||||| ||||||| |||||    
T  36373875 acactactaaaaaaacaaaaattagtgaggaaaatttagtgagggaaaatgtgaaattcctct 36373937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 241
Target Start/End: Complemental strand, 28319713 - 28319664
Alignment:
Q  192 gaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||| |||||| | || |||||||||||||||||||||||||||||||||    
T  28319713 gagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcac 28319664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 175 - 236
Target Start/End: Complemental strand, 44366148 - 44366087
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattcc 236  Q
    ||||| ||||||||||||||| || ||||| || | ||||| ||||||||||||||||||||    
T  44366148 aaaaaccaaaaattagtgagggaagtttagtgaggaaaaacatgaaatccctctctaattcc 44366087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 241
Target Start/End: Complemental strand, 13613254 - 13613178
Alignment:
Q  166 aacactactaaaaagc-aaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||||||||||||   |||||||||  ||| || ||||| || ||||||||| |||||||||||||||||||||||    
T  13613254 aacactactaaaaaaataaaaattagcaagggaagtttagtgagggaaaacgtaaaatccctctctaattccgtcac 13613178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 196 - 241
Target Start/End: Complemental strand, 43408641 - 43408596
Alignment:
Q  196 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||| |||| || ||||||||| |||||||||||||||||||||||    
T  43408641 aaaaattagtgagggaaaacgtaaaatccctctctaattccgtcac 43408596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 241
Target Start/End: Complemental strand, 9004453 - 9004393
Alignment:
Q  181 caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||||||||||||| |||||||| || |||||| || ||||  |||||||||||| ||||    
T  9004453 caaaaattagtgagggaaatttagtgagggaaaatgtaaaatttctctctaattccatcac 9004393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 234
Target Start/End: Original strand, 9590461 - 9590513
Alignment:
Q  182 aaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaatt 234  Q
    |||||||||||||| |||||||| ||   ||||||||||||| ||||||||||    
T  9590461 aaaaattagtgagggaaatttagcgagcaaaaacgtgaaatcgctctctaatt 9590513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 234
Target Start/End: Original strand, 37786373 - 37786409
Alignment:
Q  198 aatttagagatggaaaacgtgaaatccctctctaatt 234  Q
    |||||||||| ||||||| ||||||||||||||||||    
T  37786373 aatttagagaaggaaaacatgaaatccctctctaatt 37786409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 165 - 241
Target Start/End: Complemental strand, 74703 - 74626
Alignment:
Q  165 taacactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||||||||||  ||||||||||||||| |||||||| || ||||||| |||||||||||||||||||||||||    
T  74703 taacactactaaaaaaacaaaaattagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcac 74626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 50; Significance: 9e-20; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 168 - 241
Target Start/End: Original strand, 18051818 - 18051891
Alignment:
Q  168 cactactaaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| |||||| ||||||||||||||| |||||| | || |||||||||||||||||||||||||||||||||    
T  18051818 cactattaaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcac 18051891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 166 - 241
Target Start/End: Original strand, 19839155 - 19839231
Alignment:
Q  166 aacactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||||||||||||  |||||||||| ||||||||||||| || ||||||||| |||||||||||||||||||||||    
T  19839155 aacactactaaaaaaacaaaaattagcgaggaaaatttagtgagggaaaacgtaaaatccctctctaattccgtcac 19839231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 168 - 228
Target Start/End: Original strand, 39234921 - 39234981
Alignment:
Q  168 cactactaaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctct 228  Q
    |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||    
T  39234921 cactactaaaaagcaaaaattagtgagggaaatttagagaaggaaaacgtgaaatctctct 39234981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 167 - 241
Target Start/End: Original strand, 5399586 - 5399661
Alignment:
Q  167 acactactaa-aaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||||| ||| ||||||||||||||| |||||||| || ||||||| |||||||||||||||||||||||||    
T  5399586 acactactaacaaaacaaaaattagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcac 5399661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 167 - 241
Target Start/End: Original strand, 25147698 - 25147773
Alignment:
Q  167 acactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||||||||  ||||||||||||||| |||||||| || ||||||| |||||||||||||||||||||||||    
T  25147698 acactactaaaaaaacaaaaattagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcac 25147773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 167 - 241
Target Start/End: Complemental strand, 46286389 - 46286314
Alignment:
Q  167 acactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||||||||  ||||||||||||||| |||||| | || |||||||||||||||||||||||||||||||||    
T  46286389 acactactaaaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcac 46286314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 167 - 241
Target Start/End: Complemental strand, 55309373 - 55309298
Alignment:
Q  167 acactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||||||||  ||||||||||||||| |||||||| || ||||||||| |||||||||||||||||||||||    
T  55309373 acactactaaaaaaacaaaaattagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcac 55309298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 9913244 - 9913310
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||||||||| |||||| || |||||||| ||||||||||||||||||||||||||| |||||    
T  9913244 aaaaagcaaaaatttgtgagggaattttagagagggaaaacgtgaaatccctctctaattctgtcac 9913310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 18744221 - 18744155
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||||||||| |||||| | || |||||||||||||||||||||||||||||||||    
T  18744221 aaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcac 18744155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 22128463 - 22128397
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||||||||| |||||||| || ||||||||||||||||||||||||||| |||||    
T  22128463 aaaaaacaaaaattagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattctgtcac 22128397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 37761993 - 37761927
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| |||||| || |||||||||||||| || |||||||||||||||||||||||||||||||||    
T  37761993 aaaaatcaaaaaataatgaggaaaatttagtgagggaaaacgtgaaatccctctctaattccgtcac 37761927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 166 - 241
Target Start/End: Complemental strand, 27040186 - 27040110
Alignment:
Q  166 aacactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||||||||||||  |||| |||||||||| |||||| | || |||||||||||||||||||||||||||||||||    
T  27040186 aacactactaaaaaaacaaatattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcac 27040110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 166 - 241
Target Start/End: Original strand, 33914035 - 33914111
Alignment:
Q  166 aacactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||||||||||||  ||||||||||||||| |||||||| || | ||||| |||||||||||||||||||||||||    
T  33914035 aacactactaaaaaaacaaaaattagtgagggaaatttagtgaggaaaaacatgaaatccctctctaattccgtcac 33914111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 166 - 241
Target Start/End: Complemental strand, 37378784 - 37378708
Alignment:
Q  166 aacactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||||||||||||  ||||||||||||||| |||||| | || ||||||| |||||||||||||||||||||||||    
T  37378784 aacactactaaaaaaacaaaaattagtgagggaaattttgtgagggaaaacatgaaatccctctctaattccgtcac 37378708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 1638433 - 1638499
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| |||||||||||||||||||||||| || ||||||| |||||| |||| |||||||||||||    
T  1638433 aaaaaacaaaaattagtgaggaaaatttagtgagggaaaacatgaaattcctccctaattccgtcac 1638499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 2275829 - 2275763
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||||||||| | |||||| || ||||||| |||||||||||||||||||||||||    
T  2275829 aaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcac 2275763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 22156752 - 22156686
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||||||||| | |||||| || ||||||| |||||||||||||||||||||||||    
T  22156752 aaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcac 22156686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 38223496 - 38223562
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||||||||| |||||| ||||||||||| ||||||||  ||||||||||||||||| |||||    
T  38223496 aaaaagcaaaaatttgtgagggaaatttagagagggaaaacgcaaaatccctctctaattctgtcac 38223562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 166 - 241
Target Start/End: Original strand, 8878859 - 8878935
Alignment:
Q  166 aacactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||||||||||||  ||||||||||||| | |||||||| || ||||||| ||||||||||||||||||| |||||    
T  8878859 aacactactaaaaaaacaaaaattagtgacggaaatttagtgagggaaaacatgaaatccctctctaattctgtcac 8878935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 167 - 241
Target Start/End: Original strand, 5473826 - 5473901
Alignment:
Q  167 acactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||||||||  | ||| |||||||||||||||||| || ||||||||| |||||||||| ||||||||||||    
T  5473826 acactactaaaaaaactaaatttagtgaggaaaatttagtgagggaaaacgtaaaatccctctttaattccgtcac 5473901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 167 - 241
Target Start/End: Complemental strand, 19680584 - 19680509
Alignment:
Q  167 acactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||||||||  ||||||||| ||||| |||||| | || ||||||||| |||||||||||||||||||||||    
T  19680584 acactactaaaaaaacaaaaattaatgagggaaattttgtgagggaaaacgtaaaatccctctctaattccgtcac 19680509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 167 - 236
Target Start/End: Complemental strand, 24682485 - 24682417
Alignment:
Q  167 acactactaaaaa-gcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattcc 236  Q
    ||||||||||||| |||||||||||||||| ||||| | ||  ||||||||||||||||||||||||||||    
T  24682485 acactactaaaaaagcaaaaattagtgagggaaattgaaag--ggaaaacgtgaaatccctctctaattcc 24682417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 182 - 241
Target Start/End: Original strand, 36689670 - 36689729
Alignment:
Q  182 aaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||||||| |||| |||||||| |  |||||||||||||||||||||||||||||||||    
