View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17723_high_10 (Length: 421)

Name: NF17723_high_10
Description: NF17723
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17723_high_10
NF17723_high_10
[»] chr8 (28 HSPs)
chr8 (8-336)||(34318391-34318721)
chr8 (340-388)||(3874439-3874487)
chr8 (340-388)||(18811154-18811202)
chr8 (340-388)||(28283062-28283110)
chr8 (339-388)||(15809664-15809712)
chr8 (339-388)||(24873038-24873087)
chr8 (385-421)||(3874368-3874404)
chr8 (340-388)||(3883436-3883484)
chr8 (385-421)||(3883519-3883555)
chr8 (385-421)||(4424393-4424429)
chr8 (385-421)||(22684577-22684613)
chr8 (340-388)||(43530561-43530609)
chr8 (385-421)||(44721218-44721254)
chr8 (357-388)||(22684510-22684541)
chr8 (357-388)||(28251428-28251459)
chr8 (356-387)||(32339757-32339788)
chr8 (357-388)||(43080048-43080079)
chr8 (357-388)||(43082419-43082450)
chr8 (385-420)||(43530491-43530526)
chr8 (391-421)||(609110-609140)
chr8 (339-381)||(18813335-18813377)
chr8 (340-388)||(15073153-15073202)
chr8 (385-418)||(18811085-18811118)
chr8 (385-418)||(18813259-18813292)
chr8 (359-388)||(44721289-44721318)
chr8 (356-388)||(4424465-4424497)
chr8 (385-421)||(27827360-27827396)
chr8 (337-388)||(27829742-27829793)
[»] chr4 (60 HSPs)
chr4 (340-388)||(22782577-22782625)
chr4 (338-388)||(17662090-17662139)
chr4 (330-388)||(47210627-47210685)
chr4 (340-388)||(9176315-9176362)
chr4 (385-421)||(16931714-16931750)
chr4 (385-421)||(16934068-16934104)
chr4 (340-388)||(22780212-22780260)
chr4 (340-388)||(44599680-44599728)
chr4 (340-388)||(47868846-47868894)
chr4 (334-388)||(40637517-40637572)
chr4 (338-388)||(5635316-5635365)
chr4 (380-421)||(14633691-14633732)
chr4 (340-388)||(22046526-22046575)
chr4 (339-388)||(31849439-31849487)
chr4 (356-388)||(2484730-2484762)
chr4 (385-421)||(2484797-2484833)
chr4 (340-384)||(3937126-3937170)
chr4 (385-421)||(5635400-5635436)
chr4 (356-388)||(8631275-8631307)
chr4 (385-421)||(9148608-9148644)
chr4 (385-417)||(9176397-9176429)
chr4 (385-421)||(11437735-11437771)
chr4 (356-388)||(24348645-24348677)
chr4 (385-421)||(37089296-37089332)
chr4 (385-421)||(38409577-38409613)
chr4 (385-421)||(44599762-44599798)
chr4 (385-421)||(51015618-51015654)
chr4 (385-420)||(11435328-11435363)
chr4 (357-388)||(11435399-11435430)
chr4 (357-388)||(18847596-18847627)
chr4 (338-388)||(37089210-37089261)
chr4 (385-420)||(47210720-47210755)
chr4 (358-388)||(14633762-14633792)
chr4 (391-421)||(22044321-22044351)
chr4 (339-388)||(7941767-7941815)
chr4 (340-389)||(9148678-9148727)
chr4 (388-417)||(9174072-9174101)
chr4 (340-388)||(14787274-14787323)
chr4 (340-388)||(14789273-14789322)
chr4 (385-421)||(18847525-18847562)
chr4 (359-388)||(22132248-22132277)
chr4 (359-388)||(22134476-22134505)
chr4 (340-388)||(24889237-24889286)
chr4 (359-388)||(26085836-26085865)
chr4 (340-388)||(36921338-36921387)
chr4 (340-388)||(38928024-38928073)
chr4 (340-388)||(51015689-51015738)
chr4 (385-417)||(5198781-5198813)
chr4 (356-388)||(5198848-5198880)
chr4 (385-417)||(8631342-8631374)
chr4 (356-388)||(9174002-9174034)
chr4 (356-388)||(11006110-11006142)
chr4 (356-388)||(11008424-11008456)
chr4 (340-388)||(11437807-11437855)
chr4 (340-388)||(16931631-16931679)
chr4 (340-388)||(16933988-16934036)
chr4 (385-421)||(22046610-22046646)
chr4 (385-417)||(31849522-31849554)
chr4 (356-388)||(38409648-38409680)
chr4 (385-421)||(47868774-47868810)
[»] chr5 (35 HSPs)
chr5 (338-388)||(38959970-38960020)
chr5 (339-388)||(23741696-23741745)
chr5 (340-388)||(4410411-4410458)
chr5 (340-388)||(15354414-15354462)
chr5 (340-388)||(15356690-15356738)
chr5 (340-388)||(23665436-23665484)
chr5 (340-388)||(23793103-23793151)
chr5 (339-388)||(21684293-21684341)
chr5 (339-388)||(38882478-38882526)
chr5 (340-388)||(3372977-3373025)
chr5 (385-421)||(3373061-3373097)
chr5 (385-421)||(4236947-4236983)
chr5 (385-421)||(10529022-10529058)
chr5 (385-421)||(10750018-10750054)
chr5 (385-421)||(10757494-10757530)
chr5 (385-421)||(25804343-25804379)
chr5 (385-421)||(25921397-25921433)
chr5 (356-388)||(34476909-34476941)
chr5 (385-421)||(34476977-34477013)
chr5 (356-388)||(34479274-34479306)
chr5 (385-421)||(38882407-38882443)
chr5 (340-388)||(39798420-39798468)
chr5 (357-388)||(10750090-10750121)
chr5 (357-388)||(10757566-10757597)
chr5 (391-421)||(2175220-2175250)
chr5 (356-386)||(4237020-4237050)
chr5 (356-386)||(10528954-10528984)
chr5 (359-388)||(25921333-25921362)
chr5 (359-388)||(31543124-31543153)
chr5 (359-388)||(31545473-31545502)
chr5 (340-388)||(36402170-36402219)
chr5 (385-421)||(21684376-21684412)
chr5 (360-388)||(25804414-25804442)
chr5 (340-388)||(31179213-31179261)
chr5 (385-421)||(34479342-34479378)
[»] chr3 (44 HSPs)
chr3 (338-388)||(9604445-9604495)
chr3 (340-388)||(5522466-5522513)
chr3 (340-388)||(6065633-6065681)
chr3 (340-388)||(25533794-25533842)
chr3 (385-421)||(38210670-38210706)
chr3 (385-421)||(50494298-50494334)
chr3 (385-420)||(11170670-11170705)
chr3 (335-389)||(6063278-6063332)
chr3 (340-392)||(3859877-3859930)
chr3 (356-388)||(456278-456310)
chr3 (356-388)||(458655-458687)
chr3 (340-388)||(747129-747177)
chr3 (385-421)||(1321778-1321814)
chr3 (356-388)||(5192021-5192053)
chr3 (356-388)||(10084244-10084276)
chr3 (356-388)||(10191167-10191199)
chr3 (340-388)||(10621366-10621414)
chr3 (356-388)||(10955882-10955914)
chr3 (385-421)||(10955949-10955985)
chr3 (356-388)||(10958178-10958210)
chr3 (385-421)||(11168400-11168436)
chr3 (356-388)||(11168472-11168504)
chr3 (385-421)||(25533724-25533760)
chr3 (340-388)||(38210741-38210789)
chr3 (385-421)||(38890339-38890375)
chr3 (356-388)||(41849423-41849455)
chr3 (340-388)||(43226447-43226495)
chr3 (340-388)||(50494369-50494417)
chr3 (385-421)||(51726929-51726965)
chr3 (356-388)||(53893909-53893941)
chr3 (385-420)||(5191951-5191986)
chr3 (357-388)||(5886568-5886599)
chr3 (357-388)||(5900041-5900072)
chr3 (356-387)||(51726862-51726893)
chr3 (391-421)||(10084317-10084347)
chr3 (391-421)||(10191240-10191270)
chr3 (391-421)||(10958251-10958281)
chr3 (358-388)||(38890411-38890441)
chr3 (358-388)||(43228657-43228687)
chr3 (340-388)||(4308122-4308171)
chr3 (385-421)||(25389205-25389242)
chr3 (356-388)||(22114158-22114190)
chr3 (360-388)||(27101043-27101071)
chr3 (340-388)||(28412870-28412918)
[»] chr7 (49 HSPs)
chr7 (340-388)||(40836583-40836632)
chr7 (385-421)||(1606708-1606744)
chr7 (340-388)||(9027034-9027082)
chr7 (340-388)||(11759527-11759575)
chr7 (340-388)||(22137479-22137527)
chr7 (340-388)||(31153691-31153739)
chr7 (340-388)||(40550229-40550277)
chr7 (340-388)||(40552506-40552554)
chr7 (341-388)||(28487953-28488000)
chr7 (338-388)||(44964-45014)
chr7 (380-421)||(25542857-25542898)
chr7 (380-421)||(28485894-28485935)
chr7 (356-388)||(1502831-1502863)
chr7 (340-388)||(1606779-1606827)
chr7 (385-421)||(3036053-3036089)
chr7 (381-421)||(7094380-7094420)
chr7 (340-388)||(7469864-7469912)
chr7 (385-421)||(7469946-7469982)
chr7 (340-388)||(7471821-7471869)
chr7 (385-421)||(7471904-7471940)
chr7 (385-421)||(11759456-11759492)
chr7 (385-421)||(18345870-18345906)
chr7 (385-421)||(20297691-20297727)
chr7 (340-388)||(20297762-20297810)
chr7 (385-421)||(20299789-20299825)
chr7 (340-388)||(20626433-20626481)
chr7 (340-388)||(20630324-20630372)
chr7 (340-388)||(20642743-20642791)
chr7 (340-388)||(25542928-25542976)
chr7 (385-421)||(38394315-38394351)
chr7 (340-388)||(38394386-38394434)
chr7 (356-388)||(38397039-38397071)
chr7 (385-421)||(40836667-40836703)
chr7 (356-388)||(48458053-48458085)
chr7 (357-388)||(1046775-1046806)
chr7 (357-388)||(7349135-7349166)
chr7 (357-388)||(7351509-7351540)
chr7 (357-388)||(20299860-20299891)
chr7 (357-388)||(25276518-25276549)
chr7 (358-388)||(36029-36059)
chr7 (391-421)||(1850310-1850340)
chr7 (358-388)||(1850381-1850411)
chr7 (356-386)||(2935671-2935701)
chr7 (340-388)||(1049129-1049178)
chr7 (339-388)||(43253357-43253405)
chr7 (385-421)||(44893-44929)
chr7 (340-388)||(28485965-28486013)
chr7 (385-421)||(28487882-28487918)
chr7 (385-421)||(48457982-48458018)
[»] scaffold0140 (2 HSPs)
scaffold0140 (340-388)||(22516-22564)
scaffold0140 (340-388)||(24791-24839)
[»] chr6 (35 HSPs)
chr6 (340-388)||(30967626-30967673)
chr6 (339-388)||(29754548-29754597)
chr6 (356-388)||(2628742-2628774)
chr6 (340-388)||(8717195-8717243)
chr6 (340-388)||(11982872-11982920)
chr6 (340-388)||(12195354-12195402)
chr6 (385-421)||(14458691-14458727)
chr6 (385-421)||(14507100-14507136)
chr6 (340-388)||(18322518-18322566)
chr6 (340-388)||(26065961-26066009)
chr6 (340-388)||(26068235-26068283)
chr6 (356-388)||(28241178-28241210)
chr6 (385-421)||(28241245-28241281)
chr6 (385-421)||(30967555-30967591)
chr6 (385-421)||(33309210-33309246)
chr6 (356-388)||(33309282-33309314)
chr6 (385-421)||(33311479-33311515)
chr6 (356-388)||(33311551-33311583)
chr6 (357-388)||(1230106-1230137)
chr6 (357-388)||(4816088-4816119)
chr6 (357-388)||(5273073-5273104)
chr6 (357-388)||(26065407-26065438)
chr6 (357-388)||(26085376-26085407)
chr6 (357-388)||(26932420-26932451)
chr6 (358-388)||(19704422-19704452)
chr6 (340-388)||(9020349-9020398)
chr6 (340-388)||(13057610-13057659)
chr6 (340-393)||(14458607-14458660)
chr6 (388-417)||(20915283-20915312)
chr6 (340-388)||(26887077-26887126)
chr6 (344-388)||(30728673-30728718)
chr6 (393-421)||(5273148-5273176)
chr6 (360-388)||(14507037-14507065)
chr6 (385-417)||(19704489-19704521)
chr6 (356-388)||(30034462-30034494)
[»] chr1 (38 HSPs)
chr1 (340-388)||(23816275-23816323)
chr1 (385-421)||(47177681-47177717)
chr1 (385-421)||(47180032-47180068)
chr1 (340-388)||(47906656-47906704)
chr1 (339-388)||(9459276-9459325)
chr1 (339-388)||(9463103-9463152)
chr1 (340-388)||(13762226-13762275)
chr1 (339-388)||(16231954-16232003)
chr1 (385-421)||(2617836-2617872)
chr1 (385-421)||(10399754-10399790)
chr1 (356-388)||(13358964-13358996)
chr1 (356-388)||(13447132-13447164)
chr1 (385-421)||(13447199-13447235)
chr1 (385-421)||(13762155-13762191)
chr1 (356-388)||(15294693-15294725)
chr1 (385-421)||(15294760-15294796)
chr1 (340-388)||(16226559-16226607)
chr1 (385-421)||(20291775-20291811)
chr1 (356-388)||(20291847-20291879)
chr1 (385-421)||(20302760-20302796)
chr1 (340-388)||(23786230-23786278)
chr1 (340-388)||(24326053-24326101)
chr1 (340-388)||(46431548-46431596)
chr1 (385-421)||(46431631-46431667)
chr1 (385-421)||(51750358-51750394)
chr1 (357-388)||(47177753-47177784)
chr1 (357-388)||(47180104-47180135)
chr1 (357-388)||(51750429-51750460)
chr1 (338-386)||(2510182-2510231)
chr1 (340-388)||(6995540-6995589)
chr1 (340-388)||(10399669-10399718)
chr1 (340-388)||(18839973-18840022)
chr1 (340-388)||(39462907-39462956)
chr1 (356-388)||(20302832-20302864)
chr1 (356-388)||(28842884-28842916)
chr1 (340-388)||(31490297-31490345)
chr1 (340-388)||(31735365-31735413)
chr1 (340-388)||(51757925-51757973)
[»] scaffold0068 (2 HSPs)
scaffold0068 (339-388)||(29569-29617)
scaffold0068 (385-421)||(29498-29534)
[»] scaffold0005 (4 HSPs)
scaffold0005 (380-421)||(183560-183601)
scaffold0005 (358-388)||(183500-183530)
scaffold0005 (340-388)||(50408-50457)
scaffold0005 (340-388)||(52407-52456)
[»] chr2 (20 HSPs)
chr2 (340-389)||(45332020-45332069)
chr2 (385-421)||(13909969-13910005)
chr2 (356-388)||(19501858-19501890)
chr2 (356-388)||(19504193-19504225)
chr2 (356-388)||(23452093-23452125)
chr2 (385-421)||(35217893-35217929)
chr2 (340-388)||(36560981-36561029)
chr2 (356-388)||(42453843-42453875)
chr2 (385-421)||(45279925-45279961)
chr2 (357-388)||(35215450-35215481)
chr2 (357-388)||(35217827-35217858)
chr2 (391-421)||(24162153-24162183)
chr2 (342-388)||(45279844-45279890)
chr2 (388-421)||(35215519-35215552)
chr2 (340-388)||(43623423-43623472)
chr2 (385-421)||(23452161-23452197)
chr2 (360-388)||(24162084-24162112)
chr2 (385-421)||(27105092-27105128)
chr2 (340-388)||(36558721-36558769)
chr2 (385-421)||(42064793-42064829)
[»] scaffold1674 (2 HSPs)
scaffold1674 (385-421)||(1375-1411)
scaffold1674 (357-388)||(1309-1340)
[»] scaffold0472 (2 HSPs)
scaffold0472 (340-388)||(6598-6646)
scaffold0472 (385-421)||(6527-6562)
[»] scaffold0267 (2 HSPs)
scaffold0267 (340-388)||(425-473)
scaffold0267 (385-417)||(357-389)
[»] scaffold0250 (1 HSPs)
scaffold0250 (356-388)||(3278-3310)
[»] scaffold0131 (1 HSPs)
scaffold0131 (356-388)||(14246-14278)
[»] scaffold0038 (2 HSPs)
scaffold0038 (356-388)||(41340-41372)
scaffold0038 (385-421)||(41407-41443)
[»] scaffold1899 (1 HSPs)
scaffold1899 (357-388)||(14-45)
[»] scaffold0891 (1 HSPs)
scaffold0891 (385-420)||(4601-4636)
[»] scaffold0370 (1 HSPs)
scaffold0370 (357-388)||(1310-1341)
[»] scaffold0154 (1 HSPs)
scaffold0154 (360-388)||(11335-11363)
[»] scaffold0127 (1 HSPs)
scaffold0127 (340-388)||(12715-12763)


Alignment Details
Target: chr8 (Bit Score: 316; Significance: 1e-178; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 316; E-Value: 1e-178
Query Start/End: Original strand, 8 - 336
Target Start/End: Original strand, 34318391 - 34318721
Alignment:
Q  8 agattattcttagcatgatatttgattctgtcttgccttttcatgcatcttcaacgaaagtccaactccgcaaatgaaataactgcttactattaggtat 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34318391 agattattcttagcatgatatttgattctgtcttgccttttcatgcatcttcaacgaaagtccaactccgcaaatgaaataactgcttactattaggtat 34318490  T
Q  108 ttt--ttcccttgttagataggattttgataatgaaaaacatatagaaaaggatatgatgtctgatgaggaaacattaagcttatcaataagcttgtttt 205  Q
    |||  ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34318491 tttttttcccttgttagataggatttcgataatgaaaaacatatagaaaaggatatgatgtctgatgaggaaacattaagcttatcaataagcttgtttt 34318590  T
Q  206 ctttcttaatgctaccaacttggtagttcgagaagcattttcgcacgtttgtaattttgtaaaccaacaatggttcatagcaaaatgcttgctgaatcac 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34318591 ctttcttaatgctaccaacttggtagttcgagaagcattttcgcacgtttgtaattttgtaaaccaacaatggttcatagcaaaatgcttgctgaatcac 34318690  T