T  36689670 aaaaattagcgagggaaatttagtgtgggaaaacgtgaaatccctctctaattccgtcac 36689729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 30269139 - 30269073
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||||||||| |||||||| || |||||| || ||||| |||||||||||||||||    
T  30269139 aaaaaacaaaaattagtgagggaaatttagcgagggaaaatgtaaaatctctctctaattccgtcac 30269073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 30283050 - 30283116
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||||||||| |||||||| || |||||| || ||||| |||||||||||||||||    
T  30283050 aaaaaacaaaaattagtgagggaaatttagcgagggaaaatgtaaaatctctctctaattccgtcac 30283116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 187 - 241
Target Start/End: Complemental strand, 32175876 - 32175822
Alignment:
Q  187 ttagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||||||| |||||||| || ||||||||| |||||||||||||||||||||||    
T  32175876 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcac 32175822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 172 - 241
Target Start/End: Complemental strand, 30420187 - 30420118
Alignment:
Q  172 actaaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||| |||||||||||||| |||||||||||   |||||| |||||| ||||||||||| ||||||    
T  30420187 actaaaaaacaaaaattagtgagaaaaatttagagtgagaaaacatgaaattcctctctaatttcgtcac 30420118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 187 - 240
Target Start/End: Complemental strand, 45532718 - 45532665
Alignment:
Q  187 ttagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtca 240  Q
    ||||||||| |||||||| || ||||||||| ||||||||||||||||||||||    
T  45532718 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtca 45532665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 182 - 241
Target Start/End: Original strand, 12071955 - 12072014
Alignment:
Q  182 aaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||||||||| | |||||| || ||||||| | |||||||||||||||||||||||    
T  12071955 aaaaattagtgagggatatttagtgaaggaaaacataaaatccctctctaattccgtcac 12072014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 241
Target Start/End: Complemental strand, 13565075 - 13565000
Alignment:
Q  167 acactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||||||||  | ||| ||||||||| |||||||| || ||||||||| |||| ||||||||||||||||||    
T  13565075 acactactaaaaaaactaaatttagtgagggaaatttagtgagggaaaacgtaaaattcctctctaattccgtcac 13565000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 237
Target Start/End: Original strand, 22168253 - 22168316
Alignment:
Q  174 taaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccg 237  Q
    |||||| ||||||||||||||| | |||||| || ||||||| |||||| ||||||||||||||    
T  22168253 taaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaattcctctctaattccg 22168316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 196 - 241
Target Start/End: Original strand, 29625332 - 29625377
Alignment:
Q  196 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||| |||| || |||||||||||||||||||||||||||||||||    
T  29625332 aaaaattagtgagggaaaacgtgaaatccctctctaattccgtcac 29625377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 175 - 240
Target Start/End: Complemental strand, 30568150 - 30568085
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtca 240  Q
    ||||| ||||||||||||| | |||||| | || ||||||||| ||||| ||||||||||||||||    
T  30568150 aaaaatcaaaaattagtgaaggaaattttgtgagggaaaacgtaaaatctctctctaattccgtca 30568085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 241
Target Start/End: Complemental strand, 4586887 - 4586843
Alignment:
Q  197 aaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||| || ||||||||| |||||||||||||||||||||||    
T  4586887 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcac 4586843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 196 - 240
Target Start/End: Complemental strand, 9239411 - 9239367
Alignment:
Q  196 aaaatttagagatggaaaacgtgaaatccctctctaattccgtca 240  Q
    |||| |||| || ||||||||||||||||||||||||||||||||    
T  9239411 aaaaattagtgagggaaaacgtgaaatccctctctaattccgtca 9239367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 241
Target Start/End: Complemental strand, 13028945 - 13028901
Alignment:
Q  197 aaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||| || ||||||||| |||||||||||||||||||||||    
T  13028945 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcac 13028901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 241
Target Start/End: Original strand, 3612972 - 3613047
Alignment:
Q  167 acactactaaaaagcaaaaa-ttagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||||||||  ||||| ||||||||  || |||||||| | |||||||||||| ||||||||||| ||||||    
T  3612972 acactactaaaaaagaaaaacttagtgagagaattttagagaggaaaaacgtgaaattcctctctaatttcgtcac 3613047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 196 - 241
Target Start/End: Original strand, 14944753 - 14944798
Alignment:
Q  196 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||| |||| || ||||||||| |||||||||||||||||||||||    
T  14944753 aaaaattagtgagggaaaacgtaaaatccctctctaattccgtcac 14944798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 25225092 - 25225145
Alignment:
Q  182 aaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattc 235  Q
    |||||||| ||||  |||||||||||  |||| |||||||||||||||||||||    
T  25225092 aaaaattaatgagagaaatttagagaaagaaatcgtgaaatccctctctaattc 25225145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 196 - 241
Target Start/End: Original strand, 38619854 - 38619899
Alignment:
Q  196 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||| |||| || ||||||||| |||||||||||||||||||||||    
T  38619854 aaaaattagtgagggaaaacgtaaaatccctctctaattccgtcac 38619899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 4068811 - 4068755
Alignment:
Q  185 aattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||| || ||||||||||| ||||||||| | |||| |||||||||||| |||||    
T  4068811 aattagcgatgaaaatttagaaatggaaaacataaaattcctctctaattctgtcac 4068755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 241
Target Start/End: Original strand, 25026565 - 25026609
Alignment:
Q  197 aaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||| || ||||||||| ||||| |||||||||||||||||    
T  25026565 aaatttagtgagggaaaacgtaaaatctctctctaattccgtcac 25026609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 241
Target Start/End: Original strand, 45091282 - 45091326
Alignment:
Q  197 aaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||| || ||||||||| |||||| ||||||||||||||||    
T  45091282 aaatttagtgagggaaaacgtaaaatccttctctaattccgtcac 45091326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 4e-19; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 165 - 241
Target Start/End: Complemental strand, 18010221 - 18010145
Alignment:
Q  165 taacactactaaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||||||||||||| ||||||||||||||| | |||||  || ||||||| |||||||||||||||||||||||||    
T  18010221 taacactactaaaaaacaaaaattagtgagggatatttattgagggaaaacatgaaatccctctctaattccgtcac 18010145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 167 - 241
Target Start/End: Original strand, 3823110 - 3823185
Alignment:
Q  167 acactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||||||||  ||||||||||||||| |||||||| || ||||||||| |||||||||||||||||||||||    
T  3823110 acactactaaaaaaacaaaaattagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcac 3823185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 167 - 241
Target Start/End: Original strand, 37992076 - 37992151
Alignment:
Q  167 acactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||||||||  |||||||||||||||||||||||| || ||||||| ||||||| |||||||||||||||||    
T  37992076 acactactaaaaaaacaaaaattagtgaggaaaatttagtgagggaaaacatgaaatctctctctaattccgtcac 37992151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 17104016 - 17103950
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||||||||| |||||||| || ||||||| |||||||||||||||||||||||||    
T  17104016 aaaaaacaaaaattagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcac 17103950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 168 - 241
Target Start/End: Complemental strand, 17824772 - 17824701
Alignment:
Q  168 cactactaaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||||||||||  |||||||||||||| |||||||| || ||||||| |||||||||||||||||||||||||    
T  17824772 cactactaaaaa--aaaaattagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcac 17824701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 168 - 241
Target Start/End: Original strand, 29345049 - 29345123
Alignment:
Q  168 cactacta-aaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||| ||||| ||||||| |||||| ||||||||||| ||||||||||||||||||| |||||||||||||    
T  29345049 cactactagaaaagaaaaaatttgtgagggaaatttagagagggaaaacgtgaaatccctccctaattccgtcac 29345123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 168 - 241
Target Start/End: Complemental strand, 24576182 - 24576109
Alignment:
Q  168 cactactaaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||||||| ||||||||||||||| | |||||| || ||||||| ||||||| |||||||||||||||||    
T  24576182 cactactaaaaaacaaaaattagtgagggatatttagcgagggaaaacatgaaatctctctctaattccgtcac 24576109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 167 - 241
Target Start/End: Original strand, 4330955 - 4331030
Alignment:
Q  167 acactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||||||||  ||||||||||||||| |||||| | || |||||||||||||| ||||||||||||||||||    
T  4330955 acactactaaaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaattcctctctaattccgtcac 4331030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 24479949 - 24479883
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||||||||||||||| |  ||||||||| |||||||||||||| |||||||||||| |||||    
T  24479949 aaaaagcaaaaattagtgagaattatttagagaaggaaaacgtgaaattcctctctaattctgtcac 24479883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 175 - 240
Target Start/End: Complemental strand, 31344323 - 31344258
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtca 240  Q
    |||||||||| |||||||||| || |||||||| |||||| ||||||| |||||||||||||||||    
T  31344323 aaaaagcaaatattagtgagggaattttagagagggaaaatgtgaaattcctctctaattccgtca 31344258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 162 - 241
Target Start/End: Original strand, 32961631 - 32961711
Alignment:
Q  162 atataacactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||| |||||||||||||  ||||||||||||||| |||||||| || |||||| || |||| ||||||||||||||||||    
T  32961631 atatcacactactaaaaaaacaaaaattagtgagggaaatttagtgagggaaaatgtaaaattcctctctaattccgtcac 32961711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 167 - 241
Target Start/End: Complemental strand, 4647915 - 4647840