Q  306 gcaagtaaattcatcattgcaaaagaaatgt 336  Q
    |||||||||||||||||||||||||||||||    
T  34318691 gcaagtaaattcatcattgcaaaagaaatgt 34318721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 340 - 388
Target Start/End: Complemental strand, 3874487 - 3874439
Alignment:
Q  340 tgttgcgaattcgtcggaaaatcacaccaataacaacttgatgtgtgga 388  Q
    ||||| |||||||| | ||||||||||||||||||||||||||||||||    
T  3874487 tgttgtgaattcgttgaaaaatcacaccaataacaacttgatgtgtgga 3874439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 340 - 388
Target Start/End: Complemental strand, 18811202 - 18811154
Alignment:
Q  340 tgttgcgaattcgtcggaaaatcacaccaataacaacttgatgtgtgga 388  Q
    |||||||||||||  | ||||||||||||||||||||||||||||||||    
T  18811202 tgttgcgaattcgatgaaaaatcacaccaataacaacttgatgtgtgga 18811154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 340 - 388
Target Start/End: Original strand, 28283062 - 28283110
Alignment:
Q  340 tgttgcgaattcgtcggaaaatcacaccaataacaacttgatgtgtgga 388  Q
    |||||||||||||  | ||||||||||||||||||||||||||||||||    
T  28283062 tgttgcgaattcgatgaaaaatcacaccaataacaacttgatgtgtgga 28283110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 339 - 388
Target Start/End: Complemental strand, 15809712 - 15809664
Alignment:
Q  339 ctgttgcgaattcgtcggaaaatcacaccaataacaacttgatgtgtgga 388  Q
    ||||||||||||||  | ||||||||||||||||||||||||||||||||    
T  15809712 ctgttgcgaattcgatg-aaaatcacaccaataacaacttgatgtgtgga 15809664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 339 - 388
Target Start/End: Original strand, 24873038 - 24873087
Alignment:
Q  339 ctgttgcgaattcgtcggaaaatcacaccaataacaacttgatgtgtgga 388  Q
    |||||| |||||||  | ||||||||||||||||||||||||||||||||    
T  24873038 ctgttgtgaattcgatgaaaaatcacaccaataacaacttgatgtgtgga 24873087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 3874404 - 3874368
Alignment:
Q  385 tggaataattaaatacaagccaaaagtagaaaacaac 421  Q
    ||||| |||||||||||||||||||||||||||||||    
T  3874404 tggaacaattaaatacaagccaaaagtagaaaacaac 3874368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 340 - 388
Target Start/End: Original strand, 3883436 - 3883484
Alignment:
Q  340 tgttgcgaattcgtcggaaaatcacaccaataacaacttgatgtgtgga 388  Q
    |||||||||||||  | ||||||||| ||||||||||||||||||||||    
T  3883436 tgttgcgaattcgatgaaaaatcacatcaataacaacttgatgtgtgga 3883484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 3883519 - 3883555
Alignment:
Q  385 tggaataattaaatacaagccaaaagtagaaaacaac 421  Q
    ||||| |||||||||||||||||||||||||||||||    
T  3883519 tggaacaattaaatacaagccaaaagtagaaaacaac 3883555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 4424429 - 4424393
Alignment:
Q  385 tggaataattaaatacaagccaaaagtagaaaacaac 421  Q
    ||||| |||||||||||||||||||||||||||||||    
T  4424429 tggaacaattaaatacaagccaaaagtagaaaacaac 4424393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 22684577 - 22684613
Alignment:
Q  385 tggaataattaaatacaagccaaaagtagaaaacaac 421  Q
    ||||| |||||||||||||||||||||||||||||||    
T  22684577 tggaacaattaaatacaagccaaaagtagaaaacaac 22684613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 340 - 388
Target Start/End: Complemental strand, 43530609 - 43530561
Alignment:
Q  340 tgttgcgaattcgtcggaaaatcacaccaataacaacttgatgtgtgga 388  Q
    ||||||||||||   | ||||||||||||||||||||||||||||||||    
T  43530609 tgttgcgaattcaatgaaaaatcacaccaataacaacttgatgtgtgga 43530561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 44721254 - 44721218
Alignment:
Q  385 tggaataattaaatacaagccaaaagtagaaaacaac 421  Q
    ||||||||||||||||||| |||||||||||||||||    
T  44721254 tggaataattaaatacaagtcaaaagtagaaaacaac 44721218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 357 - 388
Target Start/End: Original strand, 22684510 - 22684541
Alignment:
Q  357 aaaatcacaccaataacaacttgatgtgtgga 388  Q
    ||||||||||||||||||||||||||||||||    
T  22684510 aaaatcacaccaataacaacttgatgtgtgga 22684541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 357 - 388
Target Start/End: Original strand, 28251428 - 28251459
Alignment:
Q  357 aaaatcacaccaataacaacttgatgtgtgga 388  Q
    ||||||||||||||||||||||||||||||||    
T  28251428 aaaatcacaccaataacaacttgatgtgtgga 28251459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 356 - 387
Target Start/End: Complemental strand, 32339788 - 32339757
Alignment:
Q  356 gaaaatcacaccaataacaacttgatgtgtgg 387  Q
    ||||||||||||||||||||||||||||||||    
T  32339788 gaaaatcacaccaataacaacttgatgtgtgg 32339757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 357 - 388
Target Start/End: Complemental strand, 43080079 - 43080048
Alignment:
Q  357 aaaatcacaccaataacaacttgatgtgtgga 388  Q
    ||||||||||||||||||||||||||||||||    
T  43080079 aaaatcacaccaataacaacttgatgtgtgga 43080048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 357 - 388
Target Start/End: Complemental strand, 43082450 - 43082419
Alignment:
Q  357 aaaatcacaccaataacaacttgatgtgtgga 388  Q
    ||||||||||||||||||||||||||||||||    
T  43082450 aaaatcacaccaataacaacttgatgtgtgga 43082419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 385 - 420
Target Start/End: Complemental strand, 43530526 - 43530491
Alignment:
Q  385 tggaataattaaatacaagccaaaagtagaaaacaa 420  Q
    ||||| ||||||||||||||||||||||||||||||    
T  43530526 tggaacaattaaatacaagccaaaagtagaaaacaa 43530491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 391 - 421
Target Start/End: Complemental strand, 609140 - 609110
Alignment:
Q  391 aattaaatacaagccaaaagtagaaaacaac 421  Q
    |||||||||||||||||||||||||||||||    
T  609140 aattaaatacaagccaaaagtagaaaacaac 609110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 381
Target Start/End: Complemental strand, 18813377 - 18813335
Alignment:
Q  339 ctgttgcgaattcgtcggaaaatcacaccaataacaacttgat 381  Q
    ||||||||||||||  | |||||||||||||||||||||||||    
T  18813377 ctgttgcgaattcgatgaaaaatcacaccaataacaacttgat 18813335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 388
Target Start/End: Complemental strand, 15073202 - 15073153
Alignment:
Q  340 tgttgcgaattcgtcggaaaatcacaccaataac-aacttgatgtgtgga 388  Q
    |||||||||||||  | ||||||||||||||||| |||||||||||||||    
T  15073202 tgttgcgaattcgatgaaaaatcacaccaataacaaacttgatgtgtgga 15073153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 385 - 418
Target Start/End: Complemental strand, 18811118 - 18811085
Alignment:
Q  385 tggaataattaaatacaagccaaaagtagaaaac 418  Q
    ||||| ||||||||||||||||||||||||||||    
T  18811118 tggaacaattaaatacaagccaaaagtagaaaac 18811085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 385 - 418
Target Start/End: Complemental strand, 18813292 - 18813259
Alignment:
Q  385 tggaataattaaatacaagccaaaagtagaaaac 418  Q
    ||||| ||||||||||||||||||||||||||||    
T  18813292 tggaacaattaaatacaagccaaaagtagaaaac 18813259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 359 - 388
Target Start/End: Complemental strand, 44721318 - 44721289
Alignment:
Q  359 aatcacaccaataacaacttgatgtgtgga 388  Q
    ||||||||||||||||||||||||||||||    
T  44721318 aatcacaccaataacaacttgatgtgtgga 44721289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 388
Target Start/End: Complemental strand, 4424497 - 4424465
Alignment:
Q  356 gaaaatcacaccaataacaacttgatgtgtgga 388  Q
    |||||||||||||||||||||||| ||||||||    
T  4424497 gaaaatcacaccaataacaacttggtgtgtgga 4424465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 27827396 - 27827360
Alignment:
Q  385 tggaataattaaatacaagccaaaagtagaaaacaac 421  Q
    ||||| ||||||||||||| |||||||||||||||||    
T  27827396 tggaacaattaaatacaagtcaaaagtagaaaacaac 27827360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 337 - 388
Target Start/End: Complemental strand, 27829793 - 27829742
Alignment:
Q  337 cactgttgcgaattcgtcggaaaatcacaccaataac-aacttgatgtgtgga 388  Q
    ||||||||||||||||  | ||||||||||||||||| |||||||||||||||    
T  27829793 cactgttgcgaattcgatg-aaaatcacaccaataacaaacttgatgtgtgga 27829742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 340 - 388
Target Start/End: Original strand, 22782577 - 22782625
Alignment:
Q  340 tgttgcgaattcgtcggaaaatcacaccaataacaacttgatgtgtgga 388  Q
    ||||||||||||| || ||||||||||||||||||||||||||||||||    
T  22782577 tgttgcgaattcgacgaaaaatcacaccaataacaacttgatgtgtgga 22782625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 338 - 388
Target Start/End: Original strand, 17662090 - 17662139
Alignment:
Q  338 actgttgcgaattcgtcggaaaatcacaccaataacaacttgatgtgtgga 388  Q
    |||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  17662090 actgttgcgaattcgttg-aaaatcacaccaataacaacttgatgtgtgga 17662139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 330 - 388
Target Start/End: Original strand, 47210627 - 47210685
Alignment:
Q  330 gaaatgtcactgttgcgaattcgtcggaaaatcacaccaataacaacttgatgtgtgga 388  Q
    ||||||| | |||||||||||||| |  |||||||||||||||||||||||||||||||    
T  47210627 gaaatgtaattgttgcgaattcgttgtgaaatcacaccaataacaacttgatgtgtgga 47210685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 340 - 388
Target Start/End: Original strand, 9176315 - 9176362
Alignment:
Q  340 tgttgcgaattcgtcggaaaatcacaccaataacaacttgatgtgtgga 388  Q
    ||||||||||||| || ||||||||||||||||||||||||||||||||    
T  9176315 tgttgcgaattcgacg-aaaatcacaccaataacaacttgatgtgtgga 9176362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 16931714 - 16931750
Alignment:
Q  385 tggaataattaaatacaagccaaaagtagaaaacaac 421  Q
    |||||||||||||||||||||||||||||||||||||    
T  16931714 tggaataattaaatacaagccaaaagtagaaaacaac 16931750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 16934068 - 16934104
Alignment:
Q  385 tggaataattaaatacaagccaaaagtagaaaacaac 421  Q
    |||||||||||||||||||||||||||||||||||||    
T  16934068 tggaataattaaatacaagccaaaagtagaaaacaac 16934104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 340 - 388
Target Start/End: Original strand, 22780212 - 22780260
Alignment:
Q  340 tgttgcgaattcgtcggaaaatcacaccaataacaacttgatgtgtgga 388  Q
    |||||||||||||  | ||||||||||||||||||||||||||||||||    
T  22780212 tgttgcgaattcgatgaaaaatcacaccaataacaacttgatgtgtgga 22780260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 340 - 388
Target Start/End: Original strand, 44599680 - 44599728
Alignment:
Q  340 tgttgcgaattcgtcggaaaatcacaccaataacaacttgatgtgtgga 388  Q
    |||||||||||||  | ||||||||||||||||||||||||||||||||    
T  44599680 tgttgcgaattcgatgaaaaatcacaccaataacaacttgatgtgtgga 44599728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 340 - 388
Target Start/End: Complemental strand, 47868894 - 47868846
Alignment:
Q  340 tgttgcgaattcgtcggaaaatcacaccaataacaacttgatgtgtgga 388  Q
    |||||||||||||  | ||||||||||||||||||||||||||||||||    
T  47868894 tgttgcgaattcgatgaaaaatcacaccaataacaacttgatgtgtgga 47868846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 334 - 388
Target Start/End: Complemental strand, 40637572 - 40637517
Alignment:
Q  334 tgtcactgttgcgaattcgtcg-gaaaatcacaccaataacaacttgatgtgtgga 388  Q
    |||| ||||||||||||||| | ||| |||||||||||||||||||||||||||||    
T  40637572 tgtccctgttgcgaattcgttgagaatatcacaccaataacaacttgatgtgtgga 40637517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 338 - 388
Target Start/End: Original strand, 5635316 - 5635365
Alignment:
Q  338 actgttgcgaattcgtcggaaaatcacaccaataacaacttgatgtgtgga 388  Q
    |||||||||||||||  | ||||||||||||||||||||||||||||||||    
T  5635316 actgttgcgaattcgatg-aaaatcacaccaataacaacttgatgtgtgga 5635365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 380 - 421
Target Start/End: Complemental strand, 14633732 - 14633691
Alignment:
Q  380 atgtgtggaataattaaatacaagccaaaagtagaaaacaac 421  Q
    |||| ||||| |||||||||||||||||||||||||||||||    
T  14633732 atgtatggaacaattaaatacaagccaaaagtagaaaacaac 14633691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 340 - 388
Target Start/End: Original strand, 22046526 - 22046575
Alignment:
Q  340 tgttgcgaattcg-tcggaaaatcacaccaataacaacttgatgtgtgga 388  Q
    ||||| ||||||| ||| ||||||||||||||||||||||||||||||||    
T  22046526 tgttgtgaattcgatcgaaaaatcacaccaataacaacttgatgtgtgga 22046575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 339 - 388
Target Start/End: Original strand, 31849439 - 31849487
Alignment:
Q  339 ctgttgcgaattcgtcggaaaatcacaccaataacaacttgatgtgtgga 388  Q
    ||||||||||||||  | ||||||||||||||||||||||||||||||||    
T  31849439 ctgttgcgaattcgatg-aaaatcacaccaataacaacttgatgtgtgga 31849487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 356 - 388
Target Start/End: Original strand, 2484730 - 2484762
Alignment:
Q  356 gaaaatcacaccaataacaacttgatgtgtgga 388  Q
    |||||||||||||||||||||||||||||||||    
T  2484730 gaaaatcacaccaataacaacttgatgtgtgga 2484762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 2484797 - 2484833
Alignment:
Q  385 tggaataattaaatacaagccaaaagtagaaaacaac 421  Q
    ||||| |||||||||||||||||||||||||||||||    
T  2484797 tggaacaattaaatacaagccaaaagtagaaaacaac 2484833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 340 - 384
Target Start/End: Original strand, 3937126 - 3937170
Alignment:
Q  340 tgttgcgaattcgtcggaaaatcacaccaataacaacttgatgtg 384  Q
    |||||||||||||  | ||||||||||||||||||||||||||||    
T  3937126 tgttgcgaattcgatgaaaaatcacaccaataacaacttgatgtg 3937170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 5635400 - 5635436
Alignment:
Q  385 tggaataattaaatacaagccaaaagtagaaaacaac 421  Q
    ||||| |||||||||||||||||||||||||||||||    
T  5635400 tggaacaattaaatacaagccaaaagtagaaaacaac 5635436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 356 - 388
Target Start/End: Original strand, 8631275 - 8631307
Alignment:
Q  356 gaaaatcacaccaataacaacttgatgtgtgga 388  Q
    |||||||||||||||||||||||||||||||||    