Alignment:
Q  167 acactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||||||||  ||||||||||||||  |||||| | || |||||| ||||||||||||||||||||||||||    
T  4647915 acactactaaaaaaacaaaaattagtgagagaaattttgtgagggaaaatgtgaaatccctctctaattccgtcac 4647840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 167 - 241
Target Start/End: Original strand, 5879181 - 5879256
Alignment:
Q  167 acactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||||||||  ||||||||||||||| |||||||| || | ||||||| |||| ||||||||||||||||||    
T  5879181 acactactaaaaaaacaaaaattagtgagggaaatttagtgaggaaaaacgtaaaatgcctctctaattccgtcac 5879256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 164 - 234
Target Start/End: Complemental strand, 18844707 - 18844636
Alignment:
Q  164 ataacactactaaaaagc-aaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaatt 234  Q
    ||||||||||||||||   |||||||||||||| |||||||| || ||||||| ||||||||||||||||||    
T  18844707 ataacactactaaaaaaataaaaattagtgagggaaatttagtgaaggaaaacatgaaatccctctctaatt 18844636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 175 - 237
Target Start/End: Complemental strand, 6816534 - 6816472
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccg 237  Q
    ||||| ||||||||||||||| | |||||| || ||||||| |||||||||||||||||||||    
T  6816534 aaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccg 6816472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 6817040 - 6817106
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||||||||| |||||||| || |||||| || ||||| |||||||||||||||||    
T  6817040 aaaaaacaaaaattagtgagggaaatttagtgagggaaaatgtaaaatctctctctaattccgtcac 6817106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 175 - 233
Target Start/End: Complemental strand, 9915191 - 9915133
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaat 233  Q
    ||||| ||||||||||||||| |||||| | || |||||||||||||||||||||||||    
T  9915191 aaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtgaaatccctctctaat 9915133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 15251589 - 15251654
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| |||||||||||||||||| |||| ||| |||||||||||||||| |||||||||| |||||    
T  15251589 aaaaatcaaaaattagtgaggaaa-tttaaagagggaaaacgtgaaatccttctctaattctgtcac 15251654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 17810284 - 17810350
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||||||||| | |||||| || ||||||| |||||||||||||||||| ||||||    
T  17810284 aaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaatttcgtcac 17810350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 19240853 - 19240919
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||||||||| |||||| | || ||||||||| |||| ||||||||||||||||||    
T  19240853 aaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtaaaattcctctctaattccgtcac 19240919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 19314037 - 19314103
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||||||||| |||||| | || ||||||||| |||| ||||||||||||||||||    
T  19314037 aaaaaacaaaaattagtgagggaaattttgtgagggaaaacgtaaaattcctctctaattccgtcac 19314103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 21350464 - 21350530
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||||||||| |||||||| || | ||||||| |||||| ||||||||||||||||    
T  21350464 aaaaaacaaaaattagtgagggaaatttagtgaggaaaaacgtaaaatccatctctaattccgtcac 21350530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 27910915 - 27910849
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||||||||| | |||||  || ||||||| |||||||||||||||||||||||||    
T  27910915 aaaaaacaaaaattagtgagggatatttactgagggaaaacatgaaatccctctctaattccgtcac 27910849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 27957334 - 27957268
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||||||||| | |||||  || ||||||| |||||||||||||||||||||||||    
T  27957334 aaaaaacaaaaattagtgagggatatttactgagggaaaacatgaaatccctctctaattccgtcac 27957268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 29350909 - 29350975
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||||||||| | |||||| || ||||||| |||||||||||||||||| ||||||    
T  29350909 aaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattgcgtcac 29350975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 40289571 - 40289506
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||||||||| |||||||| || ||||||||| ||||||||| |||||||||||||    
T  40289571 aaaaaacaaaaattagtgagggaaatttagtgagggaaaacgtaaaatccctc-ctaattccgtcac 40289506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 165 - 241
Target Start/End: Original strand, 27869213 - 27869290
Alignment:
Q  165 taacactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||||||||||  ||||||||||||||  | |||||| || ||||||| ||||||| |||||||||||||||||    
T  27869213 taacactactaaaaaaacaaaaattagtgagagatatttagtgagggaaaacatgaaatctctctctaattccgtcac 27869290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 184 - 241
Target Start/End: Complemental strand, 43431701 - 43431644
Alignment:
Q  184 aaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||||||| |||||||| || ||||||||| |||||||||||||||| ||||||    
T  43431701 aaattagtgagggaaatttagtgagggaaaacgtaaaatccctctctaatttcgtcac 43431644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 168 - 236
Target Start/End: Original strand, 9631382 - 9631450
Alignment:
Q  168 cactactaaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattcc 236  Q
    |||||||||||| |||||||||| |||| |||||| | || ||||||||||||||  ||||||||||||    
T  9631382 cactactaaaaaacaaaaattagcgagggaaattttgtgaaggaaaacgtgaaatttctctctaattcc 9631450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 166 - 241
Target Start/End: Original strand, 22939289 - 22939365
Alignment:
Q  166 aacactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||||||||||||  ||||||||||||||  | |||||| || ||||||| ||||||| |||||||||||||||||    
T  22939289 aacactactaaaaaaacaaaaattagtgagagatatttagtgagggaaaacatgaaatctctctctaattccgtcac 22939365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 166 - 241
Target Start/End: Complemental strand, 24193357 - 24193281
Alignment:
Q  166 aacactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||||||||||||  ||||||||||||||  |||||| | || ||||||| ||||||| |||||||||||||||||    
T  24193357 aacactactaaaaaaacaaaaattagtgagagaaattttgtgagggaaaacatgaaatctctctctaattccgtcac 24193281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 241
Target Start/End: Original strand, 33652544 - 33652619
Alignment:
Q  167 acactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||||||||  ||||||||||||||| | |||||| || ||||||| |||||||| ||||||| ||||||||    
T  33652544 acactactaaaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaatccttctctaactccgtcac 33652619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 168 - 236
Target Start/End: Complemental strand, 3692330 - 3692261
Alignment:
Q  168 cactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattcc 236  Q
    ||||||||||||  ||||||||||||||| ||||||| ||| | ||||||| |||||| |||||||||||    
T  3692330 cactactaaaaatacaaaaattagtgagggaaatttatagaggtaaaacgtaaaatccttctctaattcc 3692261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 196 - 241
Target Start/End: Complemental strand, 26399137 - 26399092
Alignment:
Q  196 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||| |||| || |||||||||||||||||||||||||||||||||    
T  26399137 aaaaattagtgagggaaaacgtgaaatccctctctaattccgtcac 26399092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 196 - 241
Target Start/End: Original strand, 32247916 - 32247961
Alignment:
Q  196 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||| |||| || |||||||||||||||||||||||||||||||||    
T  32247916 aaaaattagtgagggaaaacgtgaaatccctctctaattccgtcac 32247961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 241
Target Start/End: Complemental strand, 5670298 - 5670254
Alignment:
Q  197 aaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||| || ||||||||| |||||||||||||||||||||||    
T  5670298 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcac 5670254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 241
Target Start/End: Original strand, 11938753 - 11938797
Alignment:
Q  197 aaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||| || ||||||||| |||||||||||||||||||||||    
T  11938753 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcac 11938797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 241
Target Start/End: Original strand, 19256220 - 19256264
Alignment:
Q  197 aaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||| || ||||||||| |||||||||||||||||||||||    
T  19256220 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcac 19256264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 241
Target Start/End: Original strand, 24636660 - 24636704
Alignment:
Q  197 aaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||| || ||||||||| |||||||||||||||||||||||    
T  24636660 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcac 24636704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 241
Target Start/End: Complemental strand, 8555456 - 8555389
Alignment:
Q  174 taaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||| | ||| ||||||||| |||||||| || ||||||| | ||||| |||||||||||||||||    
T  8555456 taaaaaactaaatttagtgagggaaatttagtgagggaaaacataaaatctctctctaattccgtcac 8555389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 182 - 241
Target Start/End: Complemental strand, 16062083 - 16062024
Alignment:
Q  182 aaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||||||||| ||||||   || | ||||||||||||| |||||||||||||||||    
T  16062083 aaaaattagtgagggaaattttttgaggaaaaacgtgaaatcactctctaattccgtcac 16062024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 182 - 241
Target Start/End: Original strand, 25651071 - 25651130
Alignment:
Q  182 aaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||||||||| || ||||| || ||||||||| || || |||||||||||||||||    
T  25651071 aaaaattagtgagggaagtttagtgaaggaaaacgtaaagtctctctctaattccgtcac 25651130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 235
Target Start/End: Complemental strand, 6103919 - 6103846
Alignment:
Q  163 tataacactactaaaa-agcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattc 235  Q
    |||||| ||||||||| | |||| |||||||||| ||||||||||| | ||||| ||||||  |||||||||||    
T  6103919 tataaccctactaaaataacaaatattagtgagggaaatttagagaggaaaaacatgaaatttctctctaattc 6103846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 241
Target Start/End: Complemental strand, 21219388 - 21219325
Alignment:
Q  176 aaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||| ||||||||||||||| |||||||  || |||| ||||||||||||||||||||||| ||||    