T  8631275 gaaaatcacaccaataacaacttgatgtgtgga 8631307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 9148644 - 9148608
Alignment:
Q  385 tggaataattaaatacaagccaaaagtagaaaacaac 421  Q
    ||||| |||||||||||||||||||||||||||||||    
T  9148644 tggaacaattaaatacaagccaaaagtagaaaacaac 9148608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 385 - 417
Target Start/End: Original strand, 9176397 - 9176429
Alignment:
Q  385 tggaataattaaatacaagccaaaagtagaaaa 417  Q
    |||||||||||||||||||||||||||||||||    
T  9176397 tggaataattaaatacaagccaaaagtagaaaa 9176429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 11437771 - 11437735
Alignment:
Q  385 tggaataattaaatacaagccaaaagtagaaaacaac 421  Q
    ||||| |||||||||||||||||||||||||||||||    
T  11437771 tggaacaattaaatacaagccaaaagtagaaaacaac 11437735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 356 - 388
Target Start/End: Complemental strand, 24348677 - 24348645
Alignment:
Q  356 gaaaatcacaccaataacaacttgatgtgtgga 388  Q
    |||||||||||||||||||||||||||||||||    
T  24348677 gaaaatcacaccaataacaacttgatgtgtgga 24348645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 37089296 - 37089332
Alignment:
Q  385 tggaataattaaatacaagccaaaagtagaaaacaac 421  Q
    ||||| |||||||||||||||||||||||||||||||    
T  37089296 tggaacaattaaatacaagccaaaagtagaaaacaac 37089332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 38409613 - 38409577
Alignment:
Q  385 tggaataattaaatacaagccaaaagtagaaaacaac 421  Q
    ||||| |||||||||||||||||||||||||||||||    
T  38409613 tggaacaattaaatacaagccaaaagtagaaaacaac 38409577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 44599762 - 44599798
Alignment:
Q  385 tggaataattaaatacaagccaaaagtagaaaacaac 421  Q
    ||||||||||||||||||| |||||||||||||||||    
T  44599762 tggaataattaaatacaaggcaaaagtagaaaacaac 44599798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 51015654 - 51015618
Alignment:
Q  385 tggaataattaaatacaagccaaaagtagaaaacaac 421  Q
    ||||| |||||||||||||||||||||||||||||||    
T  51015654 tggaacaattaaatacaagccaaaagtagaaaacaac 51015618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 385 - 420
Target Start/End: Complemental strand, 11435363 - 11435328
Alignment:
Q  385 tggaataattaaatacaagccaaaagtagaaaacaa 420  Q
    ||||| ||||||||||||||||||||||||||||||    
T  11435363 tggaacaattaaatacaagccaaaagtagaaaacaa 11435328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 357 - 388
Target Start/End: Complemental strand, 11435430 - 11435399
Alignment:
Q  357 aaaatcacaccaataacaacttgatgtgtgga 388  Q
    ||||||||||||||||||||||||||||||||    
T  11435430 aaaatcacaccaataacaacttgatgtgtgga 11435399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 357 - 388
Target Start/End: Complemental strand, 18847627 - 18847596
Alignment:
Q  357 aaaatcacaccaataacaacttgatgtgtgga 388  Q
    ||||||||||||||||||||||||||||||||    
T  18847627 aaaatcacaccaataacaacttgatgtgtgga 18847596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 338 - 388
Target Start/End: Original strand, 37089210 - 37089261
Alignment:
Q  338 actgttgcgaattcgtcggaaaatcacaccaataac-aacttgatgtgtgga 388  Q
    |||||||||||||||  | ||||||||||||||||| |||||||||||||||    
T  37089210 actgttgcgaattcgatgaaaaatcacaccaataacaaacttgatgtgtgga 37089261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 385 - 420
Target Start/End: Original strand, 47210720 - 47210755
Alignment:
Q  385 tggaataattaaatacaagccaaaagtagaaaacaa 420  Q
    ||||| ||||||||||||||||||||||||||||||    
T  47210720 tggaacaattaaatacaagccaaaagtagaaaacaa 47210755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 358 - 388
Target Start/End: Complemental strand, 14633792 - 14633762
Alignment:
Q  358 aaatcacaccaataacaacttgatgtgtgga 388  Q
    |||||||||||||||||||||||||||||||    
T  14633792 aaatcacaccaataacaacttgatgtgtgga 14633762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 391 - 421
Target Start/End: Original strand, 22044321 - 22044351
Alignment:
Q  391 aattaaatacaagccaaaagtagaaaacaac 421  Q
    |||||||||||||||||||||||||||||||    
T  22044321 aattaaatacaagccaaaagtagaaaacaac 22044351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 388
Target Start/End: Complemental strand, 7941815 - 7941767
Alignment:
Q  339 ctgttgcgaattcgtcggaaaatcacaccaataacaacttgatgtgtgga 388  Q
    ||||||||||||||  | ||||||||||||| ||||||||||||||||||    
T  7941815 ctgttgcgaattcgatg-aaaatcacaccaacaacaacttgatgtgtgga 7941767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 389
Target Start/End: Complemental strand, 9148727 - 9148678
Alignment:
Q  340 tgttgcgaattcgtcggaaaatcacaccaataacaacttgatgtgtggaa 389  Q
    |||||||||||||  |  ||| ||||||||||||||||||||||||||||    
T  9148727 tgttgcgaattcgatgagaaaacacaccaataacaacttgatgtgtggaa 9148678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 388 - 417
Target Start/End: Original strand, 9174072 - 9174101
Alignment:
Q  388 aataattaaatacaagccaaaagtagaaaa 417  Q
    ||||||||||||||||||||||||||||||    
T  9174072 aataattaaatacaagccaaaagtagaaaa 9174101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 388
Target Start/End: Original strand, 14787274 - 14787323
Alignment:
Q  340 tgttgcgaattcgtcggaaaatcacaccaataac-aacttgatgtgtgga 388  Q
    |||||||||||||  | ||||||||||||||||| |||||||||||||||    
T  14787274 tgttgcgaattcgatgaaaaatcacaccaataacaaacttgatgtgtgga 14787323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 388
Target Start/End: Original strand, 14789273 - 14789322
Alignment:
Q  340 tgttgcgaattcgtcggaaaatcacaccaataac-aacttgatgtgtgga 388  Q
    |||||||||||||  | ||||||||||||||||| |||||||||||||||    
T  14789273 tgttgcgaattcgatgaaaaatcacaccaataacaaacttgatgtgtgga 14789322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 18847562 - 18847525
Alignment:
Q  385 tggaataattaaatacaagcc-aaaagtagaaaacaac 421  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  18847562 tggaataattaaatacaagccaaaaagtagaaaacaac 18847525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 359 - 388
Target Start/End: Original strand, 22132248 - 22132277
Alignment:
Q  359 aatcacaccaataacaacttgatgtgtgga 388  Q
    ||||||||||||||||||||||||||||||    
T  22132248 aatcacaccaataacaacttgatgtgtgga 22132277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 359 - 388
Target Start/End: Original strand, 22134476 - 22134505
Alignment:
Q  359 aatcacaccaataacaacttgatgtgtgga 388  Q
    ||||||||||||||||||||||||||||||    
T  22134476 aatcacaccaataacaacttgatgtgtgga 22134505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 388
Target Start/End: Complemental strand, 24889286 - 24889237
Alignment:
Q  340 tgttgcgaattcgtcggaaa-atcacaccaataacaacttgatgtgtgga 388  Q
    |||||||||||||  | ||| |||||||||||||||||||||||||||||    
T  24889286 tgttgcgaattcgatgaaaatatcacaccaataacaacttgatgtgtgga 24889237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 359 - 388
Target Start/End: Original strand, 26085836 - 26085865
Alignment:
Q  359 aatcacaccaataacaacttgatgtgtgga 388  Q
    ||||||||||||||||||||||||||||||    
T  26085836 aatcacaccaataacaacttgatgtgtgga 26085865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 388
Target Start/End: Original strand, 36921338 - 36921387
Alignment:
Q  340 tgttgcgaattcgtcggaaaatcacaccaataac-aacttgatgtgtgga 388  Q
    |||||||||||||  | ||||||||||||||||| |||||||||||||||    
T  36921338 tgttgcgaattcgatgaaaaatcacaccaataacaaacttgatgtgtgga 36921387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 388
Target Start/End: Original strand, 38928024 - 38928073
Alignment:
Q  340 tgttgcgaattcgtcggaaaatcacaccaataac-aacttgatgtgtgga 388  Q
    |||||||||||||  | ||||||||||||||||| |||||||||||||||    
T  38928024 tgttgcgaattcgatgaaaaatcacaccaataacaaacttgatgtgtgga 38928073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 388
Target Start/End: Complemental strand, 51015738 - 51015689
Alignment:
Q  340 tgttgcgaattcgt-cggaaaatcacaccaataacaacttgatgtgtgga 388  Q
    ||||| |||||||| || |||| |||||||||||||||||||||||||||    
T  51015738 tgttgtgaattcgttcgaaaaaacacaccaataacaacttgatgtgtgga 51015689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 417
Target Start/End: Complemental strand, 5198813 - 5198781
Alignment:
Q  385 tggaataattaaatacaagccaaaagtagaaaa 417  Q
    ||||| |||||||||||||||||||||||||||    
T  5198813 tggaacaattaaatacaagccaaaagtagaaaa 5198781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 388
Target Start/End: Complemental strand, 5198880 - 5198848
Alignment:
Q  356 gaaaatcacaccaataacaacttgatgtgtgga 388  Q
    ||||||||||||||||| |||||||||||||||    
T  5198880 gaaaatcacaccaataataacttgatgtgtgga 5198848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 417
Target Start/End: Original strand, 8631342 - 8631374
Alignment:
Q  385 tggaataattaaatacaagccaaaagtagaaaa 417  Q
    ||||| |||||||||||||||||||||||||||    
T  8631342 tggaacaattaaatacaagccaaaagtagaaaa 8631374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 388
Target Start/End: Original strand, 9174002 - 9174034
Alignment:
Q  356 gaaaatcacaccaataacaacttgatgtgtgga 388  Q
    ||||||||||| |||||||||||||||||||||    
T  9174002 gaaaatcacactaataacaacttgatgtgtgga 9174034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 388
Target Start/End: Original strand, 11006110 - 11006142
Alignment:
Q  356 gaaaatcacaccaataacaacttgatgtgtgga 388  Q
    ||||| |||||||||||||||||||||||||||    
T  11006110 gaaaaacacaccaataacaacttgatgtgtgga 11006142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 388
Target Start/End: Original strand, 11008424 - 11008456
Alignment:
Q  356 gaaaatcacaccaataacaacttgatgtgtgga 388  Q
    ||||| |||||||||||||||||||||||||||    
T  11008424 gaaaaacacaccaataacaacttgatgtgtgga 11008456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 388
Target Start/End: Complemental strand, 11437855 - 11437807
Alignment:
Q  340 tgttgcgaattcgtcggaaaatcacaccaataacaacttgatgtgtgga 388  Q
    ||||| |||||||  | ||||||||||||||||||||||||||| ||||    
T  11437855 tgttgtgaattcgatgaaaaatcacaccaataacaacttgatgtatgga 11437807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 388
Target Start/End: Original strand, 16931631 - 16931679
Alignment:
Q  340 tgttgcgaattcgtcggaaaatcacaccaataacaacttgatgtgtgga 388  Q
    ||||| |||||||  | |||||||||||||||||||||| |||||||||    
T  16931631 tgttgtgaattcgatgaaaaatcacaccaataacaacttaatgtgtgga 16931679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 388
Target Start/End: Original strand, 16933988 - 16934036
Alignment:
Q  340 tgttgcgaattcgtcggaaaatcacaccaataacaacttgatgtgtgga 388  Q
    ||||| |||||||  | |||||||||||||||||||||| |||||||||    
T  16933988 tgttgtgaattcgatgaaaaatcacaccaataacaacttaatgtgtgga 16934036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 22046610 - 22046646
Alignment:
Q  385 tggaataattaaatacaagccaaaagtagaaaacaac 421  Q
    ||||| ||||||||||||| |||||||||||||||||    
T  22046610 tggaacaattaaatacaagtcaaaagtagaaaacaac 22046646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 417
Target Start/End: Original strand, 31849522 - 31849554
Alignment:
Q  385 tggaataattaaatacaagccaaaagtagaaaa 417  Q
    ||||| |||||||||||||||||||||||||||    
T  31849522 tggaacaattaaatacaagccaaaagtagaaaa 31849554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 388
Target Start/End: Complemental strand, 38409680 - 38409648
Alignment:
Q  356 gaaaatcacaccaataacaacttgatgtgtgga 388  Q
    ||||| |||||||||||||||||||||||||||    
T  38409680 gaaaaacacaccaataacaacttgatgtgtgga 38409648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 47868810 - 47868774
Alignment:
Q  385 tggaataattaaatacaagccaaaagtagaaaacaac 421  Q
    ||||| ||| |||||||||||||||||||||||||||    
T  47868810 tggaacaataaaatacaagccaaaagtagaaaacaac 47868774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 338 - 388
Target Start/End: Original strand, 38959970 - 38960020
Alignment:
Q  338 actgttgcgaattcgtcggaaaatcacaccaataacaacttgatgtgtgga 388  Q
    |||||||||||||||  | ||||||||||||||||||||||||||||||||    
T  38959970 actgttgcgaattcgatgaaaaatcacaccaataacaacttgatgtgtgga 38960020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 339 - 388
Target Start/End: Original strand, 23741696 - 23741745
Alignment:
Q  339 ctgttgcgaattcgtcggaaaatcacaccaataacaacttgatgtgtgga 388  Q
    |||||| ||||||| || ||||||||||||||||||||||||||||||||    
T  23741696 ctgttgtgaattcgacgaaaaatcacaccaataacaacttgatgtgtgga 23741745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 340 - 388
Target Start/End: Complemental strand, 4410458 - 4410411
Alignment:
Q  340 tgttgcgaattcgtcggaaaatcacaccaataacaacttgatgtgtgga 388  Q
    |||||||||||||| | ||||||||||||||||||||||||||||||||    
T  4410458 tgttgcgaattcgttg-aaaatcacaccaataacaacttgatgtgtgga 4410411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 340 - 388
Target Start/End: Original strand, 15354414 - 15354462
Alignment:
Q  340 tgttgcgaattcgtcggaaaatcacaccaataacaacttgatgtgtgga 388  Q
    ||||| ||||||| || ||||||||||||||||||||||||||||||||    
T  15354414 tgttgtgaattcgacgaaaaatcacaccaataacaacttgatgtgtgga 15354462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 340 - 388
Target Start/End: Original strand, 15356690 - 15356738
Alignment:
Q  340 tgttgcgaattcgtcggaaaatcacaccaataacaacttgatgtgtgga 388  Q
    ||||| ||||||| || ||||||||||||||||||||||||||||||||    
T  15356690 tgttgtgaattcgacgaaaaatcacaccaataacaacttgatgtgtgga 15356738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 340 - 388
Target Start/End: Complemental strand, 23665484 - 23665436
Alignment:
Q  340 tgttgcgaattcgtcggaaaatcacaccaataacaacttgatgtgtgga 388  Q
    ||||| ||||||| || ||||||||||||||||||||||||||||||||    
T  23665484 tgttgtgaattcgacgaaaaatcacaccaataacaacttgatgtgtgga 23665436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 340 - 388
Target Start/End: Original strand, 23793103 - 23793151
Alignment:
Q  340 tgttgcgaattcgtcggaaaatcacaccaataacaacttgatgtgtgga 388  Q
    ||||| ||||||| || ||||||||||||||||||||||||||||||||    
T  23793103 tgttgtgaattcgacgaaaaatcacaccaataacaacttgatgtgtgga 23793151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 339 - 388
Target Start/End: Original strand, 21684293 - 21684341
Alignment:
Q  339 ctgttgcgaattcgtcggaaaatcacaccaataacaacttgatgtgtgga 388  Q
    ||||||||||||||  | ||||||||||||||||||||||||||||||||    
T  21684293 ctgttgcgaattcgatg-aaaatcacaccaataacaacttgatgtgtgga 21684341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 339 - 388
Target Start/End: Complemental strand, 38882526 - 38882478
Alignment:
Q  339 ctgttgcgaattcgtcggaaaatcacaccaataacaacttgatgtgtgga 388  Q
    ||||||||||||||  | ||||||||||||||||||||||||||||||||    
T  38882526 ctgttgcgaattcgatg-aaaatcacaccaataacaacttgatgtgtgga 38882478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 340 - 388
Target Start/End: Original strand, 3372977 - 3373025
Alignment:
Q  340 tgttgcgaattcgtcggaaaatcacaccaataacaacttgatgtgtgga 388  Q
    ||||| |||||||  | ||||||||||||||||||||||||||||||||    
T  3372977 tgttgtgaattcgatgaaaaatcacaccaataacaacttgatgtgtgga 3373025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 3373061 - 3373097
Alignment:
Q  385 tggaataattaaatacaagccaaaagtagaaaacaac 421  Q
    ||||| |||||||||||||||||||||||||||||||    
T  3373061 tggaacaattaaatacaagccaaaagtagaaaacaac 3373097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 4236983 - 4236947
Alignment:
Q  385 tggaataattaaatacaagccaaaagtagaaaacaac 421  Q
    ||||| |||||||||||||||||||||||||||||||    
T  4236983 tggaacaattaaatacaagccaaaagtagaaaacaac 4236947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 10529022 - 10529058
Alignment:
Q  385 tggaataattaaatacaagccaaaagtagaaaacaac 421  Q
    ||||| |||||||||||||||||||||||||||||||    
T  10529022 tggaacaattaaatacaagccaaaagtagaaaacaac 10529058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 10750054 - 10750018
Alignment:
Q  385 tggaataattaaatacaagccaaaagtagaaaacaac 421  Q
    ||||| |||||||||||||||||||||||||||||||    
T  10750054 tggaacaattaaatacaagccaaaagtagaaaacaac 10750018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 10757530 - 10757494
Alignment:
Q  385 tggaataattaaatacaagccaaaagtagaaaacaac 421  Q
    ||||| |||||||||||||||||||||||||||||||    
T  10757530 tggaacaattaaatacaagccaaaagtagaaaacaac 10757494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 25804379 - 25804343
Alignment:
Q  385 tggaataattaaatacaagccaaaagtagaaaacaac 421  Q
    ||||| |||||||||||||||||||||||||||||||    
T  25804379 tggaacaattaaatacaagccaaaagtagaaaacaac 25804343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 25921397 - 25921433
Alignment:
Q  385 tggaataattaaatacaagccaaaagtagaaaacaac 421  Q
    ||||| |||||||||||||||||||||||||||||||    
T  25921397 tggaacaattaaatacaagccaaaagtagaaaacaac 25921433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 356 - 388
Target Start/End: Original strand, 34476909 - 34476941
Alignment:
Q  356 gaaaatcacaccaataacaacttgatgtgtgga 388  Q
    |||||||||||||||||||||||||||||||||    
T  34476909 gaaaatcacaccaataacaacttgatgtgtgga 34476941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 34476977 - 34477013
Alignment:
Q  385 tggaataattaaatacaagccaaaagtagaaaacaac 421  Q
    ||||| |||||||||||||||||||||||||||||||    
T  34476977 tggaacaattaaatacaagccaaaagtagaaaacaac 34477013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 356 - 388
Target Start/End: Original strand, 34479274 - 34479306
Alignment:
Q  356 gaaaatcacaccaataacaacttgatgtgtgga 388  Q
    |||||||||||||||||||||||||||||||||    
T  34479274 gaaaatcacaccaataacaacttgatgtgtgga 34479306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 38882443 - 38882407
Alignment:
Q  385 tggaataattaaatacaagccaaaagtagaaaacaac 421  Q
    ||||| |||||||||||||||||||||||||||||||    
T  38882443 tggaacaattaaatacaagccaaaagtagaaaacaac 38882407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 340 - 388
Target Start/End: Complemental strand, 39798468 - 39798420
Alignment:
Q  340 tgttgcgaattcgtcggaaaatcacaccaataacaacttgatgtgtgga 388  Q
    |||||||||||||  | ||||||||||||||||||| ||||||||||||    
T  39798468 tgttgcgaattcgatgaaaaatcacaccaataacaatttgatgtgtgga 39798420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 357 - 388
Target Start/End: Complemental strand, 10750121 - 10750090
Alignment:
Q  357 aaaatcacaccaataacaacttgatgtgtgga 388  Q
    ||||||||||||||||||||||||||||||||    
T  10750121 aaaatcacaccaataacaacttgatgtgtgga 10750090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 357 - 388
Target Start/End: Complemental strand, 10757597 - 10757566
Alignment:
Q  357 aaaatcacaccaataacaacttgatgtgtgga 388  Q
    ||||||||||||||||||||||||||||||||    
T  10757597 aaaatcacaccaataacaacttgatgtgtgga 10757566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 391 - 421
Target Start/End: Complemental strand, 2175250 - 2175220
Alignment:
Q  391 aattaaatacaagccaaaagtagaaaacaac 421  Q
    |||||||||||||||||||||||||||||||    
T  2175250 aattaaatacaagccaaaagtagaaaacaac 2175220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 356 - 386
Target Start/End: Complemental strand, 4237050 - 4237020
Alignment:
Q  356 gaaaatcacaccaataacaacttgatgtgtg 386  Q
    |||||||||||||||||||||||||||||||    
T  4237050 gaaaatcacaccaataacaacttgatgtgtg 4237020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 356 - 386
Target Start/End: Original strand, 10528954 - 10528984
Alignment:
Q  356 gaaaatcacaccaataacaacttgatgtgtg 386  Q
    |||||||||||||||||||||||||||||||    
T  10528954 gaaaatcacaccaataacaacttgatgtgtg 10528984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 359 - 388
Target Start/End: Original strand, 25921333 - 25921362
Alignment:
Q  359 aatcacaccaataacaacttgatgtgtgga 388  Q
    ||||||||||||||||||||||||||||||    
T  25921333 aatcacaccaataacaacttgatgtgtgga 25921362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 359 - 388
Target Start/End: Complemental strand, 31543153 - 31543124
Alignment:
Q  359 aatcacaccaataacaacttgatgtgtgga 388  Q
    ||||||||||||||||||||||||||||||    
T  31543153 aatcacaccaataacaacttgatgtgtgga 31543124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 359 - 388
Target Start/End: Complemental strand, 31545502 - 31545473
Alignment:
Q  359 aatcacaccaataacaacttgatgtgtgga 388  Q
    ||||||||||||||||||||||||||||||    
T  31545502 aatcacaccaataacaacttgatgtgtgga 31545473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 388
Target Start/End: Original strand, 36402170 - 36402219
Alignment:
Q  340 tgttgcgaattcgtcggaaaatcacaccaataac-aacttgatgtgtgga 388  Q
    |||||||||||||  | ||||||||||||||||| |||||||||||||||    
T  36402170 tgttgcgaattcgatgaaaaatcacaccaataacaaacttgatgtgtgga 36402219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 21684376 - 21684412
Alignment:
Q  385 tggaataattaaatacaagccaaaagtagaaaacaac 421  Q
    ||||| ||||||||| |||||||||||||||||||||    
T  21684376 tggaacaattaaataaaagccaaaagtagaaaacaac 21684412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 388
Target Start/End: Complemental strand, 25804442 - 25804414
Alignment:
Q  360 atcacaccaataacaacttgatgtgtgga 388  Q
    |||||||||||||||||||||||||||||    
T  25804442 atcacaccaataacaacttgatgtgtgga 25804414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 388
Target Start/End: Original strand, 31179213 - 31179261
Alignment:
Q  340 tgttgcgaattcgtcggaaaatcacaccaataacaacttgatgtgtgga 388  Q
    ||||| |||||||  | ||||||||||||||||||||||||||| ||||    
T  31179213 tgttgtgaattcgatgaaaaatcacaccaataacaacttgatgtatgga 31179261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 34479342 - 34479378
Alignment:
Q  385 tggaataattaaatacaagccaaaagtagaaaacaac 421  Q
    ||||| |||||||| ||||||||||||||||||||||    
T  34479342 tggaacaattaaatgcaagccaaaagtagaaaacaac 34479378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 338 - 388
Target Start/End: Original strand, 9604445 - 9604495
Alignment:
Q  338 actgttgcgaattcgtcggaaaatcacaccaataacaacttgatgtgtgga 388  Q
    |||||||||||||||  | ||||||||||||||||||||||||||||||||    
T  9604445 actgttgcgaattcgatgaaaaatcacaccaataacaacttgatgtgtgga 9604495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 340 - 388
Target Start/End: Original strand, 5522466 - 5522513
Alignment:
Q  340 tgttgcgaattcgtcggaaaatcacaccaataacaacttgatgtgtgga 388  Q
    |||||||||||||| | ||||||||||||||||||||||||||||||||    
T  5522466 tgttgcgaattcgttg-aaaatcacaccaataacaacttgatgtgtgga 5522513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 340 - 388
Target Start/End: Original strand, 6065633 - 6065681
Alignment:
Q  340 tgttgcgaattcgtcggaaaatcacaccaataacaacttgatgtgtgga 388  Q
    |||||||||||||  | ||||||||||||||||||||||||||||||||    
T  6065633 tgttgcgaattcgatgaaaaatcacaccaataacaacttgatgtgtgga 6065681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 340 - 388
Target Start/End: Complemental strand, 25533842 - 25533794
Alignment:
Q  340 tgttgcgaattcgtcggaaaatcacaccaataacaacttgatgtgtgga 388  Q
    |||||||||||||  | ||||||||||||||||||||||||||||||||    
T  25533842 tgttgcgaattcgatgaaaaatcacaccaataacaacttgatgtgtgga 25533794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 38210706 - 38210670
Alignment:
Q  385 tggaataattaaatacaagccaaaagtagaaaacaac 421  Q
    |||||||||||||||||||||||||||||||||||||    
T  38210706 tggaataattaaatacaagccaaaagtagaaaacaac 38210670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 50494334 - 50494298
Alignment:
Q  385 tggaataattaaatacaagccaaaagtagaaaacaac 421  Q
    |||||||||||||||||||||||||||||||||||||    
T  50494334 tggaataattaaatacaagccaaaagtagaaaacaac 50494298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 385 - 420
Target Start/End: Complemental strand, 11170705 - 11170670
Alignment:
Q  385 tggaataattaaatacaagccaaaagtagaaaacaa 420  Q
    ||||||||||||||||||||||||||||||||||||    
T  11170705 tggaataattaaatacaagccaaaagtagaaaacaa 11170670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 335 - 389
Target Start/End: Original strand, 6063278 - 6063332
Alignment:
Q  335 gtcactgttgcgaattcgtcggaaaatcacaccaataacaacttgatgtgtggaa 389  Q
    |||| |||||||||||||  | ||||||||||| |||||||||||||||||||||    
T  6063278 gtcattgttgcgaattcgatgaaaaatcacaccgataacaacttgatgtgtggaa 6063332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 340 - 392
Target Start/End: Complemental strand, 3859930 - 3859877
Alignment:
Q  340 tgttgcgaattcg-tcggaaaatcacaccaataacaacttgatgtgtggaataa 392  Q
    ||||| ||||||| ||| ||| ||||||||||||||||||||||||||||||||    
T  3859930 tgttgtgaattcgatcgaaaagtcacaccaataacaacttgatgtgtggaataa 3859877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 356 - 388
Target Start/End: Complemental strand, 456310 - 456278
Alignment:
Q  356 gaaaatcacaccaataacaacttgatgtgtgga 388  Q
    |||||||||||||||||||||||||||||||||    
T  456310 gaaaatcacaccaataacaacttgatgtgtgga 456278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 356 - 388
Target Start/End: Complemental strand, 458687 - 458655
Alignment:
Q  356 gaaaatcacaccaataacaacttgatgtgtgga 388  Q
    |||||||||||||||||||||||||||||||||    
T  458687 gaaaatcacaccaataacaacttgatgtgtgga 458655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 340 - 388
Target Start/End: Complemental strand, 747177 - 747129
Alignment:
Q  340 tgttgcgaattcgtcggaaaatcacaccaataacaacttgatgtgtgga 388  Q
    ||||| |||||||  | ||||||||||||||||||||||||||||||||    
T  747177 tgttgtgaattcgatgaaaaatcacaccaataacaacttgatgtgtgga 747129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 1321814 - 1321778
Alignment:
Q  385 tggaataattaaatacaagccaaaagtagaaaacaac 421  Q
    ||||| |||||||||||||||||||||||||||||||    
T  1321814 tggaacaattaaatacaagccaaaagtagaaaacaac 1321778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 356 - 388
Target Start/End: Complemental strand, 5192053 - 5192021
Alignment:
Q  356 gaaaatcacaccaataacaacttgatgtgtgga 388  Q
    |||||||||||||||||||||||||||||||||    
T  5192053 gaaaatcacaccaataacaacttgatgtgtgga 5192021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 356 - 388
Target Start/End: Original strand, 10084244 - 10084276
Alignment:
Q  356 gaaaatcacaccaataacaacttgatgtgtgga 388  Q
    |||||||||||||||||||||||||||||||||    
T  10084244 gaaaatcacaccaataacaacttgatgtgtgga 10084276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 356 - 388
Target Start/End: Original strand, 10191167 - 10191199
Alignment:
Q  356 gaaaatcacaccaataacaacttgatgtgtgga 388  Q
    |||||||||||||||||||||||||||||||||    
T  10191167 gaaaatcacaccaataacaacttgatgtgtgga 10191199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 340 - 388
Target Start/End: Original strand, 10621366 - 10621414
Alignment:
Q  340 tgttgcgaattcgtcggaaaatcacaccaataacaacttgatgtgtgga 388  Q
    ||||| |||||||  | ||||||||||||||||||||||||||||||||    
T  10621366 tgttgtgaattcgatgaaaaatcacaccaataacaacttgatgtgtgga 10621414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 356 - 388
Target Start/End: Original strand, 10955882 - 10955914
Alignment:
Q  356 gaaaatcacaccaataacaacttgatgtgtgga 388  Q
    |||||||||||||||||||||||||||||||||    
T  10955882 gaaaatcacaccaataacaacttgatgtgtgga 10955914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 10955949 - 10955985
Alignment:
Q  385 tggaataattaaatacaagccaaaagtagaaaacaac 421  Q
    ||||| |||||||||||||||||||||||||||||||    
T  10955949 tggaacaattaaatacaagccaaaagtagaaaacaac 10955985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 356 - 388
Target Start/End: Original strand, 10958178 - 10958210
Alignment:
Q  356 gaaaatcacaccaataacaacttgatgtgtgga 388  Q
    |||||||||||||||||||||||||||||||||    
T  10958178 gaaaatcacaccaataacaacttgatgtgtgga 10958210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 11168436 - 11168400
Alignment:
Q  385 tggaataattaaatacaagccaaaagtagaaaacaac 421  Q
    ||||| |||||||||||||||||||||||||||||||    