T  21219388 aaaatcaaaaattagtgagggaaatttac-ga-ggaatacgtgaaatccctctctaattccatcac 21219325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 196 - 241
Target Start/End: Original strand, 30687943 - 30687988
Alignment:
Q  196 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||||||| || |||||| || |||||||||||||||||||||||    
T  30687943 aaaatttagtgaaggaaaatgtaaaatccctctctaattccgtcac 30687988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 196 - 241
Target Start/End: Complemental strand, 31399638 - 31399593
Alignment:
Q  196 aaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||| |||| || |||||||||||||||| ||||||||||||||||    
T  31399638 aaaaattagtgagggaaaacgtgaaatccatctctaattccgtcac 31399593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 241
Target Start/End: Complemental strand, 25000560 - 25000516
Alignment:
Q  197 aaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||| || ||||||||| | |||||||||||||||||||||    
T  25000560 aaatttagtgagggaaaacgtaacatccctctctaattccgtcac 25000516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 209 - 241
Target Start/End: Complemental strand, 33413087 - 33413055
Alignment:
Q  209 ggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||||||| |||||||||||||||||||||||    
T  33413087 ggaaaacgtaaaatccctctctaattccgtcac 33413055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 121138 - 121072
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||||| || ||||||| || |||||||| |||||||||||||||||||||||||||||||||    
T  121138 aaaaagcaaacatcagtgagggaattttagagagggaaaacgtgaaatccctctctaattccgtcac 121072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 175 - 240
Target Start/End: Original strand, 112316 - 112381
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtca 240  Q
    |||||| |||||||||||||||||||| ||||| | ||||||| ||||||||||||||||||||||    
T  112316 aaaaagaaaaaattagtgaggaaaattcagagaggaaaaacgttaaatccctctctaattccgtca 112381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 166 - 241
Target Start/End: Original strand, 58560 - 58636
Alignment:
Q  166 aacactactaaaaagc-aaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||||||||||||   |||||||||||||| |||||||| || ||||||| |||||||||||||||||||||||||    
T  58560 aacactactaaaaaaataaaaattagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcac 58636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 167 - 241
Target Start/End: Complemental strand, 6139 - 6064
Alignment:
Q  167 acactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||||||||  ||||||||||||||| |||||||| || ||||||||| |||||||||||||||||| ||||    
T  6139 acactactaaaaaaacaaaaattagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccatcac 6064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 167 - 241
Target Start/End: Complemental strand, 9389 - 9314
Alignment:
Q  167 acactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||||||||  ||||||||||||||| |||||||| || ||||||||| |||||| ||||||||||||||||    
T  9389 acactactaaaaaaacaaaaattagtgagggaaatttagtgagggaaaacgtaaaatccttctctaattccgtcac 9314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 167 - 241
Target Start/End: Complemental strand, 37947 - 37872
Alignment:
Q  167 acactactaaaaag-caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||||||||  ||||||||||||||| |||||| | || ||||||| |||||||||||||||||||||||||    
T  37947 acactactaaaaaaacaaaaattagtgagggaaattttgtgagggaaaacatgaaatccctctctaattccgtcac 37872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 44; Significance: 4e-16; HSPs: 3)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 182 - 241
Target Start/End: Original strand, 202769 - 202828
Alignment:
Q  182 aaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||||||||||||||||||||| || ||||||||| |||| ||||||||||||||||||    
T  202769 aaaaattagtgaggaaaatttagtgagggaaaacgtaaaattcctctctaattccgtcac 202828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 168 - 241
Target Start/End: Complemental strand, 276293 - 276219
Alignment:
Q  168 cactactaaaa-agcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||||||||| | ||||||||||||||| |||||| | ||  ||||||||||||||||||||||||||||||||    
T  276293 cactactaaaagaacaaaaattagtgagggaaattttgtgagagaaaacgtgaaatccctctctaattccgtcac 276219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 191 - 241
Target Start/End: Original strand, 3746 - 3796
Alignment:
Q  191 tgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| |||||||| || ||||||||| |||||||||||||||||||||||    
T  3746 tgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcac 3796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0717 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 1070 - 1004
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||||||||| | |||||| || ||||||| |||||||||||||||||||||||||    
T  1070 aaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcac 1004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 19591 - 19657
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||||||||| | |||||| || ||||||| |||||||||||||||||||||||||    
T  19591 aaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcac 19657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 8261 - 8195
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||||||||| | |||||| || ||||||| |||||||||||||||||||||||||    