T  11168436 tggaacaattaaatacaagccaaaagtagaaaacaac 11168400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 356 - 388
Target Start/End: Complemental strand, 11168504 - 11168472
Alignment:
Q  356 gaaaatcacaccaataacaacttgatgtgtgga 388  Q
    |||||||||||||||||||||||||||||||||    
T  11168504 gaaaatcacaccaataacaacttgatgtgtgga 11168472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 25533760 - 25533724
Alignment:
Q  385 tggaataattaaatacaagccaaaagtagaaaacaac 421  Q
    ||||| |||||||||||||||||||||||||||||||    
T  25533760 tggaacaattaaatacaagccaaaagtagaaaacaac 25533724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 340 - 388
Target Start/End: Complemental strand, 38210789 - 38210741
Alignment:
Q  340 tgttgcgaattcgtcggaaaatcacaccaataacaacttgatgtgtgga 388  Q
    ||||| |||||||  | ||||||||||||||||||||||||||||||||    
T  38210789 tgttgtgaattcgatgaaaaatcacaccaataacaacttgatgtgtgga 38210741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 38890375 - 38890339
Alignment:
Q  385 tggaataattaaatacaagccaaaagtagaaaacaac 421  Q
    ||||| |||||||||||||||||||||||||||||||    
T  38890375 tggaacaattaaatacaagccaaaagtagaaaacaac 38890339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 356 - 388
Target Start/End: Complemental strand, 41849455 - 41849423
Alignment:
Q  356 gaaaatcacaccaataacaacttgatgtgtgga 388  Q
    |||||||||||||||||||||||||||||||||    
T  41849455 gaaaatcacaccaataacaacttgatgtgtgga 41849423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 340 - 388
Target Start/End: Complemental strand, 43226495 - 43226447
Alignment:
Q  340 tgttgcgaattcgtcggaaaatcacaccaataacaacttgatgtgtgga 388  Q
    |||||||||||||  |  |||||||||||||||||||||||||||||||    
T  43226495 tgttgcgaattcgatgagaaatcacaccaataacaacttgatgtgtgga 43226447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 340 - 388
Target Start/End: Complemental strand, 50494417 - 50494369
Alignment:
Q  340 tgttgcgaattcgtcggaaaatcacaccaataacaacttgatgtgtgga 388  Q
    ||||| |||||||  | ||||||||||||||||||||||||||||||||    
T  50494417 tgttgtgaattcgatgaaaaatcacaccaataacaacttgatgtgtgga 50494369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 51726929 - 51726965
Alignment:
Q  385 tggaataattaaatacaagccaaaagtagaaaacaac 421  Q
    ||||| |||||||||||||||||||||||||||||||    
T  51726929 tggaacaattaaatacaagccaaaagtagaaaacaac 51726965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 356 - 388
Target Start/End: Original strand, 53893909 - 53893941
Alignment:
Q  356 gaaaatcacaccaataacaacttgatgtgtgga 388  Q
    |||||||||||||||||||||||||||||||||    
T  53893909 gaaaatcacaccaataacaacttgatgtgtgga 53893941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 385 - 420
Target Start/End: Complemental strand, 5191986 - 5191951
Alignment:
Q  385 tggaataattaaatacaagccaaaagtagaaaacaa 420  Q
    ||||| ||||||||||||||||||||||||||||||    
T  5191986 tggaacaattaaatacaagccaaaagtagaaaacaa 5191951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 357 - 388
Target Start/End: Complemental strand, 5886599 - 5886568
Alignment:
Q  357 aaaatcacaccaataacaacttgatgtgtgga 388  Q
    ||||||||||||||||||||||||||||||||    
T  5886599 aaaatcacaccaataacaacttgatgtgtgga 5886568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 357 - 388
Target Start/End: Complemental strand, 5900072 - 5900041
Alignment:
Q  357 aaaatcacaccaataacaacttgatgtgtgga 388  Q
    ||||||||||||||||||||||||||||||||    
T  5900072 aaaatcacaccaataacaacttgatgtgtgga 5900041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 356 - 387
Target Start/End: Original strand, 51726862 - 51726893
Alignment:
Q  356 gaaaatcacaccaataacaacttgatgtgtgg 387  Q
    ||||||||||||||||||||||||||||||||    
T  51726862 gaaaatcacaccaataacaacttgatgtgtgg 51726893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 391 - 421
Target Start/End: Original strand, 10084317 - 10084347
Alignment:
Q  391 aattaaatacaagccaaaagtagaaaacaac 421  Q
    |||||||||||||||||||||||||||||||    
T  10084317 aattaaatacaagccaaaagtagaaaacaac 10084347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 391 - 421
Target Start/End: Original strand, 10191240 - 10191270
Alignment:
Q  391 aattaaatacaagccaaaagtagaaaacaac 421  Q
    |||||||||||||||||||||||||||||||    
T  10191240 aattaaatacaagccaaaagtagaaaacaac 10191270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 391 - 421
Target Start/End: Original strand, 10958251 - 10958281
Alignment:
Q  391 aattaaatacaagccaaaagtagaaaacaac 421  Q
    |||||||||||||||||||||||||||||||    
T  10958251 aattaaatacaagccaaaagtagaaaacaac 10958281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 358 - 388
Target Start/End: Complemental strand, 38890441 - 38890411
Alignment:
Q  358 aaatcacaccaataacaacttgatgtgtgga 388  Q
    |||||||||||||||||||||||||||||||    
T  38890441 aaatcacaccaataacaacttgatgtgtgga 38890411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 358 - 388
Target Start/End: Complemental strand, 43228687 - 43228657
Alignment:
Q  358 aaatcacaccaataacaacttgatgtgtgga 388  Q
    |||||||||||||||||||||||||||||||    
T  43228687 aaatcacaccaataacaacttgatgtgtgga 43228657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 388
Target Start/End: Original strand, 4308122 - 4308171
Alignment:
Q  340 tgttgcgaattcgtcggaaa-atcacaccaataacaacttgatgtgtgga 388  Q
    |||||||||||||  | ||| |||||||||||||||||||||||||||||    
T  4308122 tgttgcgaattcgatgaaaatatcacaccaataacaacttgatgtgtgga 4308171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 25389242 - 25389205
Alignment:
Q  385 tggaataattaaatacaagcc-aaaagtagaaaacaac 421  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  25389242 tggaataattaaatacaagccaaaaagtagaaaacaac 25389205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 388
Target Start/End: Original strand, 22114158 - 22114190
Alignment:
Q  356 gaaaatcacaccaataacaacttgatgtgtgga 388  Q
    |||||||||||||||| ||||||||||||||||    
T  22114158 gaaaatcacaccaatagcaacttgatgtgtgga 22114190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 388
Target Start/End: Original strand, 27101043 - 27101071
Alignment:
Q  360 atcacaccaataacaacttgatgtgtgga 388  Q
    |||||||||||||||||||||||||||||    
T  27101043 atcacaccaataacaacttgatgtgtgga 27101071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 388
Target Start/End: Original strand, 28412870 - 28412918
Alignment:
Q  340 tgttgcgaattcgtcggaaaatcacaccaataacaacttgatgtgtgga 388  Q
    ||||| |||||||  | |||| |||||||||||||||||||||||||||    
T  28412870 tgttgtgaattcgatgaaaaaacacaccaataacaacttgatgtgtgga 28412918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000002; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 340 - 388
Target Start/End: Original strand, 40836583 - 40836632
Alignment:
Q  340 tgttgcgaattcg-tcggaaaatcacaccaataacaacttgatgtgtgga 388  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  40836583 tgttgcgaattcgatcgaaaaatcacaccaataacaacttgatgtgtgga 40836632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 1606744 - 1606708
Alignment:
Q  385 tggaataattaaatacaagccaaaagtagaaaacaac 421  Q
    |||||||||||||||||||||||||||||||||||||    
T  1606744 tggaataattaaatacaagccaaaagtagaaaacaac 1606708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 340 - 388
Target Start/End: Original strand, 9027034 - 9027082
Alignment:
Q  340 tgttgcgaattcgtcggaaaatcacaccaataacaacttgatgtgtgga 388  Q
    |||||||||||||  | ||||||||||||||||||||||||||||||||    
T  9027034 tgttgcgaattcgatgaaaaatcacaccaataacaacttgatgtgtgga 9027082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 340 - 388
Target Start/End: Complemental strand, 11759575 - 11759527
Alignment:
Q  340 tgttgcgaattcgtcggaaaatcacaccaataacaacttgatgtgtgga 388  Q
    |||||||||||||  | ||||||||||||||||||||||||||||||||    
T  11759575 tgttgcgaattcgatgaaaaatcacaccaataacaacttgatgtgtgga 11759527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 340 - 388
Target Start/End: Complemental strand, 22137527 - 22137479
Alignment:
Q  340 tgttgcgaattcgtcggaaaatcacaccaataacaacttgatgtgtgga 388  Q
    ||||| ||||||| || ||||||||||||||||||||||||||||||||    
T  22137527 tgttgtgaattcgacgaaaaatcacaccaataacaacttgatgtgtgga 22137479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 340 - 388
Target Start/End: Original strand, 31153691 - 31153739
Alignment:
Q  340 tgttgcgaattcgtcggaaaatcacaccaataacaacttgatgtgtgga 388  Q
    |||||||||||||  | ||||||||||||||||||||||||||||||||    
T  31153691 tgttgcgaattcgatgaaaaatcacaccaataacaacttgatgtgtgga 31153739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 340 - 388
Target Start/End: Complemental strand, 40550277 - 40550229
Alignment:
Q  340 tgttgcgaattcgtcggaaaatcacaccaataacaacttgatgtgtgga 388  Q
    ||||| ||||||| || ||||||||||||||||||||||||||||||||    
T  40550277 tgttgtgaattcgacgaaaaatcacaccaataacaacttgatgtgtgga 40550229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 340 - 388
Target Start/End: Complemental strand, 40552554 - 40552506
Alignment:
Q  340 tgttgcgaattcgtcggaaaatcacaccaataacaacttgatgtgtgga 388  Q
    ||||| ||||||| || ||||||||||||||||||||||||||||||||    
T  40552554 tgttgtgaattcgacgaaaaatcacaccaataacaacttgatgtgtgga 40552506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 341 - 388
Target Start/End: Complemental strand, 28488000 - 28487953
Alignment:
Q  341 gttgcgaattcgtcggaaaatcacaccaataacaacttgatgtgtgga 388  Q
    ||||||||||||  | ||||||||||||||||||||||||||||||||    
T  28488000 gttgcgaattcgatgaaaaatcacaccaataacaacttgatgtgtgga 28487953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 338 - 388
Target Start/End: Complemental strand, 45014 - 44964
Alignment:
Q  338 actgttgcgaattcgtcggaaaatcacaccaataacaacttgatgtgtgga 388  Q
    |||||||||||||||  |  |||||||||||||||||||||||||||||||    
T  45014 actgttgcgaattcgatgagaaatcacaccaataacaacttgatgtgtgga 44964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 380 - 421
Target Start/End: Complemental strand, 25542898 - 25542857
Alignment:
Q  380 atgtgtggaataattaaatacaagccaaaagtagaaaacaac 421  Q
    |||| ||||| |||||||||||||||||||||||||||||||    
T  25542898 atgtatggaacaattaaatacaagccaaaagtagaaaacaac 25542857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 380 - 421
Target Start/End: Complemental strand, 28485935 - 28485894
Alignment:
Q  380 atgtgtggaataattaaatacaagccaaaagtagaaaacaac 421  Q
    |||| ||||| |||||||||||||||||||||||||||||||    
T  28485935 atgtatggaacaattaaatacaagccaaaagtagaaaacaac 28485894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 356 - 388
Target Start/End: Original strand, 1502831 - 1502863
Alignment:
Q  356 gaaaatcacaccaataacaacttgatgtgtgga 388  Q
    |||||||||||||||||||||||||||||||||    
T  1502831 gaaaatcacaccaataacaacttgatgtgtgga 1502863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 340 - 388
Target Start/End: Complemental strand, 1606827 - 1606779
Alignment:
Q  340 tgttgcgaattcgtcggaaaatcacaccaataacaacttgatgtgtgga 388  Q
    ||||| |||||||  | ||||||||||||||||||||||||||||||||    
T  1606827 tgttgtgaattcgatgaaaaatcacaccaataacaacttgatgtgtgga 1606779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 3036089 - 3036053
Alignment:
Q  385 tggaataattaaatacaagccaaaagtagaaaacaac 421  Q
    ||||| |||||||||||||||||||||||||||||||    
T  3036089 tggaacaattaaatacaagccaaaagtagaaaacaac 3036053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 381 - 421
Target Start/End: Original strand, 7094380 - 7094420
Alignment:
Q  381 tgtgtggaataattaaatacaagccaaaagtagaaaacaac 421  Q
    ||||||||| ||||||||||||| |||||||||||||||||    
T  7094380 tgtgtggaacaattaaatacaagtcaaaagtagaaaacaac 7094420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 340 - 388
Target Start/End: Original strand, 7469864 - 7469912
Alignment:
Q  340 tgttgcgaattcgtcggaaaatcacaccaataacaacttgatgtgtgga 388  Q
    |||||||||||||  | ||||||||||||||||||| ||||||||||||    
T  7469864 tgttgcgaattcgatgaaaaatcacaccaataacaatttgatgtgtgga 7469912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 7469946 - 7469982
Alignment:
Q  385 tggaataattaaatacaagccaaaagtagaaaacaac 421  Q
    ||||| |||||||||||||||||||||||||||||||    
T  7469946 tggaacaattaaatacaagccaaaagtagaaaacaac 7469982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 340 - 388
Target Start/End: Original strand, 7471821 - 7471869
Alignment:
Q  340 tgttgcgaattcgtcggaaaatcacaccaataacaacttgatgtgtgga 388  Q
    ||||||||||||   | ||||||||||||||||||||||||||||||||    
T  7471821 tgttgcgaattcaatgaaaaatcacaccaataacaacttgatgtgtgga 7471869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 7471904 - 7471940
Alignment:
Q  385 tggaataattaaatacaagccaaaagtagaaaacaac 421  Q
    ||||| |||||||||||||||||||||||||||||||    
T  7471904 tggaacaattaaatacaagccaaaagtagaaaacaac 7471940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 11759492 - 11759456
Alignment:
Q  385 tggaataattaaatacaagccaaaagtagaaaacaac 421  Q
    ||||| |||||||||||||||||||||||||||||||    
T  11759492 tggaacaattaaatacaagccaaaagtagaaaacaac 11759456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 18345906 - 18345870
Alignment:
Q  385 tggaataattaaatacaagccaaaagtagaaaacaac 421  Q
    ||||| |||||||||||||||||||||||||||||||    
T  18345906 tggaacaattaaatacaagccaaaagtagaaaacaac 18345870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 20297727 - 20297691
Alignment:
Q  385 tggaataattaaatacaagccaaaagtagaaaacaac 421  Q
    ||||| |||||||||||||||||||||||||||||||    
T  20297727 tggaacaattaaatacaagccaaaagtagaaaacaac 20297691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 340 - 388
Target Start/End: Complemental strand, 20297810 - 20297762
Alignment:
Q  340 tgttgcgaattcgtcggaaaatcacaccaataacaacttgatgtgtgga 388  Q
    ||||| |||||||  | ||||||||||||||||||||||||||||||||    
T  20297810 tgttgtgaattcgatgaaaaatcacaccaataacaacttgatgtgtgga 20297762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 20299825 - 20299789
Alignment:
Q  385 tggaataattaaatacaagccaaaagtagaaaacaac 421  Q
    ||||| |||||||||||||||||||||||||||||||    
T  20299825 tggaacaattaaatacaagccaaaagtagaaaacaac 20299789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 340 - 388
Target Start/End: Complemental strand, 20626481 - 20626433
Alignment:
Q  340 tgttgcgaattcgtcggaaaatcacaccaataacaacttgatgtgtgga 388  Q
    |||||||||||||  | |||||||||||||||||||| |||||||||||    
T  20626481 tgttgcgaattcgatgaaaaatcacaccaataacaacctgatgtgtgga 20626433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 340 - 388
Target Start/End: Complemental strand, 20630372 - 20630324
Alignment:
Q  340 tgttgcgaattcgtcggaaaatcacaccaataacaacttgatgtgtgga 388  Q
    |||||||||||||  | |||||||||||||||||||| |||||||||||    
T  20630372 tgttgcgaattcgatgaaaaatcacaccaataacaacctgatgtgtgga 20630324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 340 - 388
Target Start/End: Complemental strand, 20642791 - 20642743
Alignment:
Q  340 tgttgcgaattcgtcggaaaatcacaccaataacaacttgatgtgtgga 388  Q
    |||||||||||||  | |||||||||||||||||||| |||||||||||    
T  20642791 tgttgcgaattcgatgaaaaatcacaccaataacaacctgatgtgtgga 20642743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 340 - 388
Target Start/End: Complemental strand, 25542976 - 25542928
Alignment:
Q  340 tgttgcgaattcgtcggaaaatcacaccaataacaacttgatgtgtgga 388  Q
    ||||| |||||||  | ||||||||||||||||||||||||||||||||    
T  25542976 tgttgtgaattcgatgaaaaatcacaccaataacaacttgatgtgtgga 25542928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 38394351 - 38394315
Alignment:
Q  385 tggaataattaaatacaagccaaaagtagaaaacaac 421  Q
    ||||| |||||||||||||||||||||||||||||||    
T  38394351 tggaacaattaaatacaagccaaaagtagaaaacaac 38394315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 340 - 388
Target Start/End: Complemental strand, 38394434 - 38394386
Alignment:
Q  340 tgttgcgaattcgtcggaaaatcacaccaataacaacttgatgtgtgga 388  Q
    ||||| |||||||  | ||||||||||||||||||||||||||||||||    
T  38394434 tgttgtgaattcgatgaaaaatcacaccaataacaacttgatgtgtgga 38394386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 356 - 388
Target Start/End: Complemental strand, 38397071 - 38397039
Alignment:
Q  356 gaaaatcacaccaataacaacttgatgtgtgga 388  Q
    |||||||||||||||||||||||||||||||||    
T  38397071 gaaaatcacaccaataacaacttgatgtgtgga 38397039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 40836667 - 40836703
Alignment:
Q  385 tggaataattaaatacaagccaaaagtagaaaacaac 421  Q
    ||||| |||||||||||||||||||||||||||||||    
T  40836667 tggaacaattaaatacaagccaaaagtagaaaacaac 40836703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 356 - 388
Target Start/End: Complemental strand, 48458085 - 48458053
Alignment:
Q  356 gaaaatcacaccaataacaacttgatgtgtgga 388  Q
    |||||||||||||||||||||||||||||||||    
T  48458085 gaaaatcacaccaataacaacttgatgtgtgga 48458053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 357 - 388
Target Start/End: Original strand, 1046775 - 1046806
Alignment:
Q  357 aaaatcacaccaataacaacttgatgtgtgga 388  Q
    ||||||||||||||||||||||||||||||||    
T  1046775 aaaatcacaccaataacaacttgatgtgtgga 1046806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 357 - 388
Target Start/End: Original strand, 7349135 - 7349166
Alignment:
Q  357 aaaatcacaccaataacaacttgatgtgtgga 388  Q
    ||||||||||||||||||||||||||||||||    
T  7349135 aaaatcacaccaataacaacttgatgtgtgga 7349166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 357 - 388
Target Start/End: Original strand, 7351509 - 7351540
Alignment:
Q  357 aaaatcacaccaataacaacttgatgtgtgga 388  Q
    ||||||||||||||||||||||||||||||||    
T  7351509 aaaatcacaccaataacaacttgatgtgtgga 7351540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 357 - 388
Target Start/End: Complemental strand, 20299891 - 20299860
Alignment:
Q  357 aaaatcacaccaataacaacttgatgtgtgga 388  Q
    ||||||||||||||||||||||||||||||||    
T  20299891 aaaatcacaccaataacaacttgatgtgtgga 20299860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 357 - 388
Target Start/End: Complemental strand, 25276549 - 25276518
Alignment:
Q  357 aaaatcacaccaataacaacttgatgtgtgga 388  Q
    ||||||||||||||||||||||||||||||||    
T  25276549 aaaatcacaccaataacaacttgatgtgtgga 25276518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 358 - 388
Target Start/End: Complemental strand, 36059 - 36029
Alignment:
Q  358 aaatcacaccaataacaacttgatgtgtgga 388  Q
    |||||||||||||||||||||||||||||||    
T  36059 aaatcacaccaataacaacttgatgtgtgga 36029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 391 - 421
Target Start/End: Complemental strand, 1850340 - 1850310
Alignment:
Q  391 aattaaatacaagccaaaagtagaaaacaac 421  Q
    |||||||||||||||||||||||||||||||    
T  1850340 aattaaatacaagccaaaagtagaaaacaac 1850310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 358 - 388
Target Start/End: Complemental strand, 1850411 - 1850381
Alignment:
Q  358 aaatcacaccaataacaacttgatgtgtgga 388  Q
    |||||||||||||||||||||||||||||||    
T  1850411 aaatcacaccaataacaacttgatgtgtgga 1850381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 356 - 386
Target Start/End: Complemental strand, 2935701 - 2935671
Alignment:
Q  356 gaaaatcacaccaataacaacttgatgtgtg 386  Q
    |||||||||||||||||||||||||||||||    
T  2935701 gaaaatcacaccaataacaacttgatgtgtg 2935671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 388
Target Start/End: Original strand, 1049129 - 1049178
Alignment:
Q  340 tgttgcgaattcgtcggaaaat-cacaccaataacaacttgatgtgtgga 388  Q
    |||||||||||||  | ||||| |||||||||||||||||||||||||||    
T  1049129 tgttgcgaattcgaagaaaaattcacaccaataacaacttgatgtgtgga 1049178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 388
Target Start/End: Original strand, 43253357 - 43253405
Alignment:
Q  339 ctgttgcgaattcgtcggaaaatcacaccaataacaacttgatgtgtgga 388  Q
    ||||||||||||||  | ||||||||||||||||||| ||||||||||||    
T  43253357 ctgttgcgaattcgatg-aaaatcacaccaataacaatttgatgtgtgga 43253405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 44929 - 44893
Alignment:
Q  385 tggaataattaaatacaagccaaaagtagaaaacaac 421  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  44929 tggaacaattaaatacaagcaaaaagtagaaaacaac 44893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 388
Target Start/End: Complemental strand, 28486013 - 28485965
Alignment:
Q  340 tgttgcgaattcgtcggaaaatcacaccaataacaacttgatgtgtgga 388  Q
    ||||| |||||||  | ||||||||||||||||||||||||| ||||||    
T  28486013 tgttgtgaattcgatgaaaaatcacaccaataacaacttgatatgtgga 28485965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 28487918 - 28487882
Alignment:
Q  385 tggaataattaaatacaagccaaaagtagaaaacaac 421  Q
    ||||| ||||||||||||| |||||||||||||||||    
T  28487918 tggaacaattaaatacaagtcaaaagtagaaaacaac 28487882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 48458018 - 48457982
Alignment:
Q  385 tggaataattaaatacaagccaaaagtagaaaacaac 421  Q
    ||||| ||||||||||||| |||||||||||||||||    
T  48458018 tggaacaattaaatacaagtcaaaagtagaaaacaac 48457982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 340 - 388
Target Start/End: Complemental strand, 22564 - 22516
Alignment:
Q  340 tgttgcgaattcgtcggaaaatcacaccaataacaacttgatgtgtgga 388  Q
    ||||| ||||||| || ||||||||||||||||||||||||||||||||    
T  22564 tgttgtgaattcgacgaaaaatcacaccaataacaacttgatgtgtgga 22516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 340 - 388
Target Start/End: Complemental strand, 24839 - 24791
Alignment:
Q  340 tgttgcgaattcgtcggaaaatcacaccaataacaacttgatgtgtgga 388  Q
    ||||| ||||||| || ||||||||||||||||||||||||||||||||    
T  24839 tgttgtgaattcgacgaaaaatcacaccaataacaacttgatgtgtgga 24791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.00000000001; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 340 - 388
Target Start/End: Complemental strand, 30967673 - 30967626
Alignment:
Q  340 tgttgcgaattcgtcggaaaatcacaccaataacaacttgatgtgtgga 388  Q
    |||||||||||||| | ||||||||||||||||||||||||||||||||    
T  30967673 tgttgcgaattcgttg-aaaatcacaccaataacaacttgatgtgtgga 30967626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 339 - 388
Target Start/End: Original strand, 29754548 - 29754597
Alignment:
Q  339 ctgttgcgaattcgtcggaaaatcacaccaataacaacttgatgtgtgga 388  Q
    |||||| |||||||  | ||||||||||||||||||||||||||||||||    
T  29754548 ctgttgtgaattcgatgaaaaatcacaccaataacaacttgatgtgtgga 29754597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 356 - 388
Target Start/End: Original strand, 2628742 - 2628774
Alignment:
Q  356 gaaaatcacaccaataacaacttgatgtgtgga 388  Q
    |||||||||||||||||||||||||||||||||    
T  2628742 gaaaatcacaccaataacaacttgatgtgtgga 2628774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 340 - 388
Target Start/End: Original strand, 8717195 - 8717243
Alignment:
Q  340 tgttgcgaattcgtcggaaaatcacaccaataacaacttgatgtgtgga 388  Q
    ||||| |||||||  | ||||||||||||||||||||||||||||||||    
T  8717195 tgttgtgaattcgatgaaaaatcacaccaataacaacttgatgtgtgga 8717243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 340 - 388
Target Start/End: Original strand, 11982872 - 11982920
Alignment:
Q  340 tgttgcgaattcgtcggaaaatcacaccaataacaacttgatgtgtgga 388  Q
    ||||| |||||||  | ||||||||||||||||||||||||||||||||    
T  11982872 tgttgtgaattcgatgaaaaatcacaccaataacaacttgatgtgtgga 11982920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 340 - 388
Target Start/End: Original strand, 12195354 - 12195402
Alignment:
Q  340 tgttgcgaattcgtcggaaaatcacaccaataacaacttgatgtgtgga 388  Q
    ||||| |||||||  | ||||||||||||||||||||||||||||||||    
T  12195354 tgttgtgaattcgatgaaaaatcacaccaataacaacttgatgtgtgga 12195402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 14458691 - 14458727
Alignment:
Q  385 tggaataattaaatacaagccaaaagtagaaaacaac 421  Q
    ||||| |||||||||||||||||||||||||||||||    
T  14458691 tggaacaattaaatacaagccaaaagtagaaaacaac 14458727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 14507100 - 14507136
Alignment:
Q  385 tggaataattaaatacaagccaaaagtagaaaacaac 421  Q
    ||||| |||||||||||||||||||||||||||||||    
T  14507100 tggaacaattaaatacaagccaaaagtagaaaacaac 14507136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 340 - 388
Target Start/End: Complemental strand, 18322566 - 18322518
Alignment:
Q  340 tgttgcgaattcgtcggaaaatcacaccaataacaacttgatgtgtgga 388  Q
    ||||||||||||   | ||||||||||||||||||||||||||||||||    
T  18322566 tgttgcgaattctatgaaaaatcacaccaataacaacttgatgtgtgga 18322518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 340 - 388
Target Start/End: Original strand, 26065961 - 26066009
Alignment:
Q  340 tgttgcgaattcgtcggaaaatcacaccaataacaacttgatgtgtgga 388  Q
    ||||| |||||||  | ||||||||||||||||||||||||||||||||    
T  26065961 tgttgtgaattcgatgaaaaatcacaccaataacaacttgatgtgtgga 26066009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 340 - 388
Target Start/End: Original strand, 26068235 - 26068283
Alignment:
Q  340 tgttgcgaattcgtcggaaaatcacaccaataacaacttgatgtgtgga 388  Q
    ||||| |||||||  | ||||||||||||||||||||||||||||||||    
T  26068235 tgttgtgaattcgatgaaaaatcacaccaataacaacttgatgtgtgga 26068283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 356 - 388
Target Start/End: Original strand, 28241178 - 28241210
Alignment:
Q  356 gaaaatcacaccaataacaacttgatgtgtgga 388  Q
    |||||||||||||||||||||||||||||||||    
T  28241178 gaaaatcacaccaataacaacttgatgtgtgga 28241210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 28241245 - 28241281
Alignment:
Q  385 tggaataattaaatacaagccaaaagtagaaaacaac 421  Q
    ||||| |||||||||||||||||||||||||||||||    
T  28241245 tggaacaattaaatacaagccaaaagtagaaaacaac 28241281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 30967591 - 30967555
Alignment:
Q  385 tggaataattaaatacaagccaaaagtagaaaacaac 421  Q
    ||||||||||||||||||| |||||||||||||||||    
T  30967591 tggaataattaaatacaagtcaaaagtagaaaacaac 30967555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 33309246 - 33309210
Alignment:
Q  385 tggaataattaaatacaagccaaaagtagaaaacaac 421  Q
    ||||| |||||||||||||||||||||||||||||||    
T  33309246 tggaacaattaaatacaagccaaaagtagaaaacaac 33309210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 356 - 388
Target Start/End: Complemental strand, 33309314 - 33309282
Alignment:
Q  356 gaaaatcacaccaataacaacttgatgtgtgga 388  Q
    |||||||||||||||||||||||||||||||||    
T  33309314 gaaaatcacaccaataacaacttgatgtgtgga 33309282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 33311515 - 33311479
Alignment:
Q  385 tggaataattaaatacaagccaaaagtagaaaacaac 421  Q
    ||||| |||||||||||||||||||||||||||||||    
T  33311515 tggaacaattaaatacaagccaaaagtagaaaacaac 33311479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 356 - 388
Target Start/End: Complemental strand, 33311583 - 33311551
Alignment:
Q  356 gaaaatcacaccaataacaacttgatgtgtgga 388  Q
    |||||||||||||||||||||||||||||||||    
T  33311583 gaaaatcacaccaataacaacttgatgtgtgga 33311551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 357 - 388
Target Start/End: Original strand, 1230106 - 1230137
Alignment:
Q  357 aaaatcacaccaataacaacttgatgtgtgga 388  Q
    ||||||||||||||||||||||||||||||||    
T  1230106 aaaatcacaccaataacaacttgatgtgtgga 1230137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 357 - 388
Target Start/End: Original strand, 4816088 - 4816119
Alignment:
Q  357 aaaatcacaccaataacaacttgatgtgtgga 388  Q
    ||||||||||||||||||||||||||||||||    
T  4816088 aaaatcacaccaataacaacttgatgtgtgga 4816119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 357 - 388
Target Start/End: Original strand, 5273073 - 5273104
Alignment:
Q  357 aaaatcacaccaataacaacttgatgtgtgga 388  Q
    ||||||||||||||||||||||||||||||||    
T  5273073 aaaatcacaccaataacaacttgatgtgtgga 5273104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 357 - 388
Target Start/End: Complemental strand, 26065438 - 26065407
Alignment:
Q  357 aaaatcacaccaataacaacttgatgtgtgga 388  Q
    ||||||||||||||||||||||||||||||||    
T  26065438 aaaatcacaccaataacaacttgatgtgtgga 26065407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 357 - 388
Target Start/End: Complemental strand, 26085407 - 26085376
Alignment:
Q  357 aaaatcacaccaataacaacttgatgtgtgga 388  Q
    ||||||||||||||||||||||||||||||||    
T  26085407 aaaatcacaccaataacaacttgatgtgtgga 26085376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 357 - 388
Target Start/End: Original strand, 26932420 - 26932451
Alignment:
Q  357 aaaatcacaccaataacaacttgatgtgtgga 388  Q
    ||||||||||||||||||||||||||||||||    
T  26932420 aaaatcacaccaataacaacttgatgtgtgga 26932451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 358 - 388
Target Start/End: Original strand, 19704422 - 19704452
Alignment:
Q  358 aaatcacaccaataacaacttgatgtgtgga 388  Q
    |||||||||||||||||||||||||||||||    
T  19704422 aaatcacaccaataacaacttgatgtgtgga 19704452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 388
Target Start/End: Complemental strand, 9020398 - 9020349
Alignment:
Q  340 tgttgcgaattcgtcggaaaatcacaccaataac-aacttgatgtgtgga 388  Q
    |||||||||||||  | ||||||||||||||||| |||||||||||||||    
T  9020398 tgttgcgaattcgatgaaaaatcacaccaataacaaacttgatgtgtgga 9020349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 388
Target Start/End: Complemental strand, 13057659 - 13057610
Alignment:
Q  340 tgttgcgaattcgtcggaaaatcacaccaataac-aacttgatgtgtgga 388  Q
    |||||||||||||  | ||||||||||||||||| |||||||||||||||    
T  13057659 tgttgcgaattcgatgaaaaatcacaccaataacaaacttgatgtgtgga 13057610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 393
Target Start/End: Original strand, 14458607 - 14458660
Alignment:
Q  340 tgttgcgaattcgtcggaaaatcacaccaataacaacttgatgtgtggaataat 393  Q
    |||||||||||||  | |||||||||||||||| | ||||||||||||| ||||    
T  14458607 tgttgcgaattcgatgaaaaatcacaccaataatagcttgatgtgtggagtaat 14458660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 388 - 417
Target Start/End: Original strand, 20915283 - 20915312
Alignment:
Q  388 aataattaaatacaagccaaaagtagaaaa 417  Q
    ||||||||||||||||||||||||||||||    
T  20915283 aataattaaatacaagccaaaagtagaaaa 20915312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 388
Target Start/End: Original strand, 26887077 - 26887126
Alignment:
Q  340 tgttgcgaattcgtcg-gaaaatcacaccaataacaacttgatgtgtgga 388  Q
    ||||| |||||||||| ||||| ||||||||||| |||||||||||||||    
T  26887077 tgttgtgaattcgtcgagaaaaccacaccaataaaaacttgatgtgtgga 26887126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 344 - 388
Target Start/End: Original strand, 30728673 - 30728718
Alignment:
Q  344 gcgaattcgtcggaaaatcacaccaataac-aacttgatgtgtgga 388  Q
    |||||||||| | ||||||||||||||||| |||||||||||||||    
T  30728673 gcgaattcgttgaaaaatcacaccaataacaaacttgatgtgtgga 30728718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 393 - 421
Target Start/End: Original strand, 5273148 - 5273176
Alignment:
Q  393 ttaaatacaagccaaaagtagaaaacaac 421  Q
    |||||||||||||||||||||||||||||    
T  5273148 ttaaatacaagccaaaagtagaaaacaac 5273176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 388
Target Start/End: Original strand, 14507037 - 14507065
Alignment:
Q  360 atcacaccaataacaacttgatgtgtgga 388  Q
    |||||||||||||||||||||||||||||    
T  14507037 atcacaccaataacaacttgatgtgtgga 14507065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 417
Target Start/End: Original strand, 19704489 - 19704521
Alignment:
Q  385 tggaataattaaatacaagccaaaagtagaaaa 417  Q
    ||||| |||||||||||||||||||||||||||    
T  19704489 tggaacaattaaatacaagccaaaagtagaaaa 19704521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 388
Target Start/End: Original strand, 30034462 - 30034494
Alignment:
Q  356 gaaaatcacaccaataacaacttgatgtgtgga 388  Q
    |||||||||||||||||||||||||||| ||||    
T  30034462 gaaaatcacaccaataacaacttgatgtatgga 30034494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.00000000001; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 340 - 388
Target Start/End: Complemental strand, 23816323 - 23816275
Alignment:
Q  340 tgttgcgaattcgtcggaaaatcacaccaataacaacttgatgtgtgga 388  Q
    |||||||||||||  | ||||||||||||||||||||||||||||||||    
T  23816323 tgttgcgaattcgatgaaaaatcacaccaataacaacttgatgtgtgga 23816275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 47177717 - 47177681
Alignment:
Q  385 tggaataattaaatacaagccaaaagtagaaaacaac 421  Q
    |||||||||||||||||||||||||||||||||||||    
T  47177717 tggaataattaaatacaagccaaaagtagaaaacaac 47177681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 47180068 - 47180032
Alignment:
Q  385 tggaataattaaatacaagccaaaagtagaaaacaac 421  Q
    |||||||||||||||||||||||||||||||||||||    
T  47180068 tggaataattaaatacaagccaaaagtagaaaacaac 47180032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 340 - 388
Target Start/End: Complemental strand, 47906704 - 47906656
Alignment:
Q  340 tgttgcgaattcgtcggaaaatcacaccaataacaacttgatgtgtgga 388  Q
    |||||||||||||  | ||||||||||||||||||||||||||||||||    
T  47906704 tgttgcgaattcgatgaaaaatcacaccaataacaacttgatgtgtgga 47906656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 339 - 388
Target Start/End: Original strand, 9459276 - 9459325
Alignment:
Q  339 ctgttgcgaattcgtcggaaaatcacaccaataacaacttgatgtgtgga 388  Q
    |||||| |||||||  | ||||||||||||||||||||||||||||||||    
T  9459276 ctgttgtgaattcgatgaaaaatcacaccaataacaacttgatgtgtgga 9459325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 339 - 388
Target Start/End: Original strand, 9463103 - 9463152
Alignment:
Q  339 ctgttgcgaattcgtcggaaaatcacaccaataacaacttgatgtgtgga 388  Q
    |||||| |||||||  | ||||||||||||||||||||||||||||||||    
T  9463103 ctgttgtgaattcgatgaaaaatcacaccaataacaacttgatgtgtgga 9463152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 340 - 388
Target Start/End: Complemental strand, 13762275 - 13762226
Alignment:
Q  340 tgttgcgaattcgtcg-gaaaatcacaccaataacaacttgatgtgtgga 388  Q
    |||||||||||||  | |||||||||||||||||||||||||||||||||    
T  13762275 tgttgcgaattcgatgagaaaatcacaccaataacaacttgatgtgtgga 13762226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 339 - 388
Target Start/End: Complemental strand, 16232003 - 16231954
Alignment:
Q  339 ctgttgcgaattcgtcggaaaatcacaccaataacaacttgatgtgtgga 388  Q
    |||||| |||||||  | ||||||||||||||||||||||||||||||||    
T  16232003 ctgttgtgaattcgatgaaaaatcacaccaataacaacttgatgtgtgga 16231954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 2617872 - 2617836
Alignment:
Q  385 tggaataattaaatacaagccaaaagtagaaaacaac 421  Q
    ||||| |||||||||||||||||||||||||||||||    
T  2617872 tggaacaattaaatacaagccaaaagtagaaaacaac 2617836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 10399754 - 10399790
Alignment:
Q  385 tggaataattaaatacaagccaaaagtagaaaacaac 421  Q
    ||||| |||||||||||||||||||||||||||||||    
T  10399754 tggaacaattaaatacaagccaaaagtagaaaacaac 10399790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 356 - 388
Target Start/End: Complemental strand, 13358996 - 13358964
Alignment:
Q  356 gaaaatcacaccaataacaacttgatgtgtgga 388  Q
    |||||||||||||||||||||||||||||||||    
T  13358996 gaaaatcacaccaataacaacttgatgtgtgga 13358964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 356 - 388
Target Start/End: Original strand, 13447132 - 13447164
Alignment:
Q  356 gaaaatcacaccaataacaacttgatgtgtgga 388  Q
    |||||||||||||||||||||||||||||||||    
T  13447132 gaaaatcacaccaataacaacttgatgtgtgga 13447164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 13447199 - 13447235
Alignment:
Q  385 tggaataattaaatacaagccaaaagtagaaaacaac 421  Q
    ||||| |||||||||||||||||||||||||||||||    
T  13447199 tggaacaattaaatacaagccaaaagtagaaaacaac 13447235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 13762191 - 13762155
Alignment:
Q  385 tggaataattaaatacaagccaaaagtagaaaacaac 421  Q
    ||||| |||||||||||||||||||||||||||||||    
T  13762191 tggaacaattaaatacaagccaaaagtagaaaacaac 13762155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 356 - 388
Target Start/End: Original strand, 15294693 - 15294725
Alignment:
Q  356 gaaaatcacaccaataacaacttgatgtgtgga 388  Q
    |||||||||||||||||||||||||||||||||    
T  15294693 gaaaatcacaccaataacaacttgatgtgtgga 15294725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 15294760 - 15294796
Alignment:
Q  385 tggaataattaaatacaagccaaaagtagaaaacaac 421  Q
    ||||| |||||||||||||||||||||||||||||||    
T  15294760 tggaacaattaaatacaagccaaaagtagaaaacaac 15294796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 340 - 388
Target Start/End: Complemental strand, 16226607 - 16226559
Alignment:
Q  340 tgttgcgaattcgtcggaaaatcacaccaataacaacttgatgtgtgga 388  Q
    ||||| |||||||  | ||||||||||||||||||||||||||||||||    
T  16226607 tgttgtgaattcgatgaaaaatcacaccaataacaacttgatgtgtgga 16226559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 20291811 - 20291775
Alignment:
Q  385 tggaataattaaatacaagccaaaagtagaaaacaac 421  Q
    ||||| |||||||||||||||||||||||||||||||    
T  20291811 tggaacaattaaatacaagccaaaagtagaaaacaac 20291775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 356 - 388
Target Start/End: Complemental strand, 20291879 - 20291847
Alignment:
Q  356 gaaaatcacaccaataacaacttgatgtgtgga 388  Q
    |||||||||||||||||||||||||||||||||    
T  20291879 gaaaatcacaccaataacaacttgatgtgtgga 20291847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 20302796 - 20302760
Alignment:
Q  385 tggaataattaaatacaagccaaaagtagaaaacaac 421  Q
    ||||| |||||||||||||||||||||||||||||||    
T  20302796 tggaacaattaaatacaagccaaaagtagaaaacaac 20302760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 340 - 388
Target Start/End: Complemental strand, 23786278 - 23786230
Alignment:
Q  340 tgttgcgaattcgtcggaaaatcacaccaataacaacttgatgtgtgga 388  Q
    ||||| |||||||  | ||||||||||||||||||||||||||||||||    
T  23786278 tgttgtgaattcgatgaaaaatcacaccaataacaacttgatgtgtgga 23786230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 340 - 388
Target Start/End: Complemental strand, 24326101 - 24326053
Alignment:
Q  340 tgttgcgaattcgtcggaaaatcacaccaataacaacttgatgtgtgga 388  Q
    ||||| |||||||  | ||||||||||||||||||||||||||||||||    
T  24326101 tgttgtgaattcgatgaaaaatcacaccaataacaacttgatgtgtgga 24326053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 340 - 388
Target Start/End: Original strand, 46431548 - 46431596
Alignment:
Q  340 tgttgcgaattcgtcggaaaatcacaccaataacaacttgatgtgtgga 388  Q
    |||||||||||||  | ||||||||||||||||||||||||||| ||||    
T  46431548 tgttgcgaattcgatgaaaaatcacaccaataacaacttgatgtttgga 46431596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 46431631 - 46431667
Alignment:
Q  385 tggaataattaaatacaagccaaaagtagaaaacaac 421  Q
    ||||| |||||||||||||||||||||||||||||||    
T  46431631 tggaacaattaaatacaagccaaaagtagaaaacaac 46431667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 51750394 - 51750358
Alignment:
Q  385 tggaataattaaatacaagccaaaagtagaaaacaac 421  Q
    ||||| |||||||||||||||||||||||||||||||    
T  51750394 tggaacaattaaatacaagccaaaagtagaaaacaac 51750358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 357 - 388
Target Start/End: Complemental strand, 47177784 - 47177753
Alignment:
Q  357 aaaatcacaccaataacaacttgatgtgtgga 388  Q
    ||||||||||||||||||||||||||||||||    
T  47177784 aaaatcacaccaataacaacttgatgtgtgga 47177753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 357 - 388
Target Start/End: Complemental strand, 47180135 - 47180104
Alignment:
Q  357 aaaatcacaccaataacaacttgatgtgtgga 388  Q
    ||||||||||||||||||||||||||||||||    
T  47180135 aaaatcacaccaataacaacttgatgtgtgga 47180104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 357 - 388
Target Start/End: Complemental strand, 51750460 - 51750429
Alignment:
Q  357 aaaatcacaccaataacaacttgatgtgtgga 388  Q
    ||||||||||||||||||||||||||||||||    
T  51750460 aaaatcacaccaataacaacttgatgtgtgga 51750429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 386
Target Start/End: Original strand, 2510182 - 2510231
Alignment:
Q  338 actgttgcgaattcgtcg-gaaaatcacaccaataacaacttgatgtgtg 386  Q
    ||||||| |||||||| | |||||||||||||||||||||||||| ||||    
T  2510182 actgttgtgaattcgttgtgaaaatcacaccaataacaacttgatatgtg 2510231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 388
Target Start/End: Original strand, 6995540 - 6995589
Alignment:
Q  340 tgttgcgaattcgtcggaaaatcacaccaataac-aacttgatgtgtgga 388  Q
    |||||||||||||  | ||||||||||||||||| |||||||||||||||    
T  6995540 tgttgcgaattcgatgaaaaatcacaccaataacaaacttgatgtgtgga 6995589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 388
Target Start/End: Original strand, 10399669 - 10399718
Alignment:
Q  340 tgttgcgaattcgtcggaaa-atcacaccaataacaacttgatgtgtgga 388  Q
    |||||||||||||  | ||| |||||||||||||||||||||||||||||    
T  10399669 tgttgcgaattcgatgaaaatatcacaccaataacaacttgatgtgtgga 10399718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 388
Target Start/End: Complemental strand, 18840022 - 18839973
Alignment:
Q  340 tgttgcgaattcgtcggaaaatcacaccaataac-aacttgatgtgtgga 388  Q
    |||||||||||||  | ||||||||||||||||| |||||||||||||||    
T  18840022 tgttgcgaattcgatgaaaaatcacaccaataacaaacttgatgtgtgga 18839973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 388
Target Start/End: Complemental strand, 39462956 - 39462907
Alignment:
Q  340 tgttgcgaattcgtcggaaaatcacaccaataac-aacttgatgtgtgga 388  Q
    |||||||||||||  | ||||||||||||||||| |||||||||||||||    
T  39462956 tgttgcgaattcgatgaaaaatcacaccaataacaaacttgatgtgtgga 39462907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 388
Target Start/End: Complemental strand, 20302864 - 20302832
Alignment:
Q  356 gaaaatcacaccaataacaacttgatgtgtgga 388  Q