T  8261 aaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcac 8195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 21993 - 21927
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||||||||| | |||||| || ||||||| |||||||||||||||||||||||||    
T  21993 aaaaaacaaaaattagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcac 21927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 84291 - 84357
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||||||||| |||||| | || |||||| ||||||||||||||||||||||||||    
T  84291 aaaaaacaaaaattagtgagggaaattttgtgagggaaaatgtgaaatccctctctaattccgtcac 84357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 181 - 241
Target Start/End: Original strand, 7499 - 7559
Alignment:
Q  181 caaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||| |||||||| || ||||||||| |||||||||||||||||||||||    
T  7499 caaaatttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcac 7559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0655 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0655
Description:

Target: scaffold0655; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 3311 - 3247
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||||||||| |||||| ||||||||||  ||||||||||||||||||| ||||||| |||||    
T  3311 aaaaagcaaaaatttgtgagggaaatttagag--ggaaaacgtgaaatccctcactaattctgtcac 3247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 182 - 241
Target Start/End: Original strand, 7451 - 7510
Alignment:
Q  182 aaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||| ||||| |||||||| || ||||||||||||||||||||||||||| |||||    
T  7451 aaaaattaatgagggaaatttagtgagggaaaacgtgaaatccctctctaattctgtcac 7510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 167 - 241
Target Start/End: Original strand, 12632 - 12706
Alignment:
Q  167 acactactaa-aaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||||| ||| ||||||||||||||| |||||| | || |||||||||| ||||||||||||||||||||||    
T  12632 acactactaagaaaacaaaaattagtgagggaaattttgtgagggaaaacgtg-aatccctctctaattccgtcac 12706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 182 - 241
Target Start/End: Original strand, 10153 - 10212
Alignment:
Q  182 aaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||||||||| |||||||  || ||||||| |||||||||||||||||||||||||    
T  10153 aaaaattagtgagggaaatttactgagggaaaacatgaaatccctctctaattccgtcac 10212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 39854 - 39788
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||| ||||||||||||||| ||||||   || ||||||||||||||| |||||||||||||||||    
T  39854 aaaaaacaaaaattagtgagggaaattttatgagggaaaacgtgaaatctctctctaattccgtcac 39788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 175 - 240
Target Start/End: Original strand, 6783 - 6848
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtca 240  Q
    ||||| ||||||||||| ||| |||||||| || ||||||| |||||| |||||||||||||||||    
T  6783 aaaaaacaaaaattagtaagggaaatttagtgagggaaaacatgaaattcctctctaattccgtca 6848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 238
Target Start/End: Original strand, 219624 - 219687
Alignment:
Q  175 aaaaagcaaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgt 238  Q
    ||||| ||||||||||||||  | |||||| || ||||||| ||||||||||||||||||||||    
T  219624 aaaaaacaaaaattagtgagagatatttagtgagggaaaacatgaaatccctctctaattccgt 219687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 187 - 241
Target Start/End: Original strand, 26483 - 26537
Alignment:
Q  187 ttagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||||||| | |||||| || ||||||||| |||||||||||||||||||||||    
T  26483 ttagtgagggacatttagtgagggaaaacgtaaaatccctctctaattccgtcac 26537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 185 - 238
Target Start/End: Original strand, 43915 - 43968
Alignment:
Q  185 aattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgt 238  Q
    |||||||||||||||||||| || ||||||||| |||| | |||||||||||||    
T  43915 aattagtgaggaaaatttagtgagggaaaacgtaaaattcttctctaattccgt 43968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 241
Target Start/End: Complemental strand, 15119 - 15075
Alignment:
Q  197 aaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||| || ||||||||| |||||||||||||||||||||||    
T  15119 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcac 15075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 241
Target Start/End: Original strand, 22221 - 22265
Alignment:
Q  197 aaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||| || ||||||||| |||||||||||||||||||||||    
T  22221 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcac 22265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0502 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 241
Target Start/End: Original strand, 10871 - 10946
Alignment:
Q  167 acactactaaaaagc-aaaaattagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    ||||||||||||| | |||||||||||||| |||||||  || | ||||| |||||| |||||||||||| |||||    
T  10871 acactactaaaaaaccaaaaattagtgagggaaatttactgaggaaaaacatgaaattcctctctaattctgtcac 10946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 241
Target Start/End: Complemental strand, 10792 - 10748
Alignment:
Q  197 aaatttagagatggaaaacgtgaaatccctctctaattccgtcac 241  Q
    |||||||| || ||||||||| |||| ||||||||||||||||||    
T  10792 aaatttagtgagggaaaacgtaaaattcctctctaattccgtcac 10748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University