    |||||||||||||||||||||||||||| ||||    
T  20302864 gaaaatcacaccaataacaacttgatgtctgga 20302832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 388
Target Start/End: Complemental strand, 28842916 - 28842884
Alignment:
Q  356 gaaaatcacaccaataacaacttgatgtgtgga 388  Q
    ||||||||||| |||||||||||||||||||||    
T  28842916 gaaaatcacactaataacaacttgatgtgtgga 28842884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 388
Target Start/End: Complemental strand, 31490345 - 31490297
Alignment:
Q  340 tgttgcgaattcgtcggaaaatcacaccaataacaacttgatgtgtgga 388  Q
    |||||||||||||  | |||||||||||||||  |||||||||||||||    
T  31490345 tgttgcgaattcgatgaaaaatcacaccaatacaaacttgatgtgtgga 31490297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 388
Target Start/End: Original strand, 31735365 - 31735413
Alignment:
Q  340 tgttgcgaattcgtcggaaaatcacaccaataacaacttgatgtgtgga 388  Q
    |||||||||||||  |  |||| ||||||||||||||||||||||||||    
T  31735365 tgttgcgaattcgatgagaaattacaccaataacaacttgatgtgtgga 31735413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 388
Target Start/End: Complemental strand, 51757973 - 51757925
Alignment:
Q  340 tgttgcgaattcgtcggaaaatcacaccaataacaacttgatgtgtgga 388  Q
    ||||| |||||||  | ||||| ||||||||||||||||||||||||||    
T  51757973 tgttgtgaattcgatgaaaaatgacaccaataacaacttgatgtgtgga 51757925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 34; Significance: 0.0000000006; HSPs: 2)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 339 - 388
Target Start/End: Complemental strand, 29617 - 29569
Alignment:
Q  339 ctgttgcgaattcgtcggaaaatcacaccaataacaacttgatgtgtgga 388  Q
    ||||||||||||||  | ||||||||||||||||||||||||||||||||    
T  29617 ctgttgcgaattcgatg-aaaatcacaccaataacaacttgatgtgtgga 29569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 29534 - 29498
Alignment:
Q  385 tggaataattaaatacaagccaaaagtagaaaacaac 421  Q
    ||||| ||||||||| |||||||||||||||||||||    
T  29534 tggaacaattaaataaaagccaaaagtagaaaacaac 29498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 34; Significance: 0.0000000006; HSPs: 4)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 380 - 421
Target Start/End: Original strand, 183560 - 183601
Alignment:
Q  380 atgtgtggaataattaaatacaagccaaaagtagaaaacaac 421  Q
    |||| ||||| |||||||||||||||||||||||||||||||    
T  183560 atgtatggaacaattaaatacaagccaaaagtagaaaacaac 183601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 358 - 388
Target Start/End: Original strand, 183500 - 183530
Alignment:
Q  358 aaatcacaccaataacaacttgatgtgtgga 388  Q
    |||||||||||||||||||||||||||||||    
T  183500 aaatcacaccaataacaacttgatgtgtgga 183530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 388
Target Start/End: Complemental strand, 50457 - 50408
Alignment:
Q  340 tgttgcgaattcgtcggaaaatcacaccaataac-aacttgatgtgtgga 388  Q
    |||||||||||||  | ||||||||||||||||| |||||||||||||||    
T  50457 tgttgcgaattcgatgaaaaatcacaccaataacaaacttgatgtgtgga 50408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 388
Target Start/End: Complemental strand, 52456 - 52407
Alignment:
Q  340 tgttgcgaattcgtcggaaaatcacaccaataac-aacttgatgtgtgga 388  Q
    |||||||||||||  | ||||||||||||||||| |||||||||||||||    
T  52456 tgttgcgaattcgatgaaaaatcacaccaataacaaacttgatgtgtgga 52407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 34; Significance: 0.0000000006; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 340 - 389
Target Start/End: Original strand, 45332020 - 45332069
Alignment:
Q  340 tgttgcgaattcgtcggaaaatcacaccaataacaacttgatgtgtggaa 389  Q
    ||||| |||||||  | |||||||||||||||||||||||||||||||||    
T  45332020 tgttgtgaattcgatgaaaaatcacaccaataacaacttgatgtgtggaa 45332069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 13909969 - 13910005
Alignment:
Q  385 tggaataattaaatacaagccaaaagtagaaaacaac 421  Q
    ||||| |||||||||||||||||||||||||||||||    
T  13909969 tggaacaattaaatacaagccaaaagtagaaaacaac 13910005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 356 - 388
Target Start/End: Original strand, 19501858 - 19501890
Alignment:
Q  356 gaaaatcacaccaataacaacttgatgtgtgga 388  Q
    |||||||||||||||||||||||||||||||||    
T  19501858 gaaaatcacaccaataacaacttgatgtgtgga 19501890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 356 - 388
Target Start/End: Original strand, 19504193 - 19504225
Alignment:
Q  356 gaaaatcacaccaataacaacttgatgtgtgga 388  Q
    |||||||||||||||||||||||||||||||||    
T  19504193 gaaaatcacaccaataacaacttgatgtgtgga 19504225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 356 - 388
Target Start/End: Original strand, 23452093 - 23452125
Alignment:
Q  356 gaaaatcacaccaataacaacttgatgtgtgga 388  Q
    |||||||||||||||||||||||||||||||||    
T  23452093 gaaaatcacaccaataacaacttgatgtgtgga 23452125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 35217893 - 35217929
Alignment:
Q  385 tggaataattaaatacaagccaaaagtagaaaacaac 421  Q
    ||||||||||||||||||| |||||||||||||||||    
T  35217893 tggaataattaaatacaagtcaaaagtagaaaacaac 35217929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 340 - 388
Target Start/End: Original strand, 36560981 - 36561029
Alignment:
Q  340 tgttgcgaattcgtcggaaaatcacaccaataacaacttgatgtgtgga 388  Q
    ||||| |||||||  | ||||||||||||||||||||||||||||||||    
T  36560981 tgttgtgaattcgatgaaaaatcacaccaataacaacttgatgtgtgga 36561029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 356 - 388
Target Start/End: Complemental strand, 42453875 - 42453843
Alignment:
Q  356 gaaaatcacaccaataacaacttgatgtgtgga 388  Q
    |||||||||||||||||||||||||||||||||    
T  42453875 gaaaatcacaccaataacaacttgatgtgtgga 42453843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 45279925 - 45279961
Alignment:
Q  385 tggaataattaaatacaagccaaaagtagaaaacaac 421  Q
    ||||| |||||||||||||||||||||||||||||||    
T  45279925 tggaacaattaaatacaagccaaaagtagaaaacaac 45279961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 357 - 388
Target Start/End: Original strand, 35215450 - 35215481
Alignment:
Q  357 aaaatcacaccaataacaacttgatgtgtgga 388  Q
    ||||||||||||||||||||||||||||||||    
T  35215450 aaaatcacaccaataacaacttgatgtgtgga 35215481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 357 - 388
Target Start/End: Original strand, 35217827 - 35217858
Alignment:
Q  357 aaaatcacaccaataacaacttgatgtgtgga 388  Q
    ||||||||||||||||||||||||||||||||    
T  35217827 aaaatcacaccaataacaacttgatgtgtgga 35217858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 391 - 421
Target Start/End: Original strand, 24162153 - 24162183
Alignment:
Q  391 aattaaatacaagccaaaagtagaaaacaac 421  Q
    |||||||||||||||||||||||||||||||    
T  24162153 aattaaatacaagccaaaagtagaaaacaac 24162183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 388
Target Start/End: Original strand, 45279844 - 45279890
Alignment:
Q  342 ttgcgaattcgtcggaaaatcacaccaataacaacttgatgtgtgga 388  Q
    |||||||||||  |  |||||||||||||||||||||||||||||||    
T  45279844 ttgcgaattcgatgagaaatcacaccaataacaacttgatgtgtgga 45279890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 388 - 421
Target Start/End: Original strand, 35215519 - 35215552
Alignment:
Q  388 aataattaaatacaagccaaaagtagaaaacaac 421  Q
    |||||||||||||||| |||||||||||||||||    
T  35215519 aataattaaatacaagtcaaaagtagaaaacaac 35215552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 388
Target Start/End: Original strand, 43623423 - 43623472
Alignment:
Q  340 tgttgcgaattcgtcggaaaatcacaccaataac-aacttgatgtgtgga 388  Q
    |||||||||||||  | ||||||||||||||||| |||||||||||||||    
T  43623423 tgttgcgaattcgatgaaaaatcacaccaataactaacttgatgtgtgga 43623472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 23452161 - 23452197
Alignment:
Q  385 tggaataattaaatacaagccaaaagtagaaaacaac 421  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  23452161 tggaacaattaaatacaagctaaaagtagaaaacaac 23452197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 388
Target Start/End: Original strand, 24162084 - 24162112
Alignment:
Q  360 atcacaccaataacaacttgatgtgtgga 388  Q
    |||||||||||||||||||||||||||||    
T  24162084 atcacaccaataacaacttgatgtgtgga 24162112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 27105128 - 27105092
Alignment:
Q  385 tggaataattaaatacaagccaaaagtagaaaacaac 421  Q
    ||||| |||||||| ||||||||||||||||||||||    
T  27105128 tggaacaattaaatgcaagccaaaagtagaaaacaac 27105092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 388
Target Start/End: Original strand, 36558721 - 36558769
Alignment:
Q  340 tgttgcgaattcgtcggaaaatcacaccaataacaacttgatgtgtgga 388  Q
    ||||| |||||||  | |||||||||||||||| |||||||||||||||    
T  36558721 tgttgtgaattcgatgaaaaatcacaccaataataacttgatgtgtgga 36558769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 42064829 - 42064793
Alignment:
Q  385 tggaataattaaatacaagccaaaagtagaaaacaac 421  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  42064829 tggaacaattaaatacaagcaaaaagtagaaaacaac 42064793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1674 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold1674
Description:

Target: scaffold1674; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 1375 - 1411
Alignment:
Q  385 tggaataattaaatacaagccaaaagtagaaaacaac 421  Q
    ||||| |||||||||||||||||||||||||||||||    
T  1375 tggaacaattaaatacaagccaaaagtagaaaacaac 1411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1674; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 357 - 388
Target Start/End: Original strand, 1309 - 1340
Alignment:
Q  357 aaaatcacaccaataacaacttgatgtgtgga 388  Q
    ||||||||||||||||||||||||||||||||    
T  1309 aaaatcacaccaataacaacttgatgtgtgga 1340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 340 - 388
Target Start/End: Complemental strand, 6646 - 6598
Alignment:
Q  340 tgttgcgaattcgtcggaaaatcacaccaataacaacttgatgtgtgga 388  Q
    ||||| |||||||  | ||||||||||||||||||||||||||||||||    
T  6646 tgttgtgaattcgatgaaaaatcacaccaataacaacttgatgtgtgga 6598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 6562 - 6527
Alignment:
Q  385 tggaataattaaatacaagccaaaagtagaaaacaac 421  Q
    ||||||||| |||||||||||||||||||||||||||    
T  6562 tggaataat-aaatacaagccaaaagtagaaaacaac 6527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0267 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 340 - 388
Target Start/End: Complemental strand, 473 - 425
Alignment:
Q  340 tgttgcgaattcgtcggaaaatcacaccaataacaacttgatgtgtgga 388  Q
    ||||| |||||||| |  |||||||||||||||||||||||||||||||    
T  473 tgttgtgaattcgttgagaaatcacaccaataacaacttgatgtgtgga 425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0267; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 417
Target Start/End: Complemental strand, 389 - 357
Alignment:
Q  385 tggaataattaaatacaagccaaaagtagaaaa 417  Q
    ||||| |||||||||||||||||||||||||||    
T  389 tggaacaattaaatacaagccaaaagtagaaaa 357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 356 - 388
Target Start/End: Complemental strand, 3310 - 3278
Alignment:
Q  356 gaaaatcacaccaataacaacttgatgtgtgga 388  Q
    |||||||||||||||||||||||||||||||||    
T  3310 gaaaatcacaccaataacaacttgatgtgtgga 3278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 356 - 388
Target Start/End: Original strand, 14246 - 14278
Alignment:
Q  356 gaaaatcacaccaataacaacttgatgtgtgga 388  Q
    |||||||||||||||||||||||||||||||||    
T  14246 gaaaatcacaccaataacaacttgatgtgtgga 14278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 356 - 388
Target Start/End: Original strand, 41340 - 41372
Alignment:
Q  356 gaaaatcacaccaataacaacttgatgtgtgga 388  Q
    |||||||||||||||||||||||||||||||||    
T  41340 gaaaatcacaccaataacaacttgatgtgtgga 41372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 41407 - 41443
Alignment:
Q  385 tggaataattaaatacaagccaaaagtagaaaacaac 421  Q
    ||||| |||||||||||||||||||||||||||||||    
T  41407 tggaacaattaaatacaagccaaaagtagaaaacaac 41443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1899 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold1899
Description:

Target: scaffold1899; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 357 - 388
Target Start/End: Complemental strand, 45 - 14
Alignment:
Q  357 aaaatcacaccaataacaacttgatgtgtgga 388  Q
    ||||||||||||||||||||||||||||||||    
T  45 aaaatcacaccaataacaacttgatgtgtgga 14  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0891 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0891
Description:

Target: scaffold0891; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 385 - 420
Target Start/End: Original strand, 4601 - 4636
Alignment:
Q  385 tggaataattaaatacaagccaaaagtagaaaacaa 420  Q
    ||||| ||||||||||||||||||||||||||||||    
T  4601 tggaacaattaaatacaagccaaaagtagaaaacaa 4636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0370 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0370
Description:

Target: scaffold0370; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 357 - 388
Target Start/End: Original strand, 1310 - 1341
Alignment:
Q  357 aaaatcacaccaataacaacttgatgtgtgga 388  Q
    ||||||||||||||||||||||||||||||||    
T  1310 aaaatcacaccaataacaacttgatgtgtgga 1341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 388
Target Start/End: Original strand, 11335 - 11363
Alignment:
Q  360 atcacaccaataacaacttgatgtgtgga 388  Q
    |||||||||||||||||||||||||||||    
T  11335 atcacaccaataacaacttgatgtgtgga 11363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 388
Target Start/End: Original strand, 12715 - 12763
Alignment:
Q  340 tgttgcgaattcgtcggaaaatcacaccaataacaacttgatgtgtgga 388  Q
    ||||| |||||||  | ||||| ||||||||||||||||||||||||||    
T  12715 tgttgtgaattcgatgaaaaatgacaccaataacaacttgatgtgtgga 12763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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